View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3608_low_12 (Length: 288)

Name: NF3608_low_12
Description: NF3608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3608_low_12
NF3608_low_12
[»] chr5 (46 HSPs)
chr5 (19-212)||(43240942-43241135)
chr5 (47-209)||(43235667-43235828)
chr5 (249-288)||(2888257-2888296)
chr5 (249-288)||(7208676-7208715)
chr5 (249-288)||(8741697-8741736)
chr5 (249-288)||(17157843-17157882)
chr5 (249-288)||(22255506-22255545)
chr5 (249-288)||(22973894-22973933)
chr5 (249-288)||(22981117-22981156)
chr5 (249-288)||(23116042-23116081)
chr5 (249-288)||(25669900-25669939)
chr5 (249-288)||(31705424-31705463)
chr5 (249-288)||(35511294-35511333)
chr5 (249-288)||(38528049-38528088)
chr5 (249-288)||(39573135-39573174)
chr5 (249-288)||(42343045-42343084)
chr5 (249-288)||(43254179-43254218)
chr5 (250-288)||(7693546-7693584)
chr5 (249-287)||(9200548-9200586)
chr5 (249-287)||(22019947-22019985)
chr5 (250-288)||(31786458-31786496)
chr5 (252-288)||(35504692-35504728)
chr5 (249-288)||(15724812-15724851)
chr5 (249-288)||(15992352-15992391)
chr5 (249-288)||(24886411-24886450)
chr5 (249-288)||(25889694-25889733)
chr5 (249-288)||(30969136-30969175)
chr5 (249-288)||(33908556-33908595)
chr5 (249-288)||(35826298-35826337)
chr5 (249-288)||(35934220-35934259)
chr5 (249-283)||(8437289-8437323)
chr5 (249-287)||(25500739-25500777)
chr5 (249-282)||(5830216-5830249)
chr5 (249-286)||(5837879-5837916)
chr5 (251-288)||(12910681-12910718)
chr5 (249-286)||(19120183-19120220)
chr5 (249-282)||(26269133-26269166)
chr5 (252-288)||(699477-699513)
chr5 (249-288)||(8467050-8467089)
chr5 (249-288)||(27330628-27330667)
chr5 (249-288)||(32563464-32563503)
chr5 (249-288)||(36867086-36867125)
chr5 (249-288)||(40133709-40133748)
chr5 (249-287)||(43308473-43308511)
chr5 (249-286)||(36860748-36860785)
chr5 (135-186)||(43230311-43230363)
[»] scaffold0002 (2 HSPs)
scaffold0002 (249-288)||(408251-408290)
scaffold0002 (249-288)||(452-491)
[»] chr8 (30 HSPs)
chr8 (249-288)||(466155-466194)
chr8 (249-288)||(16223186-16223225)
chr8 (249-288)||(34895285-34895324)
chr8 (249-288)||(34951885-34951924)
chr8 (249-288)||(35859257-35859296)
chr8 (249-287)||(7890786-7890824)
chr8 (249-286)||(11727347-11727384)
chr8 (249-288)||(1149460-1149499)
chr8 (249-288)||(5299774-5299813)
chr8 (249-288)||(6098341-6098380)
chr8 (249-288)||(8803644-8803683)
chr8 (249-288)||(12587905-12587944)
chr8 (249-284)||(16446707-16446742)
chr8 (249-288)||(23854259-23854298)
chr8 (249-288)||(35459539-35459578)
chr8 (249-288)||(37970347-37970386)
chr8 (249-288)||(43643423-43643462)
chr8 (249-288)||(44869820-44869859)
chr8 (250-288)||(24823222-24823260)
chr8 (249-287)||(31933715-31933753)
chr8 (249-286)||(33198125-33198162)
chr8 (249-280)||(1149756-1149787)
chr8 (249-288)||(1205250-1205289)
chr8 (249-288)||(1953816-1953855)
chr8 (249-288)||(27082666-27082705)
chr8 (249-288)||(38644301-38644340)
chr8 (249-288)||(41362745-41362784)
chr8 (249-288)||(43025997-43026036)
chr8 (249-287)||(9864471-9864509)
chr8 (249-286)||(18259402-18259439)
[»] chr7 (34 HSPs)
chr7 (249-288)||(8861584-8861623)
chr7 (249-288)||(17842407-17842446)
chr7 (249-288)||(18797626-18797665)
chr7 (249-288)||(24212041-24212080)
chr7 (249-288)||(25691367-25691406)
chr7 (249-288)||(37110173-37110212)
chr7 (249-288)||(38258878-38258917)
chr7 (249-286)||(6546818-6546855)
chr7 (249-286)||(15612584-15612621)
chr7 (249-286)||(30055826-30055863)
chr7 (249-285)||(22687530-22687566)
chr7 (249-288)||(9355649-9355688)
chr7 (249-288)||(10359037-10359076)
chr7 (249-288)||(11071502-11071541)
chr7 (249-288)||(23111491-23111530)
chr7 (249-288)||(26587915-26587954)
chr7 (249-288)||(29173821-29173860)
chr7 (249-286)||(26980605-26980642)
chr7 (251-288)||(44411363-44411400)
chr7 (249-281)||(12166042-12166074)
chr7 (249-288)||(7335092-7335131)
chr7 (249-288)||(31520564-31520603)
chr7 (249-288)||(31578887-31578926)
chr7 (249-288)||(32432751-32432790)
chr7 (249-288)||(32820876-32820915)
chr7 (249-288)||(34362001-34362040)
chr7 (249-284)||(35353407-35353442)
chr7 (249-288)||(37347320-37347359)
chr7 (249-288)||(37703321-37703360)
chr7 (249-288)||(37704481-37704520)
chr7 (249-288)||(43925394-43925433)
chr7 (249-288)||(46480952-46480991)
chr7 (249-282)||(41764907-41764940)
chr7 (256-288)||(21991933-21991965)
[»] chr6 (13 HSPs)
chr6 (249-288)||(1946159-1946198)
chr6 (249-288)||(6091003-6091042)
chr6 (249-287)||(5627716-5627754)
chr6 (249-288)||(3879760-3879799)
chr6 (249-288)||(33892833-33892872)
chr6 (249-283)||(20768406-20768440)
chr6 (249-288)||(4318643-4318682)
chr6 (249-288)||(7054593-7054632)
chr6 (249-287)||(21016940-21016978)
chr6 (249-286)||(29182485-29182522)
chr6 (251-288)||(33724080-33724117)
chr6 (256-288)||(6089227-6089259)
chr6 (256-288)||(8513552-8513584)
[»] chr4 (40 HSPs)
chr4 (249-288)||(1815625-1815664)
chr4 (249-288)||(7703833-7703872)
chr4 (249-288)||(32912427-32912466)
chr4 (249-288)||(33341722-33341761)
chr4 (249-288)||(34361339-34361378)
chr4 (249-288)||(37775982-37776021)
chr4 (249-288)||(50765044-50765083)
chr4 (249-286)||(19089303-19089340)
chr4 (249-286)||(37663591-37663628)
chr4 (249-286)||(47254064-47254101)
chr4 (252-288)||(3042946-3042982)
chr4 (249-288)||(879396-879435)
chr4 (249-288)||(4598306-4598345)
chr4 (249-288)||(6864359-6864398)
chr4 (249-288)||(7152052-7152091)
chr4 (249-288)||(23761395-23761434)
chr4 (249-288)||(25184437-25184476)
chr4 (249-284)||(26896412-26896447)
chr4 (249-288)||(30002489-30002528)
chr4 (253-288)||(34947943-34947978)
chr4 (249-288)||(35020879-35020918)
chr4 (249-288)||(35025414-35025453)
chr4 (249-288)||(39400332-39400371)
chr4 (249-288)||(46883962-46884001)
chr4 (249-288)||(50697566-50697605)
chr4 (249-288)||(55240953-55240992)
chr4 (249-288)||(55477739-55477778)
chr4 (249-287)||(46888007-46888045)
chr4 (251-288)||(37288054-37288091)
chr4 (249-288)||(17168037-17168076)
chr4 (249-288)||(19440496-19440535)
chr4 (249-288)||(23431879-23431918)
chr4 (249-288)||(29584048-29584087)
chr4 (249-288)||(32579770-32579809)
chr4 (253-288)||(32592412-32592447)
chr4 (249-284)||(33816368-33816403)
chr4 (249-288)||(36493537-36493576)
chr4 (249-288)||(49376291-49376330)
chr4 (250-288)||(42200056-42200094)
chr4 (260-288)||(27396949-27396977)
[»] chr3 (40 HSPs)
chr3 (249-288)||(3362570-3362609)
chr3 (249-288)||(4015774-4015813)
chr3 (249-288)||(11357203-11357242)
chr3 (249-288)||(20373085-20373124)
chr3 (249-288)||(21009623-21009662)
chr3 (249-288)||(24707937-24707976)
chr3 (249-288)||(39282967-39283006)
chr3 (249-288)||(44186339-44186378)
chr3 (249-288)||(47481838-47481877)
chr3 (249-288)||(54506123-54506162)
chr3 (249-287)||(38592013-38592051)
chr3 (249-286)||(7327306-7327343)
chr3 (249-286)||(26941084-26941121)
chr3 (249-286)||(42505899-42505936)
chr3 (249-286)||(44891812-44891849)
chr3 (252-288)||(21193925-21193961)
chr3 (249-285)||(33698468-33698504)
chr3 (252-288)||(40552081-40552117)
chr3 (249-288)||(1090008-1090047)
chr3 (249-288)||(14586502-14586541)
chr3 (249-288)||(22445887-22445926)
chr3 (249-288)||(22622540-22622579)
chr3 (249-288)||(29099661-29099700)
chr3 (249-288)||(36012454-36012493)
chr3 (249-288)||(37158023-37158062)
chr3 (249-288)||(37203383-37203422)
chr3 (249-288)||(46297584-46297623)
chr3 (249-288)||(48355256-48355295)
chr3 (249-288)||(50475133-50475172)
chr3 (249-288)||(52040744-52040783)
chr3 (249-288)||(53228974-53229013)
chr3 (248-284)||(11356984-11357020)
chr3 (249-288)||(2008254-2008293)
chr3 (249-288)||(4761470-4761509)
chr3 (249-288)||(33378607-33378646)
chr3 (249-284)||(43975718-43975753)
chr3 (249-287)||(34133250-34133288)
chr3 (249-286)||(40936288-40936325)
chr3 (249-277)||(32373785-32373813)
chr3 (249-281)||(46994490-46994522)
[»] chr2 (30 HSPs)
chr2 (249-288)||(7006778-7006817)
chr2 (249-288)||(11366220-11366259)
chr2 (249-288)||(18494121-18494160)
chr2 (249-288)||(26357901-26357940)
chr2 (249-288)||(33660217-33660256)
chr2 (249-288)||(35959216-35959255)
chr2 (249-288)||(43648085-43648124)
chr2 (249-287)||(19500756-19500794)
chr2 (249-287)||(27349789-27349827)
chr2 (249-286)||(19424484-19424521)
chr2 (249-288)||(4763955-4763994)
chr2 (249-288)||(5881853-5881892)
chr2 (249-288)||(33709072-33709111)
chr2 (249-288)||(41961164-41961203)
chr2 (249-288)||(44913991-44914030)
chr2 (249-287)||(31862176-31862214)
chr2 (249-286)||(13711783-13711820)
chr2 (251-288)||(29241985-29242022)
chr2 (252-288)||(2325218-2325254)
chr2 (252-288)||(33550823-33550859)
chr2 (249-288)||(4167246-4167285)
chr2 (249-288)||(41051140-41051179)
chr2 (249-288)||(43770688-43770727)
chr2 (254-288)||(17053971-17054005)
chr2 (254-288)||(17071612-17071646)
chr2 (249-286)||(31570576-31570613)
chr2 (249-282)||(37906034-37906067)
chr2 (255-288)||(39167209-39167242)
chr2 (249-277)||(4478689-4478717)
chr2 (252-288)||(33902341-33902377)
[»] chr1 (41 HSPs)
chr1 (249-288)||(1359752-1359791)
chr1 (249-288)||(1547591-1547630)
chr1 (249-288)||(2960068-2960107)
chr1 (249-288)||(3309473-3309512)
chr1 (249-288)||(10923047-10923086)
chr1 (249-288)||(11742185-11742224)
chr1 (249-288)||(16415966-16416005)
chr1 (249-288)||(19899585-19899624)
chr1 (249-288)||(21289920-21289959)
chr1 (249-288)||(23999668-23999707)
chr1 (249-288)||(27763127-27763166)
chr1 (249-288)||(32216375-32216414)
chr1 (249-288)||(34012199-34012238)
chr1 (249-288)||(37451605-37451644)
chr1 (249-288)||(46931730-46931769)
chr1 (249-288)||(48353862-48353901)
chr1 (249-287)||(9902872-9902910)
chr1 (251-288)||(32267356-32267393)
chr1 (249-286)||(51129179-51129216)
chr1 (249-288)||(4330601-4330640)
chr1 (249-288)||(15752349-15752388)
chr1 (249-288)||(27563722-27563761)
chr1 (249-288)||(28564600-28564639)
chr1 (249-288)||(39393704-39393743)
chr1 (249-288)||(47279509-47279548)
chr1 (249-287)||(38823534-38823572)
chr1 (249-286)||(7078882-7078919)
chr1 (249-282)||(8222447-8222480)
chr1 (249-282)||(25160952-25160985)
chr1 (252-288)||(30254746-30254782)
chr1 (249-288)||(238330-238369)
chr1 (249-288)||(3535243-3535282)
chr1 (249-284)||(15168416-15168451)
chr1 (249-288)||(22171031-22171070)
chr1 (249-288)||(27227302-27227341)
chr1 (249-288)||(27532799-27532837)
chr1 (249-288)||(28769973-28770012)
chr1 (249-288)||(42721356-42721395)
chr1 (251-288)||(10181824-10181861)
chr1 (249-282)||(30326775-30326808)
chr1 (256-288)||(18422971-18423003)
[»] scaffold0291 (1 HSPs)
scaffold0291 (249-286)||(8211-8248)
[»] scaffold0061 (1 HSPs)
scaffold0061 (249-288)||(44280-44319)
[»] scaffold0017 (1 HSPs)
scaffold0017 (249-288)||(154468-154507)
[»] scaffold0008 (1 HSPs)
scaffold0008 (255-287)||(267606-267638)
[»] scaffold0318 (1 HSPs)
scaffold0318 (249-288)||(12233-12271)


Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 43240942 - 43241135
Alignment:
Q  19 caatggacatcgtggtctttgtaacttagtatatcgatggttgaatatgtagagtgttttactttacatttgaataattttttcttgtagattgtaagtg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43240942 caatggacatcgtggtctttgtaacttagtatatcgatggttgaatatgtagagtgttttactttacatttgaataatttcttcttgtagattgtaagtg 43241041  T
Q  119 caaagtgtttgatatatgaagcaaattatgaaataatgaaaaatggaaattcctagcgcaagggtttggcatctaaatcaaattatgaaagcac 212  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43241042 caaagtgtttgatatatgaagcaaattacgaaataatgaaaaatggaaattcctagcgcaagggtttggcatctaaatcaaattatgaaagcac 43241135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 43235667 - 43235828
Alignment:
Q  47 gtatatcgatggttgaatatgtagagtgttttactttacatttgaataattttttcttgtagattgtaagtgcaaagtgtttgatatatgaagcaaatta 146  Q
    ||||||| ||||||| |||||||| || ||||||||||||||||||| |||| |||||| ||| ||||||||| || | ||| |||| ||||||||||||    
T  43235667 gtatatcaatggttggatatgtagggtattttactttacatttgaattatttcttcttgcagaatgtaagtgc-aacttttttatatctgaagcaaatta 43235765  T
Q  147 tgaaataatgaaaaatggaaattcctagcgcaagggtttggcatctaaatcaaattatgaaag 209  Q
     ||||||| ||||||||||||||| |||   ||  ||||| ||||||||||||||||||||||    
T  43235766 ggaaataaagaaaaatggaaattcttagtttaaatgtttgacatctaaatcaaattatgaaag 43235828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 2888296 - 2888257
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2888296 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 2888257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 7208715 - 7208676
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7208715 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 7208676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 8741736 - 8741697
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8741736 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 8741697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 17157882 - 17157843
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17157882 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 17157843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 22255506 - 22255545
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22255506 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 22255545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 22973933 - 22973894
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22973933 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 22973894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 22981117 - 22981156
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22981117 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 22981156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 23116081 - 23116042
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23116081 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 23116042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 25669900 - 25669939
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25669900 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 25669939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 31705463 - 31705424
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31705463 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 31705424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 35511333 - 35511294
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35511333 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 35511294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 38528088 - 38528049
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38528088 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 38528049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 39573135 - 39573174
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39573135 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 39573174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 42343045 - 42343084
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42343045 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 42343084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 43254179 - 43254218
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43254179 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 43254218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 7693546 - 7693584
Alignment:
Q  250 tcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7693546 tcattaatcagtaatcaacaatttaaaaatgaatcaaac 7693584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 9200548 - 9200586
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9200548 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 9200586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 22019947 - 22019985
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22019947 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 22019985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 31786496 - 31786458
Alignment:
Q  250 tcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31786496 tcattaatcagtaatcaacaatttaaaaatgaatcaaac 31786458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 35504692 - 35504728
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  35504692 attaatcagtaatcaacaatttaaaaatgaatcaaac 35504728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 15724812 - 15724851
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15724812 atcattaatcaataatcaacaatttaaaaatgaatcaaac 15724851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 15992391 - 15992352
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  15992391 atcattaatcagtaattaacaatttaaaaatgaatcaaac 15992352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 24886411 - 24886450
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  24886411 atcattaatcagaaatcaacaatttaaaaatgaatcaaac 24886450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 25889694 - 25889733
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  25889694 atcattaatcagtaatcaacaatttaaaaatgaattaaac 25889733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 30969175 - 30969136
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  30969175 atcattaatcagtaatccacaatttaaaaatgaatcaaac 30969136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 33908556 - 33908595
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  33908556 atcattaatcagcaatcaacaatttaaaaatgaatcaaac 33908595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 35826337 - 35826298
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  35826337 atcattaatcaataatcaacaatttaaaaatgaatcaaac 35826298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 35934220 - 35934259
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  35934220 atcattaatcagtaatcaacaatttaaaaatgattcaaac 35934259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 8437289 - 8437323
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaat 283  Q
    |||||||||||||||||||||||||||||||||||    
T  8437289 atcattaatcagtaatcaacaatttaaaaatgaat 8437323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 25500777 - 25500739
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  25500777 atcattaatcagtaattaacaatttaaaaatgaatcaaa 25500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 5830216 - 5830249
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    ||||||||||||||||||||||||||||||||||    
T  5830216 atcattaatcagtaatcaacaatttaaaaatgaa 5830249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 5837879 - 5837916
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5837879 atcattaatcaataatcaacaatttaaaaatgaatcaa 5837916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 12910681 - 12910718
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12910681 cattaatcagcaatcaacaatttaaaaatgaatcaaac 12910718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 19120183 - 19120220
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19120183 atcattaatcagtgatcaacaatttaaaaatgaatcaa 19120220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 26269133 - 26269166
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    ||||||||||||||||||||||||||||||||||    
T  26269133 atcattaatcagtaatcaacaatttaaaaatgaa 26269166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 699477 - 699513
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||| |||||||||||||||||||||||    
T  699477 attaatcagtaattaacaatttaaaaatgaatcaaac 699513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 8467050 - 8467089
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  8467050 atcattaattagtaatcaacagtttaaaaatgaatcaaac 8467089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 27330628 - 27330667
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  27330628 atcattaatcagtaatgaacgatttaaaaatgaatcaaac 27330667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 32563464 - 32563503
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  32563464 atcattaatcagcaattaacaatttaaaaatgaatcaaac 32563503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 36867086 - 36867125
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  36867086 atcatgaatcagtaatcaacaatttaaaaatgaattaaac 36867125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 40133709 - 40133748
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  40133709 atcatgaatcagtaatcaacaatttaaaaatgaattaaac 40133748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 43308511 - 43308473
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  43308511 atcattaatcagaaatcaacaatttaaaaacgaatcaaa 43308473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 36860748 - 36860785
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  36860748 atcatgaattagtaatcaacaatttaaaaatgaatcaa 36860785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 43230311 - 43230363
Alignment:
Q  135 tgaagcaaattatgaaataatgaaaa-atggaaattcctagcgcaagggtttg 186  Q
    |||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||    
T  43230311 tgaagcaaattacgaaataaagaaaaaatggaaattcctagtgcaagtgtttg 43230363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 408290 - 408251
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  408290 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 408251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 452 - 491
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  452 atcatgaatcagtaatcaacaatttaaaaatgaatcaaac 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 466155 - 466194
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  466155 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 466194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 16223186 - 16223225
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16223186 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 16223225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 34895285 - 34895324
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34895285 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 34895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 34951924 - 34951885
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34951924 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 34951885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 35859257 - 35859296
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35859257 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 35859296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 7890824 - 7890786
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7890824 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 7890786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 11727347 - 11727384
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11727347 atcattaatcagtaatcaacaatttaaaaatgaatcaa 11727384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 1149499 - 1149460
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  1149499 atcattaatcggtaatcaacaatttaaaaatgaatcaaac 1149460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 5299813 - 5299774
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  5299813 atcattaatcagtaatcaacaatttaaaaatgaattaaac 5299774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 6098380 - 6098341
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  6098380 atcattaattagtaatcaacaatttaaaaatgaatcaaac 6098341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 8803683 - 8803644
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8803683 atcattaatcagtaatgaacaatttaaaaatgaatcaaac 8803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 12587905 - 12587944
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  12587905 atcattaatcagtaattaacaatttaaaaatgaatcaaac 12587944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 16446742 - 16446707
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    ||||||||||||||||||||||||||||||||||||    
T  16446742 atcattaatcagtaatcaacaatttaaaaatgaatc 16446707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 23854298 - 23854259
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  23854298 atcattaatcagaaatcaacaatttaaaaatgaatcaaac 23854259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 35459578 - 35459539
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  35459578 atcattaatcagaaatcaacaatttaaaaatgaatcaaac 35459539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 37970386 - 37970347
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  37970386 atcattaatcagaaatcaacaatttaaaaatgaatcaaac 37970347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 43643462 - 43643423
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  43643462 atcattaatcagtaatcgacaatttaaaaatgaatcaaac 43643423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 44869820 - 44869859
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  44869820 atcattaatcagtaaccaacaatttaaaaatgaatcaaac 44869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 24823260 - 24823222
Alignment:
Q  250 tcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  24823260 tcattaatcagtaatcaacaatttaaaaataaatcaaac 24823222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 31933753 - 31933715
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31933753 atcattaatcagtaatcaacgatttaaaaatgaatcaaa 31933715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 33198125 - 33198162
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  33198125 atcattaatcaataatcaacaatttaaaaatgaatcaa 33198162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 280
Target Start/End: Complemental strand, 1149787 - 1149756
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatg 280  Q
    ||||||||||||||||||||||||||||||||    
T  1149787 atcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 1205250 - 1205289
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  1205250 atcattaatcactaatcagcaatttaaaaatgaatcaaac 1205289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 1953855 - 1953816
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  1953855 atcattaatcaataatcaacaattttaaaatgaatcaaac 1953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 27082705 - 27082666
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  27082705 atcattaatcaataatcaacaatttaaaaatgaattaaac 27082666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 38644301 - 38644340
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  38644301 atcattaatcagtaatcaaaaatttaaaaataaatcaaac 38644340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 41362745 - 41362784
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  41362745 atcattaaccagtaatcaacaatttaaaaatgaattaaac 41362784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 43025997 - 43026036
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  43025997 atcatgaatcagtgatcaacaatttaaaaatgaatcaaac 43026036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 9864471 - 9864509
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  9864471 atcatgaatcggtaatcaacaatttaaaaatgaatcaaa 9864509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 18259402 - 18259439
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  18259402 atcagtaatgagtaatcaacaatttaaaaatgaatcaa 18259439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 8861584 - 8861623
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8861584 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 8861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 17842446 - 17842407
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17842446 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 17842407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 18797626 - 18797665
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18797626 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 18797665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 24212041 - 24212080
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24212041 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 24212080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 25691406 - 25691367
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25691406 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 25691367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37110173 - 37110212
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37110173 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 37110212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 38258878 - 38258917
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38258878 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 38258917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 6546818 - 6546855
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6546818 atcattaatcagtaatcaacaatttaaaaatgaatcaa 6546855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 15612621 - 15612584
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15612621 atcattaatcagtaatcaacaatttaaaaatgaatcaa 15612584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 30055826 - 30055863
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30055826 atcattaatcagtaatcaacaatttaaaaatgaatcaa 30055863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 22687530 - 22687566
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatca 285  Q
    |||||||||||||||||||||||||||||||||||||    
T  22687530 atcattaatcagtaatcaacaatttaaaaatgaatca 22687566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 9355688 - 9355649
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  9355688 atcattaatcaataatcaacaatttaaaaatgaatcaaac 9355649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 10359076 - 10359037
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  10359076 atcattaatcaataatcaacaatttaaaaatgaatcaaac 10359037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 11071502 - 11071541
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  11071502 atcattaatcattaatcaacaatttaaaaatgaatcaaac 11071541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 23111491 - 23111530
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23111491 atcataaatcagtaatcaacaatttaaaaatgaatcaaac 23111530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 26587954 - 26587915
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  26587954 atcattaatcagtaatcaacaatttaaaaataaatcaaac 26587915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 29173821 - 29173860
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  29173821 atcatgaatcagtaatcaacaatttaaaaatgaatcaaac 29173860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 26980605 - 26980642
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26980605 atcattaatcggtaatcaacaatttaaaaatgaatcaa 26980642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 44411400 - 44411363
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44411400 cattaatcagtaatcaacaatttaaaaatgaatgaaac 44411363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 12166042 - 12166074
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatga 281  Q
    |||||||||||||||||||||||||||||||||    
T  12166042 atcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 7335092 - 7335131
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  7335092 atcattaatcagaaatcaataatttaaaaatgaatcaaac 7335131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 31520603 - 31520564
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  31520603 atcattaatccgtaattaacaatttaaaaatgaatcaaac 31520564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 31578926 - 31578887
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  31578926 atcattaatcaataatcaataatttaaaaatgaatcaaac 31578887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 32432751 - 32432790
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  32432751 atcatgaatcaataatcaacaatttaaaaatgaatcaaac 32432790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 32820915 - 32820876
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  32820915 atcattcatcaataatcaacaatttaaaaatgaatcaaac 32820876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 34362040 - 34362001
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  34362040 atcattaatcagtcattaacaatttaaaaatgaatcaaac 34362001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 35353407 - 35353442
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    |||||||||||| |||||||||||||||||||||||    
T  35353407 atcattaatcagcaatcaacaatttaaaaatgaatc 35353442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37347320 - 37347359
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  37347320 atcattaatccgtaattaacaatttaaaaatgaatcaaac 37347359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 37703360 - 37703321
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  37703360 atcattaatcaataatcaacaatttaaaaatgaattaaac 37703321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37704481 - 37704520
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  37704481 atcattaattagtaatcaacaatttacaaatgaatcaaac 37704520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 43925394 - 43925433
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  43925394 atcatgaatcactaatcaacaatttaaaaatgaatcaaac 43925433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 46480991 - 46480952
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  46480991 atcattaatcagtaatcaacaatttaaaaataaataaaac 46480952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 41764940 - 41764907
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    |||||||||||| |||||||||||||||||||||    
T  41764940 atcattaatcagcaatcaacaatttaaaaatgaa 41764907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 21991933 - 21991965
Alignment:
Q  256 atcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||| ||||||||||||||||||||||||||||    
T  21991933 atcattaatcaacaatttaaaaatgaatcaaac 21991965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 1946159 - 1946198
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1946159 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 1946198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 6091042 - 6091003
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6091042 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 6091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 5627716 - 5627754
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5627716 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 5627754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 3879799 - 3879760
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  3879799 atcatgaatcagtaatcaacaatttaaaaatgaatcaaac 3879760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 33892872 - 33892833
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  33892872 atcattaatcaataatcaacaatttaaaaatgaatcaaac 33892833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 20768406 - 20768440
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaat 283  Q
    |||||||||||||||||||||||||||||||||||    
T  20768406 atcattaatcagtaatcaacaatttaaaaatgaat 20768440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 4318682 - 4318643
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  4318682 atcattaatcattaatcaacaatttaaaaataaatcaaac 4318643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 7054632 - 7054593
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  7054632 atcattaatcattaatcaacaatttaaagatgaatcaaac 7054593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 21016978 - 21016940
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  21016978 atcatgaatcagtaatcaacaatttataaatgaatcaaa 21016940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 29182485 - 29182522
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    |||||||||||  |||||||||||||||||||||||||    
T  29182485 atcattaatcaacaatcaacaatttaaaaatgaatcaa 29182522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 33724117 - 33724080
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  33724117 cattaatcattaagcaacaatttaaaaatgaatcaaac 33724080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 6089227 - 6089259
Alignment:
Q  256 atcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||| ||||||||||||||||||||||||||||    
T  6089227 atcattaatcaacaatttaaaaatgaatcaaac 6089259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 8513552 - 8513584
Alignment:
Q  256 atcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||| ||||||||||||||||||||||||||||    
T  8513552 atcattaatcaacaatttaaaaatgaatcaaac 8513584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 1815625 - 1815664
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1815625 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 1815664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 7703833 - 7703872
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7703833 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 7703872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 32912466 - 32912427
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32912466 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 32912427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 33341722 - 33341761
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33341722 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 33341761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 34361378 - 34361339
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34361378 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 34361339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37775982 - 37776021
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37775982 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 37776021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 50765044 - 50765083
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50765044 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 50765083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 19089340 - 19089303
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19089340 atcattaatcagtaatcaacaatttaaaaatgaatcaa 19089303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 37663628 - 37663591
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37663628 atcattaatcagtaatcaacaatttaaaaatgaatcaa 37663591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 47254064 - 47254101
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47254064 atcattaatcagtaatcaacaatttaaaaatgaatcaa 47254101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 3042946 - 3042982
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  3042946 attaatcagtaatcaacaatttaaaaatgaatcaaac 3042982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 879435 - 879396
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  879435 atcattaataagtaatcaacaatttaaaaatgaatcaaac 879396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 4598306 - 4598345
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4598306 atcattaatcagcaatcaacaatttaaaaatgaatcaaac 4598345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 6864359 - 6864398
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  6864359 atcattaatcaataatcaacaatttaaaaatgaatcaaac 6864398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 7152091 - 7152052
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  7152091 atcattaatcaataatcaacaatttaaaaatgaatcaaac 7152052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 23761395 - 23761434
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  23761395 atcattaatcagtaatcaataatttaaaaatgaatcaaac 23761434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 25184437 - 25184476
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  25184437 atcattaatcagtaatcgacaatttaaaaatgaatcaaac 25184476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 26896412 - 26896447
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    ||||||||||||||||||||||||||||||||||||    
T  26896412 atcattaatcagtaatcaacaatttaaaaatgaatc 26896447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 30002528 - 30002489
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  30002528 atcattaatcagtaataaacaatttaaaaatgaatcaaac 30002489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 288
Target Start/End: Complemental strand, 34947978 - 34947943
Alignment:
Q  253 ttaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||    
T  34947978 ttaatcagtaatcaacaatttaaaaatgaatcaaac 34947943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 35020918 - 35020879
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  35020918 atcattaatcggtaatcaacaatttaaaaatgaatcaaac 35020879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 35025453 - 35025414
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  35025453 atcattaatcagcaatcaacaatttaaaaatgaatcaaac 35025414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 39400332 - 39400371
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  39400332 atcattaatcagcaatcaacaatttaaaaatgaatcaaac 39400371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 46884001 - 46883962
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  46884001 atcattaatcagtaatcaacaatttaaaaataaatcaaac 46883962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 50697566 - 50697605
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  50697566 atcattaattagtaatcaacaatttaaaaatgaatcaaac 50697605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 55240992 - 55240953
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  55240992 atcattaatcaataatcaacaatttaaaaatgaatcaaac 55240953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 55477778 - 55477739
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  55477778 atcattaatcagtaattaacaatttaaaaatgaatcaaac 55477739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 46888045 - 46888007
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  46888045 atcattaatcactaatcaacaatttaaaaatgaatcaaa 46888007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 37288054 - 37288091
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  37288054 cattaatcagtaatcaataatttaaaaatgaatcaaac 37288091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 17168037 - 17168076
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  17168037 atcattaattagtaatcaataatttaaaaatgaatcaaac 17168076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 19440535 - 19440496
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  19440535 atcattaatcagtaatcaataatttaaaaattaatcaaac 19440496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 23431879 - 23431918
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  23431879 atcattaattagtaatcaacaatttaaaaatgcatcaaac 23431918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 29584087 - 29584048
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  29584087 atcattaatcagtaatgaacgatttaaaaatgaatcaaac 29584048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 32579770 - 32579809
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  32579770 atcattaatcagcaatcaacaatttaaaaataaatcaaac 32579809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 288
Target Start/End: Original strand, 32592412 - 32592447
Alignment:
Q  253 ttaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32592412 ttaatcaataatcaacaatttaaaaatgaatcaaac 32592447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 33816403 - 33816368
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    |||||||||||| |||||||||||||||||||||||    
T  33816403 atcattaatcagcaatcaacaatttaaaaatgaatc 33816368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 36493576 - 36493537
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  36493576 atcattaatccgtaattaacaatttaaaaatgaatcaaac 36493537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 49376291 - 49376330
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  49376291 atcattaatcagtaatcaagaatttaaaaatgaattaaac 49376330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 42200056 - 42200094
Alignment:
Q  250 tcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  42200056 tcattaatcagtaatcaataatttaaaaattaatcaaac 42200094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 27396949 - 27396977
Alignment:
Q  260 gtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||    
T  27396949 gtaatcaacaatttaaaaatgaatcaaac 27396977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 3362570 - 3362609
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3362570 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 3362609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 4015774 - 4015813
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4015774 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 4015813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 11357242 - 11357203
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11357242 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 11357203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 20373124 - 20373085
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20373124 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 20373085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 21009662 - 21009623
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21009662 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 21009623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 24707976 - 24707937
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24707976 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 24707937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 39282967 - 39283006
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39282967 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 39283006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 44186378 - 44186339
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44186378 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 44186339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 47481838 - 47481877
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  47481838 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 47481877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 54506123 - 54506162
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  54506123 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 54506162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 38592013 - 38592051
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38592013 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 38592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 7327343 - 7327306
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7327343 atcattaatcagtaatcaacaatttaaaaatgaatcaa 7327306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 26941121 - 26941084
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26941121 atcattaatcagtaatcaacaatttaaaaatgaatcaa 26941084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 42505936 - 42505899
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42505936 atcattaatcagtaatcaacaatttaaaaatgaatcaa 42505899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 44891812 - 44891849
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44891812 atcattaatcagtaatcaacaatttaaaaatgaatcaa 44891849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 21193925 - 21193961
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  21193925 attaatcagtaatcaacaatttaaaaatgaatcaaac 21193961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 33698468 - 33698504
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatca 285  Q
    |||||||||||||||||||||||||||||||||||||    
T  33698468 atcattaatcagtaatcaacaatttaaaaatgaatca 33698504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 40552117 - 40552081
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  40552117 attaatcagtaatcaacaatttaaaaatgaatcaaac 40552081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 1090008 - 1090047
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  1090008 atcattaatcaataatcaacaatttaaaaatgaatcaaac 1090047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 14586541 - 14586502
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  14586541 atcattaatcagtaatcaacaatttaaaaataaatcaaac 14586502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 22445926 - 22445887
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  22445926 atcattaatcagtaatcaacaatttaaatatgaatcaaac 22445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 22622579 - 22622540
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22622579 atcattaatcagtaatcaactatttaaaaatgaatcaaac 22622540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 29099661 - 29099700
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  29099661 atcattaatcagcaatcaacaatttaaaaatgaatcaaac 29099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 36012454 - 36012493
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  36012454 atcattaatcagtaatcaacaatttaaaaataaatcaaac 36012493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37158023 - 37158062
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  37158023 atcattaatgagtaatcaacaatttaaaaatgaatcaaac 37158062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37203383 - 37203422
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  37203383 atcattaatgagtaatcaacaatttaaaaatgaatcaaac 37203422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 46297623 - 46297584
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  46297623 atcattaattagtaatcaacaatttaaaaatgaatcaaac 46297584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 48355256 - 48355295
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  48355256 atcattaatcagtaagcaacaatttaaaaatgaatcaaac 48355295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 50475133 - 50475172
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  50475133 atcattaatcagtaatcaataatttaaaaatgaatcaaac 50475172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 52040783 - 52040744
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  52040783 atcattaatgagtaatcaacaatttaaaaatgaatcaaac 52040744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 53229013 - 53228974
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  53229013 atcattaatcaataatcaacaatttaaaaatgaatcaaac 53228974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 11357020 - 11356984
Alignment:
Q  248 catcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11357020 catcattaattagtaatcaacaatttaaaaatgaatc 11356984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 2008254 - 2008293
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  2008254 atcagtaatcattaatcaacaatttaaaaatgaatcaaac 2008293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 4761509 - 4761470
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  4761509 atcattaatcagaaatcaacaatttgaaaatgaatcaaac 4761470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 33378646 - 33378607
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  33378646 atcattaatcaataatcaacgatttaaaaatgaatcaaac 33378607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 43975753 - 43975718
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    |||||||||||| |||||||||||||||||||||||    
T  43975753 atcattaatcagcaatcaacaatttaaaaatgaatc 43975718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 34133250 - 34133288
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  34133250 atcatgaatcggtaatcaacaatttaaaaatgaatcaaa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 40936288 - 40936325
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  40936288 atcattaatcggtaatcaacaatttaaaaataaatcaa 40936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 32373785 - 32373813
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaa 277  Q
    |||||||||||||||||||||||||||||    
T  32373785 atcattaatcagtaatcaacaatttaaaa 32373813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 281
Target Start/End: Complemental strand, 46994522 - 46994490
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatga 281  Q
    |||||||||||| ||||||||||||||||||||    
T  46994522 atcattaatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 7006817 - 7006778
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7006817 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 7006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 11366259 - 11366220
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11366259 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 11366220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 18494160 - 18494121
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18494160 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 18494121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 26357901 - 26357940
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26357901 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 26357940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 33660256 - 33660217
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33660256 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 33660217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 35959216 - 35959255
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35959216 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 35959255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 43648124 - 43648085
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43648124 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 43648085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 19500794 - 19500756
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19500794 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 19500756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 27349827 - 27349789
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27349827 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 27349789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 19424521 - 19424484
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19424521 atcattaatcagtaatcaacaatttaaaaatgaatcaa 19424484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 4763955 - 4763994
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4763955 atcattaatcagtaatcaataatttaaaaatgaatcaaac 4763994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 5881853 - 5881892
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  5881853 atcattattcagtaatcaacaatttaaaaatgaatcaaac 5881892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 33709111 - 33709072
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  33709111 atcattaatcattaatcaacaatttaaaaatgaatcaaac 33709072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 41961164 - 41961203
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  41961164 atcattaatcaataatcaacaatttaaaaatgaatcaaac 41961203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 44913991 - 44914030
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44913991 atcatgaatcagtaatcaacaatttaaaaatgaatcaaac 44914030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 31862176 - 31862214
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31862176 atcattaatcagtaatcaacgatttaaaaatgaatcaaa 31862214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 13711783 - 13711820
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13711783 atcattaatcagtaatcaacgatttaaaaatgaatcaa 13711820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 29242022 - 29241985
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29242022 cattaatcagcaatcaacaatttaaaaatgaatcaaac 29241985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 2325254 - 2325218
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||| ||||||||    
T  2325254 attaatcagtaatcaacaatttaaaaataaatcaaac 2325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 33550859 - 33550823
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| |||||||||||||||||||||||||||||||    
T  33550859 attaaccagtaatcaacaatttaaaaatgaatcaaac 33550823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 4167246 - 4167285
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  4167246 atcatgaatcagtaatcaacaatttaaaaatgaattaaac 4167285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 41051179 - 41051140
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  41051179 atcattaatcaataatcaacaattcaaaaatgaatcaaac 41051140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 43770727 - 43770688
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  43770727 atcattaattagaaatcaacaatttaaaaatgaatcaaac 43770688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 17054005 - 17053971
Alignment:
Q  254 taatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||| ||||||||||||||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaac 17053971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 17071646 - 17071612
Alignment:
Q  254 taatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||| ||||||||||||||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaac 17071612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 31570613 - 31570576
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    |||||||||||||||||||  |||||||||||||||||    
T  31570613 atcattaatcagtaatcaaatatttaaaaatgaatcaa 31570576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 37906034 - 37906067
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    |||||||||||||||| |||||||||||||||||    
T  37906034 atcattaatcagtaattaacaatttaaaaatgaa 37906067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 39167242 - 39167209
Alignment:
Q  255 aatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  39167242 aatcagtaatcaacaatttaaaaatgaataaaac 39167209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 277
Target Start/End: Original strand, 4478689 - 4478717
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaa 277  Q
    |||||||||||||||||||||||||||||    
T  4478689 atcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 33902341 - 33902377
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  33902341 attaatctgtaatcaacaatttaaaaataaatcaaac 33902377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 1359791 - 1359752
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1359791 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 1359752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 1547591 - 1547630
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1547591 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 1547630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 2960068 - 2960107
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2960068 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 2960107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 3309473 - 3309512
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3309473 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 3309512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 10923047 - 10923086
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10923047 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 10923086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 11742224 - 11742185
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11742224 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 11742185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 16415966 - 16416005
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16415966 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 16416005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 19899624 - 19899585
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19899624 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 19899585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 21289920 - 21289959
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21289920 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 21289959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 23999668 - 23999707
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23999668 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 23999707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 27763166 - 27763127
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27763166 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 27763127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 32216375 - 32216414
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32216375 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 32216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 34012238 - 34012199
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34012238 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 34012199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 37451605 - 37451644
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37451605 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 37451644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 46931730 - 46931769
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46931730 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 46931769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 48353862 - 48353901
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48353862 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 48353901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 9902910 - 9902872
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9902910 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 9902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 32267356 - 32267393
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32267356 cattaatcagtaatcaacaatttaaaaatgaatcaaac 32267393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 51129179 - 51129216
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51129179 atcattaatcagtaatcaacaatttaaaaatgaatcaa 51129216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 4330601 - 4330640
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  4330601 atcattaatcagtaatcaacaatataaaaatgaatcaaac 4330640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 15752349 - 15752388
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  15752349 atcattaatcagtaatcaacaatttaaaaatgaattaaac 15752388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 27563761 - 27563722
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  27563761 atcattaatcagtaatcaacaatttaaaaaagaatcaaac 27563722  T

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Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 28564639 - 28564600
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  28564639 atcattaatcaataatcaacaatttaaaaatgaatcaaac 28564600  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 39393704 - 39393743
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  39393704 atcattaatcagtaatcaacaatttaaaaatgaataaaac 39393743  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 47279509 - 47279548
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  47279509 atcattaattagtaatcaacaatttaaaaatgaatcaaac 47279548  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 38823534 - 38823572
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  38823534 atcattaatcagtaatcaacaatttaaaaatgaaacaaa 38823572  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 7078919 - 7078882
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7078919 atcattaatcaataatcaacaatttaaaaatgaatcaa 7078882  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 8222447 - 8222480
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    ||||||||||||||||||||||||||||||||||    
T  8222447 atcattaatcagtaatcaacaatttaaaaatgaa 8222480  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 25160952 - 25160985
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    ||||||||||||||||||||||||||||||||||    
T  25160952 atcattaatcagtaatcaacaatttaaaaatgaa 25160985  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 30254746 - 30254782
Alignment:
Q  252 attaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||| ||||||||||||||||||||||||||||    
T  30254746 attaatcaataatcaacaatttaaaaatgaatcaaac 30254782  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 238369 - 238330
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  238369 atcatgaatcagtaatccacaatttaaaaatgaatcaaac 238330  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 3535243 - 3535282
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  3535243 atcattaatcaacaatcaacaatttaaaaatgaatcaaac 3535282  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 15168416 - 15168451
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatc 284  Q
    |||||||||||| |||||||||||||||||||||||    
T  15168416 atcattaatcagcaatcaacaatttaaaaatgaatc 15168451  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 22171031 - 22171070
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  22171031 atcattaattagtaatcaacaatttaaaaataaatcaaac 22171070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 27227341 - 27227302
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  27227341 atcattaatcagtaatcaaccatttaaaaatgaattaaac 27227302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 27532837 - 27532799
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  27532837 atcattaatcagtaatcaacaa-ttaaaaatgaatcaaac 27532799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 28769973 - 28770012
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  28769973 atcattaattaataatcaacaatttaaaaatgaatcaaac 28770012  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 42721356 - 42721395
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  42721356 atcattaatgagtaatcaataatttaaaaatgaatcaaac 42721395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 10181861 - 10181824
Alignment:
Q  251 cattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||||||||  |||||||||||||||||||||||||||    
T  10181861 cattaatcaacaatcaacaatttaaaaatgaatcaaac 10181824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 30326808 - 30326775
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaa 282  Q
    ||||| ||||||||||||||||||||||||||||    
T  30326808 atcatcaatcagtaatcaacaatttaaaaatgaa 30326775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 18422971 - 18423003
Alignment:
Q  256 atcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    |||| ||||||||||||||||||||||||||||    
T  18422971 atcattaatcaacaatttaaaaatgaatcaaac 18423003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 8211 - 8248
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaa 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8211 atcattaatcagtaatcaacaatttaaaaatgaatcaa 8248  T

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Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 44280 - 44319
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  44280 atcattaatcagtaatcaacaatttaaaaatgaattaaac 44319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 154507 - 154468
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  154507 atcattaatcagtaatcaacaatttaaaaatgaattaaac 154468  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 267606 - 267638
Alignment:
Q  255 aatcagtaatcaacaatttaaaaatgaatcaaa 287  Q
    |||||||||||||||||||||||||||||||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaa 267638  T

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Target: scaffold0318 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 12233 - 12271
Alignment:
Q  249 atcattaatcagtaatcaacaatttaaaaatgaatcaaac 288  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  12233 atcattaatcagtaatcaacaatttaaaaat-aatcaaac 12271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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