View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3606_low_28 (Length: 244)
Name: NF3606_low_28
Description: NF3606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3606_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 30773545 - 30773681
Alignment:
| Q |
12 |
atgaatacatttgtaaatacaatcaagtgtttattttttggtgatcataaaacaatcaagtattattttatgaaagtaaaattcgaatccgataagagaa |
111 |
Q |
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| T |
30773545 |
atgaatacatttgtaaatacaatcaagtgtttattttttggtgatcataaaacaatcaagtattattttatgaaagtaaaattcgaatccgataagagaa |
30773644 |
T |
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| Q |
112 |
aataaaataacacagttttctatttgtttcaaatcta |
148 |
Q |
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| T |
30773645 |
aataaaataacacagttttctatttgtttcaaatcta |
30773681 |
T |
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