View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3605_high_21 (Length: 402)

Name: NF3605_high_21
Description: NF3605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3605_high_21
NF3605_high_21
[»] chr3 (51 HSPs)
chr3 (1-391)||(44591980-44592374)
chr3 (266-373)||(51017788-51017895)
chr3 (264-370)||(40160736-40160843)
chr3 (274-364)||(23237369-23237460)
chr3 (253-370)||(24160503-24160622)
chr3 (254-370)||(24130560-24130678)
chr3 (264-356)||(6054212-6054305)
chr3 (264-370)||(4010005-4010112)
chr3 (264-364)||(21248977-21249077)
chr3 (274-370)||(28951867-28951964)
chr3 (268-364)||(32080062-32080159)
chr3 (264-364)||(43774191-43774291)
chr3 (325-370)||(16874239-16874284)
chr3 (282-370)||(42665930-42666019)
chr3 (264-370)||(47191373-47191479)
chr3 (254-364)||(51493604-51493717)
chr3 (330-370)||(30745785-30745825)
chr3 (267-370)||(34407080-34407184)
chr3 (274-360)||(4045631-4045718)
chr3 (264-370)||(4478355-4478462)
chr3 (324-379)||(12236591-12236646)
chr3 (264-354)||(27119293-27119384)
chr3 (330-364)||(12143461-12143495)
chr3 (263-372)||(36842161-36842271)
chr3 (332-378)||(38507641-38507687)
chr3 (264-374)||(43911611-43911714)
chr3 (325-370)||(3973303-3973348)
chr3 (325-370)||(3996528-3996573)
chr3 (291-370)||(14868685-14868766)
chr3 (325-370)||(19137620-19137665)
chr3 (264-370)||(36331715-36331821)
chr3 (269-369)||(794001-794101)
chr3 (254-370)||(3461699-3461818)
chr3 (253-300)||(38571397-38571445)
chr3 (308-360)||(51412022-51412074)
chr3 (320-370)||(6951834-6951884)
chr3 (331-373)||(23305744-23305786)
chr3 (325-370)||(3993756-3993801)
chr3 (291-370)||(9624983-9625064)
chr3 (291-370)||(27183695-27183776)
chr3 (255-303)||(49299217-49299266)
chr3 (264-375)||(49639024-49639134)
chr3 (277-358)||(53670329-53670409)
chr3 (264-370)||(7020775-7020883)
chr3 (288-375)||(16277962-16278050)
chr3 (274-302)||(17262289-17262317)
chr3 (290-345)||(28962990-28963046)
chr3 (331-375)||(31917922-31917966)
chr3 (334-378)||(46416281-46416325)
chr3 (255-302)||(47497148-47497196)
chr3 (282-366)||(48894104-48894188)
[»] chr1 (54 HSPs)
chr1 (264-370)||(9768796-9768903)
chr1 (253-370)||(18003817-18003935)
chr1 (264-364)||(3341723-3341824)
chr1 (264-361)||(2903014-2903112)
chr1 (267-370)||(48260179-48260283)
chr1 (264-370)||(41677061-41677168)
chr1 (264-361)||(50199463-50199561)
chr1 (263-371)||(9769566-9769675)
chr1 (264-378)||(47645789-47645898)
chr1 (268-370)||(11238019-11238122)
chr1 (264-370)||(42908772-42908879)
chr1 (268-370)||(1721141-1721244)
chr1 (264-370)||(18179329-18179436)
chr1 (264-370)||(43020612-43020719)
chr1 (264-363)||(12553201-12553302)
chr1 (276-370)||(52961081-52961176)
chr1 (254-370)||(195045-195163)
chr1 (264-361)||(4511512-4511610)
chr1 (264-369)||(23750152-23750258)
chr1 (254-302)||(33844687-33844736)
chr1 (254-302)||(33949242-33949291)
chr1 (308-361)||(47141838-47141891)
chr1 (268-364)||(50575908-50576005)
chr1 (291-377)||(47763399-47763487)
chr1 (263-376)||(7015672-7015787)
chr1 (321-370)||(9527426-9527476)
chr1 (331-364)||(5862135-5862168)
chr1 (254-302)||(19866545-19866594)
chr1 (291-370)||(29491470-29491551)
chr1 (263-345)||(11405482-11405563)
chr1 (264-370)||(7906313-7906420)
chr1 (286-379)||(18234336-18234428)
chr1 (292-370)||(43327011-43327090)
chr1 (331-370)||(49632294-49632333)
chr1 (254-370)||(9931088-9931206)
chr1 (264-302)||(9976371-9976409)
chr1 (254-299)||(27684647-27684693)
chr1 (325-379)||(33176152-33176206)
chr1 (253-298)||(35424214-35424260)
chr1 (331-360)||(3569055-3569084)
chr1 (254-302)||(23973458-23973507)
chr1 (269-302)||(27654997-27655030)
chr1 (291-370)||(38021252-38021333)
chr1 (274-358)||(38028550-38028635)
chr1 (255-370)||(52765707-52765824)
chr1 (255-302)||(3797925-3797972)
chr1 (263-370)||(4288589-4288697)
chr1 (264-370)||(4429471-4429576)
chr1 (324-364)||(5684129-5684169)
chr1 (330-370)||(9004347-9004387)
chr1 (258-345)||(31965538-31965626)
chr1 (313-357)||(34870318-34870362)
chr1 (330-370)||(37262159-37262199)
chr1 (330-369)||(47939252-47939292)
[»] chr6 (32 HSPs)
chr6 (253-370)||(34524876-34524994)
chr6 (267-379)||(30833009-30833122)
chr6 (256-370)||(30668162-30668278)
chr6 (254-374)||(4844140-4844262)
chr6 (254-370)||(26669635-26669753)
chr6 (263-359)||(19680234-19680331)
chr6 (264-375)||(35190759-35190869)
chr6 (330-374)||(8309161-8309205)
chr6 (264-380)||(10455733-10455851)
chr6 (264-370)||(14949006-14949114)
chr6 (282-356)||(7374055-7374130)
chr6 (321-370)||(2945596-2945646)
chr6 (330-364)||(9031773-9031807)
chr6 (263-375)||(9422829-9422943)
chr6 (262-370)||(22730686-22730796)
chr6 (264-375)||(12089093-12089203)
chr6 (324-361)||(20858431-20858468)
chr6 (265-301)||(1395578-1395614)
chr6 (274-361)||(1488098-1488186)
chr6 (282-362)||(8253596-8253676)
chr6 (264-370)||(12127898-12128003)
chr6 (267-302)||(7234035-7234070)
chr6 (274-370)||(8175997-8176095)
chr6 (330-364)||(17176156-17176190)
chr6 (264-302)||(32372514-32372552)
chr6 (274-369)||(20149976-20150073)
chr6 (274-369)||(22182759-22182856)
chr6 (282-370)||(31639142-31639231)
chr6 (332-364)||(6219361-6219393)
chr6 (325-380)||(14981751-14981807)
chr6 (321-361)||(17347265-17347305)
chr6 (330-370)||(19135930-19135970)
[»] chr5 (46 HSPs)
chr5 (264-370)||(11246481-11246588)
chr5 (264-374)||(38040263-38040373)
chr5 (264-364)||(31556825-31556926)
chr5 (268-379)||(27006332-27006444)
chr5 (255-377)||(31280357-31280480)
chr5 (264-365)||(37986854-37986956)
chr5 (264-360)||(28768608-28768705)
chr5 (254-362)||(20186875-20186983)
chr5 (264-370)||(3535923-3536030)
chr5 (254-362)||(34325274-34325384)
chr5 (274-370)||(42553138-42553234)
chr5 (267-370)||(41405078-41405182)
chr5 (308-364)||(42781626-42781682)
chr5 (308-374)||(9408982-9409049)
chr5 (264-370)||(13862126-13862232)
chr5 (264-375)||(18872517-18872625)
chr5 (264-370)||(28537136-28537243)
chr5 (267-370)||(6806632-6806735)
chr5 (264-364)||(42455383-42455482)
chr5 (282-370)||(17557031-17557119)
chr5 (325-370)||(25660913-25660958)
chr5 (264-375)||(32158403-32158513)
chr5 (325-370)||(35813291-35813336)
chr5 (282-370)||(40250182-40250271)
chr5 (267-370)||(7147009-7147113)
chr5 (264-343)||(38129000-38129080)
chr5 (253-366)||(8018591-8018706)
chr5 (267-369)||(10106632-10106735)
chr5 (264-346)||(17137854-17137937)
chr5 (282-360)||(31907662-31907741)
chr5 (263-302)||(40384321-40384360)
chr5 (269-374)||(19608610-19608716)
chr5 (264-302)||(22687868-22687906)
chr5 (321-375)||(36742012-36742066)
chr5 (291-370)||(1463871-1463952)
chr5 (304-364)||(3102155-3102216)
chr5 (291-370)||(4674829-4674910)
chr5 (324-364)||(9963422-9963463)
chr5 (253-301)||(18535985-18536034)
chr5 (325-377)||(37417178-37417231)
chr5 (264-371)||(41539316-41539422)
chr5 (263-347)||(42260706-42260791)
chr5 (332-364)||(17178278-17178310)
chr5 (264-370)||(29096297-29096402)
chr5 (332-364)||(31280602-31280634)
chr5 (274-302)||(39955071-39955099)
[»] chr4 (51 HSPs)
chr4 (264-370)||(20610740-20610847)
chr4 (256-361)||(12585537-12585644)
chr4 (264-370)||(49039432-49039539)
chr4 (254-370)||(54854155-54854273)
chr4 (264-370)||(49319394-49319502)
chr4 (264-377)||(33076526-33076637)
chr4 (264-370)||(41492486-41492592)
chr4 (254-358)||(23226681-23226787)
chr4 (267-370)||(24039889-24039989)
chr4 (263-370)||(36008275-36008382)
chr4 (264-370)||(33359818-33359925)
chr4 (264-377)||(27921890-27922004)
chr4 (282-370)||(56865-56954)
chr4 (264-364)||(21023339-21023439)
chr4 (254-369)||(35230271-35230388)
chr4 (254-369)||(49743364-49743481)
chr4 (263-370)||(1589144-1589251)
chr4 (304-370)||(2565261-2565328)
chr4 (264-370)||(42758151-42758257)
chr4 (265-375)||(54264924-54265035)
chr4 (282-361)||(18740921-18741002)
chr4 (321-373)||(9084756-9084809)
chr4 (325-370)||(20166317-20166362)
chr4 (254-370)||(4419662-4419780)
chr4 (264-374)||(21664076-21664186)
chr4 (264-374)||(21672840-21672950)
chr4 (264-370)||(12820394-12820500)
chr4 (264-377)||(31480264-31480377)
chr4 (330-362)||(38657549-38657581)
chr4 (264-363)||(51077875-51077974)
chr4 (321-380)||(52031197-52031257)
chr4 (264-370)||(15185079-15185186)
chr4 (291-380)||(28520745-28520836)
chr4 (330-361)||(42432018-42432049)
chr4 (344-378)||(31852345-31852379)
chr4 (324-370)||(36045831-36045877)
chr4 (325-370)||(48512199-48512245)
chr4 (271-364)||(52556669-52556763)
chr4 (301-375)||(55266460-55266534)
chr4 (264-301)||(4153245-4153282)
chr4 (291-370)||(8690214-8690295)
chr4 (330-371)||(17431377-17431418)
chr4 (264-375)||(20753114-20753224)
chr4 (282-370)||(29785151-29785240)
chr4 (263-370)||(32885689-32885795)
chr4 (330-375)||(43049987-43050032)
chr4 (331-380)||(44449522-44449571)
chr4 (264-370)||(17859779-17859884)
chr4 (266-377)||(32887125-32887237)
chr4 (264-370)||(36257695-36257800)
chr4 (334-378)||(40261177-40261221)
[»] chr8 (38 HSPs)
chr8 (253-377)||(220337-220463)
chr8 (253-377)||(689492-689618)
chr8 (253-377)||(733960-734086)
chr8 (253-377)||(857856-857982)
chr8 (275-377)||(216145-216248)
chr8 (275-377)||(692705-692808)
chr8 (275-377)||(696914-697017)
chr8 (275-377)||(729768-729871)
chr8 (275-377)||(853663-853766)
chr8 (264-370)||(14011025-14011132)
chr8 (265-358)||(22847250-22847344)
chr8 (277-370)||(18577114-18577208)
chr8 (274-358)||(26773699-26773784)
chr8 (270-370)||(28979027-28979128)
chr8 (274-377)||(7345422-7345526)
chr8 (254-370)||(26657857-26657975)
chr8 (254-373)||(12560030-12560150)
chr8 (264-352)||(44254299-44254388)
chr8 (313-364)||(32940351-32940402)
chr8 (324-370)||(39432376-39432422)
chr8 (263-364)||(11900573-11900674)
chr8 (324-377)||(16808409-16808462)
chr8 (313-370)||(29937211-29937268)
chr8 (283-339)||(574257-574313)
chr8 (264-357)||(30542777-30542870)
chr8 (254-301)||(39208845-39208893)
chr8 (274-340)||(19925096-19925163)
chr8 (264-370)||(25470833-25470940)
chr8 (264-302)||(6325339-6325377)
chr8 (263-370)||(14012612-14012719)
chr8 (264-364)||(17987438-17987537)
chr8 (263-301)||(27821891-27821929)
chr8 (291-370)||(2800019-2800100)
chr8 (264-375)||(43468694-43468804)
chr8 (263-358)||(30500481-30500576)
chr8 (321-364)||(35301208-35301252)
chr8 (332-364)||(36593201-36593233)
chr8 (325-373)||(39208910-39208958)
[»] chr7 (50 HSPs)
chr7 (264-364)||(10020456-10020557)
chr7 (254-370)||(7392282-7392400)
chr7 (263-364)||(35195850-35195952)
chr7 (254-375)||(11808034-11808158)
chr7 (264-370)||(44409202-44409308)
chr7 (274-370)||(41012577-41012675)
chr7 (276-363)||(9351042-9351130)
chr7 (255-357)||(32309125-32309229)
chr7 (253-370)||(32814828-32814947)
chr7 (254-370)||(43635589-43635707)
chr7 (264-370)||(21285342-21285448)
chr7 (264-370)||(1649153-1649260)
chr7 (274-356)||(7162665-7162748)
chr7 (291-364)||(20527443-20527518)
chr7 (263-377)||(38328553-38328667)
chr7 (263-372)||(43712299-43712409)
chr7 (264-360)||(1513498-1513594)
chr7 (330-370)||(17305444-17305484)
chr7 (274-364)||(16814704-16814795)
chr7 (264-302)||(26734258-26734296)
chr7 (264-361)||(35498408-35498505)
chr7 (267-364)||(48174974-48175071)
chr7 (308-377)||(7465460-7465529)
chr7 (278-374)||(21877673-21877769)
chr7 (264-370)||(29658261-29658367)
chr7 (321-374)||(32534630-32534683)
chr7 (264-370)||(38451863-38451969)
chr7 (291-370)||(41139087-41139168)
chr7 (264-351)||(5773149-5773239)
chr7 (330-370)||(8147240-8147280)
chr7 (265-364)||(19924774-19924874)
chr7 (321-361)||(23799310-23799350)
chr7 (255-302)||(24579263-24579311)
chr7 (274-370)||(25304179-25304275)
chr7 (331-370)||(3246541-3246580)
chr7 (279-361)||(24427373-24427456)
chr7 (323-370)||(37410528-37410575)
chr7 (264-373)||(46716331-46716439)
chr7 (321-370)||(14818410-14818460)
chr7 (321-370)||(15265408-15265458)
chr7 (263-375)||(25818282-25818393)
chr7 (274-311)||(28968680-28968718)
chr7 (263-344)||(41853511-41853593)
chr7 (319-361)||(43209411-43209453)
chr7 (263-370)||(30152742-30152848)
chr7 (325-377)||(31475889-31475942)
chr7 (332-361)||(38032911-38032940)
chr7 (283-370)||(10474518-10474606)
chr7 (282-377)||(14772341-14772436)
chr7 (282-377)||(15222793-15222888)
[»] chr2 (48 HSPs)
chr2 (264-370)||(1244570-1244677)
chr2 (263-362)||(14307680-14307780)
chr2 (262-364)||(44487752-44487855)
chr2 (264-364)||(12206505-12206606)
chr2 (254-377)||(39334857-39334982)
chr2 (264-370)||(39118394-39118501)
chr2 (263-348)||(4529749-4529835)
chr2 (264-370)||(11133076-11133182)
chr2 (267-351)||(36413780-36413865)
chr2 (264-370)||(5029087-5029194)
chr2 (274-364)||(32944069-32944160)
chr2 (254-370)||(34107275-34107393)
chr2 (274-370)||(2057482-2057577)
chr2 (274-370)||(18065255-18065352)
chr2 (313-370)||(20684272-20684329)
chr2 (266-361)||(40471163-40471259)
chr2 (264-357)||(10602019-10602114)
chr2 (264-370)||(18089730-18089837)
chr2 (254-359)||(20942085-20942192)
chr2 (264-370)||(26975286-26975392)
chr2 (264-379)||(29664594-29664709)
chr2 (321-371)||(36386158-36386208)
chr2 (340-377)||(17896819-17896856)
chr2 (266-370)||(22355084-22355189)
chr2 (264-370)||(41195931-41196037)
chr2 (274-370)||(407480-407576)
chr2 (313-376)||(2935811-2935875)
chr2 (271-370)||(31088991-31089091)
chr2 (282-356)||(20972826-20972901)
chr2 (331-370)||(36277757-36277796)
chr2 (321-364)||(44132608-44132651)
chr2 (253-356)||(10767002-10767108)
chr2 (264-365)||(29713076-29713178)
chr2 (264-302)||(32677399-32677437)
chr2 (330-360)||(34376553-34376583)
chr2 (325-379)||(35352459-35352513)
chr2 (255-348)||(36345158-36345252)
chr2 (274-375)||(37065431-37065533)
chr2 (264-302)||(41305053-41305091)
chr2 (325-370)||(5772861-5772906)
chr2 (331-364)||(6496446-6496479)
chr2 (276-360)||(6649959-6650041)
chr2 (301-370)||(24586648-24586717)
chr2 (313-370)||(30876951-30877008)
chr2 (254-302)||(35352380-35352429)
chr2 (274-302)||(2394970-2394998)
chr2 (264-361)||(3037611-3037708)
chr2 (274-302)||(5807764-5807792)
[»] scaffold0168 (1 HSPs)
scaffold0168 (264-370)||(34020-34127)
[»] scaffold0119 (1 HSPs)
scaffold0119 (254-370)||(1040-1158)
[»] scaffold2098 (1 HSPs)
scaffold2098 (288-364)||(625-702)
[»] scaffold0002 (1 HSPs)
scaffold0002 (264-364)||(440406-440507)
[»] scaffold0712 (1 HSPs)
scaffold0712 (323-370)||(4521-4568)
[»] scaffold0709 (1 HSPs)
scaffold0709 (323-370)||(4541-4588)
[»] scaffold0118 (1 HSPs)
scaffold0118 (264-377)||(37315-37429)
[»] scaffold0054 (1 HSPs)
scaffold0054 (263-371)||(67161-67270)
[»] scaffold0013 (1 HSPs)
scaffold0013 (304-374)||(245484-245554)
[»] scaffold0129 (1 HSPs)
scaffold0129 (265-351)||(7076-7163)
[»] scaffold0229 (1 HSPs)
scaffold0229 (288-341)||(22454-22507)
[»] scaffold0011 (1 HSPs)
scaffold0011 (274-358)||(19392-19477)
[»] scaffold0070 (2 HSPs)
scaffold0070 (323-370)||(12565-12613)
scaffold0070 (198-238)||(14394-14434)


Alignment Details
Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 391
Target Start/End: Complemental strand, 44592374 - 44591980
Alignment:
Q  1 aacagcaagcaattgacaacacaatggaaatattagatggcacttggctcaa----attgacgtgggttgctgcaccaacgcaaaatggaggaaatgttt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||     
T  44592374 aacagcaagcaattgacaacacaatggaaatattagatggcacttggctcaagtacattgacgtgggttgctgcaccaacgcaaaatggaggaaatgttc 44592275  T
Q  97 gtgtctatcaaatctcaactttgacatttcacatttgtgaatgcaacaattgattcatttcacattttttaaatcttcattgctccgtctatcaatatat 196  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  44592274 gtgtctatcaaatcttaaatttgacatttcacatttgtgaatgcaacaattgattcatttcacatttttgaaatcttcattggtccgtctatcaatatat 44592175  T
Q  197 attttttaaaaaaggaaccaaatcaaactaactagtttggatcgattcannnnnnnggtcaagtagttagtggctataattcacctttttcaaggtgaat 296  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||       |||||||||| |||||||||||||||||||||||||||||||||    
T  44592174 attttttaaaaaaggaaccaaattaaactaactagtttggatcgatccatttttttggtcaagtagctagtggctataattcacctttttcaaggtgaat 44592075  T
Q  297 aagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaacttggatcgattcat 391  Q
    |||| ||||||||||||| || ||| |||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |||||    
T  44592074 aagtagatgttcgggttttgaactctgacccctgcatataacaatgcatgttcctaccaactgagctaagctcacgggaacttggatcggttcat 44591980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 266 - 373
Target Start/End: Complemental strand, 51017895 - 51017788
Alignment:
Q  266 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||| ||||||| |||||||| ||||||||||||  ||| |||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  51017895 gtggctagaattcacttttttcaaagtgaataagtggggtgtccgggtt-cgaactccgactcctgcatataacaatgcatgtccctgccaactgagcta 51017797  T
Q  365 agctcatgg 373  Q
      |||||||    
T  51017796 tactcatgg 51017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 40160843 - 40160736
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||| |||||||||||||||  ||| |||| ||| | | ||  |||||||||||||||||||||||||||||||| |||||    
T  40160843 tagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccccggcatataacaatgcatgtccctgccaattgagc 40160744  T
Q  363 taagctca 370  Q
    || |||||    
T  40160743 tatgctca 40160736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 23237460 - 23237369
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||||||||||||||| ||||||| |||| |||| |||  ||||| ||||||||||  ||||||| ||||||||||||||||||||||||||    
T  23237460 aattcacctttttcaacgtgaatatgtgggatgtccggagttcgaactccgacccctacatataataatgcatgtccctgccaactgagcta 23237369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 24160503 - 24160622
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    ||||||||||| | ||||||| |||||| |||||| || ||||||||||||| ||| |||| ||||| | |||||||| |||||||||| |||||||| |    
T  24160503 ggtcaagtagtctggtggctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctc 24160602  T
Q  351 tgccaactgagctaagctca 370  Q
    ||||||||||| || |||||    
T  24160603 tgccaactgagttatgctca 24160622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 24130678 - 24130560
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| |||||||||  ||||| ||||||||||||||||||||||  ||| |||| ||| | | ||| |||| ||||||||||||| ||||||||    
T  24130678 gtcaagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtccct 24130579  T
Q  352 gccaactgagctaagctca 370  Q
    |||||||||| || |||||    
T  24130578 gccaactgagttatgctca 24130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 6054212 - 6054305
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 356  Q
    |||||| || |||||||||||||||||||||||||||| | |||||||  ||||| |||||||| | |||| ||||||| ||||||||||||||    
T  6054212 tagtggttagaattcacctttttcaaggtgaataagtgaggtgttcggagttcgaactccgacctctgcatctaacaatacatgtccctgccaa 6054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 4010005 - 4010112
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || |||||| | |||||||||||||||| |||  |||||||| ||| | || || |||| |||||||||||||||||||||| ||||||||||    
T  4010005 tagtggttagaattcaacattttcaaggtgaataaatggggtgttcggggttcaaactgcggcccctgcatataacaatgcatgtccctaccaactgagc 4010104  T
Q  363 taagctca 370  Q
    || |||||    
T  4010105 tatgctca 4010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 21248977 - 21249077
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||| || ||||| | ||| |||| |||||||| ||| |||||| ||| |||||||||    
T  21248977 tagtggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaaccccggcccctgcatataataat-catgtctctgtcaactgagc 21249075  T
Q  363 ta 364  Q
    ||    
T  21249076 ta 21249077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 28951964 - 28951867
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||| |||||||||||||||||||||  |||||||| ||||| | | |||||| |||||||| |||||||||  |||||||||||| || |||||    
T  28951964 aattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatgctca 28951867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 32080159 - 32080062
Alignment:
Q  268 ggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| ||||| | |||||||   ||||||| ||| |||| |||||| ||||||||||    
T  32080159 ggctagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacccatacatataataattcatgcccctgcaaactgagcta 32080062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 43774291 - 43774191
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  |||||||||||||||  |||  ||| ||||| | |||||||| ||||||||||||||| |||||||||||||||||    
T  43774291 tagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgag 43774194  T
Q  362 cta 364  Q
    |||    
T  43774193 cta 43774191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 16874239 - 16874284
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  16874239 cccctgcatataacaatgcatgtccctgccaactgagctatgctca 16874284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 42665930 - 42666019
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||||||||||  ||| |||  ||||| |||||||||| |||| ||||||||||| ||| |||||||| || ||||||||    
T  42665930 tttttcaaggtgaataagtggggtgtccggagttcgaactccgacccctgcatttaacaatgcatatccatgccaactaagttaagctca 42666019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 47191479 - 47191373
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 361  Q
    ||||||||| |||||| ||| |  |||||||||||||||  |||||||| ||||| ||||  |||| |||||||| ||||||| ||||||||||||||||    
T  47191479 tagtggctagaattcatcttat--aaggtgaataagtggggtgttcggggttcgaactccagcccctgcatataataatgcattgtccctgccaactgag 47191382  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  47191381 ctatgctca 47191373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 51493717 - 51493604
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| |||||| || ||||||| |||||| |||||| |||||||   ||||||| ||||| | |||||||  ||||| ||||||||||||||||    
T  51493717 gtcaagtagtatagtggttagaattcacttttttcgaggtgattaagtggggcgttcggggttcgaaccccgacccttgcataaaacaatgcatgtccct 51493618  T
Q  352 g-ccaactgagcta 364  Q
    | ||||||||||||    
T  51493617 gcccaactgagcta 51493604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 30745785 - 30745825
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  30745785 gcatataacaatgcatgtccctgccaactgagctatgctca 30745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 370
Target Start/End: Original strand, 34407080 - 34407184
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| |||||| | |||||||| |||||||||||  |||  ||| ||||| | || ||||| |||||||| |||||||||||||||||||||||  ||    
T  34407080 tggctagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgccaactgagtcaa 34407179  T
Q  366 gctca 370  Q
    |||||    
T  34407180 gctca 34407184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 360
Target Start/End: Original strand, 4045631 - 4045718
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    ||||||||||||||||| |||||||||||  ||| ||   ||||| |  ||||||| ||||||||||||||||||||||| |||||||    
T  4045631 aattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtccctgtcaactga 4045718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 4478355 - 4478462
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||| || ||||| ||| ||||||||| |||||| |||| ||||| | |||||||| |||||||| ||||||||| | | | ||||||||    
T  4478355 tagtggctaaaatttacatttttaaagatgaataagtgggatgtccgggattcgaaccccgacccctgcatataataatgcatgttcatactaactgagc 4478454  T
Q  363 taagctca 370  Q
    || |||||    
T  4478455 tatgctca 4478462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 12236646 - 12236591
Alignment:
Q  324 accccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 379  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||| ||| ||||    
T  12236646 acccctgcatataataatgcatgtccctgccaactgagctacgctcacggggactt 12236591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 27119384 - 27119293
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgcc 354  Q
    ||||| ||| ||||| ||||||| ||||  |||||||||  |||||||| ||||| | |||||| | |||||||||||||||||||||||||    
T  27119384 tagtgactagaattctcctttttaaaggaaaataagtggggtgttcgggattcgaaccccgacctctgcatataacaatgcatgtccctgcc 27119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 12143461 - 12143495
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||||||||||||||||||||||||||||||||||    
T  12143461 gcatataacaatgcatgtccctgccaactgagcta 12143495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 36842271 - 36842161
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||| || ||||||| |||||||| |||||||||| |||||| |||| ||||| | |||||||| | || ||| ||||||| |||||  ||||||||    
T  36842271 ttagtggttagaattcacttttttcaaagtgaataagtgggatgtacggggttcgaaccccgacccctgaatttaaaaatgcatatccctatcaactgag 36842172  T
Q  362 ctaagctcatg 372  Q
     || |||||||    
T  36842171 ttatgctcatg 36842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 378
Target Start/End: Complemental strand, 38507687 - 38507641
Alignment:
Q  332 atataacaatgcatgtccctgccaactgagctaagctcatgggaact 378  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||    
T  38507687 atataataatgcatgtccctgccaactgagctatgctcacgggaact 38507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 43911714 - 43911611
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||        | | |||||||| ||||||||||||  ||||| ||||||||| |||    
T  43911714 tagtggcaataattcacatttttcaaggtgaataagtggagtgttc--------agccccgacccctgcatataacaatatatgtctctgccaactaagc 43911623  T
Q  363 taagctcatggg 374  Q
    || |||||||||    
T  43911622 tatgctcatggg 43911611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 3973348 - 3973303
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||    
T  3973348 cccctgcatataacaatgcatgtccctaccaactgagctatgctca 3973303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 3996528 - 3996573
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||    
T  3996528 cccctgcatataacaatgcatgtccctaccaactgagctatgctca 3996573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 14868766 - 14868685
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  |||||||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  14868766 gtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 14868685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 19137665 - 19137620
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||    
T  19137665 cccctgcatataacaatgcatgttcctgccaactgagctatgctca 19137620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 36331715 - 36331821
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 361  Q
    ||||||||| ||||||| ||||  || ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||||||| ||||    
T  36331715 tagtggctagaattcacttttt--aaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaattgag 36331812  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  36331813 ctatgctca 36331821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 369
Target Start/End: Original strand, 794001 - 794101
Alignment:
Q  269 gctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagct 368  Q
    |||| ||||||||| |||||| | |||||||||| ||| |||| |||||   ||| |||| ||||||||||||||||||| ||  || |||||||| |||    
T  794001 gctagaattcacctctttcaaagagaataagtgggtgtccggggttcgaatcccggcccccgcatataacaatgcatgtctctatcagctgagctatgct 794100  T
Q  369 c 369  Q
    |    
T  794101 c 794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 3461699 - 3461818
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    |||||||||| ||| || || |||||||||| |||||  ||||||| |||   |||||||| ||||| | || |||||  ||||||||||||||||||||    
T  3461699 gtcaagtagtctagcggttagaattcaccttattcaaaatgaataaatgggggtgttcggggttcgaaccccaacccctacatataacaatgcatgtccc 3461798  T
Q  351 tgccaactgagctaagctca 370  Q
    || |||||||| || |||||    
T  3461799 tgtcaactgagttatgctca 3461818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 38571397 - 38571445
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagt 300  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  38571397 ggtcaagtagtctagtggctagaattcaccattttcaaggtgaataagt 38571445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 51412022 - 51412074
Alignment:
Q  308 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    |||| ||||| | ||||| || |||||||||||||||||||||||||||||||    
T  51412022 cgggattcgaaccccgactcctgcatataacaatgcatgtccctgccaactga 51412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 6951834 - 6951884
Alignment:
Q  320 tccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||| |||||||| |||||||||||||| |||||||| || |||||    
T  6951834 tccgacccctgcatataataatgcatgtccctgtcaactgagttatgctca 6951884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 23305786 - 23305744
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    ||||||||||||||||||||| ||||||||| || ||||||||    
T  23305786 catataacaatgcatgtccctaccaactgagttatgctcatgg 23305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 3993756 - 3993801
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| ||||||||||||||||||||||  ||||||||||| |||||    
T  3993756 cccctgcatataacaatgcatgtccctctcaactgagctatgctca 3993801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 9625064 - 9624983
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  9625064 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 9624983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Original strand, 27183695 - 27183776
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  27183695 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 27183776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 49299217 - 49299266
Alignment:
Q  255 tcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga 303  Q
    ||||||||| ||||||||| |||||| |||| ||||||||||||||||||    
T  49299217 tcaagtagtctagtggctagaattcagctttctcaaggtgaataagtgga 49299266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 49639134 - 49639024
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||   ||||||||||||||||  |||||||| ||||| | ||| ||||  ||||||| |||||||   ||| ||||||||||    
T  49639134 tagtggctagaattcacctta--caaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagc 49639037  T
Q  363 taagctcatggga 375  Q
    || ||||| ||||    
T  49639036 tatgctcacggga 49639024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 53670329 - 53670409
Alignment:
Q  277 tcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 358  Q
    |||||||||| ||||||| |||| || |||||||| ||||| |||  ||||| ||||||||||||  ||||| |||||||||    
T  53670329 tcaccttttttaaggtgactaagggg-tgttcgggattcgaactcgaacccctgcatataacaatctatgtctctgccaact 53670409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 7020883 - 7020775
Alignment:
Q  264 tagtggctataattcacctttttca-aggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||| |||||||||||| |  |||||||||||| || ||  |||| ||||| | |||||||  | |||||| |||||||||| |||||||||||     
T  7020883 tagtggctagaattcaccttttgctcaggtgaataagttgggtgaccggggttcgaaccccgacccatgtatataataatgcatgtctctgccaactgat 7020784  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  7020783 ctatgctca 7020775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 375
Target Start/End: Original strand, 16277962 - 16278050
Alignment:
Q  288 aaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggga 375  Q
    ||||||||||||||| |||| |||  |||||   |||||||| |||||||| ||||||||  ||| |||||||||||| ||||| ||||    
T  16277962 aaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcatggtcctaccaactgagctatgctcacggga 16278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 17262317 - 17262289
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||||||||||||||||||||||    
T  17262317 aattcacctttttcaaggtgaataagtgg 17262289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 28963046 - 28962990
Alignment:
Q  290 ggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcat 345  Q
    ||||||||||||| ||||||||| ||||| | |||||||| | ||||||||||||||    
T  28963046 ggtgaataagtgggatgttcgggattcgaaccccgacccctgtatataacaatgcat 28962990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 31917922 - 31917966
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagctaagctcatggga 375  Q
    ||||||||||||||||| ||| | |||||||||| ||||||||||    
T  31917922 catataacaatgcatgttcctacaaactgagctatgctcatggga 31917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 46416281 - 46416325
Alignment:
Q  334 ataacaatgcatgtccctgccaactgagctaagctcatgggaact 378  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||||    
T  46416281 ataataatgcatgtccttgccaactgagctatgctcacgggaact 46416325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 47497196 - 47497148
Alignment:
Q  255 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  47497196 tcaagtagtttagtggttaaaattcaccttttttaaggtgaataagtgg 47497148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 366
Target Start/End: Complemental strand, 48894188 - 48894104
Alignment:
Q  282 tttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 366  Q
    ||||| ||||||||||||| | | || | | ||||| ||||||||||   |||||||||||||||| | || |||||||||||||    
T  48894188 ttttttaaggtgaataagttggtatttgaggttcgaactccgacccctatatataacaatgcatgttcttgtcaactgagctaag 48894104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 9768796 - 9768903
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||| |||| |||||||||||||||||||||||||||||  ||| |||| ||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  9768796 tagtagctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagc 9768895  T
Q  363 taagctca 370  Q
    || |||||    
T  9768896 tatgctca 9768903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 370
Target Start/End: Complemental strand, 18003935 - 18003817
Alignment:
Q  253 ggtcaagtagttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||  |||||||| |||||||||||||| ||||||||||||||  ||||||||  |||| | ||| |||| ||||||||||||||||||||||    
T  18003935 ggtcaagtagccagtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccct 18003836  T
Q  352 gccaactgagctaagctca 370  Q
    ||||||||||||| |||||    
T  18003835 gccaactgagctatgctca 18003817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 3341723 - 3341824
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| |||| ||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  3341723 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgccaactgagc 3341822  T
Q  363 ta 364  Q
    ||    
T  3341823 ta 3341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 2903014 - 2903112
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||| | |||||| | ||||||||||||||||||||||| ||||||||    
T  2903014 tagtggctagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtccctggcaactgag 2903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 370
Target Start/End: Original strand, 48260179 - 48260283
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| ||||||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||| ||||||| ||||||  ||||||||||||||||||     
T  48260179 tggctagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaactccgaccccgacatataataatgcacatccctgccaactgagctat 48260278  T
Q  366 gctca 370  Q
    |||||    
T  48260279 gctca 48260283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 41677168 - 41677061
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||||||||||| || ||| |||  ||||| | |||||||| |||||||| |||| ||||| |||||||||||||    
T  41677168 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgccaactgagc 41677069  T
Q  363 taagctca 370  Q
    || |||||    
T  41677068 tacgctca 41677061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 50199463 - 50199561
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||| |||| |||||||||||||||||||||| || ||| |||| ||||| | ||| |||| |||||||||||||||||||||| |||||||||    
T  50199463 tagtggctagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgtccctaccaactgag 50199561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 371
Target Start/End: Original strand, 9769566 - 9769675
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | || | |||  ||||||| |||||||||||||||||||||||    
T  9769566 ttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaactgag 9769665  T
Q  362 ctaagctcat 371  Q
    ||| ||||||    
T  9769666 ctatgctcat 9769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 378
Target Start/End: Original strand, 47645789 - 47645898
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||||      |||| ||| |||| ||||| | |||||| | ||||||||||||||||||| |||||||||||||    
T  47645789 tagtggctagaattcacctttttcaaggtg------tggagtgtccgggcttcgaaccccgacctctgcatataacaatgcatgtctctgccaactgagc 47645882  T
Q  363 taagctcatgggaact 378  Q
    || |||||||||||||    
T  47645883 tatgctcatgggaact 47645898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 370
Target Start/End: Original strand, 11238019 - 11238122
Alignment:
Q  268 ggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 366  Q
    ||||| ||||||||||||||||| |||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||||||| ||||| |||||||| |    
T  11238019 ggctagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtccatgccatctgagctatg 11238118  T
Q  367 ctca 370  Q
    ||||    
T  11238119 ctca 11238122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 42908879 - 42908772
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||| |||||||||||  ||||||||||  | | |||  ||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  42908879 tagtggttagaattctcctttttcaagaagaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagc 42908780  T
Q  363 taagctca 370  Q
    ||||||||    
T  42908779 taagctca 42908772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 370
Target Start/End: Complemental strand, 1721244 - 1721141
Alignment:
Q  268 ggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 366  Q
    ||||| ||||||||||||| |||||||||||||| | ||| |||| |||||   ||| |||| |||||||||||||||||| ||| |||||||||||| |    
T  1721244 ggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgttcctaccaactgagctatg 1721145  T
Q  367 ctca 370  Q
    ||||    
T  1721144 ctca 1721141  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 18179436 - 18179329
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||| |||||||||||| |||||||  || |||  ||| ||||| |||||  ||| ||||||||||||||||||||||||||||||||     
T  18179436 tagtggctagaattctcctttttcaaggagaataagcagggtgtctggggttcgaactccggtccctgcatataacaatgcatgtccctgccaactgagt 18179337  T
Q  363 taagctca 370  Q
    || |||||    
T  18179336 tatgctca 18179329  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 43020719 - 43020612
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||| ||||||||||||||| |||||  ||| || | ||||| | || ||||| |||||||| ||||||||||||||||||| ||||    
T  43020719 tagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtccctgccaaccgagc 43020620  T
Q  363 taagctca 370  Q
    || |||||    
T  43020619 tatgctca 43020612  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 12553302 - 12553201
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctcc-gaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||| |||||||||||||||| ||||||||||||  ||| |||| ||||| | || | |||| |||||||||||||||||| ||| |||||||||    
T  12553302 tagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccccggcccctgcatataacaatgcatgttcctaccaactgag 12553203  T
Q  362 ct 363  Q
    ||    
T  12553202 ct 12553201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 370
Target Start/End: Original strand, 52961081 - 52961176
Alignment:
Q  276 ttcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||| ||| ||||||||||||   || |||| ||||| | ||| |||| |||||||||||||||||||| |||||||||||||| |||||    
T  52961081 ttcaccttttccaacgtgaataagtggggcgtccggggttcgaaccccggcccctgcatataacaatgcatgtccttgccaactgagctatgctca 52961176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 195163 - 195045
Alignment:
Q  254 gtcaagtag-ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||| || |||  ||| | ||| |  |  |||| ||||||||  ||||||||||||    
T  195163 gtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaacctcagcccctgcatataattatgcatgtccct 195064  T
Q  352 gccaactgagctaagctca 370  Q
    ||||||||||||| |||||    
T  195063 gccaactgagctacgctca 195045  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 4511512 - 4511610
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||| || ||||||||||||| ||||||||||||| ||| || |||| ||| | | |||||||| |||||||| ||||||||||| |||||| ||||    
T  4511512 tagtggttagaattcaccttttttaaggtgaataagtgggacgtccgggattcaaacaccgacccctgcatataataatgcatgtccttgccaattgag 4511610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 369
Target Start/End: Complemental strand, 23750258 - 23750152
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||||||||||||| ||||||||| || ||||| || || || | |||||||  | |||||||||||||| ||||| ||||||||||    
T  23750258 tagtggttagaattcacctttttcaagatgaataagtggggtgttcagggtttgaaccccgacccatgtatataacaatgcatatccctaccaactgagc 23750159  T
Q  363 taagctc 369  Q
    || ||||    
T  23750158 tatgctc 23750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 33844736 - 33844687
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  33844736 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtgg 33844687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 33949242 - 33949291
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  33949242 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtgg 33949291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 47141838 - 47141891
Alignment:
Q  308 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  47141838 cggggttcgaactccgacccctgcatataacaatgcatgtccctgtcaactgag 47141891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 50576005 - 50575908
Alignment:
Q  268 ggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||||||||||||||| |||||||||||||| | |||  | | ||||| | ||  |||  |||||||||||||||||||||| ||||||||||||    
T  50576005 ggctataattcaccttttttaaggtgaataagtgaggtgtctgaggttcgaaccccagcccttgcatataacaatgcatgtcccttccaactgagcta 50575908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 377
Target Start/End: Original strand, 47763399 - 47763487
Alignment:
Q  291 gtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaac 377  Q
    |||||||||||| |||| || | ||||| ||||| |||| |||||||| ||||||| ||||||||||||||||||| ||||| ||||||    
T  47763399 gtgaataagtgggatgtccgaggttcgaactccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacgggaac 47763487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 376
Target Start/End: Original strand, 7015672 - 7015787
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaat-aagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    ||||||| || ||||||| ||||||||||||||| ||||||  |||||||  ||||| |  |  ||||  |||||||||||||||||||| |||||||||    
T  7015672 ttagtggttaaaattcacatttttcaaggtgaattaagtggggtgttcggagttcgaacctcagcccctacatataacaatgcatgtcccagccaactga 7015771  T
Q  361 gctaagctcatgggaa 376  Q
    |||| ||||| |||||    
T  7015772 gctatgctcacgggaa 7015787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 9527476 - 9527426
Alignment:
Q  321 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  9527476 ccgacccctgcatataacaatgcattgtccctgccaactgagctatgctca 9527426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 5862168 - 5862135
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||||||||||||||||||||||||||||||    
T  5862168 catataacaatgcatgtccctgccaactgagcta 5862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 19866594 - 19866545
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 302  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  19866594 gtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtgg 19866545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 29491551 - 29491470
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctca 29491470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 11405563 - 11405482
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat 345  Q
    |||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | |||||||| ||||||||||||||||    
T  11405563 ttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 11405482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 7906313 - 7906420
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||| ||||| ||||| |||||| ||  ||| | || ||||| | ||  |||| |||||||||||||||||||||| |||||||| |    
T  7906313 tagtggctagaattcacattttttaaggtcaataagcggggtgtcccgggttcgaaccccagcccctgcatataacaatgcatgtccctaccaactgaac 7906412  T
Q  363 taagctca 370  Q
    || |||||    
T  7906413 tatgctca 7906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 379
Target Start/End: Original strand, 18234336 - 18234428
Alignment:
Q  286 tcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 379  Q
    ||||||||||||||| || |||||||| ||||| | |||||| |  ||||||| |||||  |||||||||||||||||||| |||| ||| ||||    
T  18234336 tcaaggtgaataagtagagtgttcgggattcgaaccccgacctctacatataataatgc--gtccctgccaactgagctaacctcacggggactt 18234428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 43327090 - 43327011
Alignment:
Q  292 tgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||| |||||  || ||||| || ||||||| |||||||||||| ||||||||||| ||||||| || |||||    
T  43327090 tgaataagtgggatgtttagggttcgaacttcgacccctgcatataacaatacatgtccctgcaaactgagttatgctca 43327011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 49632333 - 49632294
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  49632333 catataacaatgcatgtccctgccaattgagctacgctca 49632294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 9931206 - 9931088
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| |||| | || |||||||||| || |||||||||||||||  |||| ||| ||||| ||||  | |  |||||||| |||||||||||||    
T  9931206 gtcaagtagtctagtagttagaattcaccttctttaaggtgaataagtggggtgtttggggttcgaactccagctcttgcatataataatgcatgtccct 9931107  T
Q  352 gccaactgagctaagctca 370  Q
    || ||||||| || |||||    
T  9931106 gctaactgagttatgctca 9931088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 9976371 - 9976409
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  9976371 tagtggctagaattcacttttttcaaggtgaataagtgg 9976409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 27684693 - 27684647
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataag 299  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  27684693 gtcaagtagtttagtggctaaaattcacttttttcaaggtgaataag 27684647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 33176152 - 33176206
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 379  Q
    |||| |||||||||||||||| ||||| |||||||||||| ||||| ||| ||||    
T  33176152 cccctgcatataacaatgcatatccctaccaactgagctatgctcaaggggactt 33176206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 35424260 - 35424214
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataa 298  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  35424260 ggtcaagtagtctagtggctagaattcatctttttcaaggtgaataa 35424214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 3569084 - 3569055
Alignment:
Q  331 catataacaatgcatgtccctgccaactga 360  Q
    ||||||||||||||||||||||||||||||    
T  3569084 catataacaatgcatgtccctgccaactga 3569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 23973458 - 23973507
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| ||||||||| ||||||| |||||||| ||||||||||||    
T  23973458 gtcaagtagtctagtggctagaattcacatttttcaacgtgaataagtgg 23973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 27654997 - 27655030
Alignment:
Q  269 gctataattcacctttttcaaggtgaataagtgg 302  Q
    |||| |||||||||||||||||||||||||||||    
T  27654997 gctagaattcacctttttcaaggtgaataagtgg 27655030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 38021333 - 38021252
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| ||||| |||| |||||||| ||||||| |||| |||||||||||||| |||||    
T  38021333 gtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtccttgccaactgagctatgctca 38021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 358
Target Start/End: Complemental strand, 38028635 - 38028550
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 358  Q
    ||||||| |||||||||||||||||||||  |||   || ||||| ||||| |||  |||||||||||||||||||| || |||||    
T  38028635 aattcacatttttcaaggtgaataagtggggtgtctagggttcgaactccggccctagcatataacaatgcatgtccttgtcaact 38028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 52765707 - 52765824
Alignment:
Q  255 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctg 352  Q
    |||||||||| |||||||| |||||||||||||  | ||||||||||| ||||| |||| ||| | | || ||||  ||||| |||||| ||||||| ||    
T  52765707 tcaagtagttcagtggctagaattcacctttttttaagtgaataagtgagatgtccgggattcaaaccccaacccatgcatacaacaatacatgtccatg 52765806  T
Q  353 ccaactgagctaagctca 370  Q
    |||||  |||||| ||||    
T  52765807 ccaacaaagctaaactca 52765824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 3797972 - 3797925
Alignment:
Q  255 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||    
T  3797972 tcaagtagtttaatggctataattcaccttttt-aaggtgaataagtgg 3797925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 4288697 - 4288589
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||| |||||| |||||| ||||||||||| || | |||  ||| ||||| ||| |||||| |||||||| |||| |||||| | |||| ||||    
T  4288697 ttagtggctagaattcatcttttttaaggtgaataaatgaggtgtctggggttcgaactctgacccctgcatataataatgtatgtccataccaattgag 4288598  T
Q  362 ctaagctca 370  Q
     || |||||    
T  4288597 ttatgctca 4288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 4429471 - 4429576
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  ||| |||||||||||| ||||| || ||||| | || ||||| |||||||| |||||||   ||| ||||||||||    
T  4429471 tagtggctagaattcaccttat--aagatgaataagtggaatgttcagggttcgaaccccaacccctgcatataataatgcattgtcctaccaactgagc 4429568  T
Q  363 taagctca 370  Q
    || |||||    
T  4429569 tatgctca 4429576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 5684169 - 5684129
Alignment:
Q  324 accccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||| |||||||| |||||||||| |||||||||||||||    
T  5684169 acccctgcatataataatgcatgtctctgccaactgagcta 5684129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 9004387 - 9004347
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||||||||||||||||||||| |||||    
T  9004387 gcatataacaatatatgtccctgccaactgagctatgctca 9004347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 31965626 - 31965538
Alignment:
Q  258 agtagttagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcat 345  Q
    ||||||||||| ||| ||||||| ||||  |||||||||||||| | |||||||  ||||| | |||| ||| |||||||| |||||||    
T  31965626 agtagttagtgactagaattcactttttaaaaggtgaataagtgaggtgttcggagttcgaaccccgatccctgcatataataatgcat 31965538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 34870318 - 34870362
Alignment:
Q  313 ttcgatctccgaccccggcatataacaatgcatgtccctgccaac 357  Q
    ||||| |||||||||| |||||||||||||||||| |||| ||||    
T  34870318 ttcgaactccgacccctgcatataacaatgcatgtacctgtcaac 34870362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 37262159 - 37262199
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||| ||||||||||||||||||| ||| |||||    
T  37262159 gcatataacaacgcatgtccctgccaactgaactatgctca 37262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 369
Target Start/End: Original strand, 47939252 - 47939292
Alignment:
Q  330 gcatataacaatgcat-gtccctgccaactgagctaagctc 369  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  47939252 gcatataacaatgcattgtccctgccaactgagctatgctc 47939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 370
Target Start/End: Complemental strand, 34524994 - 34524876
Alignment:
Q  253 ggtcaagtagttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||  |||||||| |||||||||||||| ||||||||||||||  ||||||||  |||| | ||| |||| ||||||||||||||||||||||    
T  34524994 ggtcaagtagccagtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccct 34524895  T
Q  352 gccaactgagctaagctca 370  Q
    ||||||||||||| |||||    
T  34524894 gccaactgagctatgctca 34524876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 379
Target Start/End: Complemental strand, 30833122 - 30833009
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| ||||| |||||||||||| ||||||||||  ||| |||| ||||| | |||||||| ||||||||||||||||||||||||||||||| |||     
T  30833122 tggctagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactat 30833023  T
Q  366 gctcatgggaactt 379  Q
    ||||||||| ||||    
T  30833022 gctcatggggactt 30833009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 30668162 - 30668278
Alignment:
Q  256 caagtagt-tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgc 353  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||||||| || |||||| | ||||| ||| |||||| |||||||| ||||||||||  |||    
T  30668162 caagtagtctagtgactataattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgc 30668261  T
Q  354 caactgagctaagctca 370  Q
    |||||||| || |||||    
T  30668262 caactgagttatgctca 30668278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 4844262 - 4844140
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| |||||| || ||||||| |||||||||||||||||||| | |||  | | ||  | | |||||||| ||||||||||||||||||||||    
T  4844262 gtcaagtagtctagtggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtccct 4844163  T
Q  352 gccaactgagctaagctcatggg 374  Q
    |||||||||| ||  ||||||||    
T  4844162 gccaactgagttatactcatggg 4844140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 26669635 - 26669753
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || |||  ||| ||||| | ||  ||||  |||||||  ||||||||||||    
T  26669635 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccct 26669734  T
Q  352 gccaactgagctaagctca 370  Q
     |||||||||||| |||||    
T  26669735 accaactgagctatgctca 26669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 359
Target Start/End: Original strand, 19680234 - 19680331
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactg 359  Q
    |||||| ||| |||||||||||||||||| |||||||| || ||| |||| ||||| | ||| | || |||||||||||||||||||| |||||||||    
T  19680234 ttagtgtctagaattcacctttttcaaggagaataagtggggtgtccggggttcgaaccccggctcctgcatataacaatgcatgtccatgccaactg 19680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 35190869 - 35190759
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||  |||||||| ||||| |||||||||| |||||||| |||||||    || ||||||||||    
T  35190869 tagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcattgttctaccaactgagc 35190772  T
Q  363 taagctcatggga 375  Q
    || ||||||||||    
T  35190771 tatgctcatggga 35190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 8309205 - 8309161
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctcatggg 374  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  8309205 gcatataacaatgcatgtccctgccaactgagctatgctcatggg 8309161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 380
Target Start/End: Complemental strand, 10455851 - 10455733
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||| || ||||| | |||||||||| ||||||||||   ||| |||| ||||| | ||| |||| |||||||||||||||||| ||||||||||||     
T  10455851 tagtggttagaattctcttttttcaaggagaataagtgggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgttcctgccaactgaa 10455752  T
Q  362 ctaagctcatgggaacttg 380  Q
    ||| ||||| ||| |||||    
T  10455751 ctatgctcacggggacttg 10455733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 14949006 - 14949114
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataa--gtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||||||||||||||||||||||||||||  | || ||| |||  ||||| | |||||| | |||||||| |||| ||||  ||||||||||||    
T  14949006 tagtggctataattcacctttttcaaggtgaataaatgggggtgtccggagttcgaaccccgacctctgcatataataatgtatgtttctgccaactgag 14949105  T
Q  362 ctaagctca 370  Q
     || |||||    
T  14949106 ttatgctca 14949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 7374055 - 7374130
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 356  Q
    ||||| |||||||||||||||  |||||||  ||||| |||||||||   ||||||||||||||||||||||||||    
T  7374055 ttttttaaggtgaataagtggggtgttcggagttcgaactccgacccatacatataacaatgcatgtccctgccaa 7374130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 2945646 - 2945596
Alignment:
Q  321 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  2945646 ccgacccctgcatataacaatgcattgtccctgccaactgagctatgctca 2945596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 364
Target Start/End: Complemental strand, 9031807 - 9031773
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||||||||||||||||||||||||||||||||||    
T  9031807 gcatataacaatgcatgtccctgccaactgagcta 9031773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 9422943 - 9422829
Alignment:
Q  263 ttagtggctataattcacctttt-tcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    |||||||||| |||||||||||| |||||||||||||||||  ||| |||  ||||| | ||  | |  | |||||||||||||||||||||||||||||    
T  9422943 ttagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaaccccagctcttgtatataacaatgcatgtccctgccaactga 9422844  T
Q  361 gctaagctcatggga 375  Q
    | || ||||| ||||    
T  9422843 gttatgctcacggga 9422829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 370
Target Start/End: Original strand, 22730686 - 22730796
Alignment:
Q  262 gttagtggctataattcacctt-tttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactg 359  Q
    ||||||||||| |||||||||| ||| |||||||||||||||  ||| || | ||||| || |   ||| ||||||||||||||||||| ||||||||||    
T  22730686 gttagtggctagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactg 22730785  T
Q  360 agctaagctca 370  Q
    || || |||||    
T  22730786 agttatgctca 22730796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 12089203 - 12089093
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| ||||| |||| |||||||| |||||||   ||| ||||||||||    
T  12089203 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagc 12089106  T
Q  363 taagctcatggga 375  Q
    || ||||| ||||    
T  12089105 tatgctcacggga 12089093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 20858431 - 20858468
Alignment:
Q  324 accccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  20858431 acccctgcatataacaatgcatgtccctgccaactgag 20858468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 1395578 - 1395614
Alignment:
Q  265 agtggctataattcacctttttcaaggtgaataagtg 301  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1395578 agtggctagaattcacctttttcaaggtgaataagtg 1395614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 1488186 - 1488098
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||| |||| ||||||||||| |||  |||| ||| ||||| | |||||| | ||||||||||||||||||| ||||||| ||||    
T  1488186 aattcaccatttttaaggtgaataaatggggtgtttggggttcgaaccccgacctctgcatataacaatgcatgtctctgccaattgag 1488098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 8253596 - 8253676
Alignment:
Q  282 tttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||||||||||||||    || || ||||| | ||  |||| |||||||||||||||||||| ||||||||||||    
T  8253596 tttttcaaggtgaataagtggggtgtctgggttcgaaccccagcccctgcatataacaatgcatgtccatgccaactgagc 8253676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 12127898 - 12128003
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| |||||  ||||||||| |||||||| |||||||   ||| ||||||||||    
T  12127898 tagtggctagaattcaccttat--aaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcattgtcctaccaactgagc 12127995  T
Q  363 taagctca 370  Q
    || |||||    
T  12127996 tatgctca 12128003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 7234070 - 7234035
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||| |||||||||||||||||||||||||||||    
T  7234070 tggctagaattcacctttttcaaggtgaataagtgg 7234035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 8176095 - 8175997
Alignment:
Q  274 aattcacctttttc-aaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||  |||||||||||||||  |||||||  ||||| | ||   ||| ||||||||||||||||||| ||| ||||||||||| |||||    
T  8176095 aattcacctttttttaaggtgaataagtggggtgttcggagttcgaacaccagtccctgcatataacaatgcatgtctctgtcaactgagctatgctca 8175997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 364
Target Start/End: Complemental strand, 17176190 - 17176156
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||||||||||||||||||| |||||||||||    
T  17176190 gcatataacaatgcatgtccctgtcaactgagcta 17176156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Complemental strand, 32372552 - 32372514
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||| || |||||||||||||||||||||||||||||    
T  32372552 tagtggttaaaattcacctttttcaaggtgaataagtgg 32372514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 369
Target Start/End: Original strand, 20149976 - 20150073
Alignment:
Q  274 aattcacctttttcaaggtgaataagt-ggatgttc-gggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctc 369  Q
    ||||||||||||||||||||||||||| || ||| | ||| ||||| | || | |||  |||||||||| ||| |||||| |||||||||||| ||||    
T  20149976 aattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatgctc 20150073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 369
Target Start/End: Complemental strand, 22182856 - 22182759
Alignment:
Q  274 aattcacctttttcaaggtgaataagt-ggatgttc-gggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctc 369  Q
    ||||||||||||||||||||||||||| || ||| | ||| ||||| | || | |||  |||||||||| ||| |||||| |||||||||||| ||||    
T  22182856 aattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatgctc 22182759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 31639231 - 31639142
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| ||||| |||||||||| ||| | || ||||| ||||| ||||  ||||||||||||| |||||||| |||||||| || |||||    
T  31639231 ttttttaaggtaaataagtggagtgtcctgggttcgaactccggcccctacatataacaatgcgtgtccctgtcaactgagttatgctca 31639142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 6219393 - 6219361
Alignment:
Q  332 atataacaatgcatgtccctgccaactgagcta 364  Q
    |||||| ||||||||||||||||||||||||||    
T  6219393 atataataatgcatgtccctgccaactgagcta 6219361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 14981751 - 14981807
Alignment:
Q  325 ccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaacttg 380  Q
    |||| |||||||| ||||||| ||||||||||||||||||| ||||| ||| |||||    
T  14981751 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacttg 14981807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 17347305 - 17347265
Alignment:
Q  321 ccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  17347305 ccgacccatgcatataacaatgcatatccctgccaactgag 17347265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 19135970 - 19135930
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||| ||||||||||||||||||| |||||| |||||    
T  19135970 gcatataataatgcatgtccctgccaaccgagctatgctca 19135930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 11246481 - 11246588
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||  ||| || || | |||||||| |||||||||||||||||||||||||||||||||    
T  11246481 tagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatgcatgtccctgccaactgagc 11246580  T
Q  363 taagctca 370  Q
    || |||||    
T  11246581 tatgctca 11246588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 38040373 - 38040263
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||| || ||| ||| |  ||||||| |||||||||||||||||||||||||||||||||    
T  38040373 tagtgactataattcacctttttcaagatgaataagtgggatgtccgagtt-cgaacctcgacccctgcatataacaatgcatgtccctgccaactgagc 38040275  T
Q  363 taagctcatggg 374  Q
    || |||||||||    
T  38040274 tatgctcatggg 38040263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 31556926 - 31556825
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||| |||| ||||| |||||||||| |||||||||||||||||||||||| || |||||    
T  31556926 tagtggctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagc 31556827  T
Q  363 ta 364  Q
    ||    
T  31556826 ta 31556825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 379
Target Start/End: Complemental strand, 27006444 - 27006332
Alignment:
Q  268 ggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 366  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||  ||||| | |||||||| ||||||||||||||||| |||||||| |||| ||| |    
T  27006444 ggctagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccgaccccagcatataacaatgcatgcccctgccatctgacctatg 27006345  T
Q  367 ctcatgggaactt 379  Q
    |||| ||| ||||    
T  27006344 ctcacggggactt 27006332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 377
Target Start/End: Original strand, 31280357 - 31280480
Alignment:
Q  255 tcaagtagt-tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgc 353  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||||| |||||||| ||||| |   | |||| |||||||  ||| |||||||||||    
T  31280357 tcaagtagtctagtgggtagaattcacctttttcaaggtggataagtgggtgttcggggttcgaaccttggcccctgcatatagtaatacatgtccctgc 31280456  T
Q  354 caactgagctaagctcatgggaac 377  Q
    ||||||||||| ||||| ||||||    
T  31280457 caactgagctatgctcacgggaac 31280480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 37986854 - 37986956
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |||| ||| | |||||||| | |||||||| ||||||| || || | ||||||||    
T  37986854 tagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatgcatatctctactaactgagc 37986953  T
Q  363 taa 365  Q
    |||    
T  37986954 taa 37986956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 28768705 - 28768608
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    |||||| || |||||||||||||||||||| ||||||| |||||| ||| ||||| ||| |||||  |||||| ||||||||||||||| ||||||||    
T  28768705 tagtggttagaattcacctttttcaaggtggataagtgagatgtttgggattcgaactctgacccttgcatatgacaatgcatgtccctaccaactga 28768608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 362
Target Start/End: Complemental strand, 20186983 - 20186875
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||||||  |||  ||| ||  | | |||||||| |||||||| |||||||||||||    
T  20186983 gtcaagtagtctagtggttataattcacttttttcaaggtgaataagtggggtgtctggggtt--aaccccgacccctgcatataataatgcatgtccct 20186886  T
Q  352 gccaactgagc 362  Q
    |||||||||||    
T  20186885 gccaactgagc 20186875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 3535923 - 3536030
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||| ||||| |||||||||||||||  ||| |||| ||||| | ||| | || | ||||||||||||||||||||||||||||| |    
T  3535923 tagtggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaaccccggctcctgtatataacaatgcatgtccctgccaactgaac 3536022  T
Q  363 taagctca 370  Q
    || |||||    
T  3536023 tatgctca 3536030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 362
Target Start/End: Complemental strand, 34325384 - 34325274
Alignment:
Q  254 gtcaagtag-ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||| |||||||||| ||||||  ||||| ||||||||||||| ||||||||| | ||||| | ||   ||| |||||||| |||||||||||||    
T  34325384 gtcaagtagcttagtggctagaattcattttttttaaggtgaataagttggatgttcgagattcgaaccccagtccctgcatataataatgcatgtccct 34325285  T
Q  352 gccaactgagc 362  Q
    | |||||||||    
T  34325284 gtcaactgagc 34325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Original strand, 42553138 - 42553234
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||| |||||||||||||||||||| | ||| |||| ||||| | ||||||| | ||||||||||||||||||  || ||||||||||| |||||    
T  42553138 aattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccgaccctg-catataacaatgcatgtcgttgtcaactgagctatgctca 42553234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 370
Target Start/End: Original strand, 41405078 - 41405182
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| |||||||||||||||| |||||||| |||| |||  | | ||| | | |||||||  ||||||||||||||||||||||| ||||||| |||     
T  41405078 tggctaaaattcacctttttcaaagtgaataattggagtgtctgcggttccaaccccgacccttgcatataacaatgcatgtccctgtcaactgaactat 41405177  T
Q  366 gctca 370  Q
    |||||    
T  41405178 gctca 41405182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 42781626 - 42781682
Alignment:
Q  308 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||| ||||| | |||| ||| |||||||||||||||||||||||||||||||||||    
T  42781626 cggggttcgaaccccgaaccctgcatataacaatgcatgtccctgccaactgagcta 42781682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 374
Target Start/End: Original strand, 9408982 - 9409049
Alignment:
Q  308 cgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctcatggg 374  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| || | |||||||    
T  9408982 cggggttcgaactccgacccctgcatataacaatgcattgtccctgccaactgagttatgttcatggg 9409049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 13862232 - 13862126
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||| |||||||||||  ||||||||||  ||| |||||| ||| |||||||||| |||||||||||||||| ||| || ||||||| |    
T  13862232 tagtggttagaattctcctttttcaagaagaataagtggggtgtccgggtt-cgaactccgacccctgcatataacaatgcatatccatgtcaactgaac 13862134  T
Q  363 taagctca 370  Q
    || |||||    
T  13862133 tatgctca 13862126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 18872625 - 18872517
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||    |||||||||||||||  |||||||| ||||| | |||||||| |||||||| |||||||   ||| ||||||||||    
T  18872625 tagtggctagaattcacctt----aaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagc 18872530  T
Q  363 taagctcatggga 375  Q
    || ||||| ||||    
T  18872529 tatgctcacggga 18872517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 28537243 - 28537136
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||| ||||||| |||||||||| || ||| |||| ||||| | ||| |||  |||||||||||||||||||| || ||| ||||     
T  28537243 tagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccggcccatgcatataacaatgcatgtccatgtcaattgagt 28537144  T
Q  363 taagctca 370  Q
    || |||||    
T  28537143 tatgctca 28537136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 370
Target Start/End: Original strand, 6806632 - 6806735
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagcta 364  Q
    |||||| |||||||||| |  || ||||||||||||| ||| |||| |||||   |||||||| ||||||||||||||| |||| |||||||||||||||    
T  6806632 tggctagaattcaccttat--aatgtgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcattgtctctgccaactgagcta 6806729  T
Q  365 agctca 370  Q
     |||||    
T  6806730 tgctca 6806735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 42455383 - 42455482
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||| ||| |||| ||||| ||||| |||| |||||||| |||||||   ||| ||||||||||    
T  42455383 tagtggctagaattcaccttat--aaggtgaataagtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagc 42455480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 17557119 - 17557031
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| |||||||||||||||  ||| ||||||| || | ||||||||  |||||||||||||||||| |||||||||||| || |||||    
T  17557119 ttttttaaggtgaataagtggggtgtccgggttt-gaaccccgacccctacatataacaatgcatgtctctgccaactgagttaggctca 17557031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 25660958 - 25660913
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||    
T  25660958 cccctgcatataacaatgcatatccctgccaactgagctatgctca 25660913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 32158403 - 32158513
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||  |||||||| ||||| | ||| |||| |||||||| |||||||   ||| |||| |||||    
T  32158403 tagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagc 32158500  T
Q  363 taagctcatggga 375  Q
    |||||||| ||||    
T  32158501 taagctcacggga 32158513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 35813291 - 35813336
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||    
T  35813291 cccctgcatataacaatgcatgtccctgtcaactgagctatgctca 35813336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 40250182 - 40250271
Alignment:
Q  282 tttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||| | |||||||| || |||||| | ||||| | ||||| || ||||||||||||||||||  ||||||||||||||| |||||    
T  40250182 tttttcaatgagaataagtagggtgttcgaggttcgaaccccgactcctgcatataacaatgcatgttactgccaactgagctatgctca 40250271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 370
Target Start/End: Original strand, 7147009 - 7147113
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| |||||||||||||||| || ||||| || | |||  | | ||||| | |||||||| |||||||| ||||||||||| | ||||||||||||     
T  7147009 tggctagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatgcatgtccttaccaactgagctat 7147108  T
Q  366 gctca 370  Q
    |||||    
T  7147109 gctca 7147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 38129000 - 38129080
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgc 343  Q
    |||||| || |||||| | ||||||||||||||||||||| ||| | || ||||| | |||||||| ||||||||||||||    
T  38129000 tagtggttagaattcatcattttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcatataacaatgc 38129080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 366
Target Start/End: Original strand, 8018591 - 8018706
Alignment:
Q  253 ggtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    |||||||||||| |||| ||| |||| || ||||||| |  ||||||||||  ||||| || ||||| |||||||| |  ||||||| ||||||||||||    
T  8018591 ggtcaagtagtttagtgactaaaatttacatttttcaggaagaataagtggggtgttcaggattcgaactccgacctctacatataataatgcatgtccc 8018690  T
Q  351 tgccaactgagctaag 366  Q
    ||| ||||||| ||||    
T  8018691 tgcgaactgagttaag 8018706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 369
Target Start/End: Complemental strand, 10106735 - 10106632
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| ||||  ||||||||||| |||||||||||  ||| |||| ||||| ||  | ||||  ||||||| |||| |||||||||||||||||||||     
T  10106735 tggctagaatttgcctttttcaagatgaataagtggggtgtccggggttcgaactttggcccctacatataataatggatgtccctgccaactgagctat 10106636  T
Q  366 gctc 369  Q
    ||||    
T  10106635 gctc 10106632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 17137854 - 17137937
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatg 346  Q
    |||||| || ||||||| |||||||||||||||||||||| |||  ||| ||||| | |||| ||| |||||||| ||||||||    
T  17137854 tagtggttagaattcacgtttttcaaggtgaataagtggagtgtcgggggttcgaaccccgatccctgcatataataatgcatg 17137937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 31907741 - 31907662
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    |||||||||||||||||||||  |||||| | || || |   |||||| |||||||||||||||||||||||| ||||||    
T  31907741 tttttcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcatataacaatgcatgtccctgcaaactga 31907662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 40384360 - 40384321
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  40384360 ttagtggctagaattcaccttttttaaggtgaataagtgg 40384321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 19608716 - 19608610
Alignment:
Q  269 gctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagc 367  Q
    |||| ||||||  ||||| |||||||||||||| | ||| |||  ||||| | |||||||| |||||||| ||||||| | |||  ||||||||||| ||    
T  19608716 gctagaattcattttttttaaggtgaataagtgaagtgtccggagttcgaaccccgacccctgcatataataatgcatattcctatcaactgagctatgc 19608617  T
Q  368 tcatggg 374  Q
    |||||||    
T  19608616 tcatggg 19608610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 22687868 - 22687906
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||| || |||||||||||||||||||||||||||||    
T  22687868 tagtggttagaattcacctttttcaaggtgaataagtgg 22687906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 36742012 - 36742066
Alignment:
Q  321 ccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggga 375  Q
    |||| ||| |||||||||||| |||||| ||||||||||||||| ||||| ||||    
T  36742012 ccgatccctgcatataacaattcatgtctctgccaactgagctatgctcacggga 36742066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 1463952 - 1463871
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  1463952 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 1463871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 3102155 - 3102216
Alignment:
Q  304 tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagcta 364  Q
    |||||||| ||||| | ||||| ||  ||||||||||||||| |||||||||||||||||||    
T  3102155 tgttcggggttcgaaccccgactcctacatataacaatgcattgtccctgccaactgagcta 3102216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Original strand, 4674829 - 4674910
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||| ||||||||||| |||||    
T  4674829 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactgagctatgctca 4674910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 9963463 - 9963422
Alignment:
Q  324 accccggcatataacaatgcat-gtccctgccaactgagcta 364  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  9963463 acccctgcatataacaatgcattgtccctgccaactgagcta 9963422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 18536034 - 18535985
Alignment:
Q  253 ggtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtg 301  Q
    |||||||||||| ||||| || ||||||| ||||||||||||||||||||    
T  18536034 ggtcaagtagtttagtggttagaattcacttttttcaaggtgaataagtg 18535985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 37417178 - 37417231
Alignment:
Q  325 ccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaac 377  Q
    |||| |||||||| |||| || ||||||||||||||||||||||||| ||||||    
T  37417178 cccctgcatataataatgtattgtccctgccaactgagctaagctcacgggaac 37417231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 41539422 - 41539316
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||| ||| ||||||||||||||||| | ||||||| || |||  ||| ||||| || | ||||| ||||||||  |||||||||||  ||||||||||    
T  41539422 tagtgactagaattcacctttttcaagattaataagtggggtgtctggggttcgaactacaacccctgcatataattatgcatgtccc--ccaactgagc 41539325  T
Q  363 taagctcat 371  Q
    || ||||||    
T  41539324 tatgctcat 41539316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 42260706 - 42260791
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgt 347  Q
    ||||| |||| |||||| |||||| ||||||||||||| |||||| |||  |||||   |||| ||| ||||||||||||||||||    
T  42260706 ttagtagctagaattcatctttttaaaggtgaataagtgggatgtccggagttcgaaacccgaaccctgcatataacaatgcatgt 42260791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 17178278 - 17178310
Alignment:
Q  332 atataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||||||||||||||||| |||||||||||    
T  17178278 atataacaatgcatgtccctgtcaactgagcta 17178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 29096297 - 29096402
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| ||||| |||  |||||||| |||||||   ||| ||||||||||    
T  29096297 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggcccttgcatataataatgcattgtcctaccaactgagc 29096394  T
Q  363 taagctca 370  Q
    || |||||    
T  29096395 tatgctca 29096402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 31280602 - 31280634
Alignment:
Q  332 atataacaatgcatgtccctgccaactgagcta 364  Q
    |||||| ||||||||||||||||||||||||||    
T  31280602 atataataatgcatgtccctgccaactgagcta 31280634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 39955099 - 39955071
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||||||||||||||||||||||    
T  39955099 aattcacctttttcaaggtgaataagtgg 39955071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 20610847 - 20610740
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||| |||  ||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  20610847 tagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagc 20610748  T
Q  363 taagctca 370  Q
    || |||||    
T  20610747 tatgctca 20610740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 12585537 - 12585644
Alignment:
Q  256 caagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgc 353  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| | |||||||| ||||| ||||| |||   |||||||||||||||||||||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggcccttacatataacaatgcatgtccctgc 12585636  T
Q  354 caactgag 361  Q
    ||||||||    
T  12585637 caactgag 12585644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 49039432 - 49039539
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| |||| ||||| | ||   ||| |||||||||||||||||||||||||||||||||    
T  49039432 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgagc 49039531  T
Q  363 taagctca 370  Q
    || |||||    
T  49039532 tatgctca 49039539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 54854155 - 54854273
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| | ||  |||| ||||||||  ||||||||||||    
T  54854155 gtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtccct 54854254  T
Q  352 gccaactgagctaagctca 370  Q
    ||||||||||||| |||||    
T  54854255 gccaactgagctatgctca 54854273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 49319502 - 49319394
Alignment:
Q  264 tagtggctataattcaccttttt-caaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||| |||| || || | |||||||| |||||||| ||||||||||| |||||||||||    
T  49319502 tagtggctataattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaactgag 49319403  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  49319402 ctatgctca 49319394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 33076637 - 33076526
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||||||||| |||||| ||||||||||||| || ||| |||| ||||| | |||||||| |||||||| ||||||||||||  ||||||||||    
T  33076637 tagtggctataattcatcttttt-aaggtgaataagtagggtgtccggggttcgaaccccgacccctgcatataataatgcatgtccc--ccaactgagc 33076541  T
Q  363 taagctcatgggaac 377  Q
    || ||||| ||||||    
T  33076540 tatgctcacgggaac 33076526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 41492486 - 41492592
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||| |||||||||  ||| | |||| ||| | ||| |||| |||||||| ||||||||||||||||||||||||    
T  41492486 tagtggctagaattcacctttttcaaggtaaataagtggggtgtccaggtt-cgaaccccggcccctgcatataataatgcatgtccctgccaactgagc 41492584  T
Q  363 taagctca 370  Q
    || |||||    
T  41492585 tatgctca 41492592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 23226681 - 23226787
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||  ||||| | || || || ||||||||||||||||||||||    
T  23226681 gtcaagtagtatagtggctataattcacattttttaaggtgaataagtgagatgtccggtgttcgaaccccaactcctgcatataacaatgcatgtccct 23226780  T
Q  352 gccaact 358  Q
    | |||||    
T  23226781 gtcaact 23226787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 370
Target Start/End: Complemental strand, 24039989 - 24039889
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 365  Q
    |||||| |||||||||||||||||||||||||||| | |||||||| ||||| | |||||||   ||||||||||||||||| |||| |||||||||||     
T  24039989 tggctagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaaccccgaccc---catataacaatgcatgt-cctgtcaactgagctat 24039894  T
Q  366 gctca 370  Q
    |||||    
T  24039893 gctca 24039889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 36008382 - 36008275
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactga 360  Q
    |||||||||| |||||||||| |  |||||||||||||||  |||||||| ||||| | ||| |||| |||||||||||||||| |||||||||||||||    
T  36008382 ttagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactga 36008285  T
Q  361 gctaagctca 370  Q
    |||| |||||    
T  36008284 gctatgctca 36008275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 33359925 - 33359818
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| | || ||||| |  ||||||  ||||||||||||| |||||| || |||||||||    
T  33359925 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgacccttgcatataacaatgaatgtccatgtcaactgagc 33359826  T
Q  363 taagctca 370  Q
    || |||||    
T  33359825 tatgctca 33359818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 27922004 - 27921890
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||| ||||| ||| |||||||||| |||||  ||| ||||| | ||| |||| |||||||| ||||||||||||| ||||||||||    
T  27922004 tagtggttagaattcacattttttaagatgaataagtgagatgtctggggttcgaaccccggcccctgcatataataatgcatgtccctaccaactgagc 27921905  T
Q  363 taagctcatgggaac 377  Q
    || ||||| ||||||    
T  27921904 tatgctcacgggaac 27921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 56865 - 56954
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||||||| |||  |||||||  ||||| ||||| |||  |||||||||||||||||||||||||||||||| || |||||    
T  56865 tttttcaaggtgaataaatggggtgttcggagttcgaactccggcccttgcatataacaatgcatgtccctgccaactgagttatgctca 56954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 21023339 - 21023439
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||||||||||||||||||||||| || |||  ||| ||||| | || ||||||| ||||||||||||||||  |||||||||||||    
T  21023339 tagtggttagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaaccccaaccccgg-atataacaatgcatgtttctgccaactgagc 21023437  T
Q  363 ta 364  Q
    ||    
T  21023438 ta 21023439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 35230271 - 35230388
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||||||||| ||||||||| ||||||||| |||||||||  ||| || | ||||| | |||||||  ||||||| |||||||| |||||    
T  35230271 gtcaagtagtctagtggctaaaattcacctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatgcatatccct 35230370  T
Q  352 gccaactgagctaagctc 369  Q
     |||||||||||| ||||    
T  35230371 accaactgagctatgctc 35230388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 49743481 - 49743364
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||| ||||| || ||||||||||||||||||| |||||||| | ||| |||| |||||   ||| |||| |||||||| ||||||| |||||    
T  49743481 gtcaagtagtttagtggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatgcatatccct 49743382  T
Q  352 gccaactgagctaagctc 369  Q
    ||||||||| ||| ||||    
T  49743381 gccaactgaactatgctc 49743364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 370
Target Start/End: Original strand, 1589144 - 1589251
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||| ||||||||||||| ||| ||||||| ||| |||| |||| |||||   | |||||| ||||||||||||||||||| | ||||||||||    
T  1589144 ttagtggctagaattcaccttttt-aagatgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatgcatgtcaccgccaactgag 1589242  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  1589243 ctatgctca 1589251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 2565328 - 2565261
Alignment:
Q  304 tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctca 370  Q
    |||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||| |||||    
T  2565328 tgttcgggattcgaactccgacccctgcatataacaatgcattgtccctgtcaactgagctatgctca 2565261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 42758151 - 42758257
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||||||||| |||||| |||||||||||||||  ||| | || ||||| | ||| |||| |||||||| ||||||||||||| | ||||||||    
T  42758151 tagtggctataattcatctttttgaaggtgaataagtggggtgtccagggttcgaac-ccggcccctgcatataataatgcatgtccctacaaactgagc 42758249  T
Q  363 taagctca 370  Q
    || |||||    
T  42758250 tatgctca 42758257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 54265035 - 54264924
Alignment:
Q  265 agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 363  Q
    |||||||| |||||| ||||||||||||||||||||| | |||||| | || || | | ||||||  |||||||||||||||||  |||||| |||||||    
T  54265035 agtggctagaattcatctttttcaaggtgaataagtgaggtgttcgaggtttgaaccctgacccctacatataacaatgcatgtttctgccagctgagct 54264936  T
Q  364 aagctcatggga 375  Q
    | ||||| ||||    
T  54264935 atgctcacggga 54264924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 18740921 - 18741002
Alignment:
Q  282 tttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||||||||||||||   |||| ||| ||||| |||||||||| |||||||| ||||||| || ||||||||||||    
T  18740921 tttttcaaggtgaataagtgggggtgtttggggttcgaactccgacccctgcatataataatgcatatctctgccaactgag 18741002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 9084809 - 9084756
Alignment:
Q  321 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgg 373  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  9084809 ccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcatgg 9084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 20166362 - 20166317
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  20166362 cccctgcatataacaatgcatgtccctgccaactgagctacgctca 20166317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 4419662 - 4419780
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||| || || ||||||| ||||||||||||||||| || | ||||| || || || | ||| |||| ||||||||||||||||||| ||    
T  4419662 gtcaagtagtgtagcggttagaattcacttttttcaaggtgaataaatgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtctct 4419761  T
Q  352 gccaactgagctaagctca 370  Q
    | |||||||| || |||||    
T  4419762 gacaactgagttatgctca 4419780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 21664186 - 21664076
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 363  Q
    |||||| || ||||||||||| ||||| |||||||||||||||  ||| ||||| |  |  |||| ||||||||  || ||| ||||| |||||||||||    
T  21664186 tagtggttagaattcacctttctcaagatgaataagtggatgtctgggattcgaacctcagcccctgcatataattatacatatccctaccaactgagct 21664087  T
Q  364 aagctcatggg 374  Q
    | |||||||||    
T  21664086 atgctcatggg 21664076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 21672950 - 21672840
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 363  Q
    |||||| || ||||||||||| ||||| |||||||||||||||  ||| ||||| |  |  |||| ||||||||  || ||| ||||| |||||||||||    
T  21672950 tagtggttagaattcacctttctcaagatgaataagtggatgtctgggattcgaacctcagcccctgcatataattatacatatccctaccaactgagct 21672851  T
Q  364 aagctcatggg 374  Q
    | |||||||||    
T  21672850 atgctcatggg 21672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 12820394 - 12820500
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| | || ||| | | |||||||| ||||||||||||||| |||| ||||||||||||    
T  12820394 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccagggttctaaccccgacccctgcatataacaatgcattgtctctgccaactgag 12820491  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  12820492 ctatgctca 12820500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 31480377 - 31480264
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 361  Q
    |||||| || ||||||| ||||  |||||||||||||||  |||||||| |||||  | |  |||| |||||||||||||||| ||||||||||||||||    
T  31480377 tagtggttagaattcacgtttt--aaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatgcattgtccctgccaactgag 31480280  T
Q  362 ctaagctcatgggaac 377  Q
    ||| | ||||| ||||    
T  31480279 ctatgttcatgagaac 31480264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 38657581 - 38657549
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||||||||||||||||||||||||||    
T  38657581 gcatataacaatgcatgtccctgccaactgagc 38657549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 51077974 - 51077875
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||| || | |||||||||||||||  |||||| | ||||| |||||||||| |||||||| |||||||   ||| ||||||||||    
T  51077974 tagtggctagaattcacccttat-aaggtgaataagtggggtgttcgagattcgaactccgacccctgcatataataatgcattgtcctaccaactgagc 51077876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 380
Target Start/End: Complemental strand, 52031257 - 52031197
Alignment:
Q  321 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaacttg 380  Q
    |||||||| |||||||  ||||||| || |||||||||||||||||||||| |||||||||    
T  52031257 ccgacccctgcatatactaatgcattgttcctgccaactgagctaagctcacgggaacttg 52031197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 15185186 - 15185079
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||| | |||||||||| |||| ||| || ||| | || ||| | | |||||||| |||||||||||||||| ||||||||||| || |    
T  15185186 tagtggctaaaattctcttttttcaaggagaatgagtagggtgtccaggattcaaaccccgacccctgcatataacaatgcatatccctgccaaccgaac 15185087  T
Q  363 taagctca 370  Q
    || |||||    
T  15185086 tatgctca 15185079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 28520745 - 28520836
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaacttg 380  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| ||||| ||| |||||    
T  28520745 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacttg 28520836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 361
Target Start/End: Complemental strand, 42432049 - 42432018
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||||||||||||||||||||||||||    
T  42432049 gcatataacaatgcatgtccctgccaactgag 42432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 378
Target Start/End: Complemental strand, 31852379 - 31852345
Alignment:
Q  344 atgtccctgccaactgagctaagctcatgggaact 378  Q
    ||||||||||||||||||||||||||| |||||||    
T  31852379 atgtccctgccaactgagctaagctcacgggaact 31852345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 36045877 - 36045831
Alignment:
Q  324 accccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  36045877 acccctgcatataacaatgcatgtccctgtcaattgagctatgctca 36045831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 48512245 - 48512199
Alignment:
Q  325 ccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||    
T  48512245 cccctgcatataacaatgcattgtccctgccaactgagctatgctca 48512199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 52556669 - 52556763
Alignment:
Q  271 tataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||||||| | ||||| |||| ||||||||||| ||||||   ||||| | |||||||| ||||||||||||| |||| |||  |||||||||||    
T  52556669 tataattctcattttttaaggagaataagtggagtgttcgatgttcgaaccccgacccctgcatataacaatgtatgttcctatcaactgagcta 52556763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 55266460 - 55266534
Alignment:
Q  301 ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggga 375  Q
    ||||||||||| ||||| |||||||||| |||||||| |||||||    || |||||||||||| ||||| ||||    
T  55266460 ggatgttcgggattcgaactccgacccctgcatataataatgcattgttctaccaactgagctatgctcacggga 55266534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 4153282 - 4153245
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg 301  Q
    |||||||||||||| | |||||||||||||||||||||    
T  4153282 tagtggctataatttatctttttcaaggtgaataagtg 4153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 8690295 - 8690214
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| |||| |||||||||||||| |||||    
T  8690295 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccttgccaactgagctatgctca 8690214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 17431418 - 17431377
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctcat 371  Q
    ||||||||||||||||||||||| |||||||| || ||||||    
T  17431418 gcatataacaatgcatgtccctgtcaactgagttatgctcat 17431377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 20753114 - 20753224
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||| | ||| |||| ||||| | ||| ||||  ||||||| ||||||| | ||| ||||||||||    
T  20753114 tagtggctagaattcaccttat--aaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataatgcattttcctaccaactgagc 20753211  T
Q  363 taagctcatggga 375  Q
    || ||||| ||||    
T  20753212 tatgctcacggga 20753224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 29785240 - 29785151
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||||||||||  ||| |||| ||||| | ||  ||||  ||||| ||| || ||||||||||||||||||||| |||||    
T  29785240 tttttcaaggtgaataagtggggtgtccggggttcgaaccccagcccctacatattacagtgtatgtccctgccaactgagctatgctca 29785151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 32885795 - 32885689
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||| || |||||||||| |  |||||||||||||||  ||| || | ||||| |||||||||| |||||||| |||||||   ||| |||||||||    
T  32885795 ttagtggatagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcctaccaactgag 32885698  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  32885697 ctatgctca 32885689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 43049987 - 43050032
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctcatggga 375  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||||    
T  43049987 gcatataacaatgcatgttcctgtcaactgagctatgctcacggga 43050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 44449522 - 44449571
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagctaagctcatgggaacttg 380  Q
    ||||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  44449522 catataacaatgcatgttcctgctaactgagttatgctcacgggaacttg 44449571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 17859884 - 17859779
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||| | |||||||| ||||| ||||| ||||  | ||||| |||||||   ||| ||||||||||    
T  17859884 tagtggctagaattcaccttat--aaggtgaataagtgaggtgttcggggttcgaactccggcccctacgtataataatgcattgtcctaccaactgagc 17859787  T
Q  363 taagctca 370  Q
    || |||||    
T  17859786 tatgctca 17859779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 377
Target Start/End: Complemental strand, 32887237 - 32887125
Alignment:
Q  266 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||| ||||||| ||||||||| | |||||||||  ||| |||  ||||| |  |||| ||||||||||| |||| | ||||||| |||||||||||    
T  32887237 gtggctaaaattcacatttttcaagattaataagtggggtgtccggagttcgaaccacgactccggcatataaaaatgtacgtccctgtcaactgagcta 32887138  T
Q  365 agctcatgggaac 377  Q
     | ||| ||||||    
T  32887137 tgatcacgggaac 32887125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 36257800 - 36257695
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||| ||||  || ||||||||||||  ||| |||| ||||| | ||| |||| ||||| || | ||| ||||||||||||||||||    
T  36257800 tagtggctagaattcacttttt--aaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatacaatactgcttgtccctgccaactgagc 36257703  T
Q  363 taagctca 370  Q
    || |||||    
T  36257702 tatgctca 36257695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 40261221 - 40261177
Alignment:
Q  334 ataacaatgcatgtccctgccaactgagctaagctcatgggaact 378  Q
    |||| ||||||||||||||| |||||||||| ||||| |||||||    
T  40261221 ataataatgcatgtccctgctaactgagctatgctcacgggaact 40261177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 220337 - 220463
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  220337 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 220436  T
Q  351 tgccaactgagctaagctcatgggaac 377  Q
    |||||||||||||| ||||| ||||||    
T  220437 tgccaactgagctatgctcacgggaac 220463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 689492 - 689618
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  689492 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 689591  T
Q  351 tgccaactgagctaagctcatgggaac 377  Q
    |||||||||||||| ||||| ||||||    
T  689592 tgccaactgagctatgctcacgggaac 689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 733960 - 734086
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  733960 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 734059  T
Q  351 tgccaactgagctaagctcatgggaac 377  Q
    |||||||||||||| ||||| ||||||    
T  734060 tgccaactgagctatgctcacgggaac 734086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 253 - 377
Target Start/End: Original strand, 857856 - 857982
Alignment:
Q  253 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  857856 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 857955  T
Q  351 tgccaactgagctaagctcatgggaac 377  Q
    |||||||||||||| ||||| ||||||    
T  857956 tgccaactgagctatgctcacgggaac 857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 216145 - 216248
Alignment:
Q  275 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  216145 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 216244  T
Q  374 gaac 377  Q
    ||||    
T  216245 gaac 216248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 692705 - 692808
Alignment:
Q  275 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  692705 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 692804  T
Q  374 gaac 377  Q
    ||||    
T  692805 gaac 692808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 696914 - 697017
Alignment:
Q  275 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  696914 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 697013  T
Q  374 gaac 377  Q
    ||||    
T  697014 gaac 697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 729768 - 729871
Alignment:
Q  275 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  729768 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 729867  T
Q  374 gaac 377  Q
    ||||    
T  729868 gaac 729871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 853663 - 853766
Alignment:
Q  275 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  853663 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 853762  T
Q  374 gaac 377  Q
    ||||    
T  853763 gaac 853766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 14011025 - 14011132
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||| ||||| ||| ||||||||||| |||| || | ||||| ||||| |||| ||||||||||||||||||||||||||||||| |    
T  14011025 tagtggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaactccggcccctgcatataacaatgcatgtccctgccaactgaac 14011124  T
Q  363 taagctca 370  Q
    || |||||    
T  14011125 tatgctca 14011132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 358
Target Start/End: Original strand, 22847250 - 22847344
Alignment:
Q  265 agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 358  Q
    |||||||| ||||||||||||| |||||||||||||| | |||  ||| ||||| |  ||||||| |||||||||||||||||||||||||||||    
T  22847250 agtggctagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatgcatgtccctgccaact 22847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 18577208 - 18577114
Alignment:
Q  277 tcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||||||||||||||| | |||| ||| || || | |||||||| |||||||||||| |||||||||| |||||||| || |||||    
T  18577208 tcacctttttcaaggtgaataagtgaaatgtttggggtttgaaccccgacccctgcatataacaatacatgtccctgtcaactgagttatgctca 18577114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 26773699 - 26773784
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 358  Q
    ||||||| ||||| ||| |||||||||||| |||||||| ||||| |||||||| | ||||||||||||||||| ||||| |||||    
T  26773699 aattcacattttttaagatgaataagtggaatgttcggggttcgaactccgacctctgcatataacaatgcatgcccctgtcaact 26773784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 28979128 - 28979027
Alignment:
Q  270 ctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagct 368  Q
    ||||||||||| ||||| |||||||||||||| | ||| |||| |||||  |||||||||  |||||||||||||||||||||  ||||||| ||| |||    
T  28979128 ctataattcacattttttaaggtgaataagtgaggtgtccggggttcgaattccgacccctacatataacaatgcatgtccctatcaactgaactatgct 28979029  T
Q  369 ca 370  Q
    ||    
T  28979028 ca 28979027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 7345526 - 7345422
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatg 372  Q
    ||||||||||||| |||||||||||||||  |||| ||  || ||   |||||||| |||||||| ||||||||||||||||||||||| || ||||| |    
T  7345526 aattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtccctgccaactgagttatgctcacg 7345427  T
Q  373 ggaac 377  Q
    |||||    
T  7345426 ggaac 7345422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 26657975 - 26657857
Alignment:
Q  254 gtcaagtag-ttagtggctataattcacctttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    ||||||||| |||||||||  ||||||| |||||||||||||||||||||   |||  ||| ||||| | |||  ||| |||||||||||||||||||||    
T  26657975 gtcaagtagcttagtggcttgaattcac-tttttcaaggtgaataagtgggggtgtctggggttcgaaccccggtccctgcatataacaatgcatgtccc 26657877  T
Q  351 tgccaactgagctaagctca 370  Q
    | |||||||||||| |||||    
T  26657876 taccaactgagctatgctca 26657857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 373
Target Start/End: Complemental strand, 12560150 - 12560030
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| || |||||| |||| |||||||||||||| |||||||| | |||| | | ||||| | || ||||| |||||||||||||  ||| |||    
T  12560150 gtcaagtagtctaatggctagaattgacctttttcaaggtaaataagtgaggtgtttgaggttcgaaccccaacccctgcatataacaatg-ttgttcct 12560052  T
Q  352 gccaactgagctaagctcatgg 373  Q
    ||||||||||||| ||||||||    
T  12560051 gccaactgagctatgctcatgg 12560030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 44254299 - 44254388
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctg 352  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||| | |  ||||| | ||||| || |||||||| ||||||||||||||    
T  44254299 tagtggctaaaattcacatttttcaaggtgaataagtaggatgtccagagttcgaaccccgactcccgcatataataatgcatgtccctg 44254388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 32940351 - 32940402
Alignment:
Q  313 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||| |||||||||| | ||||||||||||||||||||| |||||||||||    
T  32940351 ttcgaactccgacccctgtatataacaatgcatgtccctgtcaactgagcta 32940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 39432376 - 39432422
Alignment:
Q  324 accccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||    
T  39432376 acccctgcatataacattgcatgtccctgccaactgagctatgctca 39432422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 364
Target Start/End: Complemental strand, 11900674 - 11900573
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||| ||||||||||||||||| |||||||||||    || |  ||| | |  | ||||| |||||||| ||||||||| ||||||||||||||    
T  11900674 ttagtggctagaattcacctttttcaagatgaataagtggggtatctgtgttcaaacctcaacccctgcatataataatgcatgttcctgccaactgagc 11900575  T
Q  363 ta 364  Q
    ||    
T  11900574 ta 11900573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 16808409 - 16808462
Alignment:
Q  324 accccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 377  Q
    ||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||    
T  16808409 acccctgcatataataatgcatgtccctgctaactgagttatgctcatgggaac 16808462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 29937268 - 29937211
Alignment:
Q  313 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| ||||| |||| |||||||||||| ||||||||| |||||||||||| |||||    
T  29937268 ttcgaactccggcccctgcatataacaatacatgtccctaccaactgagctatgctca 29937211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 574313 - 574257
Alignment:
Q  283 ttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataaca 339  Q
    |||||||||||||||||||| ||| |||| ||||| | |||||||| ||||||||||    
T  574313 ttttcaaggtgaataagtgggtgtccggggttcgaaccccgacccctgcatataaca 574257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 357
Target Start/End: Complemental strand, 30542870 - 30542777
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaac 357  Q
    |||||| || |||||||||| |  ||||||||||| |||| |||||||| ||||| | |||| ||| ||||||||||||||| |||||||||||||    
T  30542870 tagtggttagaattcaccttat--aaggtgaataaatggaatgttcggggttcgaaccccgatccctgcatataacaatgcattgtccctgccaac 30542777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 39208845 - 39208893
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg 301  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  39208845 gtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtg 39208893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 19925096 - 19925163
Alignment:
Q  274 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaa 340  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||| | ||||||||  ||||||||||    
T  19925096 aattcaccttttttaaggtgaataagtgaggtgttcgggattcgaaccccgacccctacatataacaa 19925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 25470833 - 25470940
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |||||||||||||| | || ||| || | ||||| | |||||||  | |||||| ||||||||| |||| ||||||||     
T  25470833 tagtggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaaccccgacccatgaatataataatgcatgttcctgtcaactgagt 25470932  T
Q  363 taagctca 370  Q
    || |||||    
T  25470933 tatgctca 25470940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Complemental strand, 6325377 - 6325339
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  6325377 tagtggctagaattcacctttttcaaggtgaatgagtgg 6325339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 14012719 - 14012612
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactga 360  Q
    |||||||||| |||||||||| |  || ||||||||||||  ||| |||  ||||| | ||| |||| |||||||||||||||| |||||||||||||||    
T  14012719 ttagtggctaaaattcaccttat--aatgtgaataagtggggtgtccggacttcgaaccccggcccctgcatataacaatgcattgtccctgccaactga 14012622  T
Q  361 gctaagctca 370  Q
     ||| |||||    
T  14012621 actatgctca 14012612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 17987438 - 17987537
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||||||||||||| |  ||||||||||| |||  ||| |||| ||||| ||||| |||| |||||||| |||||||   ||| ||||||||||    
T  17987438 tagtggctataattcaccttat--aaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataatgcattatcctaccaactgagc 17987535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 301
Target Start/End: Original strand, 27821891 - 27821929
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtg 301  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  27821891 ttagtggctagaattcaccttttttaaggtgaataagtg 27821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 2800100 - 2800019
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  2800100 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 2800019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 43468694 - 43468804
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||  ||||| | ||||||||  |||||||||||||||   ||| ||||||||||    
T  43468694 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcattgtcctaccaactgagc 43468791  T
Q  363 taagctcatggga 375  Q
    || ||||| ||||    
T  43468792 tatgctcacggga 43468804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 30500576 - 30500481
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 358  Q
    |||||||||| ||||||  |||||||| |||||||||||||| || |||  ||||| | || |||||  ||||||| |||||||||| |||||||||    
T  30500576 ttagtggctagaattcat-tttttcaatgtgaataagtggatggtccggagttcgaaccccaacccctacatataataatgcatgtctctgccaact 30500481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 35301208 - 35301252
Alignment:
Q  321 ccgaccccggcatataacaatgcat-gtccctgccaactgagcta 364  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||    
T  35301208 ccgacccctgcatataataatgcattgtccctgccaactgagcta 35301252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 36593233 - 36593201
Alignment:
Q  332 atataacaatgcatgtccctgccaactgagcta 364  Q
    |||||||||||||||||||| ||||||||||||    
T  36593233 atataacaatgcatgtccctaccaactgagcta 36593201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 39208910 - 39208958
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 373  Q
    |||| |||||||| ||||||||||||||| ||||||||||  |||||||    
T  39208910 cccctgcatataataatgcatgtccctgcaaactgagctagactcatgg 39208958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 10020456 - 10020557
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||||||||||||| ||||||||||| | ||||||| ||||| | || ||||| ||||||||||||||||||||||| |||||||||    
T  10020456 tagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtccctgtcaactgagc 10020555  T
Q  363 ta 364  Q
    ||    
T  10020556 ta 10020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 7392282 - 7392400
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||| || |||||||| ||| | | || ||| | |||||||||||||||||| |||    
T  7392282 gtcaagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgttcct 7392381  T
Q  352 gccaactgagctaagctca 370  Q
    ||||| ||||||| |||||    
T  7392382 gccaattgagctatgctca 7392400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 364
Target Start/End: Complemental strand, 35195952 - 35195850
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||| ||| || |||||||||||||||||||||| |||  |||||||| ||||| | ||| |||| |||||||| |||||||||||||||||||||||    
T  35195952 ttagtgactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgag 35195853  T
Q  362 cta 364  Q
    |||    
T  35195852 cta 35195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 375
Target Start/End: Complemental strand, 11808158 - 11808034
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttc-aaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    |||||||||| |||| | || ||||||| |||||| |||||||||||||||  ||| |||| ||||| | |||||||| |||||||||||||||||||||    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccc 11808059  T
Q  351 tgccaactgagctaagctcatggga 375  Q
    | |||| ||||||||||||| ||||    
T  11808058 taccaattgagctaagctcacggga 11808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 44409308 - 44409202
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||||||||||||||||||||||| || |||||||| ||||| | |||||||  |||||||| ||||||||||||||| |||||||     
T  44409308 tagtggttagaattcacctttttcaaggtgaataagtggggtgttcggg-ttcgaaccccgacccttgcatataataatgcatgtccctgctaactgagt 44409210  T
Q  363 taagctca 370  Q
    || |||||    
T  44409209 tatgctca 44409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 370
Target Start/End: Original strand, 41012577 - 41012675
Alignment:
Q  274 aattcacctttttc-aaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||  ||||||||||||||| ||||||||| ||||| ||||| ||||  ||||||||||||||||||||| |||| ||||||| |||||    
T  41012577 aattcacctttttttaaggtgaataagtgggatgttcggggttcgagctccggcccctacatataacaatgcatgtccctaccaattgagctatgctca 41012675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 363
Target Start/End: Complemental strand, 9351130 - 9351042
Alignment:
Q  276 ttcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 363  Q
    ||||| ||||| |||||||||||||||| | |||||| ||||| |||||||||| |||||||| ||| |||||||||| ||||||||||    
T  9351130 ttcactttttttaaggtgaataagtggagttttcggggttcgaactccgacccctgcatataataatacatgtccctgtcaactgagct 9351042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 357
Target Start/End: Original strand, 32309125 - 32309229
Alignment:
Q  255 tcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctg 352  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||||||| |||  |||  | | ||||| |||||||||| |||||||||||||||||||||||    
T  32309125 tcaagtagtctagtggctagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtccctg 32309224  T
Q  353 ccaac 357  Q
    |||||    
T  32309225 ccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 253 - 370
Target Start/End: Complemental strand, 32814947 - 32814828
Alignment:
Q  253 ggtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 350  Q
    |||||||||||  ||||| || |||||||||||||  |  |||||||||||  ||| |||| ||||| |||||||||| |||||||| ||||||||||||    
T  32814947 ggtcaagtagtccagtggttaaaattcacctttttttatatgaataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccc 32814848  T
Q  351 tgccaactgagctaagctca 370  Q
    | |||||||||||| |||||    
T  32814847 taccaactgagctatgctca 32814828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 43635707 - 43635589
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||| |||||||| |||||||| |||  |||||||||||||||  ||| |||| ||||| | |||||| | ||||||||||||||||||  ||    
T  43635707 gtcaagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttct 43635608  T
Q  352 gccaactgagctaagctca 370  Q
    |||||||||| || |||||    
T  43635607 gccaactgagttatgctca 43635589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 21285342 - 21285448
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | ||| |||| |||||||||||||||| ||||||||||||||||    
T  21285342 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgag 21285439  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  21285440 ctatgctca 21285448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 1649260 - 1649153
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||| | || ||||| | | | |||| ||||| |||||||||| ||||| ||||||||||    
T  1649260 tagtggctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagc 1649161  T
Q  363 taagctca 370  Q
    || |||||    
T  1649160 tatgctca 1649153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 7162665 - 7162748
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 356  Q
    ||||||||||||||||| |||||||||||| | ||| |  ||||| | |||||||| |||||||||||||||| ||||||||||    
T  7162665 aattcacctttttcaagatgaataagtggaatattcagagttcgaaccccgacccctgcatataacaatgcatatccctgccaa 7162748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 20527443 - 20527518
Alignment:
Q  291 gtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagcta 364  Q
    ||||||||||| | |||||||| ||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  20527443 gtgaataagtgaggtgttcggggttcgaactccggcccctgcatataacaatgcattgtccctgccaactgagcta 20527518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 38328553 - 38328667
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||| || |||| |||||||||||||||||||| |||  |||| ||| ||||| |||| |  || ||||||||||||| |||||||| |||| ||||    
T  38328553 ttagtggttagaattaacctttttcaaggtgaataaatggggtgtttggggttcgaactcc-agtcctgcatataacaatgtatgtccctaccaattgag 38328651  T
Q  362 ctaagctcatgggaac 377  Q
    ||| ||||||||||||    
T  38328652 ctatgctcatgggaac 38328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 43712299 - 43712409
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||| ||||| |||||||||||| | ||||||||  | | || | ||||| | |||||||| | |||||||||||||||||||| |||||||||    
T  43712299 ttagtggctagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtccctaccaactgag 43712398  T
Q  362 ctaagctcatg 372  Q
     || |||||||    
T  43712399 ttatgctcatg 43712409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 1513594 - 1513498
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    ||||||||| ||||||| |||| ||||||||||||||||  |||||||  ||||| |  | |||||  ||||||||||||||||||||||||||||||    
T  1513594 tagtggctaaaattcacatttt-caaggtgaataagtggggtgttcggtgttcgaacctcaacccctacatataacaatgcatgtccctgccaactga 1513498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 17305444 - 17305484
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  17305444 gcatataacaatgcatgtccctgccaactgagctatgctca 17305484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 16814795 - 16814704
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||| |||||||| ||||||||||||| |||  ||| ||||| | ||||||||  ||||||| ||||||||| | ||||||||||||||    
T  16814795 aattcacatttttcaaagtgaataagtggagtgtctggggttcgaaccccgacccctacatataataatgcatgttcttgccaactgagcta 16814704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 26734258 - 26734296
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26734258 tagtggctagaattcacctttttcaaggtgaataagtgg 26734296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 35498505 - 35498408
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||| |||||||||||||||| |||||||||| || ||| ||   || || | || ||||| |||||||| |||||||||||||||||||||||    
T  35498505 tagtggctagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaac-ccaacccctgcatataataatgcatgtccctgccaactgag 35498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 48175071 - 48174974
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||||| |||||||||||| ||||| ||||||||||  ||| |||| ||||| | ||| |||| | |||||| ||||||||||| ||||||||||||||    
T  48175071 tggctagaattcacctttt-caaggggaataagtggggtgtccggggttcgaacaccggcccctgtatataataatgcatgtccttgccaactgagcta 48174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 7465529 - 7465460
Alignment:
Q  308 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 377  Q
    |||| ||||| | ||| |||| |||||||| |||||||||| ||||||||||||||| ||||| ||||||    
T  7465529 cggggttcgaaccccggcccctgcatataataatgcatgtctctgccaactgagctatgctcacgggaac 7465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 21877673 - 21877769
Alignment:
Q  278 cacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggg 374  Q
    ||||||||||||| |||||||||||  |||||| | ||||| | || | ||| |||||||||||| ||||| |||||||||| ||||| |||||||||    
T  21877673 cacctttttcaagatgaataagtggggtgttcgaggttcgaacccc-agccctgcatataacaatccatgtacctgccaacttagctatgctcatggg 21877769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 29658261 - 29658367
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | ||| |||| ||||||||||||||| |||| ||||||| ||||    
T  29658261 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcgctgccaattgag 29658358  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  29658359 ctatgctca 29658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 32534630 - 32534683
Alignment:
Q  321 ccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggg 374  Q
    |||||||| ||||||||| ||| |||||||||||||||||| || |||||||||    
T  32534630 ccgacccctgcatataaccatgtatgtccctgccaactgagttatgctcatggg 32534683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 38451969 - 38451863
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  || ||||||||||||  ||| |||| ||||| | ||| |||| |||||||||||||||| ||||||| ||||||||    
T  38451969 tagtggctagaattcaccttat--aatgtgaataagtggggtgtccgggattcgaaccccggcccctgcatataacaatgcattgtccctgtcaactgag 38451872  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  38451871 ctatgctca 38451863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 41139168 - 41139087
Alignment:
Q  291 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    ||||||||||| | ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  41139168 gtgaataagtgaagtgtccgggattcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctca 41139087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 351
Target Start/End: Complemental strand, 5773239 - 5773149
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga---tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||| || ||| |||||||||||||||||||||||||    ||| |||| ||||| |  |||||||  |||||||||||||||||||||    
T  5773239 tagtgggtagaatccacctttttcaaggtgaataagtgggatgtgtccggggttcgaacctcgacccctacatataacaatgcatgtccct 5773149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 8147240 - 8147280
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  8147240 gcatataacaatgcatgtccctgccaattgagctatgctca 8147280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 19924874 - 19924774
Alignment:
Q  265 agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 363  Q
    |||||||| ||||||| ||||| |||||||||||||||  | |  ||| ||||| |||  ||  | |||||||| |||||||||||||||||||||||||    
T  19924874 agtggctagaattcactttttttaaggtgaataagtggggtatatgggattcgaactctcacttctgcatataataatgcatgtccctgccaactgagct 19924775  T
Q  364 a 364  Q
    |    
T  19924774 a 19924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 23799350 - 23799310
Alignment:
Q  321 ccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  23799350 ccgacccctgcatataacaatgcatgtctctgccaactgag 23799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 24579263 - 24579311
Alignment:
Q  255 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||    
T  24579263 tcaagtagtttagtggatagaattcacctttttcaaggtgaataagtgg 24579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 25304275 - 25304179
Alignment:
Q  274 aattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||| ||| || |||||||| |||  | | ||| | |||| ||||| |||||||||||| ||||| |||||||||||| ||| |||||    
T  25304275 aattcaccttttttaagatggataagtgggtgtatgaggttcaaactccaacccctgcatataacaattcatgttcctgccaactgaactacgctca 25304179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 3246541 - 3246580
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  3246541 catataacaatgcatgtccctgtcaactgagctatgctca 3246580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 24427456 - 24427373
Alignment:
Q  279 acctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||| ||||||||||||||| |||  | |||||| ||||| |   |||||| ||||||||||||||||||| ||||||||||||    
T  24427456 acctatttcaaggtgaataaatggggtattcggggttcgaaccttgacccctgcatataacaatgcatgtctctgccaactgag 24427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 37410528 - 37410575
Alignment:
Q  323 gaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||| |||||||||||||||||||| | |||||||||||| |||||    
T  37410528 gacccctgcatataacaatgcatgtccttaccaactgagctatgctca 37410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 46716439 - 46716331
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||||||||||||||||| |  ||||| |||||||||  ||||| || ||||| | |||||| | |||||||| |||||||   ||| ||||||||||    
T  46716439 tagtggctataattcaccttat--aaggtaaataagtggggtgttcagggttcgaaccccgacctctgcatataataatgcattgtcctaccaactgagc 46716342  T
Q  363 taagctcatgg 373  Q
    || ||||||||    
T  46716341 tatgctcatgg 46716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 14818410 - 14818460
Alignment:
Q  321 ccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctca 370  Q
    |||||||| |||||||| |||||| |||||||||||||||||||| |||||    
T  14818410 ccgacccctgcatataataatgcactgtccctgccaactgagctatgctca 14818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 15265408 - 15265458
Alignment:
Q  321 ccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctca 370  Q
    |||||||| |||||||| |||||| |||||||||||||||||||| |||||    
T  15265408 ccgacccctgcatataataatgcactgtccctgccaactgagctatgctca 15265458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 25818393 - 25818282
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||| ||||||||||||||| |  | |||||||||||||| |||||||| ||||| ||||  |||| |||||||| |||||||   ||| |||||||||    
T  25818393 ttagttgctataattcaccttat--atggtgaataagtggagtgttcggggttcgaactccagcccctgcatataataatgcattatcctaccaactgag 25818296  T
Q  362 ctaagctcatggga 375  Q
     || ||||| ||||    
T  25818295 ttatgctcacggga 25818282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 28968680 - 28968718
Alignment:
Q  274 aattcacctttttcaaggtgaataagtg-gatgttcggg 311  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28968680 aattcacctttttcaaggtgaataagtgagatgttcggg 28968718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 41853511 - 41853593
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgca 344  Q
    |||| ||||| ||||| |||||||||||| |||||||| || | |||||| ||||| ||||| || | |||||||||||||||    
T  41853511 ttaggggctagaattctcctttttcaaggagaataagtggggtattcggggttcgaactccggcctctgcatataacaatgca 41853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 43209453 - 43209411
Alignment:
Q  319 ctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||| |||| |||||||||||||||||| |||||||||||||    
T  43209453 ctccggcccctgcatataacaatgcatgttcctgccaactgag 43209411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 30152848 - 30152742
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||| |||||| ||| |  |||||||||||||||  |||||||| ||||| | ||||||||   |||||| |||||||   ||| |||||||||    
T  30152848 ttagtggctagaattcatcttat--aaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcctaccaactgag 30152751  T
Q  362 ctaagctca 370  Q
    |||||||||    
T  30152750 ctaagctca 30152742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 31475889 - 31475942
Alignment:
Q  325 ccccggcatataacaatgca-tgtccctgccaactgagctaagctcatgggaac 377  Q
    |||| |||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  31475889 cccctgcatataataatgcaatgtccctgccaactgagctatgctcacgggaac 31475942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 38032911 - 38032940
Alignment:
Q  332 atataacaatgcatgtccctgccaactgag 361  Q
    ||||||||||||||||||||||||||||||    
T  38032911 atataacaatgcatgtccctgccaactgag 38032940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 10474518 - 10474606
Alignment:
Q  283 ttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||||| | ||| ||||  |||| | |||||||| ||||||||||||| ||||| || |||||||| ||| |||||    
T  10474518 tttttaaggtgaataagtgaggtgtccgggggtcgaaccccgacccctgcatataacaatgtatgtctctaccaactgaactatgctca 10474606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 14772341 - 14772436
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 377  Q
    ||||| ||||||||| || ||| ||||||||||| || | ||| ||||  ||| |||||||||||||| |||||||||||| || ||||| ||||||    
T  14772341 ttttttaaggtgaatcagcggagtgttcgggttt-gaaccccggcccctacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaac 14772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 15222793 - 15222888
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 377  Q
    ||||| ||||||||| || ||| ||||||||||| || | ||| ||||  ||| |||||||||||||| |||||||||||| || ||||| ||||||    
T  15222793 ttttttaaggtgaatcagcggagtgttcgggttt-gaaccccggcccctacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaac 15222888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 1244677 - 1244570
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||||||||||| || ||| |||| ||||| | || ||||| ||||||| ||||| ||||||||||||||||| |    
T  1244677 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaactgaac 1244578  T
Q  363 taagctca 370  Q
    || |||||    
T  1244577 tatgctca 1244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 362
Target Start/End: Original strand, 14307680 - 14307780
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||| ||||||| ||||| || ||||||||||||  |||||||| ||||| |  ||||||| |||||||||||||||||||||| |||||||||    
T  14307680 ttagtggctagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtccctaccaactgag 14307779  T
Q  362 c 362  Q
    |    
T  14307780 c 14307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 364
Target Start/End: Original strand, 44487752 - 44487855
Alignment:
Q  262 gttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    |||||||| || ||||||||||||| ||||||||||||| |||||| |||| ||||| ||||| |||  |||||||| |||||||||||||  |||||||    
T  44487752 gttagtggttagaattcaccttttttaaggtgaataagtgggatgtccggggttcgaactccggcccttgcatataataatgcatgtccctatcaactga 44487851  T
Q  361 gcta 364  Q
    ||||    
T  44487852 gcta 44487855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 12206606 - 12206505
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataag-tggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||||||||||||||||||||||||  || |||||||| ||||| | |||||||| | |||||| |||| |||| |||||||||| |||    
T  12206606 tagtggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccctgaatataataatgtatgttcctgccaactaagc 12206507  T
Q  363 ta 364  Q
    ||    
T  12206506 ta 12206505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 377
Target Start/End: Original strand, 39334857 - 39334982
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||  ||  ||||| | ||  |||| | |||||| |||||||||||||    
T  39334857 gtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcatgtccct 39334956  T
Q  352 gccaactgagctaagctcatgggaac 377  Q
    |||||||||| || ||||| ||||||    
T  39334957 gccaactgagttatgctcacgggaac 39334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 39118501 - 39118394
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||| ||||||| |||| ||||||||||  |||||||| ||||| ||| | |||| ||||||||||||| |||||||| |||||||||     
T  39118501 tagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaactctggcccctgcatataacaatgtatgtccctaccaactgagt 39118402  T
Q  363 taagctca 370  Q
    || |||||    
T  39118401 tacgctca 39118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 4529749 - 4529835
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtc 348  Q
    ||||| |||| |||||||||||||||| |||||||||| || |||||||  ||||| |||||||||| |||||||| ||||||||||    
T  4529749 ttagttgctaaaattcacctttttcaaagtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcatgtc 4529835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 11133182 - 11133076
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | |||||||| ||||||||||||||| ||||||| |||||||||    
T  11133182 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgag 11133085  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  11133084 ctatgctca 11133076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 36413865 - 36413780
Alignment:
Q  267 tggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||| |||||||||||||||| |||||||||| || ||| | || ||||| ||||| |||| ||||||||||||||||||||||    
T  36413865 tggctaaaattcacctttttcaaagtgaataagtggggtgtccagggttcgaactccggcccctgcatataacaatgcatgtccct 36413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 5029087 - 5029194
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || |||||| |||||||||||||||||||| || |||||| | ||||| ||||| || | |||||||| ||||||| | ||| ||||||||||    
T  5029087 tagtgggtagaattcatctttttcaaggtgaataagtggggtgttcgagattcgaactccggcctctgcatataataatgcatatacctaccaactgagc 5029186  T
Q  363 taagctca 370  Q
    || |||||    
T  5029187 tatgctca 5029194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 32944160 - 32944069
Alignment:
Q  274 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||| |||||||||||||||||||| | |||||||  || || ||||||  || |||||||| ||||||||||| ||||||||||||||    
T  32944160 aattcacttttttcaaggtgaataagtgaggtgttcggagtttgaactccgattcctgcatataataatgcatgtccatgccaactgagcta 32944069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 34107393 - 34107275
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||| || |||  ||  ||||| |  | ||||| ||||||||  || |||||||||    
T  34107393 gtcaagtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccct 34107294  T
Q  352 gccaactgagctaagctca 370  Q
    ||||||||||||| |||||    
T  34107293 gccaactgagctatgctca 34107275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 2057577 - 2057482
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||||| |||||||||||||||  ||| |||| ||||| ||| ||||| | |||||||||||| || |||||||||||||||||| |||||    
T  2057577 aattcaccttttttaaggtgaataagtggggtgtccgggattcgaactc-gaccctg-catataacaatgtatatccctgccaactgagctatgctca 2057482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 18065352 - 18065255
Alignment:
Q  274 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||| |||||||||||||||||||  | |||||||| ||||| |  | ||||| ||||||||||||||||| | || |||||||||||| |||||    
T  18065352 aattcacatttttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgagctatgctca 18065255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 20684329 - 20684272
Alignment:
Q  313 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| |||||||||| |||||||| |||| ||||||||| |||||||||||||||||    
T  20684329 ttcgaactccgacccctgcatataataatgtatgtccctgtcaactgagctaagctca 20684272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 361
Target Start/End: Complemental strand, 40471259 - 40471163
Alignment:
Q  266 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    ||||||||||||| ||||||| |||  ||||||||||  |||||||| |||||   || ||||| |||||||| |||||||||||||| ||||||||    
T  40471259 gtggctataattctcctttttgaagaagaataagtggggtgttcgggattcgaatcccaacccctgcatataataatgcatgtccctgtcaactgag 40471163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 357
Target Start/End: Complemental strand, 10602114 - 10602019
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcg-ggtttcgatctccgaccccggcatataacaatgcatgtccctgccaac 357  Q
    ||||||||| |||||| ||||||||| ||||||||||||  ||| || || ||||| | ||| |||| ||||||||||||||||||| ||||||||    
T  10602114 tagtggctagaattcatctttttcaaagtgaataagtggggtgtccgtgggttcgaaccccgtcccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 18089837 - 18089730
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||| ||| ||||||| |||||||||||||||||||| | |||  ||| ||||| ||| | |||| |||||  | |||||||||| |||||||||||||    
T  18089837 tagtgactagaattcacgtttttcaaggtgaataagtgaggtgtctggggttcgaactctggcccctgcatagtataatgcatgtctctgccaactgagc 18089738  T
Q  363 taagctca 370  Q
    || |||||    
T  18089737 tatgctca 18089730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 20942085 - 20942192
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||||| | |||  ||| ||||| ||||  ||||  |||||||  ||||||||||||    
T  20942085 gtcaagtagtctagtgactagaattcacttttttcaaggtgaataagtgaggtgtctggggttcgaactccatcccctacatataattatgcatgtccct 20942184  T
Q  352 gccaactg 359  Q
    ||||||||    
T  20942185 gccaactg 20942192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 26975286 - 26975392
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 363  Q
    |||||| || |||| |||||||| || |||||||| ||| ||| |||| ||||| | ||  || | ||||||| ||||||||||||||||||||||| |     
T  26975286 tagtggttagaattaaccttttttaaagtgaataactgggtgtccggggttcgaaccccagcctctgcatatagcaatgcatgtccctgccaactgaacc 26975385  T
Q  364 aagctca 370  Q
    |||||||    
T  26975386 aagctca 26975392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 29664709 - 29664594
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||||||| |||||||||| |  ||| |||||||||||  ||| |||| || || | |||||||| ||||||||||||||| |||||||||||| ||||    
T  29664709 tagtggctagaattcaccttat--aagatgaataagtggggtgtccgggatttgaaccccgacccctgcatataacaatgcattgtccctgccaattgag 29664612  T
Q  362 ctaagctcatgggaactt 379  Q
    ||| ||||| ||| ||||    
T  29664611 ctatgctcacggggactt 29664594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 36386158 - 36386208
Alignment:
Q  321 ccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcat 371  Q
    |||||||| |||||||||||||||| ||||| |||||||||||| ||||||    
T  36386158 ccgacccctgcatataacaatgcatatccctaccaactgagctatgctcat 36386208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 17896856 - 17896819
Alignment:
Q  340 atgcatgtccctgccaactgagctaagctcatgggaac 377  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17896856 atgcatgtccctgccaactgagctatgctcatgggaac 17896819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 370
Target Start/End: Complemental strand, 22355189 - 22355084
Alignment:
Q  266 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||| |||||||||||| ||||||||||||||||  |||  ||  |||||    | ||||| ||| |||||||||||||||| ||||||||||||||    
T  22355189 gtggctagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtccttgccaactgagcta 22355090  T
Q  365 agctca 370  Q
     |||||    
T  22355089 tgctca 22355084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 41195931 - 41196037
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||||||| |||||||||| ||  |||||||||| || | |||||||| ||||| ||||| || | ||||||||||||||| | |||||| ||||||||    
T  41195931 tagtggctagaattcaccttatt--aggtgaataaatgaggtgttcgggattcgaactccggcctctgcatataacaatgcattatccctgtcaactgag 41196028  T
Q  362 ctaagctca 370  Q
    ||| |||||    
T  41196029 ctatgctca 41196037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 407576 - 407480
Alignment:
Q  274 aattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||| ||||||||| ||||||| |||    ||||| ||||| |||||||||  |||||||||||||||| ||| ||||||| |||  |||||||    
T  407576 aattcacttttttcaagctgaataaatggggtgtcggggttcgaactccgacccttgcatataacaatgcatatccttgccaaccgagtcaagctca 407480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 2935875 - 2935811
Alignment:
Q  313 ttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctcatgggaa 376  Q
    ||||| ||||| |||| ||||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  2935875 ttcgaactccggcccccgcatataacaatgcattgttcctgccaactgagctatgctcacgggaa 2935811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 370
Target Start/End: Original strand, 31088991 - 31089091
Alignment:
Q  271 tataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctc 369  Q
    |||||||||| |||||||| | |||||||||| ||||||||| ||| | ||||||||||  |||| || |||||||||| ||  |||||||| || ||||    
T  31088991 tataattcacttttttcaaagcgaataagtgggatgttcgggattcaaactccgacccctacataaaataatgcatgtctctatcaactgaggtatgctc 31089090  T
Q  370 a 370  Q
    |    
T  31089091 a 31089091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 20972826 - 20972901
Alignment:
Q  282 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 356  Q
    ||||||||||| ||| |||||| |||||||| ||||| ||||| | || |||||||| ||||||||||| ||||||    
T  20972826 tttttcaaggtcaatcagtggagtgttcggggttcgaactccggctcctgcatataataatgcatgtccatgccaa 20972901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 36277757 - 36277796
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  36277757 catataacaatgcatgtcactgccaactgagctatgctca 36277796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 44132608 - 44132651
Alignment:
Q  321 ccgaccccggcatataacaatgcatgtccctgccaactgagcta 364  Q
    |||||| | ||||||||||||||||||| |||||||||||||||    
T  44132608 ccgacctctgcatataacaatgcatgtctctgccaactgagcta 44132651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 356
Target Start/End: Complemental strand, 10767108 - 10767002
Alignment:
Q  253 ggtcaagtagtta-gtggctataattcacctt-tttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtcc 349  Q
    |||||| |||||| ||||||| |||||||||| ||| ||| |||||||||| | |||||||  ||||| | ||||||||  ||||||||||||  |||||    
T  10767108 ggtcaattagttaagtggctagaattcaccttcttttaagctgaataagtgaggtgttcggagttcgaaccccgacccctacatataacaatgattgtcc 10767009  T
Q  350 ctgccaa 356  Q
    |||||||    
T  10767008 ctgccaa 10767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 29713076 - 29713178
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| |||||| |||||| ||||| ||||||| || |||  ||| ||||| | || | ||| ||||||||||||| |||||| |||||||||| |    
T  29713076 tagtggctagaattcatcttttttaaggtaaataagtagggtgtctggggttcgaaccccaatccctgcatataacaatgtatgtccgtgccaactgaac 29713175  T
Q  363 taa 365  Q
    |||    
T  29713176 taa 29713178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Complemental strand, 32677437 - 32677399
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  32677437 tagtgactataattcacctttttcaaagtgaataagtgg 32677399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 360
Target Start/End: Complemental strand, 34376583 - 34376553
Alignment:
Q  330 gcatataacaatgcatgtccctgccaactga 360  Q
    |||||||||||||||||||||||||||||||    
T  34376583 gcatataacaatgcatgtccctgccaactga 34376553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 35352459 - 35352513
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 379  Q
    |||| ||||||||  ||||||||||||||||||||||||| | ||| ||||||||    
T  35352459 cccccgcatataattatgcatgtccctgccaactgagctatgttcacgggaactt 35352513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 36345158 - 36345252
Alignment:
Q  255 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtc 348  Q
    |||||||||| |||||||| || |||||||||||||| ||||||||||||   || |  ||||| || ||  ||| |||||||||||||||||||    
T  36345158 tcaagtagtttagtggctagaactcacctttttcaagatgaataagtggagtgtctgagttcgaactacggtccctgcatataacaatgcatgtc 36345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 37065431 - 37065533
Alignment:
Q  274 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatg 372  Q
    ||||||| ||||| ||||||||| |||| | || ||||  ||||| | |||||| | |||||||||||||||||||| | ||||| |||||| ||||| |    
T  37065431 aattcacattttttaaggtgaattagtgaggtgatcggagttcgaaccccgaccactgcatataacaatgcatgtccataccaacagagctatgctcacg 37065530  T
Q  373 gga 375  Q
    |||    
T  37065531 gga 37065533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 41305053 - 41305091
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  41305053 tagtggctcgaattcacctttttcaaggtgaataagtgg 41305091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 5772906 - 5772861
Alignment:
Q  325 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||| |||||||||||| ||||||| |||||||||||||| |||||    
T  5772906 cccctgcatataacaatacatgtccttgccaactgagctatgctca 5772861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 6496479 - 6496446
Alignment:
Q  331 catataacaatgcatgtccctgccaactgagcta 364  Q
    ||||||||||||||||||||| ||||||||||||    
T  6496479 catataacaatgcatgtcccttccaactgagcta 6496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 6650041 - 6649959
Alignment:
Q  276 ttcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 360  Q
    ||||||||||| || |||||||||||| |||| ||  ||||| ||| || ||| ||||||||||| | |||||||| ||||||||    
T  6650041 ttcaccttttttaaagtgaataagtggctgtttgg--ttcgaactctgatccctgcatataacaacgtatgtccctaccaactga 6649959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 24586717 - 24586648
Alignment:
Q  301 ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||||||||| ||||| ||||| || | ||||| || |||||||||||||  |||||||||||| ||||    
T  24586717 ggatgttcggggttcgaactccggccgctgcatacaataatgcatgtccctttcaactgagctaaactca 24586648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 30877008 - 30876951
Alignment:
Q  313 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    ||||| |||||||||| |||||||||||| |||| |||| |||||| ||||| |||||    
T  30877008 ttcgaactccgacccctgcatataacaatacatgaccctaccaactaagctatgctca 30876951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 35352380 - 35352429
Alignment:
Q  254 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  35352380 gtcaagtagtctagtgactagaattcacatttttcaaggtgaataagtgg 35352429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 2394970 - 2394998
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||||||||||||||||||||||    
T  2394970 aattcacctttttcaaggtgaataagtgg 2394998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 3037611 - 3037708
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 361  Q
    ||||| ||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | ||| |||| ||||||||||||||| |||||| ||||||||||    
T  3037611 tagtgcctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcccagccaactgag 3037708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 5807764 - 5807792
Alignment:
Q  274 aattcacctttttcaaggtgaataagtgg 302  Q
    |||||||||||||||||||||||||||||    
T  5807764 aattcacctttttcaaggtgaataagtgg 5807792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 34020 - 34127
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| ||||| ||||||| || | ||||||||||| ||| |||  ||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  34020 tagtggctagaattctccttttttaaagagaataagtggagtgtccggaattcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagc 34119  T
Q  363 taagctca 370  Q
    || |||||    
T  34120 tatgctca 34127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 1158 - 1040
Alignment:
Q  254 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || |||  ||| ||||| | ||  ||||  |||||||  ||||||||||||    
T  1158 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccct 1059  T
Q  352 gccaactgagctaagctca 370  Q
     |||||||||||| |||||    
T  1058 accaactgagctatgctca 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2098 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 625 - 702
Alignment:
Q  288 aaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagcta 364  Q
    ||||||||||||||| |||| ||| ||||| |||| |||||  |||||||||||||| ||||||||||||||||||||    
T  625 aaggtgaataagtgggtgtttgggattcgaactccaacccctacatataacaatgcattgtccctgccaactgagcta 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 440507 - 440406
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    |||||| || ||||||||||||| ||||||||||||| || ||||||||  |||| | ||| ||||  ||||||| ||||||||| ||||||||||||||    
T  440507 tagtggttagaattcaccttttttaaggtgaataagtggggtgttcgggagtcgaaccccggcccctacatataataatgcatgttcctgccaactgagc 440408  T
Q  363 ta 364  Q
    ||    
T  440407 ta 440406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 4568 - 4521
Alignment:
Q  323 gaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4568 gacccctgcatataacaatgcatgtccctgccaactgagctatgctca 4521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 4588 - 4541
Alignment:
Q  323 gaccccggcatataacaatgcatgtccctgccaactgagctaagctca 370  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4588 gacccctgcatataacaatgcatgtccctgccaactgagctatgctca 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 37315 - 37429
Alignment:
Q  264 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 362  Q
    ||||||||| | ||||| ||||| |||||||||||||||  ||| | |||||||| |  || |||| | ||| |||||||||||||||| ||||||||||    
T  37315 tagtggctaaatttcacattttttaaggtgaataagtggggtgtccaggtttcgaacatcggcccctgtataaaacaatgcatgtccctaccaactgagc 37414  T
Q  363 taagctcatgggaac 377  Q
    || ||||| ||||||    
T  37415 tatgctcacgggaac 37429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 371
Target Start/End: Complemental strand, 67270 - 67161
Alignment:
Q  263 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 361  Q
    |||||||||| ||||||| ||||||||||||| |||||||  ||| | || ||||| | ||  ||||  ||||||||||||||| ||||| |||||||||    
T  67270 ttagtggctagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagcccctacatataacaatgcatatccctcccaactgag 67171  T
Q  362 ctaagctcat 371  Q
    ||| ||||||    
T  67170 ctatgctcat 67161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 374
Target Start/End: Original strand, 245484 - 245554
Alignment:
Q  304 tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggg 374  Q
    |||||||||||||| | |||||||| |||||||||| |||| || ||||||||||||| || | |||||||    
T  245484 tgttcgggtttcgaaccccgacccctgcatataacagtgcacgttcctgccaactgagttatgttcatggg 245554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 351
Target Start/End: Complemental strand, 7163 - 7076
Alignment:
Q  265 agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 351  Q
    |||||||| ||||||||||||||||| |||||||||||| |||  | | |||||   | |||||| |||||||||||||||| |||||    
T  7163 agtggctagaattcacctttttcaagatgaataagtggagtgtatgaggttcgaaacctgacccctgcatataacaatgcatatccct 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 22507 - 22454
Alignment:
Q  288 aaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaat 341  Q
    ||||||||||||||| |||||||| ||||| ||| ||||||  |||||||||||    
T  22507 aaggtgaataagtgggtgttcggggttcgaactctgacccctacatataacaat 22454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 19392 - 19477
Alignment:
Q  274 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 358  Q
    |||||||||||||||| |||||||| || | ||| || | ||| ||| || |||||  ||||||||||||||||||| ||||||||    
T  19392 aattcacctttttcaaagtgaataaatgaggtgtccgaggttcaatccccaacccctacatataacaatgcatgtccgtgccaact 19477  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 12613 - 12565
Alignment:
Q  323 gaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 370  Q
    |||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  12613 gacccctgcatataataatgcattgtccctgccaactgagctatgctca 12565  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 14434 - 14394
Alignment:
Q  198 ttttttaaaaaaggaaccaaatcaaactaactagtttggat 238  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  14434 ttttttaaaaaaggaaccaaatcaaacaaattggtttggat 14394  T

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