View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3606_low_14 (Length: 378)

Name: NF3606_low_14
Description: NF3606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3606_low_14
NF3606_low_14
[»] chr5 (17 HSPs)
chr5 (18-359)||(19648206-19648551)
chr5 (301-358)||(13862122-13862179)
chr5 (301-348)||(35813293-35813340)
chr5 (301-348)||(42553191-42553238)
chr5 (301-350)||(3535985-3536034)
chr5 (303-352)||(22867039-22867088)
chr5 (301-342)||(30119955-30119996)
chr5 (302-354)||(11246539-11246591)
chr5 (302-350)||(17178271-17178319)
chr5 (301-348)||(25660909-25660956)
chr5 (300-354)||(36045179-36045234)
chr5 (298-348)||(38361479-38361529)
chr5 (301-354)||(7147064-7147117)
chr5 (301-354)||(40250222-40250275)
chr5 (303-354)||(4674860-4674912)
chr5 (303-343)||(14077312-14077352)
chr5 (305-353)||(38040267-38040315)
[»] chr8 (3 HSPs)
chr8 (301-358)||(32940355-32940412)
chr8 (298-349)||(13320503-13320554)
chr8 (301-354)||(18577110-18577163)
[»] chr4 (16 HSPs)
chr4 (301-358)||(2565257-2565315)
chr4 (304-354)||(53180397-53180447)
chr4 (299-348)||(43049984-43050033)
chr4 (301-348)||(49039496-49039543)
chr4 (301-343)||(33359814-33359856)
chr4 (302-343)||(30116588-30116629)
chr4 (304-348)||(56531287-56531332)
chr4 (303-354)||(8690212-8690264)
chr4 (301-361)||(15185075-15185135)
chr4 (304-348)||(20610739-20610783)
chr4 (303-343)||(24039887-24039926)
chr4 (301-348)||(30615994-30616042)
chr4 (300-344)||(35379250-35379294)
chr4 (301-348)||(36008271-36008319)
chr4 (304-348)||(36045830-36045874)
chr4 (301-348)||(48512195-48512243)
[»] chr1 (9 HSPs)
chr1 (301-348)||(52961133-52961180)
chr1 (301-361)||(9527422-9527483)
chr1 (301-354)||(9768854-9768907)
chr1 (301-350)||(24119303-24119352)
chr1 (301-348)||(18003813-18003860)
chr1 (307-358)||(47141847-47141898)
chr1 (301-358)||(38021248-38021306)
chr1 (301-354)||(42908768-42908821)
chr1 (301-348)||(30632435-30632483)
[»] chr7 (8 HSPs)
chr7 (302-343)||(3246542-3246583)
chr7 (301-348)||(48174964-48175011)
chr7 (302-348)||(37410532-37410578)
chr7 (302-343)||(17305446-17305487)
chr7 (304-348)||(38451862-38451907)
chr7 (301-348)||(21285404-21285452)
chr7 (300-343)||(22660736-22660780)
chr7 (302-358)||(32814825-32814881)
[»] chr3 (11 HSPs)
chr3 (301-358)||(48894096-48894153)
chr3 (305-358)||(51017791-51017844)
chr3 (301-348)||(16874241-16874288)
chr3 (301-355)||(6951834-6951888)
chr3 (302-343)||(3461780-3461821)
chr3 (302-343)||(30745787-30745828)
chr3 (298-358)||(44976567-44976628)
chr3 (300-341)||(46416281-46416322)
chr3 (304-348)||(3993758-3993802)
chr3 (307-343)||(24890076-24890112)
chr3 (300-344)||(38507644-38507688)
[»] chr6 (6 HSPs)
chr6 (298-346)||(9422827-9422875)
chr6 (301-348)||(8175993-8176040)
chr6 (301-348)||(34524872-34524919)
chr6 (301-354)||(2945592-2945646)
chr6 (301-343)||(9443519-9443561)
chr6 (302-343)||(9051347-9051388)
[»] chr2 (6 HSPs)
chr2 (301-341)||(22355080-22355120)
chr2 (301-348)||(5772857-5772904)
chr2 (301-343)||(41195998-41196041)
chr2 (301-348)||(21970490-21970538)
chr2 (303-343)||(34644541-34644581)
chr2 (300-348)||(39334932-39334980)
[»] scaffold0712 (1 HSPs)
scaffold0712 (302-361)||(4518-4577)
[»] scaffold0709 (1 HSPs)
scaffold0709 (302-361)||(4538-4597)
[»] scaffold0168 (1 HSPs)
scaffold0168 (301-348)||(34084-34131)
[»] scaffold0219 (1 HSPs)
scaffold0219 (302-343)||(21020-21061)
[»] scaffold0118 (1 HSPs)
scaffold0118 (300-348)||(37379-37427)


Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 359
Target Start/End: Original strand, 19648206 - 19648551
Alignment:
Q  18 atgtgacgtctacatcatatttttaacagatgagctaaaacttatgattctgtatctttatattttaattagtctagctaataatttagatttagctgtc 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19648206 atgtgatgtctacatcatatttttaacagatgagctaaaacttatgattctgtatctttatattttaattagtctagctaataatttagatttagctgtc 19648305  T
Q  118 caaaaaagtctatttgtgaaaaattat-----nnnnnnnnggaatagcatggttgtaaagcacaacttatgctattttatttgatatttatatcggtcnn 212  Q
    |||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      
T  19648306 caaaaaagtctatttgtgaaaaattattaaaaaaaaaaaaggaatagcatggttgtaaagcacaacttatgctattttatttgatatttatattggtctt 19648405  T
Q  213 nnnnnnnnnggcagaatttatattggtctttttaatagcataaatatatacgtaacttaaatattatataaaatcaatggagatgagtcccgtgagcata 312  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19648406 tttttttttggcagaatttatattggtctttttaatagcataaatatatacgtaacttaaata-tatataaaatcaatggagatgagttccgtgagcata 19648504  T
Q  313 gctcagttgacaaggaaatgcattgttatatacaggagtcggagttt 359  Q
    |||||||||| | ||||||||||||||||||||||| ||| ||||||    
T  19648505 gctcagttgatagggaaatgcattgttatatacaggggtcagagttt 19648551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 13862122 - 13862179
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtt 358  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| |||| |||||||||    
T  13862122 cccgtgagcatagttcagttgacatggatatgcattgttatatgcaggggtcggagtt 13862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 35813340 - 35813293
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  35813340 cccgtgagcatagctcagttgacagggacatgcattgttatatgcagg 35813293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 42553238 - 42553191
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||||    
T  42553238 cccgtgagcatagctcagttgacaacgacatgcattgttatatgcagg 42553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 3536034 - 3535985
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggag 350  Q
    ||||||||||||| ||||||| || ||| |||||||||||||||||||||    
T  3536034 cccgtgagcatagttcagttggcagggacatgcattgttatatacaggag 3535985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 22867088 - 22867039
Alignment:
Q  303 cgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtc 352  Q
    |||||||||| ||||||||||||||| ||||||| |||||| ||||||||    
T  22867088 cgtgagcataactcagttgacaaggacatgcattattatatgcaggagtc 22867039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 30119955 - 30119996
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttata 342  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  30119955 cccgtgagcatagctcagttgacaaggacatgcattattata 30119996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 11246591 - 11246539
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    |||||||||||||||||||| || ||| |||||||||||||| |||| |||||    
T  11246591 ccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcgg 11246539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 350
Target Start/End: Complemental strand, 17178319 - 17178271
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggag 350  Q
    |||| |||||||||||||||||| ||| ||||||||||||||| |||||    
T  17178319 ccgttagcatagctcagttgacagggacatgcattgttatatataggag 17178271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 25660909 - 25660956
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| |||||||||||||| ||||    
T  25660909 cccgtgagcatagctcagttggcagggatatgcattgttatatgcagg 25660956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 36045234 - 36045179
Alignment:
Q  300 tcccgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcgg 354  Q
    ||||||||||||||||||||||||||| | |||||||| |||||| |||| |||||    
T  36045234 tcccgtgagcatagctcagttgacaagaacaatgcattattatatgcaggggtcgg 36045179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 38361479 - 38361529
Alignment:
Q  298 agtcccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||||||||| ||| || |||||| |||| ||||    
T  38361479 agtcccgtgagcatagctcagttgacagggacatacattgtgatatgcagg 38361529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 7147117 - 7147064
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    |||||||||||||||||||||  ||||| ||||||| |||||| |||| |||||    
T  7147117 cccgtgagcatagctcagttggtaaggacatgcattattatatgcaggggtcgg 7147064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 40250275 - 40250222
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    ||||||||||||||||||||| ||   | |||||||||||||| ||||||||||    
T  40250275 cccgtgagcatagctcagttggcagtaacatgcattgttatatgcaggagtcgg 40250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 354
Target Start/End: Complemental strand, 4674912 - 4674860
Alignment:
Q  303 cgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcgg 354  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||| |||||    
T  4674912 cgtgagcatagctcagttgacagggacaatgcattattatatgcaggggtcgg 4674860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 14077352 - 14077312
Alignment:
Q  303 cgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  14077352 cgtgagcatagatcagttgacagggatatgcattgttatat 14077312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 38040267 - 38040315
Alignment:
Q  305 tgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcg 353  Q
    ||||||||||||||||| || ||| |||||||||||||| |||| ||||    
T  38040267 tgagcatagctcagttggcagggacatgcattgttatatgcaggggtcg 38040315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 32940412 - 32940355
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtt 358  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  32940412 cccgtgagtatagctcagttgacagggacatgcattgttatatacaggggtcggagtt 32940355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 13320554 - 13320503
Alignment:
Q  298 agtcccgtgagcatagctcagttgacaaggaaatgcattgttatatacagga 349  Q
    |||||||||||||||||| | |||||||||| |||||||||||||| |||||    
T  13320554 agtcccgtgagcatagctgaattgacaaggacatgcattgttatatgcagga 13320503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 18577110 - 18577163
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    |||||||||||| ||||||||||| ||| ||| |||||||||| |||| |||||    
T  18577110 cccgtgagcataactcagttgacagggacatgtattgttatatgcaggggtcgg 18577163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 2565257 - 2565315
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcggagtt 358  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||||    
T  2565257 cccgtgagcatagctcagttgacagggacaatgcattgttatatgcaggggtcggagtt 2565315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 354
Target Start/End: Complemental strand, 53180447 - 53180397
Alignment:
Q  304 gtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    |||| ||||||| |||||||| ||| |||||||||||||||||||||||||    
T  53180447 gtgaacatagcttagttgacagggacatgcattgttatatacaggagtcgg 53180397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 43050033 - 43049984
Alignment:
Q  299 gtcccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    |||||||||||||||||||||||||| | | |||||||||||||| ||||    
T  43050033 gtcccgtgagcatagctcagttgacaggaacatgcattgttatatgcagg 43049984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 49039543 - 49039496
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| |||||||||||||| ||||    
T  49039543 cccgtgagcatagctcagttggcagggacatgcattgttatatgcagg 49039496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 33359814 - 33359856
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||||||||||||||||||||| ||| || |||||||||||    
T  33359814 cccgtgagcatagctcagttgacatggacattcattgttatat 33359856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 30116629 - 30116588
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    ||||||| |||||||||||||||| || ||||||||||||||    
T  30116629 ccgtgagtatagctcagttgacaatgacatgcattgttatat 30116588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 56531332 - 56531287
Alignment:
Q  304 gtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||    
T  56531332 gtgagcatagctcagttggcaaggacaatgcattgttatatgcagg 56531287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 8690212 - 8690264
Alignment:
Q  303 cgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcgg 354  Q
    ||||||||||||||||||| |||||| |||||||| |||||| |||| |||||    
T  8690212 cgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggtcgg 8690264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 15185075 - 15185135
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtttga 361  Q
    ||||||||||||| || |||| || ||| |||||||||||||| |||| ||||| ||||||    
T  15185075 cccgtgagcatagttcggttggcagggatatgcattgttatatgcaggggtcggggtttga 15185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 20610739 - 20610783
Alignment:
Q  304 gtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    |||||||||||||||||| || ||| |||||||||||||| ||||    
T  20610739 gtgagcatagctcagttggcagggacatgcattgttatatgcagg 20610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 24039887 - 24039926
Alignment:
Q  303 cgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  24039887 cgtgagcatagctcagttgac-aggacatgcattgttatat 24039926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 30615994 - 30616042
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||| ||||    
T  30615994 cccgtgagcatagctcaattgacatggacaatgcattgttatatgcagg 30616042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 35379250 - 35379294
Alignment:
Q  300 tcccgtgagcatagctcagttgacaaggaaatgcattgttatata 344  Q
    ||||||||| ||||||||||||||| | | |||||||||||||||    
T  35379250 tcccgtgagtatagctcagttgacaggaacatgcattgttatata 35379294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 36008271 - 36008319
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| ||||    
T  36008271 cccgtgagcatagctcagttggcagggacaatgcattgttatatgcagg 36008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 36045830 - 36045874
Alignment:
Q  304 gtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    |||||||||||||| |||||| ||| |||||||||||||| ||||    
T  36045830 gtgagcatagctcaattgacagggacatgcattgttatatgcagg 36045874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 48512195 - 48512243
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| ||||    
T  48512195 cccgtgagcatagctcagttggcagggacaatgcattgttatatgcagg 48512243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 52961180 - 52961133
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  52961180 cccgtgagcatagctcagttggcaaggacatgcattgttatatgcagg 52961133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 9527422 - 9527483
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcggagtttga 361  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| |||| ||||| ||||||    
T  9527422 cccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggtttga 9527483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 9768907 - 9768854
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    ||||||||||||||||||||| || ||| |||||||||||||| |||| |||||    
T  9768907 cccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcgg 9768854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 24119303 - 24119352
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggag 350  Q
    ||||||| ||||| |||||||||||||| |||||||||||||| ||||||    
T  24119303 cccgtgaacatagttcagttgacaaggacatgcattgttatatgcaggag 24119352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 18003813 - 18003860
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| |||||||||||||| ||||    
T  18003813 cccgtgagcatagctcagttggcagggacatgcattgttatatgcagg 18003860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 47141898 - 47141847
Alignment:
Q  307 agcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtt 358  Q
    |||||| ||||||||||| ||| |||||||||||||| |||| |||||||||    
T  47141898 agcataactcagttgacagggacatgcattgttatatgcaggggtcggagtt 47141847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 38021248 - 38021306
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcggagtt 358  Q
    ||||||||||||||||||||| |||||| |||||||| |||||| |||| | |||||||    
T  38021248 cccgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggccggagtt 38021306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 42908768 - 42908821
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgg 354  Q
    ||||||||| ||||||||||| || ||| |||||||||||||| |||| |||||    
T  42908768 cccgtgagcttagctcagttggcagggacatgcattgttatatgcaggggtcgg 42908821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 30632483 - 30632435
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  30632483 cccgtgatcatagctcagttgacagggacaatgcattgttatatgcagg 30632435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 3246583 - 3246542
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  3246583 ccgtgagcatagctcagttgacagggacatgcattgttatat 3246542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 48174964 - 48175011
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    |||||||| |||||||||||| |||||| ||||||| |||||||||||    
T  48174964 cccgtgagtatagctcagttggcaaggacatgcattattatatacagg 48175011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 37410578 - 37410532
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||  ||||| |||||||||||||| ||||    
T  37410578 ccgtgagcatagctcagttggtaaggacatgcattgttatatgcagg 37410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 17305487 - 17305446
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||||||||||||||||| || ||| ||||||||||||||    
T  17305487 ccgtgagcatagctcagttggcagggacatgcattgttatat 17305446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 38451862 - 38451907
Alignment:
Q  304 gtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  38451862 gtgagcatagctcagttgacagggacaatgcattgttatatgcagg 38451907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 21285452 - 21285404
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| ||||    
T  21285452 cccgtgagcatagctcagttggcagggacaatgcattgttatatgcagg 21285404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 22660736 - 22660780
Alignment:
Q  300 tcccgtgagcatagctcagttgacaagga-aatgcattgttatat 343  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||    
T  22660736 tcccgtgagcatagttcagttgacagggataatgcattgttatat 22660780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 32814825 - 32814881
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtt 358  Q
    ||||||||||||||||||||  | ||| ||||||| |||||| |||| |||||||||    
T  32814825 ccgtgagcatagctcagttggtagggacatgcattattatatgcaggggtcggagtt 32814881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 48894096 - 48894153
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtt 358  Q
    ||||||| | |||||||||||||||| | ||||||||||||||| ||| |||||||||    
T  48894096 cccgtgaacttagctcagttgacaagaacatgcattgttatatataggggtcggagtt 48894153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 51017791 - 51017844
Alignment:
Q  305 tgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtt 358  Q
    |||| |||||||||||| || ||| |||||||||||||| ||||||||||||||    
T  51017791 tgagtatagctcagttggcagggacatgcattgttatatgcaggagtcggagtt 51017844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 16874288 - 16874241
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| |||||||||||||| ||||    
T  16874288 cccgtgagcatagctcagttggcagggacatgcattgttatatgcagg 16874241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 6951888 - 6951834
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcgga 355  Q
    |||||||||||| ||||||||||| ||| ||||||| |||||| |||| ||||||    
T  6951888 cccgtgagcataactcagttgacagggacatgcattattatatgcaggggtcgga 6951834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 3461821 - 3461780
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||    
T  3461821 ccgtgagcataactcagttgacagggacatgcattgttatat 3461780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 30745828 - 30745787
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||||||||||||||||| || ||| ||||||||||||||    
T  30745828 ccgtgagcatagctcagttggcagggacatgcattgttatat 30745787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 44976567 - 44976628
Alignment:
Q  298 agtcccgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcggagtt 358  Q
    ||||||||||||||| ||||||||||| ||| |||||||| ||||||  | |||||||||||    
T  44976567 agtcccgtgagcataactcagttgacagggacaatgcattattatatgtaagagtcggagtt 44976628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 46416322 - 46416281
Alignment:
Q  300 tcccgtgagcatagctcagttgacaaggaaatgcattgttat 341  Q
    |||||||||||||||||||||| |||||| ||||||| ||||    
T  46416322 tcccgtgagcatagctcagttggcaaggacatgcattattat 46416281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 3993802 - 3993758
Alignment:
Q  304 gtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||| | ||| |||||||||||||| ||||    
T  3993802 gtgagcatagctcagttgagagggacatgcattgttatatgcagg 3993758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 24890076 - 24890112
Alignment:
Q  307 agcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  24890076 agcataactcagttgacaaggacatgcattgttatat 24890112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 38507644 - 38507688
Alignment:
Q  300 tcccgtgagcatagctcagttgacaaggaaatgcattgttatata 344  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||    
T  38507644 tcccgtgagcatagctcagttggcagggacatgcattattatata 38507688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 9422827 - 9422875
Alignment:
Q  298 agtcccgtgagcatagctcagttgacaaggaaatgcattgttatataca 346  Q
    ||||||||||||||| |||||||| || ||| |||||||||||||||||    
T  9422827 agtcccgtgagcataactcagttggcagggacatgcattgttatataca 9422875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 8175993 - 8176040
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||||||  || |||||||||||||| ||||    
T  8175993 cccgtgagcatagctcagttgacagagacatgcattgttatatgcagg 8176040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 34524872 - 34524919
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| |||||||||||||| ||||    
T  34524872 cccgtgagcatagctcagttggcagggacatgcattgttatatgcagg 34524919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 2945592 - 2945646
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacaggagtcgg 354  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| |||| |||||    
T  2945592 cccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcgg 2945646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 9443561 - 9443519
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||||||||||||||||||| | ||| ||||||||||||||    
T  9443561 cccgtgagcatagctcagttgatacggacatgcattgttatat 9443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 9051388 - 9051347
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||||||||||||| ||| |||||| ||||||||||||||    
T  9051388 ccgtgagcatagctcaattggcaaggatatgcattgttatat 9051347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 22355080 - 22355120
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttat 341  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  22355080 cccgtgagcatagctcagttggcaaggacatgcattgttat 22355120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 5772857 - 5772904
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  5772857 cccgtgagcatagctcagttggcaaggacatgtattgttatatgcagg 5772904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 41196041 - 41195998
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatat 343  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  41196041 cccgtgagcatagctcagttgacagggataatgcattgttatat 41195998  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 21970538 - 21970490
Alignment:
Q  301 cccgtgagcatagctcagttgacaagga-aatgcattgttatatacagg 348  Q
    |||||||||||||||||||||||| ||| |||||||| |||||| ||||    
T  21970538 cccgtgagcatagctcagttgacagggacaatgcattattatatgcagg 21970490  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 34644581 - 34644541
Alignment:
Q  303 cgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    ||||||||||||||||||||||  || ||||||||||||||    
T  34644581 cgtgagcatagctcagttgacagagatatgcattgttatat 34644541  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 39334980 - 39334932
Alignment:
Q  300 tcccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||| |||||||| || ||| ||||||| |||||||||||    
T  39334980 tcccgtgagcataactcagttggcagggacatgcattattatatacagg 39334932  T

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Target: scaffold0712 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 4518 - 4577
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtttga 361  Q
    |||||||||||||||||||| || ||| |||||||||||||| |||| ||| || |||||    
T  4518 ccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcagaatttga 4577  T

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Target: scaffold0709 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 4538 - 4597
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatatacaggagtcggagtttga 361  Q
    |||||||||||||||||||| || ||| |||||||||||||| |||| ||| || |||||    
T  4538 ccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcagaatttga 4597  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 34131 - 34084
Alignment:
Q  301 cccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||| || ||| |||||||||||||| ||||    
T  34131 cccgtgagcatagctcagttggcagggacatgcattgttatatgcagg 34084  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 21061 - 21020
Alignment:
Q  302 ccgtgagcatagctcagttgacaaggaaatgcattgttatat 343  Q
    |||||| ||||||||||||||||| || ||||||||||||||    
T  21061 ccgtgaacatagctcagttgacaaagacatgcattgttatat 21020  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 37427 - 37379
Alignment:
Q  300 tcccgtgagcatagctcagttgacaaggaaatgcattgttatatacagg 348  Q
    ||||||||||||||||||||||  | ||| |||||||||| ||||||||    
T  37427 tcccgtgagcatagctcagttggtagggacatgcattgttttatacagg 37379  T

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