View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3607_high_8 (Length: 292)
Name: NF3607_high_8
Description: NF3607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3607_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 30621223 - 30621380
Alignment:
| Q |
16 |
agagaaacctaacaagttcatagaggccatatgatttttgtgaaagnnnnnnn--gacaaagagagatcggtgagaaagaaaactaaagtgtagactaga |
113 |
Q |
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| T |
30621223 |
agagaaacctaacaagttcatagaggccatatgatttttgtgaaagaaaaaaaaagacaaagagagatcggtgagaaagaaaactaaagtgtagactaga |
30621322 |
T |
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| Q |
114 |
ggttaaaatagaagtggtttgtgatatgcatgaagtggaggaggtagcacaagttatg |
171 |
Q |
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| T |
30621323 |
ggttaaaatagaagtggtttgtgatatgcatgaagtggaggaggtagcacaagttatg |
30621380 |
T |
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