View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3607_low_2 (Length: 601)
Name: NF3607_low_2
Description: NF3607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3607_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 510; Significance: 0; HSPs: 55)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 16 - 591
Target Start/End: Complemental strand, 27426189 - 27425614
Alignment:
| Q |
16 |
cattaagtgcgataaaccaaaaacgtagaagagctgcttgagtagttgaattcattctcattaaacaaaacatatttacaatttgccaatctaatggtca |
115 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27426189 |
cattaagtgcgataaaccaaaaacgtaaaagagctgcttgagtagttgaattcattctcattaaacaaaacatatttacaatttgctaatctaatggtca |
27426090 |
T |
|
| Q |
116 |
tttccttctcatcttttagaatttgatgagataactagaatacnnnnnnntatttctactaaactatgtcagtctgttttggtgtcagattcatagtcca |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
27426089 |
tttccttctcatcttttagaatttgatgagataactagaatacaaaaaaatatttctactaaactatgtcagtctgttttggtgtcagattcataggcca |
27425990 |
T |
|
| Q |
216 |
ttcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactca |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27425989 |
ttcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactca |
27425890 |
T |
|
| Q |
316 |
ataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtc |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27425889 |
ataagtcttgaaatgatggttggttcaagtatgatattgggatcacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtc |
27425790 |
T |
|
| Q |
416 |
cacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgataccagcaaaacgaaaacccattgttgtatgtgttaaaacttgagaatat |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27425789 |
cacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgataccagcaaaacgaaaacccattgttgtatgtgttaaaacttgagaatat |
27425690 |
T |
|
| Q |
516 |
ttagttttnnnnnnngacctgtaagcaagaagcaagtttttgaaattggaatggtttaggatgtgaatgatctgtg |
591 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27425689 |
tcagttttaaaaaaagacctgtaagcaagaagcaagtttttgaaattggaatggtttaggatgtgaatgatttgtg |
27425614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 170 - 512
Target Start/End: Complemental strand, 27420631 - 27420289
Alignment:
| Q |
170 |
tctactaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgagg |
269 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||||||| ||||| |||| ||| || ||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
27420631 |
tctactaaactatgtcagactcttttggtctcagattcatagcccattgaagcaagaagttatatgttgaaagacatcttccgtgcaaggaatggtgagg |
27420532 |
T |
|
| Q |
270 |
ccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgct |
369 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||| |||||||||||| ||||||| ||||||| |
|
|
| T |
27420531 |
ccacccatgggatgatcatatccaaactcttcctcaacttgactcagcaagccttgaaatgaaggttggctcaagtatgatacggggattaaataccgcg |
27420432 |
T |
|
| Q |
370 |
tttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgatacc |
469 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27420431 |
tctgtttctctccaacatatactgcaagatatccctttggcacgtccacagattttgaagctgatcggtttgcagaaaatgatgcctttctgatgatacc |
27420332 |
T |
|
| Q |
470 |
agcaaaacgaaaacccattgttgtatgtgttaaaacttgagaa |
512 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27420331 |
agggaaacgaaaacccattgttgtatgtgttaaaactttagaa |
27420289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 170 - 591
Target Start/End: Complemental strand, 27412887 - 27412474
Alignment:
| Q |
170 |
tctactaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgagg |
269 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||| || |||||||||||||||||| |
|
|
| T |
27412887 |
tctactaaactatgtcagtttcttttggtgtcagattcatagcccattcgagcgagatgttatatgttgaaagacatcttccgtgcaaggaatggtgagg |
27412788 |
T |
|
| Q |
270 |
ccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgct |
369 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
27412787 |
ccacccattggatgatcatatccaaactcttcttcagcttgactcaataagtcttgaaataatggttggttcaagtatgatattgggatcacaaacc--- |
27412691 |
T |
|
| Q |
370 |
tttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgatacc |
469 |
Q |
| |
|
|||||||||||||||| || |||| |||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27412690 |
---gtttctctccaacatacacggcaatatatccctttggcatgtcaacagcttttgaaactgctcggtttgcagaaaatgatgcccttctgatgatacc |
27412594 |
T |
|
| Q |
470 |
agcaaaacgaaaacccattgttgtatgtgttaaaacttgagaatatttagttttnnnnnnngacctgtaagcaagaagcaagtttttgaaattggaatgg |
569 |
Q |
| |
|
|| ||||||||||||||| |||||||||||| ||||| | | | ||| | ||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
27412593 |
agagaaacgaaaacccatttttgtatgtgttagaacttaaattcaaatggttgt--aggaagacttgtaagcaagaagcaagtttttgaaattaaaatgg |
27412496 |
T |
|
| Q |
570 |
tttaggatgtgaatgatctgtg |
591 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
27412495 |
tttaggatgtgaatgatttgtg |
27412474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 171 - 514
Target Start/End: Original strand, 27569967 - 27570310
Alignment:
| Q |
171 |
ctactaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggc |
270 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||||||| || |||| ||||||||| ||||||||||| | ||| |||||||||||||||||||||| |
|
|
| T |
27569967 |
ctactaaactatgtcagtctcttctggtgttagattcatatcccgttcatgcgagatgttatatgttgaaagatatcttcggtgcaaggaatggtgaggc |
27570066 |
T |
|
| Q |
271 |
cacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgctt |
370 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | |||||||||| ||||| ||||||||| | |
|
|
| T |
27570067 |
cacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaagtatgatacggggatcacataccgcgt |
27570166 |
T |
|
| Q |
371 |
ttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgatacca |
470 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||| |||||||||||||| |
|
|
| T |
27570167 |
ctgtttctctccaacatatactgcaagatatccctttggcacatccacagcttttgaagctgatcggtttccagaaaaagatgcccttctgatgatacca |
27570266 |
T |
|
| Q |
471 |
gcaaaacgaaaacccattgttgtatgtgttaaaacttgagaata |
514 |
Q |
| |
|
| ||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27570267 |
gggggacgaaaacccatttttgtatgtgttaacacttgagaata |
27570310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 591
Target Start/End: Original strand, 27565714 - 27566289
Alignment:
| Q |
18 |
ttaagtgcgataaaccaaaaacgtagaagagctgcttgagtagttgaattcattctcattaaacaaaacatatttacaatttgccaatctaatggtcatt |
117 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||| |||| ||||||||| || |||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
27565714 |
ttaagtgcaataaaccaaaaacatagaagagctgcttgaatagtcgaattcattgtcgttaaacaaaattgatatacaatttatcaatctaatggtcatt |
27565813 |
T |
|
| Q |
118 |
tccttctcatcttttagaatttgatgagataactagaatacnnnnnnntattt----ctactaaactatgtcagtctgttttggtgtcagattcatagtc |
213 |
Q |
| |
|
| || ||||||| | |||||||| |||| |||| ||| || | |||||||||||||||||||| |||||||| || ||||||||| |
|
|
| T |
27565814 |
tttttg-catcttt-acaatttgataagatgcctagtttacaaaaaaataaatatccctactaaactatgtcagtctaatttggtgttaggttcatagtc |
27565911 |
T |
|
| Q |
214 |
cattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgact |
313 |
Q |
| |
|
||||||||| ||| || |||||||| || ||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| | |
|
|
| T |
27565912 |
cattcaagcaagaagttatatgttggaagacatcttcgccacaaggaatggtgaggccacccattggatgatcatatccatgctcttcctcaacttgtat |
27566011 |
T |
|
| Q |
314 |
caataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacg |
413 |
Q |
| |
|
|| ||||||||||| |||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27566012 |
cagcaagtcttgaaacaatggttggttcaggtatgatatggggatcacaaatcgcttttgtttctctccaacatacactgcaagatatccctttggcacg |
27566111 |
T |
|
| Q |
414 |
tccacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgataccagcaaaacgaaaacccattgttgtatgtgttaaaacttgagaat |
513 |
Q |
| |
|
|||||| |||| ||| ||| ||||||| || |||||||||| || |||| |||| || |||||||||||||||| |||||| ||| ||||||||||| |
|
|
| T |
27566112 |
tccacaacttttgaaactgctcggtttccaacaaatgatgcccttttgataatactagggaaacgaaaacccattgctgtatgcgttcaaacttgagaaa |
27566211 |
T |
|
| Q |
514 |
atttagttttnnnnnnngacctgtaagcaagaagcaagttttt-gaaattggaatggtttaggatgtgaatgatctgtg |
591 |
Q |
| |
|
| || ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
27566212 |
aattggtttt-aaaaaagacttgtaagcaagaagcaagtttttggaaattggaatggtttaggatgtgaatgatttgtg |
27566289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 170 - 512
Target Start/End: Complemental strand, 27415845 - 27415505
Alignment:
| Q |
170 |
tctactaaactatgtcagtctgttttg-gtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgag |
268 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||||| || |||||||| ||||| || ||||||||||||||||| |
|
|
| T |
27415845 |
tctactaaactatgtcagtctcttttttgtgttagattcatattccgttcaagcgagatgttatgtgttgaaagacatcttctgtgcaaggaatggtgag |
27415746 |
T |
|
| Q |
269 |
gccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgc |
368 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||| | ||| |
|
|
| T |
27415745 |
gccacccatggaatgatcatatccaaactcttcctcagcttgactcaacaagtcttgaaacgatggttggttcaagtatgatatggggatcacaaatcgc |
27415646 |
T |
|
| Q |
369 |
ttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgatac |
468 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||| |||||| |||| ||| | |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
27415645 |
ttttgttt---tccaacatacactgcaagatatccctttggcacatccacaacttttgaaattactcggcttgcagaaaatgatgactttctgatgatac |
27415549 |
T |
|
| Q |
469 |
cagcaaaacgaaaacccattgttgtatgtgttaaaacttgagaa |
512 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27415548 |
tagggacacgaaaacccattgttgtatgtgttaaaacttgagaa |
27415505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 176 - 504
Target Start/End: Complemental strand, 27423439 - 27423111
Alignment:
| Q |
176 |
aaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccaccc |
275 |
Q |
| |
|
|||||| || ||||| ||||||||| ||||||||||||||||||| |||| || |||||||| || ||||| || |||||||||| ||||||||||||| |
|
|
| T |
27423439 |
aaactacgttagtctattttggtgtttgattcatagtccattcaagtgagaagttatatgttggaaaacatcttccgtgcaaggaacggtgaggccaccc |
27423340 |
T |
|
| Q |
276 |
atgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtt |
375 |
Q |
| |
|
|||||||||| || |||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||||| |||| |||| ||| | |||| |
|
|
| T |
27423339 |
atgggatgattgtaaccaaactcttcctcggcttgactcaacaattcttgaaatgaaggttggttcaagtatgatatgcggatcacatgccgtgtctgtt |
27423240 |
T |
|
| Q |
376 |
tctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgatcggtttgcagaaaatgatgcctttctgatgataccagcaaa |
475 |
Q |
| |
|
||| |||||||||||| |||||||||| |||||||| |||| ||||||| || || |||||||||||||||||| ||| ||||||| ||||||| || |
|
|
| T |
27423239 |
tctatccaacatatacagcaagatatctctttggcatgtccgcagcttttgatattgctcggtttgcagaaaatgaggcccttctgataataccagagaa |
27423140 |
T |
|
| Q |
476 |
acgaaaacccattgttgtatgtgttaaaa |
504 |
Q |
| |
|
||| | ||||||||||||||||||||||| |
|
|
| T |
27423139 |
acggatacccattgttgtatgtgttaaaa |
27423111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 205 - 512
Target Start/End: Original strand, 27563298 - 27563608
Alignment:
| Q |
205 |
ttcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctc |
304 |
Q |
| |
|
||||||| ||||||||||||| || ||||||||||| |||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
27563298 |
ttcatagctcattcaagcgagaagttatatgttgaaaggcatcttcagtgcaaggaattgtgaggccacccattggatgatcatatccaaactcttcttc |
27563397 |
T |
|
| Q |
305 |
aaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccc |
404 |
Q |
| |
|
|||||||| || |||||||| ||| ||||||||||||||||| ||||| ||| | ||||||||| |||||||| || ||||||||||| ||| |
|
|
| T |
27563398 |
ggcttgactcagcaaatcttgaaacaatgtttggttcaagtatgatacggggatcacaattctcttttgtttatctccaacgtacactgcaagatagccc |
27563497 |
T |
|
| Q |
405 |
tttggcacgtccacagctttcgaagctgatcggtttgcagaaa---atgatgcctttctgatgataccagcaaaacgaaaacccattgttgtatgtgtta |
501 |
Q |
| |
|
||||||||||||||| |||| | | |||||||| ||| || || |||||| | |||| |||||||||| |||||||||||||||| || ||||||| |
|
|
| T |
27563498 |
tttggcacgtccacaacttttgtaactgatcggcttgaagtaaacgatgatgaccttctaatgataccaggtaaacgaaaacccattgctgagtgtgtta |
27563597 |
T |
|
| Q |
502 |
aaacttgagaa |
512 |
Q |
| |
|
||||||||||| |
|
|
| T |
27563598 |
aaacttgagaa |
27563608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 197 - 407
Target Start/End: Original strand, 27468271 - 27468481
Alignment:
| Q |
197 |
gtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaac |
296 |
Q |
| |
|
|||| |||||||||||||||||||| ||| | |||||||| || ||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27468271 |
gtgtaagattcatagtccattcaaggaagaaattatatgttggaagacatcttccgtgcaaggaatggtgaggccacccatgggatgatcatatccaaat |
27468370 |
T |
|
| Q |
297 |
tcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaa |
396 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||| |||||||| |||||||||| |||| |||| ||||| |||||||||||||||| || |||| |
|
|
| T |
27468371 |
tcttcctcggattgactcaacaagtcttgaaatgaaggttggtttaagtatgatacagggactacaaaccgcaccagtttctctccaacatacaccgcaa |
27468470 |
T |
|
| Q |
397 |
gatatcccttt |
407 |
Q |
| |
|
||| |||||| |
|
|
| T |
27468471 |
catagcccttt |
27468481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 202 - 351
Target Start/End: Complemental strand, 27504113 - 27503964
Alignment:
| Q |
202 |
agattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc |
301 |
Q |
| |
|
||||||||||||||||||||| ||| || || ||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27504113 |
agattcatagtccattcaagcaagaagttatgtgttggaagacatcttcggtgcaaggaatggtgaggccacccattggatgatcatatccaaactcttc |
27504014 |
T |
|
| Q |
302 |
ctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
27504013 |
ctcggcttgactcaacaagtcttgaaatgaaggttggttcaagtatgata |
27503964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 202 - 351
Target Start/End: Original strand, 27475528 - 27475677
Alignment:
| Q |
202 |
agattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc |
301 |
Q |
| |
|
|||||||||| |||||||||| ||| || |||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27475528 |
agattcatagcccattcaagcaagaagttatatgttggaagacatcttcggagcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc |
27475627 |
T |
|
| Q |
302 |
ctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
27475628 |
ctcggcttgactcaacaagtcttgaaatgaaggttgattcaagtatgata |
27475677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 197 - 409
Target Start/End: Original strand, 27478827 - 27479039
Alignment:
| Q |
197 |
gtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaac |
296 |
Q |
| |
|
|||| ||| |||||| |||||||||| ||| || |||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27478827 |
gtgtaagaatcatagcccattcaagcaagaagttatatgttggaacacatcttcggagcaaggaatggtgaggccacccatgggatgatcatatccaaat |
27478926 |
T |
|
| Q |
297 |
tcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaa |
396 |
Q |
| |
|
||||| || |||| | || |||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |
|
|
| T |
27478927 |
tcttcttccgcttgatgtagcaattcttgaaacaatggttggttcaagtatgatattgggacaacaaaccgcttctgtttctctccaacatacactgcaa |
27479026 |
T |
|
| Q |
397 |
gatatccctttgg |
409 |
Q |
| |
|
||| |||||||| |
|
|
| T |
27479027 |
catagccctttgg |
27479039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 170 - 409
Target Start/End: Original strand, 27497239 - 27497478
Alignment:
| Q |
170 |
tctactaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgagg |
269 |
Q |
| |
|
|||||||||||| |||||||| ||| || | ||| |||| |||||||||||||| || || |||| || |||| || |||||||||||||||||| |
|
|
| T |
27497239 |
tctactaaactacgtcagtctctttccacgtgaaatttatagcccattcaagcgagaagttatgcgttggaagacattttcagtgcaaggaatggtgagg |
27497338 |
T |
|
| Q |
270 |
ccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgct |
369 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||| || | |||||| |||||||||| |||||||| || ||||| ||| |||||| |
|
|
| T |
27497339 |
ccacctgtgggatgatcatatccaaactcttcctcagcttgactcaacaaatattgaaacaatggttggtttaagtatgagatagggatcacaaaccgct |
27497438 |
T |
|
| Q |
370 |
tttgtttctctccaacatatactgcaagatatccctttgg |
409 |
Q |
| |
|
||||||| ||||||||||| ||||||| ||| |||||||| |
|
|
| T |
27497439 |
tttgtttatctccaacatacactgcaacatagccctttgg |
27497478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 197 - 407
Target Start/End: Complemental strand, 27515087 - 27514877
Alignment:
| Q |
197 |
gtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaac |
296 |
Q |
| |
|
|||| |||||||||||||||||||| ||| | ||||| || || ||||| || || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27515087 |
gtgtaagattcatagtccattcaaggaagaaattatatgctggaagacatcttctgtacaaggaatggtgaggccacccatgggatgatcatatccaaat |
27514988 |
T |
|
| Q |
297 |
tcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaa |
396 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||| ||||| ||||||||||||| |||| |||| ||||| |||||||||||||||| || |||| |
|
|
| T |
27514987 |
tcttcctcggattgactcaacaagtcttgaaatgaaggttgattcaagtatgatacagggactacaaaccgcaccagtttctctccaacatacaccgcaa |
27514888 |
T |
|
| Q |
397 |
gatatcccttt |
407 |
Q |
| |
|
||| |||||| |
|
|
| T |
27514887 |
catagcccttt |
27514877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 214 - 453
Target Start/End: Complemental strand, 27585867 - 27585628
Alignment:
| Q |
214 |
cattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgact |
313 |
Q |
| |
|
||||||||||| | || ||||||| || |||| || ||||||||||||||||| || ||||| ||||||||||||||||||||||| || |||||| |
|
|
| T |
27585867 |
cattcaagcgataagttatatgtttgaaggcatcttctgtgcaaggaatggtgagacctcccattggatgatcatatccaaactcttcttcggcttgact |
27585768 |
T |
|
| Q |
314 |
caataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacg |
413 |
Q |
| |
|
|| || |||||||| ||||||||||||||||||||| ||||| ||| | | ||||||||| || ||||| | ||||| |||||||||||||||||| |
|
|
| T |
27585767 |
catcaaatcttgaaacaatggttggttcaagtatgatacggggatcacaaatctcttttgtttatcaccaacgcacactgcgagatatccctttggcacg |
27585668 |
T |
|
| Q |
414 |
tccacagctttcgaagctgatcggtttgcagaaaatgatg |
453 |
Q |
| |
|
|||||| |||| ||| |||||||| ||| || |||||||| |
|
|
| T |
27585667 |
tccacaacttttgaaactgatcggcttgaagtaaatgatg |
27585628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 253 - 501
Target Start/End: Original strand, 27444794 - 27445033
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||||| || | |||||| |||| ||||||| ||||||||||||| |||| ||||||||||||| |
|
|
| T |
27444794 |
tgcaaggaattgtgagaccacccattggatggtcatatccgaattgttcctcggcttgattcaataattcttgaaatgatgattggctcaagtatgatat |
27444893 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgatcggtttgcagaaaatgat |
452 |
Q |
| |
|
|||||| ||| ||| ||| || ||||||||| |||||||||||||||||||||||||| ||||| |||| |||| || | |||||||| |
|
|
| T |
27444894 |
tgggatcacaaacctcttcatttcctctccaacgtatactgcaagatatccctttggcacatccacgccttttgaagatgtttggtttgca--------- |
27444984 |
T |
|
| Q |
453 |
gcctttctgatgataccagcaaaacgaaaacccattgttgtatgtgtta |
501 |
Q |
| |
|
||| ||||||||||||| | ||||||||||||||| |||||||||||| |
|
|
| T |
27444985 |
gcccttctgatgataccggttaaacgaaaacccattcttgtatgtgtta |
27445033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 197 - 409
Target Start/End: Complemental strand, 27506894 - 27506682
Alignment:
| Q |
197 |
gtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaac |
296 |
Q |
| |
|
|||||||||| || | ||||||||| ||| || || |||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27506894 |
gtgtcagatttatggctcattcaagcaagaagttatgtgttgaaagacatcttcagtgcaaggaatggtgagtccacccatgggatgatcatatccaaat |
27506795 |
T |
|
| Q |
297 |
tcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaa |
396 |
Q |
| |
|
||||| || |||| | || |||||||| |||||||||| ||||||||||||||||| ||| ||||| | ||||||||||| ||||||||||||| |
|
|
| T |
27506794 |
tcttcttccgcttgatgtagcaattcttgaaacaatggttggtttaagtatgatattgggatcacaaaccgcgtctgtttctctccgacatatactgcaa |
27506695 |
T |
|
| Q |
397 |
gatatccctttgg |
409 |
Q |
| |
|
||| |||||||| |
|
|
| T |
27506694 |
catagccctttgg |
27506682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 213 - 396
Target Start/End: Complemental strand, 27524704 - 27524521
Alignment:
| Q |
213 |
ccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgac |
312 |
Q |
| |
|
|||||||||| || || |||||||| || ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
27524704 |
ccattcaagcatgaagttatatgttggaagacatcttcggtgcacggaatggtgaggccacccattggatgatcatatccaaactcttcctcagcttgat |
27524605 |
T |
|
| Q |
313 |
tcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaa |
396 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| ||||||| || | || ||||| | |||||||||||||||| ||||||| |
|
|
| T |
27524604 |
tcaacaagtcttgaaatgaaggttggttcaaatatgatacaggaactatgaaccgcgtcagtttctctccaacatacactgcaa |
27524521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 252 - 409
Target Start/End: Original strand, 27485942 - 27486099
Alignment:
| Q |
252 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| | || |||||||| ||||||||||||||||||||| |
|
|
| T |
27485942 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggttcaagtatgata |
27486041 |
T |
|
| Q |
352 |
ttgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttgg |
409 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||| ||||||| ||| |||||||| |
|
|
| T |
27486042 |
ttgggacaacaaaccgcttctgtttctctccaacatacactgcaacatagccctttgg |
27486099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 202 - 407
Target Start/End: Complemental strand, 27509043 - 27508838
Alignment:
| Q |
202 |
agattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc |
301 |
Q |
| |
|
|||||||||||||||| |||| ||| || |||||||| || ||||| |||| ||| |||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
27509043 |
agattcatagtccattgaagcaagaagttatatgttggaacacatcttcggagcatggaatggtgaggccacccgttggatgatcatatccaaactcttc |
27508944 |
T |
|
| Q |
302 |
ctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatat |
401 |
Q |
| |
|
|||| ||| |||| |||||||||||||| ||||||||||| ||||| | || | ||| | ||| | |||||||||||||||| ||||||| ||| |
|
|
| T |
27508943 |
ctcagcctgattcaacaagtcttgaaatgaaggttggttcaaatatgacacaggaacgacaaaacgcgtcagtttctctccaacatacactgcaacatag |
27508844 |
T |
|
| Q |
402 |
cccttt |
407 |
Q |
| |
|
|||||| |
|
|
| T |
27508843 |
cccttt |
27508838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 257 - 407
Target Start/End: Complemental strand, 27490096 - 27489946
Alignment:
| Q |
257 |
aggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattggg |
356 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |||||||||||||||| ||| |||||||| | ||| |
|
|
| T |
27490096 |
aggaatggtgaggccacccattggatgatcatatccaaactcttcctcggcttgattcaacaaatcttgaaatgatggtttgtttaagtatgacacaggg |
27489997 |
T |
|
| Q |
357 |
attacataccgcttttgtttctctccaacatatactgcaagatatcccttt |
407 |
Q |
| |
|
| |||| |||| |||||||||||||||||||| ||| ||| ||| |||||| |
|
|
| T |
27489996 |
actacaaaccgtttttgtttctctccaacatacactacaacatagcccttt |
27489946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 273 - 409
Target Start/End: Complemental strand, 27527281 - 27527145
Alignment:
| Q |
273 |
cccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgctttt |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| || ||| |||| ||||||||||| |||| |||||||||||| ||| |||| || | |
|
|
| T |
27527281 |
cccatgggatgatcatatccaaactcttcctcagcttgactcagcaactctagaaacgatggttggtttaagtgtgatattgggatcacaaaccgtttct |
27527182 |
T |
|
| Q |
373 |
gtttctctccaacatatactgcaagatatccctttgg |
409 |
Q |
| |
|
|||| ||||||||||| || |||||||| |||||||| |
|
|
| T |
27527181 |
gtttatctccaacatacaccgcaagatagccctttgg |
27527145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 253 - 419
Target Start/End: Complemental strand, 27557629 - 27557463
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||| ||||| ||||| |||||||| |||||| ||||| |||| | ||||||| |||| ||| || |||||||||||||||||||| |||||||| || |
|
|
| T |
27557629 |
tgcatggaatagtgagaccacccattggatgaacatattcaaattgttcctcagcttgattcagcaattcttgaaatgatggttggtttaagtatgacat |
27557530 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccaca |
419 |
Q |
| |
|
|||||| ||| ||| ||| || ||||||||||||||| |||||||||||| ||||||| |||||| |
|
|
| T |
27557529 |
tgggatcacaaacctcttcatttcctctccaacatatacggcaagatatccccttggcacatccaca |
27557463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 434
Target Start/End: Complemental strand, 27487123 - 27486942
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| || || |||||||| |||||||||||| |||| | ||| ||| ||| |||| || |||||||| ||||||||||| |||||||||| |
|
|
| T |
27487123 |
tgcaaggaatagtaagaccacccattggatgatcatattcaaattgttcttcagcttggttcaacaattcttgaaacgatggttggtttaagtatgataa |
27487024 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
||||| ||| ||||||| ||||||||| || || ||||| |||||||||||||| |||||||||||||| |||| |||| |
|
|
| T |
27487023 |
agggatcacaaaccgcttcattttctctcctacgtacactgctagatatccctttggaacgtccacagcttttgaagatgat |
27486942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 27513776 - 27513957
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||||| || | | ||| ||| ||| |||| || ||||| || || | |||||||||||||||||| |
|
|
| T |
27513776 |
tgcaaggaatagtgagaccacccattggatgatcatattcatattgttcttcagcttggttcaacaattcttggaacgaggtttggttcaagtatgatat |
27513875 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
|||||| ||| ||||||| ||||||||| ||||| ||||| |||||||| ||||||||||| |||||||| |||| |||| |
|
|
| T |
27513876 |
tgggatcacaaaccgcttcattttctctcctacatacactgctagatatccttttggcacgtcaacagcttttgaagatgat |
27513957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 254 - 418
Target Start/End: Complemental strand, 27498554 - 27498390
Alignment:
| Q |
254 |
gcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatatt |
353 |
Q |
| |
|
||||||||| ||||| |||||||| |||||||||||| | || | |||||| ||| |||| |||||||| || ||||||||||||||||||||||| |
|
|
| T |
27498554 |
gcaaggaatagtgagaccacccattggatgatcatattcgaattgttcctcggcttggttcaacaagtcttggaacgatggttggttcaagtatgatata |
27498455 |
T |
|
| Q |
354 |
gggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccac |
418 |
Q |
| |
|
||||| ||| | || || || |||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
27498454 |
gggatcacaaaacgtttcatttcctctccaacatatactgctagatatccctttggcatgtccac |
27498390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 27431148 - 27431307
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| ||||| ||||| | ||||| ||||||||||| | |||||| |||| |||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
27431148 |
tgcaaggaattgtgagaccaccggttggatggtcatatccaaattgttcctcggcttgattcaacaattcttgaaatgacggttggttcaagtatgatat |
27431247 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|||||| ||| ||| ||| || || |||||||||||||||| ||||||||||||||| |
|
|
| T |
27431248 |
tgggatcacaaacctcttcatttcatccccaacatatactgcaatatatccctttggcac |
27431307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 27526112 - 27526293
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| ||||| |||||| | |||||||||||| |||| | ||||||| ||| ||||| || ||||| ||||| | ||||||||||||||||| |
|
|
| T |
27526112 |
tgcaaggaatagtgagaccacccgttggatgatcatattcaaattgttcctcagcttggctcaacaattcttggaatgaggtttggttcaagtatgatac |
27526211 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
|| || ||| ||||||| ||||||||||||||| ||||| |||||||||||||| || || ||| |||| |||| |||| |
|
|
| T |
27526212 |
aggaatcacaaaccgcttcattttctctccaacatacactgctagatatccctttggaacatcgacaccttttgaagatgat |
27526293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 243 - 412
Target Start/End: Complemental strand, 17970449 - 17970280
Alignment:
| Q |
243 |
acatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttca |
342 |
Q |
| |
|
||||| || ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| |||||| |||| ||||||||| | |||||||| |
|
|
| T |
17970449 |
acatcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttggttca |
17970350 |
T |
|
| Q |
343 |
agtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
||||||| | ||||| ||| ||||||| || ||||||||| || || |||||||||||||||||||| |
|
|
| T |
17970349 |
agtatgacgtagggatcacaaaccgcttcatttcctctccaacgtacaccgcaagatatccctttggcac |
17970280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 253 - 434
Target Start/End: Complemental strand, 27469600 - 27469419
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| || || |||||||| ||||| |||||| |||| | ||| ||| ||| ||||| | ||||| ||||||| ||| ||||| |||||||| |
|
|
| T |
27469600 |
tgcaaggaatagttagaccacccattggatgttcatattcaaattgttcttcagcttggctcaacagttcttgtaatgatgtttgcttcaaatatgatat |
27469501 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
||||| ||| ||||||| ||||||||| || || ||||| |||||||||||||| |||||||||||||| |||| |||| |
|
|
| T |
27469500 |
agggatcacaaaccgcttcattttctctcctacgtacactgctagatatccctttggaacgtccacagcttttgaagatgat |
27469419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 253 - 434
Target Start/End: Complemental strand, 27480041 - 27479860
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| |||| | ||||||| ||| |||| || | ||| ||||||| ||||||||||||||||| |
|
|
| T |
27480041 |
tgcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcagcttggttcaacaacttttggaatgatgtttggttcaagtatgatac |
27479942 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
|| || ||| | ||||| ||||||||| || |||||||| ||||| || ||||||||||||| | |||| |||| |||| |
|
|
| T |
27479941 |
aggaatcacaaaacgcttcattttctctcctacgtatactgctagatagccttttggcacgtccaaaccttttgaagatgat |
27479860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 27411447 - 27411554
Alignment:
| Q |
244 |
catcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaa |
343 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||| ||||||||||||||||| ||||| || |||| | | ||| |||||||| |||||||||||||| |
|
|
| T |
27411447 |
catcctcgctgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaacgatggttggttcaa |
27411546 |
T |
|
| Q |
344 |
gtatgata |
351 |
Q |
| |
|
|||||||| |
|
|
| T |
27411547 |
gtatgata |
27411554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 255 - 434
Target Start/End: Complemental strand, 27501455 - 27501276
Alignment:
| Q |
255 |
caaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattg |
354 |
Q |
| |
|
|||||||| ||||| |||||| | |||||||| ||| |||| | |||||| ||| |||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
27501455 |
caaggaatagtgagaccacccgttggatgatcgtattcaaattgttcctcggcttggttcaacaagtcttgaaacaatggttggtttaagtatgatattg |
27501356 |
T |
|
| Q |
355 |
ggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
|||| ||| |||| || || |||||||||||||||||| ||| |||||||||| || || ||| |||| |||| |||| |
|
|
| T |
27501355 |
ggatcacaaaccgtttcatttcctctccaacatatactgctagacatccctttggaacctcgacaccttttgaagatgat |
27501276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 409
Target Start/End: Original strand, 27424505 - 27424670
Alignment:
| Q |
244 |
catcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaa |
343 |
Q |
| |
|
|||||||| |||| |||||||| || |||||||| ||||||||||||||| | ||||| ||| ||||| | | || ||||||||||| ||||||||||| |
|
|
| T |
27424505 |
catcctcgctgcacggaatggtaagaccacccattggatgatcatatccatattcttcttcagattgatttagcaattcttgaaatgaaggttggttcaa |
27424604 |
T |
|
| Q |
344 |
gtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttgg |
409 |
Q |
| |
|
|||||||| ||| || ||| ||||| | || ||||||||||| ||||| ||||| || ||||| |
|
|
| T |
27424605 |
gtatgatactggaatcacaaaccgcctcatttgatctccaacatagactgcgagatagccttttgg |
27424670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 418
Target Start/End: Complemental strand, 27476827 - 27476662
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| || || |||||||| |||||||||||| |||| | ||||||| ||| |||| | ||||| ||||| | ||||||||||||||||| |
|
|
| T |
27476827 |
tgcaaggaatagttagaccacccattggatgatcatattcaaattgttcctcactttggctcagcagttcttggaatgaggtttggttcaagtatgatac |
27476728 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccac |
418 |
Q |
| |
|
|| || ||| ||||||| |||||| |||||||| ||||| |||||||||||||| |||||||| |
|
|
| T |
27476727 |
aggaatcacaaaccgcttcattttctcaccaacatacactgctagatatccctttggaacgtccac |
27476662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 27500338 - 27500519
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| |||| ||||||||| ||||| |||||||| |||| ||| ||| |||| |||| || ||||| ||||| |||||| ||||||||||| |
|
|
| T |
27500338 |
tgcaaggaatagtgatgccacccattggatggtcatatccgaactgttcttcagattggctcagcaattcttggaatgaactttggtttaagtatgatat |
27500437 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
||||| ||| | ||||| ||||||||| || || ||||| |||||||| ||||| |||||||||| ||| |||| |||| |
|
|
| T |
27500438 |
agggatcacaaatcgcttcattttctctcctacgtacactgctagatatccttttggtacgtccacagattttgaagatgat |
27500519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 255 - 417
Target Start/End: Original strand, 27502809 - 27502971
Alignment:
| Q |
255 |
caaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattg |
354 |
Q |
| |
|
|||||||| || || |||||||| ||||| ||||||||||| |||||| || ||| |||| |||||||||||||| | ||| ||||| ||||| |||| |
|
|
| T |
27502809 |
caaggaatagtaagaccacccattggatggtcatatccaaattcttccacagcttggctcagcaagtcttgaaatgaagtttgattcaaatatgacattg |
27502908 |
T |
|
| Q |
355 |
ggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtcca |
417 |
Q |
| |
|
| || ||| ||||||| |||||||| ||||| || ||||||||||| |||||||| |||| |
|
|
| T |
27502909 |
gaatcacaaaccgcttcatcttctctcctacataaacggcaagatatccttttggcacatcca |
27502971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 27505702 - 27505883
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||| | ||||||| ||| |||| || ||||| ||||| | ||||||||||||||||| |
|
|
| T |
27505702 |
tgcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgatac |
27505801 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
|| || ||| ||||||| ||||||||| || || ||||| ||||| ||||||||||| |||| | |||| |||| |||| |
|
|
| T |
27505802 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttggcacctccaaaccttttgaagatgat |
27505883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 27414304 - 27414463
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||| ||||| || || |||||||| ||||||||||||||||| ||||| || ||||| | | ||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
27414304 |
tgcacggaattgtaagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaatgagggttggttcaagtatgatac |
27414403 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|| || ||| |||| | ||| |||||||| || ||||||||||| || |||||||| |
|
|
| T |
27414404 |
aggaatcacaaaccgtctcattttatctccaacgtagactgcaagatagccttttggcac |
27414463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 255 - 418
Target Start/End: Complemental strand, 27554447 - 27554284
Alignment:
| Q |
255 |
caaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattg |
354 |
Q |
| |
|
|||||||| ||||| | |||| | ||||||||||||||||| | ||||||| |||| ||| || |||||||| ||||||||| | || | || |||| |
|
|
| T |
27554447 |
caaggaattgtgagactacccgttggatgatcatatccaaattgttcctcagcttgattcagcaattcttgaaacgatggttggcttaacaaagaaattg |
27554348 |
T |
|
| Q |
355 |
ggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccac |
418 |
Q |
| |
|
|| ||| ||||||| || ||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
27554347 |
atatcacaaaccgcttcatttcctctccaacatatactgcaaggtatccctttggcacatccac |
27554284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 27567404 - 27567297
Alignment:
| Q |
244 |
catcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaa |
343 |
Q |
| |
|
|||| ||| |||||||||| ||||| |||||||| ||||||||||| ||||| ||||| || |||| | | ||| |||||||| |||||||||||||| |
|
|
| T |
27567404 |
catcttcgctgcaaggaattgtgagaccacccattggatgatcataaccaaattcttcttctgtttgatttagtaattcttgaaacgatggttggttcaa |
27567305 |
T |
|
| Q |
344 |
gtatgata |
351 |
Q |
| |
|
|||||||| |
|
|
| T |
27567304 |
gtatgata |
27567297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 27523403 - 27523584
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||| || || |||||||| ||||| |||||| |||| | |||||| || ||||| || ||||| ||||| | ||||||||| ||||||| |
|
|
| T |
27523403 |
tgcaaggaatagttagaccacccattggatggtcatattcaaattgttcctcggcttcgctcaacaattcttggaatgaagtttggttcaaatatgatac |
27523502 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagctttcgaagctgat |
434 |
Q |
| |
|
|| || ||| ||||||| ||||||||| || || ||||| ||||| |||||||| |||||||||||||| |||| |||| |
|
|
| T |
27523503 |
aggaatcacaaaccgcttcattttctctcctacgtacactgctagatagccctttggaacgtccacagcttttgaagatgat |
27523584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 27571801 - 27571665
Alignment:
| Q |
215 |
attcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactc |
314 |
Q |
| |
|
|||||||||||| || | || | | ||| |||||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||| || ||||| | |
|
|
| T |
27571801 |
attcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccattggatgatcatatccaaattcttcttctgattgattt |
27571702 |
T |
|
| Q |
315 |
aataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
| ||| |||||||| ||||| ||| |||| ||||||| |
|
|
| T |
27571701 |
agtaattcttgaaacgatggctggctcaaatatgata |
27571665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 27559240 - 27559318
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatga |
331 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||||||||||||||||| || |||| || ||||| | ||||||||| |
|
|
| T |
27559240 |
tgcaaggaattgtgagaccacccattggatgatcatatccaaactcttcttctgattggcttaataactattgaaatga |
27559318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 27416005 - 27415940
Alignment:
| Q |
20 |
aagtgcgataaaccaaaaacgtagaagagctgcttgagtagttgaattcattctcattaaacaaaa |
85 |
Q |
| |
|
|||||| |||||||||||| ||||| |||||||||||||||| |||||| || ||| ||||||||| |
|
|
| T |
27416005 |
aagtgcaataaaccaaaaaagtagaggagctgcttgagtagtcgaattcgttttcactaaacaaaa |
27415940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 27460618 - 27460513
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| |||| | ||||||| ||| |||| || ||||| |||||| ||| ||||| |||||||| |
|
|
| T |
27460618 |
tgcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcactttggctcagcaattcttggaatgatttttgcttcaaatatgatat |
27460519 |
T |
|
| Q |
353 |
tgggat |
358 |
Q |
| |
|
||||| |
|
|
| T |
27460518 |
agggat |
27460513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 358
Target Start/End: Complemental strand, 27474031 - 27473927
Alignment:
| Q |
254 |
gcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatatt |
353 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| |||| | ||||||| ||| |||| || ||||| |||||| ||| ||||| |||||||| |
|
|
| T |
27474031 |
gcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcactttggctcagcaattcttggaatgatttttgcttcaaatatgatata |
27473932 |
T |
|
| Q |
354 |
gggat |
358 |
Q |
| |
|
||||| |
|
|
| T |
27473931 |
gggat |
27473927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 27569811 - 27569885
Alignment:
| Q |
18 |
ttaagtgcgataaaccaaaaacgtagaagagctgcttgagtagttgaattcattctcattaaacaaaacatattt |
92 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||| | ||||||||| ||||||||| ||||||||||||| |||||| |
|
|
| T |
27569811 |
ttaagtgcaataaaccaaaaacagagaggagatatttgagtagtcgaattcattgtcattaaacaaaatatattt |
27569885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 27419072 - 27419169
Alignment:
| Q |
254 |
gcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||||||||| || || |||||||| ||||||||||||||||| ||||| || ||||| | | ||| |||||||| ||||| ||| |||| ||||||| |
|
|
| T |
27419072 |
gcaaggaattgtaagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaacgatggctggctcaaatatgata |
27419169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 27563639 - 27563688
Alignment:
| Q |
537 |
taagcaagaagcaagtttttgaaattggaatggtttaggatgtgaatgat |
586 |
Q |
| |
|
||||||| || ||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
27563639 |
taagcaataaccaagtttttgaaatttgaatgctttaggatgtgaatgat |
27563688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 27495676 - 27495628
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc |
301 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| | ||||||||||||| |
|
|
| T |
27495676 |
tgcaaggaatggtgagaccacccattggatgattaaatccaaactcttc |
27495628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 27413045 - 27412970
Alignment:
| Q |
19 |
taagtgcgataaaccaaaaacgtagaagagctgcttgagtagttgaattcattctcatta-aacaaaacatattta |
93 |
Q |
| |
|
||||||| ||||||||||||| |||||||| | ||||| |||| |||||| || |||||| ||||||| ||||||| |
|
|
| T |
27413045 |
taagtgcaataaaccaaaaacatagaagagttacttgaatagtcgaattcgttttcattataacaaaaaatattta |
27412970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 27466961 - 27466909
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctca |
305 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||||| |||| | ||||||| |
|
|
| T |
27466961 |
tgcaaggaatagtgagaccacccattggatgatcatattcaaattgttcctca |
27466909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 504
Target Start/End: Original strand, 27500527 - 27500571
Alignment:
| Q |
460 |
tgatgataccagcaaaacgaaaacccattgttgtatgtgttaaaa |
504 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
27500527 |
tgatgatactaggtaaacgaaaacccattgttgtacgtgttaaaa |
27500571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Original strand, 27516798 - 27516838
Alignment:
| Q |
460 |
tgatgataccagcaaaacgaaaacccattgttgtatgtgtt |
500 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
27516798 |
tgatgatactaggtaaacgaaaacccattgttgtatgtgtt |
27516838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 120; Significance: 4e-61; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 202 - 409
Target Start/End: Original strand, 1756706 - 1756913
Alignment:
| Q |
202 |
agattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttc |
301 |
Q |
| |
|
|||||||||| |||||||||| ||| || |||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
1756706 |
agattcatagcccattcaagcaagaggtaatatgttggaaggcatcttcggtgcaaggaatggtgaggccacccatggggtgatcatatccaaattcttc |
1756805 |
T |
|
| Q |
302 |
ctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatat |
401 |
Q |
| |
|
||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
1756806 |
ttcagcttgactcaacaagtattgaaacgatggttggttcaagtatgatattgggatcacaaaccgcttctgtttctctccaacattcactgcaagatag |
1756905 |
T |
|
| Q |
402 |
ccctttgg |
409 |
Q |
| |
|
|||||||| |
|
|
| T |
1756906 |
ccctttgg |
1756913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 174 - 409
Target Start/End: Complemental strand, 1754906 - 1754672
Alignment:
| Q |
174 |
ctaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccac |
273 |
Q |
| |
|
||||||||||||| ||| ||||| | | | ||| |||| ||||| |||| ||| || |||| || || ||||| || |||||| ||||||||||||||| |
|
|
| T |
1754906 |
ctaaactatgtcactctcttttg-tatgaaatttatagcccatttaagctagaagttatattttcgaagacatcttctgtgcaaagaatggtgaggccac |
1754808 |
T |
|
| Q |
274 |
ccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttg |
373 |
Q |
| |
|
|||| |||||||||||||||||||||||| || ||||||||| ||| |||||| |||||||| |||||||||||||||||||| |||| ||| || || |
|
|
| T |
1754807 |
ccattggatgatcatatccaaactcttccgcagcttgactcaacaaggattgaaacgatggttgattcaagtatgatattgggatcacatgccgtttctg |
1754708 |
T |
|
| Q |
374 |
tttctctccaacatatactgcaagatatccctttgg |
409 |
Q |
| |
|
||||||||||| ||| ||||||| ||| |||||||| |
|
|
| T |
1754707 |
tttctctccaatatacactgcaacatagccctttgg |
1754672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 418
Target Start/End: Original strand, 1754243 - 1754406
Alignment:
| Q |
255 |
caaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattg |
354 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||||||| |||||| ||||||| ||| | | || | ||||||||| | ||||||||||||||||| | |
|
|
| T |
1754243 |
caaggaatagtgagaccacccatcggatgatcatattcaaactgttcctcagatttgtttagcaatttttgaaatgacgattggttcaagtatgatacgg |
1754342 |
T |
|
| Q |
355 |
ggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccac |
418 |
Q |
| |
|
|||| ||| ||||||| || |||||||||||||| || |||||||| |||||| ||||||| |
|
|
| T |
1754343 |
ggatcacaaaccgcttcatttcttctccaacatatacagctagatatccttttggctcgtccac |
1754406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 8e-38; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 252 - 424
Target Start/End: Original strand, 38024874 - 38025046
Alignment:
| Q |
252 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||||||||||| |||||||||||||| || |||||||||||||| |||||||| |||||||||||||| |||||| || | ||||||||||||||| | |
|
|
| T |
38024874 |
gtgcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttggttcaagtatgaca |
38024973 |
T |
|
| Q |
352 |
ttgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagcttt |
424 |
Q |
| |
|
| ||||| ||| ||||||| || |||||||||||||||||||||||| |||||||| || | ||||||||| |
|
|
| T |
38024974 |
tggggataacaaaccgcttcatttgctctccaacatatactgcaagatagccctttggtacattcacagcttt |
38025046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 252 - 424
Target Start/End: Original strand, 38031326 - 38031498
Alignment:
| Q |
252 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||||||||||| |||||||||||||| || |||||||||||||| |||||||| |||||||||||||| |||||| || | ||||||||||||||| | |
|
|
| T |
38031326 |
gtgcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttggttcaagtatgaca |
38031425 |
T |
|
| Q |
352 |
ttgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcacgtccacagcttt |
424 |
Q |
| |
|
| ||||| ||| ||||||| || |||||||||||||||||||||||| |||||||| || | ||||||||| |
|
|
| T |
38031426 |
tggggataacaaaccgcttcatttgctctccaacatatactgcaagatagccctttggtacattcacagcttt |
38031498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 174 - 412
Target Start/End: Complemental strand, 55085005 - 55084767
Alignment:
| Q |
174 |
ctaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccac |
273 |
Q |
| |
|
|||| |||||||| ||| ||| |||| ||||| ||||| |||| |||||||| || ||||| || ||||| || ||||||||||| |||||||||| |
|
|
| T |
55085005 |
ctaatctatgtcaatctctttcagtgtaagatttatagttcattgaagcgagaagtaatatgaaagaaaacatcttctgtgcaaggaattgtgaggccac |
55084906 |
T |
|
| Q |
274 |
ccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttg |
373 |
Q |
| |
|
|||| |||||||| |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| || || ||||| ||| ||||||| |
|
|
| T |
55084905 |
ccattggatgatcgtatccaaattcttcctccgcccgactcaacaagtcttgaaatgatggttggttcaagtaagacatagggatcacaaaccgcttcat |
55084806 |
T |
|
| Q |
374 |
tttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
||||||||||||||| ||||||||| | || |||||||| |
|
|
| T |
55084805 |
tttctctccaacatacactgcaagacacccttttggcac |
55084767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 243 - 412
Target Start/End: Complemental strand, 50910110 - 50909941
Alignment:
| Q |
243 |
acatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttca |
342 |
Q |
| |
|
||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||| | |||| |||| |||| ||||||||| | |||||||| |
|
|
| T |
50910110 |
acatcttctgtgcaaggaattgtgaggccacccattggatgatcatatccaaattcttcctccacttgattcaacaagttttgaaatgaagcttggttca |
50910011 |
T |
|
| Q |
343 |
agtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
||||||| || ||||| ||| ||||| || |||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
50910010 |
agtatgacatggggataacaaaccgcagcatttgctctccaacatacactgcaagataaccctttggcac |
50909941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 50904792 - 50904951
Alignment:
| Q |
253 |
tgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatat |
352 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| || || ||||| | ||||||| |||||||||||||| | |||||||||||| || || |
|
|
| T |
50904792 |
tgcaaggaatggtgaggccacccattggatgatcatatccgaattcatcctctgctcgactcaacaagtcttgaaatgaagtttggttcaagtaggacat |
50904891 |
T |
|
| Q |
353 |
tgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|||| ||| ||||||| || |||||||| || ||||||||||||||||||||||| |
|
|
| T |
50904892 |
atggatcacaaaccgcttcatttcttctccaacgtacactgcaagatatccctttggcac |
50904951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 412
Target Start/End: Original strand, 48840702 - 48840870
Alignment:
| Q |
243 |
acatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttca |
342 |
Q |
| |
|
||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| | || |||||| |||||||||||||| | |||||||| |
|
|
| T |
48840702 |
acatcttctgtgcaaggaattgtgaggccacccattggatgatcatatccaaattctttctccactt-actcaacaagtcttgaaatgaggcttggttca |
48840800 |
T |
|
| Q |
343 |
agtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|||||| || ||||||||| | ||||| | |||||| || || | ||||||||||||||||||||| |
|
|
| T |
48840801 |
agtatggcatggggattacaaatcgcttcatctcctctccgacgtacaatgcaagatatccctttggcac |
48840870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 50911868 - 50912028
Alignment:
| Q |
252 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||||||||||| || ||||||||||| || |||||||||||||| |||||||| ||||||||| |||| ||||||||| | ||||||||||||||| |
|
|
| T |
50911868 |
gtgcaaggaattgttaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaacaagttttgaaatgaagcttggttcaagtatgact |
50911967 |
T |
|
| Q |
352 |
ttgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
| ||||| ||| |||| || || |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
50911968 |
tggggatcacaaaccgtttcatcttgtctccaacatataccgcaagatagccctttggcac |
50912028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 249 - 412
Target Start/End: Complemental strand, 38044047 - 38043884
Alignment:
| Q |
249 |
tcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatg |
348 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| || | ||| |||||||||| |
|
|
| T |
38044047 |
tcggtgcaaggaattgtgaggccgcccattggatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaacgaagtttgattcaagtatg |
38043948 |
T |
|
| Q |
349 |
atattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
| || ||||| ||| ||||||| || |||||||| || ||||||||||| | ||||||||| |
|
|
| T |
38043947 |
acatagggatcacaaaccgcttcatttcctctccaaagtacactgcaagatagctctttggcac |
38043884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 412
Target Start/End: Original strand, 38028687 - 38028925
Alignment:
| Q |
174 |
ctaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccac |
273 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||| |||| ||||| ||| |||| || ||||| || || || || ||||||||||| |||||||| | |
|
|
| T |
38028687 |
ctaatctatgtcagtctcctttagtgtaagatttatagcccattgaagtgagaagtaatatgcaagaaaacgtcttctgtgcaaggaattgtgaggccgc |
38028786 |
T |
|
| Q |
274 |
ccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttg |
373 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||| ||||||||| | || ||||||||| | ||||||||||||||| | ||||| ||| | ||||| |
|
|
| T |
38028787 |
ccattggatggtcatatccaaattcttcctcggcttgactcaacaggttttgaaatgaagcttggttcaagtatgacgtggggataacaaatcgcttcat |
38028886 |
T |
|
| Q |
374 |
tttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|| ||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
38028887 |
ttgctctccaacgtacactgcaagatagccctttggcac |
38028925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 412
Target Start/End: Original strand, 38040002 - 38040240
Alignment:
| Q |
174 |
ctaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccac |
273 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||| |||| ||||| ||| |||| || ||||| || || || || ||||||||||| |||||||| | |
|
|
| T |
38040002 |
ctaatctatgtcagtctcctttagtgtaagatttatagcccattgaagtgagaagtaatatgcaagaaaacgtcttctgtgcaaggaattgtgaggccgc |
38040101 |
T |
|
| Q |
274 |
ccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttg |
373 |
Q |
| |
|
|||| ||||| |||||||| || |||||||| ||||||||| | || ||||||||| | ||||||||||||||| | ||||| ||| | ||||| |
|
|
| T |
38040102 |
ccattggatggtcatatccgaattcttcctcggcttgactcaacaggttttgaaatgaagcttggttcaagtatgacgtggggataacaaatcgcttcat |
38040201 |
T |
|
| Q |
374 |
tttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|| ||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
38040202 |
ttgctctccaacgtacactgcaagatagccctttggcac |
38040240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 412
Target Start/End: Original strand, 38033696 - 38033938
Alignment:
| Q |
174 |
ctaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccac |
273 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||| |||| ||||| |||||||| || ||||| || ||||| || ||||| ||||| |||| ||| | |
|
|
| T |
38033696 |
ctaatctatgtcagtctcctttagtgtaagatttatagcccattgaagcgagaagtaatatgcaagaaaacatcttctgtgcagggaattgtgatgccgc |
38033795 |
T |
|
| Q |
274 |
ccatg----ggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgct |
369 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||| ||||||||| |||| ||||||||| | ||||||||||||||| | ||||| ||| |||||| |
|
|
| T |
38033796 |
ccattaattggatggtcatatccaaattcttcctcggcttgactcaacaagttttgaaatgaagcttggttcaagtatgacgtggggataacaaaccgct |
38033895 |
T |
|
| Q |
370 |
tttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
| || |||||||| || ||||||||||| ||||||||||| |
|
|
| T |
38033896 |
tcatttgctctccaatgtacactgcaagatagccctttggcac |
38033938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 38036792 - 38036952
Alignment:
| Q |
252 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||||| || |||||||| ||||||||| || | ||||||||| | |||||||||||||| | |
|
|
| T |
38036792 |
gtgcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttgactcaacaaattttgaaatgaagcttggttcaagtatggca |
38036891 |
T |
|
| Q |
352 |
ttgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
| |||| ||| |||| || || ||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
38036892 |
tggggacaacaaaccgtttcatttgctctccaacgtacactgcaagatagccctttggcac |
38036952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 252 - 409
Target Start/End: Original strand, 21607295 - 21607452
Alignment:
| Q |
252 |
gtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgata |
351 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||||||| |||||||| |||||||||||||| |||||| || | | ||||||||||||| | |
|
|
| T |
21607295 |
gtgcaaggaaccgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagctcggttcaagtatgaca |
21607394 |
T |
|
| Q |
352 |
ttgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttgg |
409 |
Q |
| |
|
| ||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
21607395 |
tggggataacaaaccgcttcatttgctctccaacatataccgcaagatatccctttgg |
21607452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 174 - 412
Target Start/End: Original strand, 21604675 - 21604913
Alignment:
| Q |
174 |
ctaaactatgtcagtctgttttggtgtcagattcatagtccattcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccac |
273 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||| |||| ||||| ||| |||| || ||||| || || || || ||||||||||| |||||||| | |
|
|
| T |
21604675 |
ctaatctatgtcagtctcctttagtgtaagatttatagcccattgaagtgagaagtaatatgcaagaaaacgtcttctgtgcaaggaattgtgaggccgc |
21604774 |
T |
|
| Q |
274 |
ccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttcaagtatgatattgggattacataccgcttttg |
373 |
Q |
| |
|
|||| ||||| |||||||| || |||||||| ||||||||| | || ||||||||| | ||||||||||||||| | ||||| ||| | ||||| |
|
|
| T |
21604775 |
ccattggatggtcatatcctaattcttcctcgtcttgactcaacatgttttgaaatgaagcttggttcaagtatgacgtggggataacaaatcgcttcat |
21604874 |
T |
|
| Q |
374 |
tttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
|| |||||| || || ||||||||||| ||||||||||| |
|
|
| T |
21604875 |
ttgctctcctacttacactgcaagatagccctttggcac |
21604913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 21634693 - 21634608
Alignment:
| Q |
243 |
acatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaa |
328 |
Q |
| |
|
||||| |||||||||||||| |||| ||| ||||| |||||||||||||||| |||||||| |||||||| ||||||||||| |
|
|
| T |
21634693 |
acatcttcggtgcaaggaattgtgaagccgcccattcgatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaa |
21634608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 243 - 412
Target Start/End: Complemental strand, 3073719 - 3073550
Alignment:
| Q |
243 |
acatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactcaataagtcttgaaatgatggttggttca |
342 |
Q |
| |
|
||||| || ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| |||||| |||| ||||||||| | |||||||| |
|
|
| T |
3073719 |
acatcttctgtgcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttggttca |
3073620 |
T |
|
| Q |
343 |
agtatgatattgggattacataccgcttttgtttctctccaacatatactgcaagatatccctttggcac |
412 |
Q |
| |
|
||||||| | ||||| ||| ||||||| || ||||||||| || || |||||||||||||||||||| |
|
|
| T |
3073619 |
agtatgacgtagggatcacaaaccgcttcatttcctctccaacgtacaccgcaagatatccctttggcac |
3073550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University