View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3607_low_20 (Length: 240)
Name: NF3607_low_20
Description: NF3607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3607_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 27492491 - 27492692
Alignment:
| Q |
17 |
cagattctgctatgaaggaaccatttaccaaatataccgaatatctcaataaccttgtaatgtttcttatcttccattttaaattttctagctttttaat |
116 |
Q |
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| T |
27492491 |
cagattctgctatgaaggaaccatttaccaaatataccgaatatctcaataaccttgtaatgtttcttatcttccattttaaattttctagctttttaat |
27492590 |
T |
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| Q |
117 |
attcattgcatgaatgtgagttcattttggaaatcagtgaacaaattagctcatgggttattgttttgatgcctaaagatttgatttttattactatttt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
27492591 |
attcattgcatgaatgtgagttcattttggaaatcagtgaacaaattagctcatgggttattgttttgatgcctaaagatttgatttttattaatatttt |
27492690 |
T |
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| Q |
217 |
tt |
218 |
Q |
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| T |
27492691 |
tt |
27492692 |
T |
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