View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3607_high_11 (Length: 276)
Name: NF3607_high_11
Description: NF3607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3607_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 44997533 - 44997282
Alignment:
| Q |
7 |
cctttggctcatatccttgatcgcacaattgaggagtattttttccataagggtgcatcagttggctactaccatggggtatattcaattattcatggag |
106 |
Q |
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| T |
44997533 |
cctttggctcatatccttgatcgcacaattgaggagtattttttccataagggtgcatctgttggctactaccatggggtatattcaattattcatgcag |
44997434 |
T |
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| Q |
107 |
aaatattttcattcatttgaattttcttgacaaagaaaatttccatcaatatattttgtttacttttacatcttatgaatttttggagttgcttgtgaat |
206 |
Q |
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| T |
44997433 |
aaatattttcattcatttgaattttcttgacaaagaaaatttccatca----attttgtttacttttacatcttatgaatttttggagttgcttgtgaat |
44997338 |
T |
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| Q |
207 |
gaaggatctaactgcattgagggatgatttaatggaactgaaaccaacactgtttg |
262 |
Q |
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| T |
44997337 |
gaaggatctaactgcattgagggatgatttaatggaactgaaaccaacactgtttg |
44997282 |
T |
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