View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3605_low_76 (Length: 225)

Name: NF3605_low_76
Description: NF3605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3605_low_76
NF3605_low_76
[»] chr8 (21 HSPs)
chr8 (15-205)||(4730593-4730783)
chr8 (15-206)||(4693446-4693637)
chr8 (39-206)||(4754732-4754899)
chr8 (22-206)||(4684802-4684986)
chr8 (15-205)||(4825686-4825876)
chr8 (15-171)||(4772605-4772761)
chr8 (18-205)||(4741279-4741466)
chr8 (15-206)||(4719689-4719880)
chr8 (18-205)||(4886445-4886632)
chr8 (15-185)||(10450896-10451066)
chr8 (15-185)||(10455322-10455492)
chr8 (17-206)||(4722370-4722564)
chr8 (19-185)||(4918901-4919067)
chr8 (15-206)||(4709499-4709693)
chr8 (18-206)||(4800777-4800965)
chr8 (18-205)||(4865695-4865882)
chr8 (15-170)||(21436173-21436328)
chr8 (15-205)||(4908775-4908965)
chr8 (18-206)||(4846019-4846207)
chr8 (15-172)||(4896977-4897135)
chr8 (22-202)||(4790412-4790592)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 8e-85; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 4730593 - 4730783
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4730593 cagagaacaggaaacacaaataagaaaaatgatatttacagctttgggataattctatttgagttggtcactgggaagaaagcaatagtaagagaatccg 4730692  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaatt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||| ||||||||||    
T  4730693 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggggatattcaaaatgttgttgattcgaggttgcagggtgaatt 4730783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 4693446 - 4693637
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||| || |||| ||| |    
T  4693446 cagagaacaggaaacacaaataagaaaaatgatatctacagctttgggataattctatttgagttgatcactggaaagaaagcaatggtgagagcatctg 4693545  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||||||    
T  4693546 gagaaaacattcacatacttcaatgggttatttccttagttaaaggaggagatattcgaaacattgttgatacgagattgcagggtgaattc 4693637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 4754732 - 4754899
Alignment:
Q  39 aaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggagaaaacattcacatacttcaat 138  Q
    ||||||||||||||  |||||||||||||||||||||| ||| ||||| | ||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  4754732 aaaaatgatatctatagctttgggataattctatttgagttgatcacttgaaagaaagcattagtgagagcatccggagaaaacattcacatacttcaat 4754831  T
Q  139 gggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4754832 gggttattcccatagttaaaggaggagatattcaaaacattgttgatacaaggttgaagggtgaattc 4754899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 4684802 - 4684986
Alignment:
Q  22 caggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggagaaaa 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||  ||| |||| |||||||||||| |||| |||||||| |||||||     
T  4684802 caggaaacacaaataagaaaaatgatatctatagctttggtataattctatttgtgttgatcaccgggaagaaagcactagtgagagaatctggagaaag 4684901  T
Q  122 cattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||| || |||| |||||||||||    
T  4684902 cattcacatacttcaatgggttattcctattgttaaaagaggagatattcaaaacattgttgataagaagttgcagggtgaattc 4684986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 4825876 - 4825686
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||  | |||||| ||  || || ||| |    
T  4825876 cagagaacaggaaacacaaataagaaaaatgatatctacagctttgggataattctatttgagttgatcactggccaaaaagcactaacaaaagcatctg 4825777  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaatt 205  Q
    | |||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||  ||||||| ||||||||||    
T  4825776 gtgaaaaccttcacatacttgaatgggttattcccatagttgaagggggagatattcaaaatgttgttgattcgaggttgcagggtgaatt 4825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 4772761 - 4772605
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||| ||||||||| ||||||||| ||| |    
T  4772761 cagagaacaggaaacacaaataagaaaaatgatatctacagctttgggatagttctacttgaattgatcactggaaagaaagcattagtaagagcatcag 4772662  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattc 171  Q
    |||||| ||||||||||||||||||||||| ||| |||||| || ||||||||||||    
T  4772661 gagaaagcattcacatacttcaatgggttactccaatagttgaaagaggagatattc 4772605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 4741279 - 4741466
Alignment:
Q  18 agaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggag 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||  | || ||| || ||| || ||| | ||    
T  4741279 agaacaggaaacacaaataagaaaaatgatatctacagctttggaataattctatttgagttgatcactggccaaaaggcactaataaaagcatctgaag 4741378  T
Q  118 aaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaatt 205  Q
    ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||   |||||| ||||||||||    
T  4741379 aaaccattcacatacttcaatgggttattccaatagttgaaggaggagatattcaaaatgttgttgattcaaggttgcagggtgaatt 4741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 4719689 - 4719880
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||| ||    |||||| |||||| || |||||    
T  4719689 cagagaacaggaaacacaaataaaaaaaatgatatctacagctttgggataattctatttgagctgatcaccggccgaaaagcactagtaaaagcatccg 4719788  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    ||||||| ||||||||||||||||||| |||||| ||| || || | ||| |||||||||| |||||||||||||| ||| |||||||||||    
T  4719789 gagaaaaaattcacatacttcaatgggctattcctataattgaaagtggaaatattcaaaacattgttgatatgagattgcagggtgaattc 4719880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 4886632 - 4886445
Alignment:
Q  18 agaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggag 117  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||| |||||||  | |||||| || ||| || ||| | |     
T  4886632 agaaccggaaacacaaataagaaaaacgatatctacagctttgggattattctatttgagttgatcactggccaaaaagcactaataaaagcatctgaaa 4886533  T
Q  118 aaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaatt 205  Q
    ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||| ||||||||||    
T  4886532 aaaccattcacatacttgaatgggttattcccatagttgaaggaggagatattcaaaatgttgttgatttaaggttgcagggtgaatt 4886445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 10450896 - 10451066
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| || ||| ||||||| ||| |||| ||    |||||| ||| ||||| ||| |    
T  10450896 cagagaacaggaaacacaaataaaaaaaatgatatctacagctttggaattattttatttgagttgatcaccggtcgaaaagcagtagcaagagcatctg 10450995  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgat 185  Q
      ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10450996 atgaatacattcacatacttcaatgggttattcccatagttgaaggaggagatattcaaaatgttgttgat 10451066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 10455322 - 10455492
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| || ||| ||||||| ||| |||| ||    |||||| ||| ||||| ||| |    
T  10455322 cagagaacaggaaacacaaataaaaaaaatgatatctacagctttggaattattttatttgagttgatcaccggtcgaaaagcagtagcaagagcatctg 10455421  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgat 185  Q
      ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10455422 atgaatacattcacatacttcaatgggttattcccatagttgaaggaggagatattcaaaatgttgttgat 10455492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 4722370 - 4722564
Alignment:
Q  17 gagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatag---taagagaatcc 113  Q
    ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||    |||||| |||   |||||| ||||    
T  4722370 gagaacatgaagcacaaataagaaaaatgatatctacagctttgggataattctatttgagttgatcactggtcgaaaagcactagtactaagagcatcc 4722469  T
Q  114 ggagaaaacattcacatacttc--aatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    ||||||||||||||||||||||  |||||| |||||| ||| |  |||| ||| |||||||||| |||||||||||||| ||| |||||||||||    
T  4722470 ggagaaaacattcacatacttcaaaatgggctattcctataatcgaaggcggaaatattcaaaacattgttgatatgagattgcagggtgaattc 4722564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 4919067 - 4918901
Alignment:
Q  19 gaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggaga 118  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||| | || |||    ||||||||||||||| | | |||||    
T  4919067 gaacgggaaacacaaataaaaaaaatgatatctacagctttgggataattctatttgtgttgataaccgggcgtcaagcaatagtaagagcagctggaga 4918968  T
Q  119 aaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgat 185  Q
    ||| |||||||||||| |||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  4918967 aaatattcacatacttgaatgggttattcccatagttgaaggaggagatattcagaaagttgttgat 4918901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 4709499 - 4709693
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaat---agtaagagaat 111  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||  | |||||| |   |  ||||| ||    
T  4709499 cagagaacaggaaacacaaataaaaaaaatgatatctacagctttgggataattctatttgagttgatcactggccaaaaagcacttgcacaaagagcat 4709598  T
Q  112 ccggagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    |||||||||| ||||||||||||||||||| |||||| ||| |  || | ||  |||||||||| || ||||||||||| ||| |||||||||||    
T  4709599 ccggagaaaaaattcacatacttcaatgggctattcctataatcgaaagcgggaatattcaaaacatagttgatatgagattgcagggtgaattc 4709693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 4800965 - 4800777
Alignment:
Q  18 agaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggag 117  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||  || ||||||| ||||||||| || ||| || | | |  |    
T  4800965 agaacaggaaacacaaacaagaaaaatgatatttacagctttggaattattctatttgagctgatcactggcaagaaagcactaataaaagcacctgatg 4800866  T
Q  118 aaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    ||| |||||||||||||||||||||| ||||| || | ||||| |||||||||||||| |||||||||| ||||||| | |||||||||    
T  4800865 aaaccattcacatacttcaatgggttcttcccttaataaaaggtggagatattcaaaacattgttgatacgaggttgcaaggtgaattc 4800777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 4865882 - 4865695
Alignment:
Q  18 agaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggag 117  Q
    |||||| |||| ||||| || ||||||||||||||| |||| || || ||||||||||| ||| ||||||| || ||||||||||  |||| ||| |  |    
T  4865882 agaacaagaaagacaaacaaaaaaaatgatatctacagcttcggaattattctatttgagttgatcactggaaaaaaagcaatagcgagagtatctgatg 4865783  T
Q  118 aaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaatt 205  Q
    || || |||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||   |||||| ||||||||||    
T  4865782 aataccttcacatactgcaatgggttattcccatagttgaaggaggaaatattcaaaatgttgttgattcaaggttgcagggtgaatt 4865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 21436328 - 21436173
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||  ||| |||||||  |  |||||||| |||||| | | |    
T  21436328 cagagaacaggaaacacaaataaaaaaaatgatatctacagctttggaataattctatttgtgttgatcactggtcatgaagcaataataagagcagctg 21436229  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatatt 170  Q
    |||||||||||||||||||| |||||||||||||  || || ||| ||||||||||    
T  21436228 gagaaaacattcacatacttgaatgggttattcctgtaattgaagaaggagatatt 21436173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 4908965 - 4908775
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccg 114  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||  ||  ||| |||     | ||||||||||||| | | |    
T  4908965 cagagaacaggaaacacaaataaaaaaaatgatatctacagctttggaataattctatttgtgttaatcagtggtcgtcacgcaatagtaagagcagctg 4908866  T
Q  115 gagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaatt 205  Q
    ||||||| |||||||||||| | |||||||||||  ||||| || ||||||||||||||||| ||||||||   |||||| ||||||||||    
T  4908865 gagaaaatattcacatacttgattgggttattcctttagttgaaagaggagatattcaaaatgttgttgattcaaggttgcagggtgaatt 4908775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 4846207 - 4846019
Alignment:
Q  18 agaacaggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggag 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||  || ||||||| ||||||||| |  ||| || | | |  |    
T  4846207 agaacaggaaacacaaataagaaaaatgatatctacagctttggaattattctatttgagctgatcactggcaagaaagcactcataaaagcacctgatg 4846108  T
Q  118 aaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtgaattc 206  Q
    ||| |||||||||||||||||||||||||||  || | ||||| |||||||||||||| ||| |||||  ||||||  | |||||||||    
T  4846107 aaaccattcacatacttcaatgggttattccattaataaaaggtggagatattcaaaacattattgatgcgaggttacaaggtgaattc 4846019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 4897135 - 4896977
Alignment:
Q  15 cagagaacaggaaacacaaataagaaaaa-tgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatcc 113  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||  ||| |||||||     |||||||||||| || | |     
T  4897135 cagagaacaggaaacacaaataaaaaaaaatgatatctacagctttggaataattctatttgtgttgatcactggtcgtcaagcaatagtaaaagcagct 4897036  T
Q  114 ggagaaaacattcacatacttcaatgggttattcccatagttaaaggaggagatattca 172  Q
    |||||||||||||| ||||||||| |||||||||||||| || |||| |||||||||||    
T  4897035 ggagaaaacattcatatacttcaacgggttattcccataattgaaggtggagatattca 4896977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 4790592 - 4790412
Alignment:
Q  22 caggaaacacaaataagaaaaatgatatctacggctttgggataattctatttgaattggtcactgggaagaaagcaatagtaagagaatccggagaaaa 121  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||| |||| || ||||||||| | | ||||  ||  | ||||||    
T  4790592 caggaaacacaaataagaaaaatgatatctttagctttgggataattctatttgagttgatcaccggaaagaaagcacttgaaagatcatatgaagaaaa 4790493  T
Q  122 cattcacatacttcaatgggttattcccatagttaaaggaggagatattcaaaatattgttgatatgaggttgaagggtga 202  Q
     ||||| ||||| ||||||||| |||||||| |||||| |||| |||||||||| ||| | |||  ||||||| |||||||    
T  4790492 tattcatatactgcaatgggttgttcccataattaaagcaggaaatattcaaaacattatggattcgaggttgcagggtga 4790412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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