View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3607_low_10 (Length: 289)
Name: NF3607_low_10
Description: NF3607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3607_low_10 |
 | |
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| [»] chr5 (4 HSPs) |
| |
|
| [»] chr7 (6 HSPs) |
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| [»] chr3 (2 HSPs) |
| |
|
| [»] scaffold0884 (1 HSPs) |
| | |
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| [»] scaffold0057 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 22 - 289
Target Start/End: Complemental strand, 43254756 - 43254490
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
43254756 |
tagtcgaaatgtgcgtgatgaggcagaagaaatgatccgtaattggatagaaaaaaagactctgaattctcacatctcctttgtcagcattagaagatgg |
43254657 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggtt |
221 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
43254656 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttctcatatttgtattcaaagtttaggtgtac-gcaaatcctgttttaataggtt |
43254558 |
T |
|
| Q |
222 |
ttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgt |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43254557 |
ttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgt |
43254490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 22668897 - 22668823
Alignment:
| Q |
34 |
gcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcag |
108 |
Q |
| |
|
|||||||| || |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||| |
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|
| T |
22668897 |
gcgtgatgtggttgaagaaatgatctgtaactggataggaaaaaagactctggattctcacatctcctttgtcag |
22668823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 22668792 - 22668696
Alignment:
| Q |
139 |
gttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtatt |
235 |
Q |
| |
|
|||| ||| ||||| ||||||| |||| || ||||| |||| | ||||||||||||| |||||||||| | |||| |||| ||||||| ||||||| |
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|
| T |
22668792 |
gttgttaggttatgtaatttggcttaaattctcatacttgtctccaaagtttaggtgcactgcaaatcataatttagtaggctttttctcttgtatt |
22668696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 32021190 - 32021145
Alignment:
| Q |
48 |
aagaaatgatccgtaattggataggaaaaaagactttggattctca |
93 |
Q |
| |
|
||||||| |||||||| ||||| |||||||||||| |||||||||| |
|
|
| T |
32021190 |
aagaaattatccgtaactggattggaaaaaagactgtggattctca |
32021145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 116; Significance: 5e-59; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 11896478 - 11896745
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| || |||||||| || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||| |
|
|
| T |
11896478 |
tagtcgaaatgggcgtgatgtggttgaagaaatgatccgtaactggataggaaaaaagactcaggattctcacatctcctttgtcagttatagaagatgg |
11896577 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggtt |
221 |
Q |
| |
|
||||||||||| ||| | || ||| ||||| ||||||| |||| || ||||| |||| | ||||||||||||||| |||||||| | |||| |||| | |
|
|
| T |
11896578 |
aagttgttgatagatggggtgttaggttatgtaatttggcttaaattctcatacttgtctccaaagtttaggtgtattgcaaatcataatttagtaggct |
11896677 |
T |
|
| Q |
222 |
ttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgt |
289 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||| ||||||| ||||| |||||| ||||||| |||| |
|
|
| T |
11896678 |
ttttctcttgtattggctcttcaaaattattgggaaataccccttcaatgttaacactagctgtttgt |
11896745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 259
Target Start/End: Complemental strand, 22793014 - 22792777
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| |||| ||| ||| || || |||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||| |
|
|
| T |
22793014 |
tagtcgaaatgtgtgtggtgaagccaaaaaaattatccgtaactggataggaaaaaagactttggattctcatatctcctttgtcacctttagaagatgg |
22792915 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggtt |
221 |
Q |
| |
|
||| |||||||||||| ||| ||| || || | | || | || || |||||||||| | ||||||||| ||||| || ||||| || ||| |||| | |
|
|
| T |
22792914 |
aagatgttgatgaatggattgttaggttgtgaattatgatcaaatttctcatatttgtctacaaagtttatgtgtattgtaaatcatgaattagtaggct |
22792815 |
T |
|
| Q |
222 |
ttttctattgtattggctcttcaaaattgttggggaat |
259 |
Q |
| |
|
||||| ||||||| |||||||| ||||||| |||| |
|
|
| T |
22792814 |
atttctcttgtattaactcttcaagtttgttggagaat |
22792777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 259
Target Start/End: Complemental strand, 25001886 - 25001649
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| |||| |||||| || || ||||||| ||||| |||||||||||||| ||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
25001886 |
tagtcgaaatgtgtatgatgaagccaaaaaaatgattcgtaactggataggaaaaaatactttggattctcacgtctcctttgtcttttttagaagatgg |
25001787 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggtt |
221 |
Q |
| |
|
||| |||||||||| | ||| ||| || | | | ||||| || ||||||||||||| | ||||||||| ||||| ||| |||| || | || |||| | |
|
|
| T |
25001786 |
aagatgttgatgaagggattgttaggttgtaaattatggttgaatttatcatatttgtctacaaagtttatgtgtattgcgaatcatgatctagtaggct |
25001687 |
T |
|
| Q |
222 |
ttttctattgtattggctcttcaaaattgttggggaat |
259 |
Q |
| |
|
||||| |||||||| |||| || ||| ||||||||| |
|
|
| T |
25001686 |
atttctcttgtattgaatctttaagatttttggggaat |
25001649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 281
Target Start/End: Complemental strand, 24437331 - 24437123
Alignment:
| Q |
73 |
aaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatca |
172 |
Q |
| |
|
|||||| |||||||||||||||||||||||| | |||| |||||||| ||||||||||||||| | |||| ||| |||| ||||||||||| || | | |
|
|
| T |
24437331 |
aaaaaatactttggattctcacatctcctttgttagcagtagaagatagaagttgttgatgaaagggttgttaggttataaaatttggtttattttctta |
24437232 |
T |
|
| Q |
173 |
tatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagt |
272 |
Q |
| |
|
| |||| | ||||||||| |||| || ||| | || | | ||| |||||||| |||| | |||||||||||| | |||||||| ||| ||||| || |
|
|
| T |
24437231 |
cacttgtctacaaagtttatgtgtcttgaaaagcatgatgttgtagattttttctcttgtcctagctcttcaaaatggatggggaatgccccttcaatgt |
24437132 |
T |
|
| Q |
273 |
taactctag |
281 |
Q |
| |
|
|||| |||| |
|
|
| T |
24437131 |
taacactag |
24437123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 20369549 - 20369595
Alignment:
| Q |
73 |
aaaaaagactttggattctcacatctcctttatcagcattagaagat |
119 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | ||||||||||||| |
|
|
| T |
20369549 |
aaaaaagactttggattctctcatctccttcgtaagcattagaagat |
20369595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 11788732 - 11788688
Alignment:
| Q |
48 |
aagaaatgatccgtaattggataggaaaaaagactttggattctc |
92 |
Q |
| |
|
||||||| |||||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
11788732 |
aagaaattatccgtaactggattggaaaaaagactgtggattctc |
11788688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 53 - 289
Target Start/End: Original strand, 49723076 - 49723312
Alignment:
| Q |
53 |
atgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatg |
152 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||| ||| ||||| |
|
|
| T |
49723076 |
atgatccgtaactggataggaaaaaagactttggattctcacatcttctttatcagcattagaagatgaaagctgttgatgaatgggttgttaggttatg |
49723175 |
T |
|
| Q |
153 |
gaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgtt |
252 |
Q |
| |
|
| |||||||||| || |||||||||| | ||||||||| |||| |||||||| || | | |||| ||||||| ||||| ||| |||||||||||||| |
|
|
| T |
49723176 |
aattttggtttaatttctcatatttgtctgcaaagtttatgtgttttgcaaatcatgctcttgtaggatttttcttttgtactggatcttcaaaattgtt |
49723275 |
T |
|
| Q |
253 |
ggggaataccctttcaaagttaactctagctgcttgt |
289 |
Q |
| |
|
||||||| || ||||| |||||| ||| |||||||| |
|
|
| T |
49723276 |
ggggaatgtcccttcaatgttaacgctatctgcttgt |
49723312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 259
Target Start/End: Original strand, 27429752 - 27429990
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| |||||||||||| || || ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||| | ||||||||||| |
|
|
| T |
27429752 |
tagtcgaaatgtgcgtgatgaagccaaaaaaatgatccgtaactggatagaaaaaaagacattggattctcacatctcctttgtcacctttagaagatgg |
27429851 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcata-tttgtattcaaagtttaggtgtactgcaaatcctgttttaataggt |
220 |
Q |
| |
|
||| |||||||||||| ||| ||| || || | | |||| || || ||||| ||||| | ||||||||| ||||| || ||||| || ||| ||||| |
|
|
| T |
27429852 |
aagatgttgatgaatggattgttaggttgtgaattatggtcgaatttctcatattttgtctacaaagtttatgtgtattgtaaatcatgaattagtaggt |
27429951 |
T |
|
| Q |
221 |
tttttctattgtattggctcttcaaaattgttggggaat |
259 |
Q |
| |
|
| ||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
27429952 |
tatttctcttgtattgactcttcaagtttgttggggaat |
27429990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0884 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0884
Description:
Target: scaffold0884; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 871 - 698
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| || |||||||| || ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |||||||||| |
|
|
| T |
871 |
tagtcgaaatgggcgtgatgtggttgaagatatgatccgtaattggatagaaaaaaagactctggattctcacatctcctttgtcaggtatagaagatgg |
772 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtg |
195 |
Q |
| |
|
||| |||||||| ||| |||| ||| ||||| ||||||| |||| || || ||||||| | ||||||||||||| |
|
|
| T |
771 |
aagctgttgatggatgggttgttaggttatgtaatttggcttaaattctcgtatttgtctccaaagtttaggtg |
698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 276
Target Start/End: Original strand, 11777562 - 11777764
Alignment:
| Q |
72 |
gaaaaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatc |
171 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||| |||| ||| |||| ||||||||||||| || || |
|
|
| T |
11777562 |
gaaaaaagactttggattctcacacctcctttgtcagcattagaagatgaaaactgttgatgaatgggttgttaggttat-gaatttggtttaatttctc |
11777660 |
T |
|
| Q |
172 |
atatttgtattcaaagtttaggtgtactgcaaatcctgttttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaag |
271 |
Q |
| |
|
| |||||| | | | ||| | |||| |||||||| || | ||||||||||||||| ||| |||| |||||||||||||| |||||| ||| ||||| | |
|
|
| T |
11777661 |
acatttgtttgcgaggttaatgtgtcttgcaaatcatgctctaataggttttttctcttgcgttggatcttcaaaattgtt-gggaatgccccttcaatg |
11777759 |
T |
|
| Q |
272 |
ttaac |
276 |
Q |
| |
|
||||| |
|
|
| T |
11777760 |
ttaac |
11777764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 11778269 - 11778331
Alignment:
| Q |
75 |
aaaagactttggattctcacatctcctttatcagcattagaagatggaagttgttgatgaatg |
137 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11778269 |
aaaagactttggattctcacatctcctttatcagcattagaagatggaaaccgttgatgaatg |
11778331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 19002591 - 19002449
Alignment:
| Q |
118 |
atggaagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagtttaggtgtactgcaaatcctgttttaata |
217 |
Q |
| |
|
|||||||||||||||| || |||| ||| |||| |||||||||||| || |||||||||| | |||||||| ||||| || ||||| || |||| | |
|
|
| T |
19002591 |
atggaagttgttgatggattggttgttagggtatgaaatttggtttaatttttcatatttgtctgcaaagtttctgtgtattgtaaatcatgatttagtt |
19002492 |
T |
|
| Q |
218 |
ggttttttctattgtattggctcttcaaaattgttggggaata |
260 |
Q |
| |
|
| | || || || |||| |||||||||||||| |||||||| |
|
|
| T |
19002491 |
gcctattactcttatattagctcttcaaaattgcaggggaata |
19002449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 18621377 - 18621545
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggcagaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatgg |
121 |
Q |
| |
|
|||||||| || |||||||| || | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| |
|
|
| T |
18621377 |
tagtcgaaatgagcgtgatgtggttggaaaaatgatccgtaactggataggaaaaaagactttggattctcacatctcctttgtcaaacatagaagttgg |
18621476 |
T |
|
| Q |
122 |
aagttgttgatgaatgagttgctagcttatggaatttggtttaagttatcatatttgtattcaaagttt |
190 |
Q |
| |
|
||| |||||||| ||| |||| ||| |||| ||||||| |||| | ||||| |||| | |||||||| |
|
|
| T |
18621477 |
aagatgttgatggatgggttgttagagtatgaaatttggcttaaatcctcatacttgtctgcaaagttt |
18621545 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 4928629 - 4928513
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggc-agaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctcctttatcagcattagaagatg |
120 |
Q |
| |
|
|||||||| |||||||||||| || | || ||||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||| | ||||| ||| |
|
|
| T |
4928629 |
tagtcgaaatgtgcgtgatgaagccaaaaaaaatgattcgtaactagataggaaaaaagactttggattctcacatctcctttgtcacctttagagaatg |
4928530 |
T |
|
| Q |
121 |
gaagttgttgatgaatg |
137 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
4928529 |
gaagatgttgatgaatg |
4928513 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 3340322 - 3340404
Alignment:
| Q |
22 |
tagtcgaactgtgcgtgatgaggc-agaagaaatgatccgtaattggataggaaaaaagactttggattctcacatctccttt |
103 |
Q |
| |
|
|||||||| || ||||||||| || | || ||||||||||||| ||||||| || ||||| | ||||||||||||| |||||| |
|
|
| T |
3340322 |
tagtcgaaatgcgcgtgatgaagctaaaaaaaatgatccgtaactggatagaaagaaagattgtggattctcacatttccttt |
3340404 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 77863 - 77785
Alignment:
| Q |
211 |
tttaataggttttttctattgtattggctcttcaaaattgttggggaataccctttcaaagttaactctagctgcttgt |
289 |
Q |
| |
|
|||| |||| ||||||| || |||||||||||||||||||||||| ||||||| ||||| |||||| ||| ||| |||| |
|
|
| T |
77863 |
tttagtaggctttttctcttatattggctcttcaaaattgttgggaaataccccttcaatgttaacactaactgtttgt |
77785 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 21781472 - 21781509
Alignment:
| Q |
56 |
atccgtaattggataggaaaaaagactttggattctca |
93 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
21781472 |
atccgtaactggattggaaaaaagactttggattctca |
21781509 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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