View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3608_low_3 (Length: 462)

Name: NF3608_low_3
Description: NF3608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3608_low_3
NF3608_low_3
[»] chr7 (51 HSPs)
chr7 (12-446)||(41764605-41765034)
chr7 (12-208)||(48928057-48928253)
chr7 (12-179)||(35353313-35353480)
chr7 (12-183)||(37703283-37703454)
chr7 (12-179)||(9355615-9355782)
chr7 (12-207)||(29173728-29173922)
chr7 (12-177)||(44411331-44411496)
chr7 (12-186)||(18797532-18797706)
chr7 (12-190)||(31520519-31520697)
chr7 (12-183)||(17842369-17842540)
chr7 (12-183)||(37110079-37110250)
chr7 (12-179)||(37347226-37347393)
chr7 (12-212)||(24211946-24212147)
chr7 (14-177)||(10359005-10359168)
chr7 (12-183)||(30055732-30055903)
chr7 (12-179)||(31578853-31579020)
chr7 (12-179)||(32592996-32593162)
chr7 (12-175)||(32820846-32821009)
chr7 (12-179)||(46480918-46481085)
chr7 (12-186)||(4583124-4583298)
chr7 (15-183)||(27283952-27284122)
chr7 (12-208)||(5657240-5657437)
chr7 (12-208)||(12390409-12390605)
chr7 (31-179)||(26587881-26588029)
chr7 (12-179)||(6546724-6546891)
chr7 (12-179)||(8861490-8861657)
chr7 (12-179)||(15612548-15612715)
chr7 (12-183)||(37704387-37704558)
chr7 (12-186)||(23111397-23111571)
chr7 (31-175)||(22687455-22687599)
chr7 (12-183)||(7334999-7335169)
chr7 (12-179)||(26980511-26980678)
chr7 (12-179)||(32432657-32432824)
chr7 (12-186)||(10481810-10481984)
chr7 (12-138)||(12165948-12166074)
chr7 (12-171)||(43925306-43925459)
chr7 (12-175)||(25691337-25691500)
chr7 (12-179)||(21991841-21991999)
chr7 (12-162)||(11071411-11071558)
chr7 (12-179)||(15672548-15672718)
chr7 (23-177)||(34361967-34362123)
chr7 (12-113)||(33688117-33688218)
chr7 (95-208)||(38258867-38258980)
chr7 (12-97)||(43686245-43686330)
chr7 (12-175)||(44598871-44599034)
chr7 (352-448)||(41756661-41756757)
chr7 (12-74)||(38258750-38258812)
chr7 (12-63)||(48928469-48928520)
chr7 (12-97)||(38053666-38053751)
chr7 (51-114)||(27421219-27421282)
chr7 (133-209)||(12166215-12166291)
[»] chr1 (56 HSPs)
chr1 (12-179)||(14758258-14758425)
chr1 (12-190)||(15168322-15168500)
chr1 (12-175)||(2959974-2960137)
chr1 (12-183)||(37451511-37451682)
chr1 (12-209)||(34012135-34012332)
chr1 (12-186)||(8222354-8222528)
chr1 (12-207)||(32216281-32216476)
chr1 (12-175)||(48353768-48353931)
chr1 (12-162)||(16415872-16416022)
chr1 (12-209)||(19899521-19899719)
chr1 (13-175)||(27563692-27563854)
chr1 (12-183)||(28564562-28564733)
chr1 (12-186)||(10922953-10923127)
chr1 (12-174)||(27227273-27227435)
chr1 (12-183)||(15383159-15383331)
chr1 (12-175)||(7078850-7079013)
chr1 (12-175)||(11742155-11742318)
chr1 (12-210)||(46931635-46931834)
chr1 (12-175)||(47279415-47279578)
chr1 (12-168)||(25160858-25161015)
chr1 (23-212)||(27532732-27532920)
chr1 (14-179)||(30254651-30254816)
chr1 (12-188)||(40885039-40885216)
chr1 (12-183)||(51129085-51129254)
chr1 (12-175)||(238300-238463)
chr1 (12-175)||(3535149-3535312)
chr1 (12-183)||(32267260-32267431)
chr1 (15-183)||(27763089-27763258)
chr1 (31-179)||(1547516-1547664)
chr1 (12-180)||(9902836-9903004)
chr1 (12-183)||(23999573-23999745)
chr1 (12-179)||(27266984-27267150)
chr1 (12-179)||(47682277-47682444)
chr1 (12-179)||(31621331-31621504)
chr1 (15-190)||(21289829-21290004)
chr1 (12-179)||(38823440-38823607)
chr1 (12-157)||(1359740-1359885)
chr1 (12-170)||(3309379-3309538)
chr1 (12-175)||(4330507-4330670)
chr1 (12-183)||(28769879-28770050)
chr1 (12-139)||(30326775-30326902)
chr1 (17-183)||(39393615-39393781)
chr1 (12-215)||(15752255-15752458)
chr1 (12-210)||(22170937-22171135)
chr1 (12-177)||(10181792-10181958)
chr1 (12-134)||(37618729-37618851)
chr1 (12-186)||(42721265-42721435)
chr1 (21-179)||(31962851-31963010)
chr1 (12-162)||(41926383-41926532)
chr1 (12-175)||(33725398-33725550)
chr1 (24-121)||(18422889-18422986)
chr1 (12-100)||(38759759-38759847)
chr1 (119-179)||(48620922-48620982)
chr1 (353-435)||(26973807-26973889)
chr1 (143-179)||(38759847-38759883)
chr1 (12-58)||(48620854-48620900)
[»] chr4 (52 HSPs)
chr4 (12-207)||(28002772-28002967)
chr4 (12-179)||(33816330-33816497)
chr4 (12-190)||(32579676-32579854)
chr4 (12-183)||(36493499-36493670)
chr4 (12-209)||(19440432-19440629)
chr4 (12-208)||(6864265-6864461)
chr4 (10-186)||(7152011-7152187)
chr4 (12-216)||(30002418-30002622)
chr4 (12-183)||(3042849-3043020)
chr4 (15-186)||(25184346-25184517)
chr4 (12-183)||(37775888-37776059)
chr4 (12-177)||(50764950-50765115)
chr4 (12-179)||(7703739-7703906)
chr4 (12-179)||(33341628-33341795)
chr4 (12-179)||(39400238-39400405)
chr4 (12-179)||(47253970-47254137)
chr4 (12-207)||(35020817-35021016)
chr4 (10-190)||(25700859-25701039)
chr4 (12-179)||(34361305-34361473)
chr4 (12-179)||(49376197-49376364)
chr4 (12-186)||(879355-879529)
chr4 (12-186)||(1815531-1815704)
chr4 (12-178)||(5047781-5047947)
chr4 (17-179)||(55240919-55241081)
chr4 (12-162)||(55477722-55477872)
chr4 (12-209)||(19089237-19089434)
chr4 (12-179)||(37287958-37288126)
chr4 (12-179)||(23761301-23761468)
chr4 (12-163)||(34947925-34948076)
chr4 (12-183)||(37663551-37663722)
chr4 (24-179)||(46887972-46888127)
chr4 (14-179)||(4205216-4205381)
chr4 (12-179)||(4598212-4598379)
chr4 (12-183)||(29584010-29584181)
chr4 (17-184)||(32592319-32592486)
chr4 (44-179)||(35025381-35025515)
chr4 (12-179)||(32912393-32912561)
chr4 (12-179)||(50697471-50697639)
chr4 (12-179)||(17167943-17168110)
chr4 (12-179)||(17173520-17173687)
chr4 (12-183)||(17272194-17272365)
chr4 (18-179)||(9139465-9139624)
chr4 (25-183)||(26896330-26896489)
chr4 (61-179)||(23431834-23431952)
chr4 (23-168)||(27396857-27397000)
chr4 (23-175)||(46883932-46884080)
chr4 (88-175)||(38012568-38012655)
chr4 (12-183)||(42199959-42200131)
chr4 (12-97)||(38012084-38012169)
chr4 (12-179)||(4934026-4934183)
chr4 (12-58)||(35025531-35025577)
chr4 (23-86)||(56050171-56050234)
[»] chr2 (44 HSPs)
chr2 (12-190)||(41465731-41465909)
chr2 (23-207)||(26357818-26358002)
chr2 (23-179)||(18494087-18494243)
chr2 (12-207)||(4167152-4167347)
chr2 (12-179)||(7006744-7006911)
chr2 (12-184)||(35959126-35959294)
chr2 (24-208)||(41961082-41961266)
chr2 (12-207)||(2325156-2325351)
chr2 (12-186)||(11366179-11366354)
chr2 (12-179)||(33660183-33660350)
chr2 (12-183)||(43648047-43648218)
chr2 (12-179)||(43770654-43770821)
chr2 (12-190)||(19289118-19289296)
chr2 (12-175)||(44913894-44914060)
chr2 (23-175)||(5881770-5881922)
chr2 (12-175)||(33709042-33709205)
chr2 (12-186)||(39167168-39167342)
chr2 (12-168)||(4763861-4764017)
chr2 (12-187)||(37905940-37906116)
chr2 (12-179)||(3177169-3177336)
chr2 (12-179)||(31862082-31862249)
chr2 (15-161)||(19500739-19500885)
chr2 (18-139)||(27349794-27349915)
chr2 (12-205)||(31570514-31570707)
chr2 (12-190)||(13711689-13711867)
chr2 (64-212)||(19424415-19424563)
chr2 (12-135)||(4263926-4264049)
chr2 (12-168)||(33550800-33550960)
chr2 (12-134)||(4478595-4478717)
chr2 (12-174)||(29241956-29242111)
chr2 (24-173)||(41051112-41051260)
chr2 (12-117)||(19314074-19314182)
chr2 (12-117)||(44286179-44286284)
chr2 (12-87)||(45327950-45328025)
chr2 (85-175)||(33902317-33902407)
chr2 (70-179)||(18257344-18257453)
chr2 (120-179)||(45328028-45328087)
chr2 (63-175)||(41463400-41463512)
chr2 (17-87)||(36642223-36642293)
chr2 (12-74)||(17071648-17071710)
chr2 (12-74)||(17054007-17054069)
chr2 (111-156)||(17053960-17054005)
chr2 (111-156)||(17071601-17071646)
chr2 (12-56)||(41463779-41463823)
[»] chr5 (52 HSPs)
chr5 (16-190)||(33908467-33908640)
chr5 (12-179)||(699380-699547)
chr5 (12-179)||(24886317-24886484)
chr5 (12-179)||(22981023-22981190)
chr5 (12-186)||(2888216-2888390)
chr5 (12-183)||(31705386-31705557)
chr5 (12-189)||(35826254-35826431)
chr5 (12-186)||(5830122-5830296)
chr5 (12-179)||(22255412-22255579)
chr5 (12-179)||(31786424-31786591)
chr5 (12-179)||(35511260-35511427)
chr5 (12-207)||(40133615-40133810)
chr5 (18-179)||(15992318-15992479)
chr5 (31-179)||(39573060-39573208)
chr5 (12-175)||(14409123-14409286)
chr5 (12-175)||(25669806-25669969)
chr5 (12-179)||(42342951-42343118)
chr5 (17-178)||(8741664-8741825)
chr5 (23-183)||(35504606-35504766)
chr5 (16-179)||(7208642-7208805)
chr5 (12-179)||(12910585-12910752)
chr5 (15-186)||(22973853-22974024)
chr5 (12-179)||(32563370-32563537)
chr5 (12-207)||(36866992-36867187)
chr5 (12-186)||(36860654-36860828)
chr5 (15-179)||(8437198-8437362)
chr5 (15-183)||(17157805-17157973)
chr5 (12-179)||(22019853-22020020)
chr5 (12-179)||(25889600-25889767)
chr5 (12-175)||(38528019-38528182)
chr5 (12-175)||(9200454-9200617)
chr5 (24-179)||(19120101-19120256)
chr5 (12-183)||(27330534-27330705)
chr5 (12-179)||(5837785-5837952)
chr5 (17-179)||(7693456-7693618)
chr5 (12-190)||(43308427-43308605)
chr5 (38-179)||(28416329-28416470)
chr5 (12-175)||(35934126-35934289)
chr5 (12-217)||(13956104-13956307)
chr5 (12-179)||(23116008-23116167)
chr5 (30-175)||(25500708-25500853)
chr5 (12-186)||(27318259-27318432)
chr5 (12-175)||(15724718-15724881)
chr5 (81-183)||(43254154-43254256)
chr5 (12-175)||(30969106-30969269)
chr5 (12-133)||(1428983-1429107)
chr5 (44-175)||(8466988-8467119)
chr5 (12-190)||(21088535-21088711)
chr5 (42-179)||(26269069-26269206)
chr5 (12-179)||(14919317-14919473)
chr5 (12-217)||(23954542-23954734)
chr5 (17-109)||(6824329-6824420)
[»] chr8 (42 HSPs)
chr8 (12-207)||(33906441-33906634)
chr8 (12-179)||(16446669-16446836)
chr8 (12-207)||(34895191-34895386)
chr8 (12-179)||(35859163-35859330)
chr8 (13-190)||(12587812-12587989)
chr8 (15-183)||(1149422-1149590)
chr8 (12-179)||(4132480-4132647)
chr8 (12-179)||(7890751-7890918)
chr8 (15-186)||(43643382-43643553)
chr8 (12-183)||(8803606-8803778)
chr8 (12-175)||(23854229-23854392)
chr8 (12-175)||(27082636-27082799)
chr8 (12-179)||(37970313-37970480)
chr8 (12-190)||(35459494-35459672)
chr8 (23-179)||(5299740-5299896)
chr8 (12-183)||(11727253-11727425)
chr8 (12-179)||(38644207-38644374)
chr8 (10-175)||(1953786-1953951)
chr8 (12-208)||(1205156-1205352)
chr8 (12-175)||(466061-466224)
chr8 (12-179)||(34951851-34952018)
chr8 (12-162)||(16223092-16223242)
chr8 (15-183)||(40862651-40862820)
chr8 (12-179)||(44869726-44869893)
chr8 (25-183)||(18259321-18259479)
chr8 (31-173)||(24823194-24823336)
chr8 (12-137)||(1149756-1149881)
chr8 (12-179)||(31933680-31933847)
chr8 (12-175)||(36694764-36694927)
chr8 (38-183)||(33198057-33198202)
chr8 (12-155)||(6098331-6098479)
chr8 (12-186)||(10554991-10555165)
chr8 (12-175)||(39098917-39099080)
chr8 (12-179)||(12876339-12876506)
chr8 (12-175)||(30654381-30654544)
chr8 (12-139)||(9864377-9864504)
chr8 (84-179)||(41362723-41362818)
chr8 (83-207)||(43025974-43026099)
chr8 (12-97)||(13307852-13307936)
chr8 (13-104)||(34463704-34463792)
chr8 (145-190)||(9864533-9864578)
chr8 (143-183)||(13307939-13307979)
[»] chr6 (16 HSPs)
chr6 (12-211)||(20768312-20768511)
chr6 (12-215)||(7234783-7234989)
chr6 (12-175)||(3879730-3879893)
chr6 (12-207)||(6090941-6091136)
chr6 (12-183)||(33619055-33619234)
chr6 (24-179)||(33892799-33892954)
chr6 (12-179)||(1946064-1946233)
chr6 (12-175)||(5627621-5627785)
chr6 (12-162)||(4318626-4318776)
chr6 (12-177)||(29182394-29182556)
chr6 (35-179)||(7054559-7054704)
chr6 (12-179)||(8513458-8513618)
chr6 (12-172)||(6089133-6089286)
chr6 (12-168)||(21016916-21017066)
chr6 (108-163)||(33724062-33724117)
chr6 (12-68)||(30353256-30353312)
[»] chr3 (60 HSPs)
chr3 (12-173)||(22451189-22451350)
chr3 (23-186)||(43975673-43975836)
chr3 (12-184)||(46297545-46297717)
chr3 (12-179)||(11357169-11357336)
chr3 (12-207)||(26941020-26941215)
chr3 (12-179)||(40552047-40552214)
chr3 (12-190)||(48355162-48355340)
chr3 (23-179)||(4015691-4015847)
chr3 (12-179)||(52040710-52040877)
chr3 (12-175)||(53228944-53229107)
chr3 (17-179)||(33698379-33698541)
chr3 (10-179)||(1089913-1090081)
chr3 (12-175)||(22622510-22622673)
chr3 (13-208)||(33378544-33378739)
chr3 (12-186)||(24707896-24708070)
chr3 (12-175)||(29099567-29099730)
chr3 (12-179)||(39282873-39283040)
chr3 (12-183)||(42505859-42506030)
chr3 (10-183)||(3362474-3362647)
chr3 (12-216)||(21009552-21009757)
chr3 (12-183)||(54506028-54506200)
chr3 (12-179)||(14586468-14586634)
chr3 (12-183)||(44186301-44186472)
chr3 (12-179)||(2008153-2008327)
chr3 (23-179)||(37157940-37158096)
chr3 (12-183)||(25579960-25580131)
chr3 (24-183)||(40936206-40936365)
chr3 (12-183)||(47481743-47481915)
chr3 (12-175)||(7327274-7327437)
chr3 (12-179)||(22445853-22446020)
chr3 (12-186)||(51212558-51212726)
chr3 (23-179)||(37203300-37203456)
chr3 (12-179)||(21193828-21193995)
chr3 (12-179)||(44891718-44891885)
chr3 (21-183)||(27480142-27480308)
chr3 (12-138)||(46994490-46994616)
chr3 (12-177)||(4761438-4761603)
chr3 (23-179)||(36012371-36012528)
chr3 (12-175)||(32373691-32373853)
chr3 (12-139)||(34133156-34133283)
chr3 (12-186)||(3654980-3655157)
chr3 (12-179)||(11356946-11357105)
chr3 (12-183)||(24488745-24488917)
chr3 (12-179)||(29164030-29164190)
chr3 (12-122)||(54828546-54828656)
chr3 (12-172)||(50475032-50475199)
chr3 (90-179)||(20373051-20373140)
chr3 (12-139)||(38591919-38592046)
chr3 (12-106)||(45174727-45174821)
chr3 (12-179)||(11467045-11467198)
chr3 (12-74)||(20373137-20373199)
chr3 (12-97)||(43348478-43348563)
chr3 (25-104)||(53811597-53811676)
chr3 (44-106)||(11835494-11835556)
chr3 (121-183)||(35844577-35844639)
chr3 (352-417)||(36806094-36806159)
chr3 (351-405)||(49301577-49301631)
chr3 (152-205)||(13498678-13498731)
chr3 (145-190)||(34133312-34133357)
chr3 (352-417)||(36515067-36515132)
[»] scaffold0002 (3 HSPs)
scaffold0002 (12-173)||(408223-408384)
scaffold0002 (12-174)||(93894-94055)
scaffold0002 (12-171)||(364-517)
[»] scaffold0291 (1 HSPs)
scaffold0291 (12-183)||(8117-8288)
[»] scaffold0318 (1 HSPs)
scaffold0318 (12-177)||(12139-12303)
[»] scaffold0061 (1 HSPs)
scaffold0061 (12-179)||(44186-44353)
[»] scaffold0017 (1 HSPs)
scaffold0017 (12-179)||(154434-154601)
[»] scaffold0022 (1 HSPs)
scaffold0022 (12-183)||(145799-145971)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-179)||(267515-267673)
[»] scaffold0009 (1 HSPs)
scaffold0009 (60-127)||(100993-101058)


Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 12 - 446
Target Start/End: Complemental strand, 41765034 - 41764605
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  41765034 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtacatgtaagtccaagattttgcaagcattactggatgaattattattgatcatt 41764935  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatta 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||  || ||| |||||||||    
T  41764934 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaatttcccgactccaccgtagaaactcccatta 41764835  T
Q  212 attaatggatagaatnnnnnnnnttgactacaataaatgtatgtatgatatcttttaggaaaatgctaagaagtgttcacttactctagactagaatgca 311  Q
    |||||| ||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     ||||||||||    
T  41764834 attaattgatagaataaaaaaaattgactacaataaatgtatgtatgatatcttttaagaaaatgctaagaagtgttcacttact-----ctagaatgca 41764740  T
Q  312 tgtactaagatttttaagnnnnnnnggctagtgatagatttacccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttccaataggg 411  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41764739 tgtactaagatttttaagaaaaaaatgctagtgatagatttacccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttccaataggg 41764640  T
Q  412 atatttttcggaaaggacattgatgtagtctttga 446  Q
    |||||||||||||||||||||||||||||||||||    
T  41764639 atatttttcggaaaggacattgatgtagtctttga 41764605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 48928253 - 48928057
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  48928253 atcatcaactatgtttgcatgttaaaaatgccaacgatgaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 48928154  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    ||||| ||||||||||||||||||| || |||||||| |||||||||||||  |||| ||||||||||||||||||||| ||  || ||||||||||    
T  48928153 aatcaacaatcaacaatttaaaaataaatcgaacatttagatcaaaattaatttttttaaaaaagtcaattttctaactgcaccgtagaagctccca 48928057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 35353313 - 35353480
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||| || |||||||||||| |||||||||||||||||||||| | |||||||||||    
T  35353313 atcatcaactatatttgcatgttaaagatgtcaacgataaaatagtacatttaagtccaagatgttgcaagcattactagatgaatcactattgatcatt 35353412  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  35353413 aatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtca 35353480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 37703454 - 37703283
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  37703454 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 37703355  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||  |||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||    
T  37703354 aatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtcaattt 37703283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 9355782 - 9355615
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  9355782 atcatcaactatgtttgcatgttaaagatgccaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcatt 9355683  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||  ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  9355682 aatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 9355615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 29173728 - 29173922
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||     
T  29173728 atcatcaactctgtttgcatgttaaa-atgccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatg 29173826  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||| |||||| ||| ||  || |||||||||    
T  29173827 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagttttctgactgcatcgtagaagctccc 29173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 44411496 - 44411331
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  44411496 atcatcaactttgtttgcatgttaaagatgccaacgataaaatattatctgtaagtccaagatgttgcaagcattactagatgaattaatattgaccatt 44411397  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    |||||| |||||||||||||||||||||   ||||||||||||| ||||||||||| |||||||||    
T  44411396 aatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataattaacctttccaaaaaagt 44411331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 18797532 - 18797706
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| || || || ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  18797532 atcatcaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 18797631  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||| ||||||    
T  18797632 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttttct 18797706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 31520697 - 31520519
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  31520697 atcatcaactctatttgcatgttaaagatgccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactcgatgaattactattgatcatt 31520598  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||| | ||| ||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  31520597 aatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtcagtttcctaact 31520519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 17842540 - 17842369
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  17842540 atcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcatt 17842441  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| ||| |||||||||||||||    
T  17842440 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttccaaaaaagtcaattt 17842369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 37110079 - 37110250
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  37110079 atcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 37110178  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| ||| ||||||| |||||||    
T  37110179 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttccaaaaaaatcaattt 37110250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 37347226 - 37347393
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  37347226 atcatcaactctgtttgcatgttaaagatgccaatgataaaatagtatctgtaagtccaagatattgcaagcattactcgatgaattactattgatcatt 37347325  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||| | ||| ||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||    
T  37347326 aatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtca 37347393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 24211946 - 24212147
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | |||||||||||||||| |||||||| ||||||||  | |||||||||||| |||||||||||||||||||||| || ||||||||||    
T  24211946 atcatcaactttatttgcatgttaaagattccaacgataaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcat 24212045  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatt 210  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||| ||| || ||| ||  || ||||||| ||||    
T  24212046 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctctcatt 24212145  T
Q  211 aa 212  Q
    ||    
T  24212146 aa 24212147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10359168 - 10359005
Alignment:
Q  14 catcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaa 113  Q
    |||||||| ||||||||||||||||||| ||||||| || |||||  |||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  10359168 catcaactctgtttgcatgttaaagatgtcaacgataaattagtacttgtaagtccaagattttgcaagcattactaaatgatttactattgatcattaa 10359069  T
Q  114 tcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    |||  ||||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||||    
T  10359068 tcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaattaactttttcaaaaaagt 10359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 30055732 - 30055903
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||  |||| ||||||||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  30055732 atcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 30055831  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | | | |||| |||||||||||| || ||||||||||||||||    
T  30055832 aatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaattt 30055903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 31579020 - 31578853
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | |||||||||||||||| |||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  31579020 atcatcaactttatttgcatgttaaagattccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 31578921  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||  |||||| |||||||||||||| | |||| ||| |||||||||||| |||||||||||||||    
T  31578920 aatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaaattaactttttcaaaaaagtca 31578853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 32593162 - 32592996
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || |||  |||||||||| ||||| ||| |||||||    
T  32593162 atcatcaactatgtttgcatgttaaagatgtcaacgttaaaatagtacatgtaagtccaagatgttacaaatattactagataaattactatggatcatt 32593063  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||    
T  32593062 aatcagcaatcaacaattt-aaaatgaattgaacattaagatcaaaattaactttttcaaaaaagtca 32592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 32821009 - 32820846
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||| ||||||    
T  32821009 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattaatcatt 32820910  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
     ||||  ||||||||||||||||||||| | ||||||||||||||||||||| |||| ||||||    
T  32820909 catcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttaaaaaaa 32820846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 46481085 - 46480918
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||| ||||||||||||||||||| ||||||| |||||||| ||||||||| ||||| |||||| ||||||||||||||||| |||||||||||    
T  46481085 atcattaactttgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtctaagatgttgcaaacattactagatgaattactattgatcatt 46480986  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||||||||||||||| ||   ||||||||||||| ||||||| |||||||||||||||    
T  46480985 aatcagtaatcaacaatttaaaaataaataaaacattaagatcataattaactttttcaaaaaagtca 46480918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 4583124 - 4583298
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||||| |||||| |||||||||||||| ||||||||| |||| |||||     
T  4583124 atcatcaactatgtttgtatgttaaagatgtcaacgatcaaataatatttgtaagttcaagatgttgcaagcattactggatgaattactattaatcatg 4583223  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||||||  ||||||||||||||||||||   ||||||||||| ||||||||| ||||||||||||||||||||||    
T  4583224 aatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcaattttct 4583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 27283952 - 27284122
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    |||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  27283952 atcaactatgtttgcatgttaaagattccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 27284051  T
Q  115 cagcaatcaacaatttaaaaat-gaaccgaacattaagatcaaaattaaccttttc-aaaaaagtcaattt 183  Q
    ||| |||||| |||||||||||  || | |||||||| ||||||||||| |||||| ||||||||||||||    
T  27284052 cagtaatcaataatttaaaaataaaatcaaacattaaaatcaaaattaatcttttcaaaaaaagtcaattt 27284122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 5657437 - 5657240
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  5657437 atcagcaactatgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 5657338  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacatt-aagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    ||| || |||||| ||||||||||||||   | |||| ||||| ||||||||| |||||||||| |||| |||  ||||| || ||| ||||||||||    
T  5657337 aatgagtaatcaaaaatttaaaaatgaataaatcattaaagattaaaattaactttttcaaaaatgtcagtttcataactgcattgtagaagctccca 5657240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 12390605 - 12390409
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||  | |||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||| ||||||||||||||||| |||| ||||||    
T  12390605 atcatcaactcagcttgcatgttaaagatgccaatgataaaatagtacatgtaagtccaagatgttgcaaccattactagatgaattactatttatcatt 12390506  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    |||||| |||  ||||||||||||||||   ||||||||||||||||||||| ||| ||||||||||||||| || ||| ||  || ||||||||||    
T  12390505 aatcagtaattgacaatttaaaaatgaaataaacattaagatcaaaattaacttttccaaaaaagtcaatttcctgacttcaccgtagaagctccca 12390409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 26588029 - 26587881
Alignment:
Q  31 tgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaattt 130  Q
    ||||||||||||||||||| ||||| || ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  26588029 tgttaaagatgccaacgataaaataatacatgtaagtccaagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaattt 26587930  T
Q  131 aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| || | ||||||||||| ||||||||| |||||||||||||||    
T  26587929 aaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtca 26587881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 6546724 - 6546891
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||| |||||||||||||||||||| ||||||||  |||||||| |||||   |||||||||||||||||||||| |||||||||||    
T  6546724 atcagcaactctgtttgtatgttaaagatgccaacgataaaatagtacctgtaagtctaagatgaggcaagcattactagatgaattactattgatcatt 6546823  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | | ||||||||| ||||||||| |||||||||||||||    
T  6546824 aatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtca 6546891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 8861490 - 8861657
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | |||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||||| || |||||||||||    
T  8861490 atcagcaactctctttgcatgttaaagataccaacgataaaatagtacatgtaagtctaagatgttgcatgcattactagatgaaatactattgatcatt 8861589  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||| |||||| ||||||||| |||||||||||||||    
T  8861590 aatcagtaatcaacaatttaaaaatgaatcaaacactaagattaaaattaactttttcaaaaaagtca 8861657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 15612715 - 15612548
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||| ||| ||||||||  |||||||| ||||| |||||||||||||||||||||||| | |||||||||    
T  15612715 atcagcaactctgtttgcatgttaaagatgccaatgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaattattgttgatcatt 15612616  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | | ||||||||| ||||||||| |||| ||||||||||    
T  15612615 aatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttaaaaaaagtca 15612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 37704387 - 37704558
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  37704387 atcatcaactctatttgcatgttaaagatgccaacgataaaatagtatctgtaagtccaagatgttgcaagcattaccagatgaattactattgatcatt 37704486  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||| || ||||||||||||| ||||||| | |||||||| ||||| ||||   ||| |||||||||||||||    
T  37704487 aattagtaatcaacaatttacaaatgaatcaaacattaaaatcaagattagtttttccaaaaaagtcaattt 37704558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 23111397 - 23111571
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| |||||| || ||||| ||| ||||||||||||| |||||| ||||||||||     
T  23111397 atcatcaactctgtttgcatgttaaagataacaacgataaaatagtacatgtaaatcaaagatgttgaaagcattactagaagaattactattgatcata 23111496  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||| ||||| |||| |||||||||| ||||||    
T  23111497 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaacttttttaaaaaagtcagttttct 23111571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 22687455 - 22687599
Alignment:
Q  31 tgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaattt 130  Q
    |||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  22687455 tgttaaggatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaattt 22687554  T
Q  131 aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||||||| |  |||||||||| ||||||||| |||||||||||    
T  22687555 aaaaatgaatcatacattaagattaaaattaactttttcaaaaaa 22687599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 7334999 - 7335169
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||| ||||| ||||||||||| || || || ||||||||  ||||| |||||||| |||||||||||||||||||||||| |||| ||||||    
T  7334999 atcatcaacta-gtttgaatgttaaagattccgacaataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattaatcatt 7335097  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||    
T  7335098 aatcagaaatcaataatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcaattt 7335169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 26980511 - 26980678
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| |||||||||||||||| | |||||||||    
T  26980511 atcagcaactctatttgcatgttaaagatgtcaacgataaaatagtatctgtaagtctaagatgttgcaagtattactagatgaattattgttgatcatt 26980610  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||| | ||||||||||||||||||||| | | ||||||||| ||||||||| |||||||||||||||    
T  26980611 aatcggtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtca 26980678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 32432657 - 32432824
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||  ||||||||| ||||||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||| |||| |||||     
T  32432657 atcatcaacactgtttgcatattaaagatgccaacgataaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattattattaatcatg 32432756  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||  ||||||||||||||||||||| | ||||||||||| |||| |||| |||| ||||||||||    
T  32432757 aatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaagtaacttttttaaaaaagtca 32432824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 10481810 - 10481984
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | ||||||||| |||||| ||||| || |||||||||  ||||||||||||| ||||||| |||||||||||||||| |||||||| ||    
T  10481810 atcatcaactctctttgcatgtcaaagattccaacaataaaatagtatccgtaagtccaagatgttgcaagtattactagatgaattactattgatcgtt 10481909  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||| |||||||||||||| ||   || |||||||||||||||||| ||||||||||||||| ||||||    
T  10481910 aatcagtaattaacaatttaaaaataaattaaatattaagatcaaaattaactttttcaaaaaagtcagttttct 10481984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 12165948 - 12166074
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  12165948 atcagcaactctgtttgcatgttaaagatgacaacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 12166047  T
Q  112 aatcagcaatcaacaatttaaaaatga 138  Q
    |||||| ||||||||||||||||||||    
T  12166048 aatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 43925306 - 43925459
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||       ||||||||| |||||||||||||||||||||||| |||| |||||     
T  43925306 atcatcaactctgtttgcatgttaaagatgccaacgataaaataatac------gtccaagatgttgcaagcattactagatgaattactattaatcatg 43925399  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaa 171  Q
    |||||  ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||    
T  43925400 aatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaa 43925459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 25691500 - 25691337
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||| ||||||||||  |||||| |||||  | |||||||| ||| || |||||| ||||||||||||||||| |||||||||||    
T  25691500 atcagcaactctgtttgcacgttaaagatgttaacgataaaataacacatgtaagttcaaaatgttgcaaacattactagatgaattactattgatcatt 25691401  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||  |||| ||||||    
T  25691400 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaattttttaaaaaa 25691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 21991841 - 21991999
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||||  |||||||||||||| |||||||||     |||||||||| ||||||||||     
T  21991841 atcagcaactttgtttgcatgttaaagatgtcaacgataaaatagtacctgtaagtccaagatgttgcaagca-----agatgaattactattgatcatc 21991935  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    | |    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  21991936 att----aatcaacaatttaaaaatgaatcaaacattaagattaaaattaaccttttcaaaaaagtca 21991999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 11071411 - 11071558
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||| ||||||||||||   ||||||| ||||| ||  |||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  11071411 atcatcaactttgttcgcatgttaaaga---caacgataaaataatacctgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 11071507  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    |||||  ||||||||||||||||||||| | |||||||| |||| ||||||    
T  11071508 aatcattaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 15672718 - 15672548
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaata---gtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatc 108  Q
    |||||||||| | |||| |||||||||||||||||||| |||||   |||  ||||||||||| || |||||||||||||||||||||||| ||||||||    
T  15672718 atcatcaactctatttgaatgttaaagatgccaacgataaaataatagtacctgtaagtccaaaatgttgcaagcattactagatgaattactattgatc 15672619  T
Q  109 attaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||  ||||  |||||||||||||||||||||   ||||||||| | ||||||||  |||||||||||||||    
T  15672618 atgcatcaataatcaacaatttaaaaatgaattaaacattaaggttaaaattaattttttcaaaaaagtca 15672548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 34362123 - 34361967
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||| ||  ||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||  ||     
T  34362123 tgtttgcatgttaaaaatatcaacgataaaatagtatctgtaagtccaagatattgcaaacattactagatgaattacttttgatcattaatcagtcatt 34362024  T
Q  123 aacaatttaaaaatgaaccgaacatt-aaga-tcaaaattaaccttttcaaaaaagt 177  Q
    ||||||||||||||||| | |||||| |||| | ||||||||| |||||||||||||    
T  34362023 aacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagt 34361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 33688218 - 33688117
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||| |||||||||| ||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  33688218 atcagcaactctgtttgcaagttaaagatgtcaatgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattgctattgatcatt 33688119  T
Q  112 aa 113  Q
    ||    
T  33688118 aa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 38258867 - 38258980
Alignment:
Q  95 aattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccag 194  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| ||| |||||| ||| ||     
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctgactgcac 38258966  T
Q  195 tgtggaagctccca 208  Q
     || ||||||||||    
T  38258967 cgtagaagctccca 38258980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 43686245 - 43686330
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat 97  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||| |||||||    
T  43686245 atcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaat 43686330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 44598871 - 44599034
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||| || ||||||||| ||||| || ||||||||||||||||||  | |||||||||||    
T  44598871 atcaacaactctgtttgcatgttaaagatgacaacgataaaataatacatgtaagtctaagatgttacaagcattactagatgaa--actattgatcatt 44598968  T
Q  112 aatc---agcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||   |  |||||||||||| |||||||| | | | ||||||| ||||||||  |||||||||||    
T  44598969 aatcaataataatcaacaattt-aaaatgaatcaatcgttaagattaaaattaattttttcaaaaaa 44599034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 448
Target Start/End: Complemental strand, 41756757 - 41756661
Alignment:
Q  352 tacccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttccaatagggatatttttcggaaaggacattgatgtagtctttgatg 448  Q
    ||||||||||||||||| ||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||  |||||||| || ||| |||||    
T  41756757 tacccaatcatggcaagaaagcatgaaatgatcagctccaaggcttcggttccaaaagggatatttttcggaaaccacattgatataatctgtgatg 41756661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 38258750 - 38258812
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagat 74  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||||    
T  38258750 atcatcaactttgtttgcatgttaaagattccaacgataaaatagtacctgtaagtccaagat 38258812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 48928520 - 48928469
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgt 63  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  48928520 atcatcaactatgtttgcatgttaaaaatgccaacgataaaatagtacatgt 48928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 38053666 - 38053751
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat 97  Q
    |||||||||| | |||| ||||||||||| ||||| || ||||||||  |||||||||||||| |||||| ||||| | |||||||    
T  38053666 atcatcaactctatttggatgttaaagattccaacaataaaatagtacctgtaagtccaagatgttgcaaacattatttgatgaat 38053751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 27421282 - 27421219
Alignment:
Q  51 aaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    |||||||| ||||||||||||||| ||||||   |||| ||||||| |||||||||||||||||    
T  27421282 aaatagtacatgtaagtccaagatgttgcaaatgttacaagatgaaataatattgatcattaat 27421219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 12166215 - 12166291
Alignment:
Q  133 aaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccat 209  Q
    ||||||| | ||||||||||| ||||||||| |||| | |||||||| |||  | ||| |||||| |||||||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaacttttttagaaaagtcagtttcatgactgcagtgtagaagctcccat 12166291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 4e-73; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 14758258 - 14758425
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14758258 atcatcaactatgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 14758357  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  14758358 aatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtca 14758425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 15168322 - 15168500
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |||||| |||||||||||| ||||||||||| |||||||||||    
T  15168322 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtacaagatgttgcaagcattattagatgaattactattgatcatt 15168421  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||    
T  15168422 aatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaaatcagtttcctaact 15168500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 2959974 - 2960137
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  2959974 atcatcaaatatgtttgcatgttaaagatgccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 2960073  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||    
T  2960074 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 2960137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 37451511 - 37451682
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  37451511 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 37451610  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| |||||||||||||||||||    
T  37451611 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttcaaaaaagtcaattt 37451682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 34012332 - 34012135
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||    
T  34012332 atcatcaaatctgtttgcatgttaaagatgccaacgataaaatagtatatgtaagttcaagatgttgcaagcattactatatgaattactattgatcatt 34012233  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccat 209  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||| |||||||||| ||| || ||| ||  || |||||||||||    
T  34012232 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctcccat 34012135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 8222354 - 8222528
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  8222354 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatt-atattgatcatt 8222452  T
Q  112 aatcagcaatcaacaatttaaaaatg-aaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||| || | |||||||| |||||||||||| ||||||||||||||| ||||||    
T  8222453 aatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagttttct 8222528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 32216281 - 32216476
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||| |||||||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  32216281 atcataaactctgtttgcatgttaaagattccaacgataaaataatatttgtaagtccaagatgttgcaagcattattagatgaattactattgatcatt 32216380  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||| |||||| ||| ||  || |||||||||    
T  32216381 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttttctgactgcaccgtagaagctccc 32216476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 48353768 - 48353931
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  48353768 atcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtccaagatattgcaagcattactagatgaattattattgatcatt 48353867  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  48353868 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaa 48353931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 16415872 - 16416022
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  16415872 atcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcatt 16415971  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||    
T  16415972 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 16416022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 19899719 - 19899521
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||| ||||| | |||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  19899719 atcaccaactctatttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatatactattgatcat 19899620  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccat 209  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||| ||||||||||| ||| |||||| || ||| |||||||||||    
T  19899619 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttccaaaaaagtcagtttcctaactgcactgtagaagctcccat 19899521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 27563854 - 27563692
Alignment:
Q  13 tcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatta 112  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27563854 tcatcaactctgtttgcatgttaaagatgcaaacgataaaatagtatatgtaagtccaagatgttgcaagtattactagatgaattaatattgatcatta 27563755  T
Q  113 atcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||| ||||||||||||||||| ||| | ||||||||||||| ||||||| ||| |||||||    
T  27563754 atcagtaatcaacaatttaaaaaagaatcaaacattaagatcataattaacttttccaaaaaa 27563692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 28564733 - 28564562
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| ||||| || ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  28564733 atcatcaactctgtttgcatgttaaagatttcaacgataaaataatacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 28564634  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||  ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||    
T  28564633 aatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaattt 28564562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 10922953 - 10923127
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |  || || ||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  10922953 atcatcaactctgtttgcatgttaaagattctgacaataaaatagtatctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcatt 10923052  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||| ||||||    
T  10923053 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaagagtcagttttct 10923127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 27227435 - 27227273
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  27227435 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 27227336  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaa 174  Q
    |||||| ||||||| |||||||||||||   |||||||| |||||||||||| ||| ||||||    
T  27227335 aatcagtaatcaaccatttaaaaatgaattaaacattaatatcaaaattaacttttccaaaaa 27227273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 15383159 - 15383331
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||  ||||| |||||||| |||||||||||||||||||||||| ||||||| |||    
T  15383159 atcatcaactatgtatgcatgttaaagattccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattatt 15383258  T
Q  112 aatcagcaatcaacaatttaaaaatg-aaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||||||||||||||||||||||| || | |||||||| |||||||||||| ||||||||||| |||||||    
T  15383259 aatcagcaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaattt 15383331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 7079013 - 7078850
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||    
T  7079013 atcaacaactctgtttgcatgttaaagatgccaacgataaaatagtatatgtaagtctaagatattgcaaacattactagatgaattactattgatcatt 7078914  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||  ||||||||||||||||||||| | | ||||||||| ||||||||| |||||||||||    
T  7078913 aatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaa 7078850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 11742318 - 11742155
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | |||| |||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  11742318 atcagcaactctctttgtatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 11742219  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  11742218 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaa 11742155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 46931635 - 46931834
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | ||||||||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  46931635 atcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatattattgatcat 46931734  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatt 210  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||| ||| || ||| ||  || ||||||||||||    
T  46931735 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttccttactgcaccgtagaagctcccatt 46931834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 47279415 - 47279578
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| |||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| |||||| ||||| ||||||||||| |||||||||||    
T  47279415 atcaacaactatgtttgcatgttaaagatgccaacaataaaatagtatctgtaagtccaagatgttgcaaacattattagatgaattactattgatcatt 47279514  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||| || ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  47279515 aattagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaa 47279578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 25160858 - 25161015
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  25160858 atcatcaactttgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactatatgaattactattgatcatt 25160957  T
Q  112 aatcagcaatcaacaatttaaaaatg-aaccgaacattaagatcaaaattaacctttt 168  Q
    |||||| ||||||||||||||||||| || | |||||||| |||||||||||||||||    
T  25160958 aatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaacctttt 25161015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 23 - 212
Target Start/End: Complemental strand, 27532920 - 27532732
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  27532920 tgtttgcaagttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 27532821  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccattaa 212  Q
    ||||| ||||||||||| | ||||||||||| ||||||||| ||||||||||| ||| |||  | ||| ||  || ||||||||||||||    
T  27532820 aacaa-ttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctcccattaa 27532732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 30254651 - 30254816
Alignment:
Q  14 catcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaa 113  Q
    |||||||| |||||||||||||||||| |||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  30254651 catcaactctgtttgcatgttaaagattccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaattactattgattattaa 30254750  T
Q  114 tcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||  ||||||||||||||||||||| | |||||||| |||||||||||| |||| ||||||||||    
T  30254751 tcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtca 30254816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 40885039 - 40885216
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  40885039 atcatcaactatgtttgcatgttaaagatgccgatgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 40885138  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaa-ttaaccttttcaaaaaagtcaattttctaa 188  Q
    ||| ||||||||| |||| ||||||||| |||| |||||| | |||| ||||| |||| |||||||||||||||||||    
T  40885139 aattagcaatcaataattcaaaaatgaatcgaatattaaggttaaaagttaacatttttaaaaaagtcaattttctaa 40885216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 51129085 - 51129254
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  51129085 atcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 51129184  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |  ||||| ||  |||||||| |||||||||||||||||||    
T  51129185 aatcagtaatcaacaatttaaaaatgaatcaagtattaaaat--aaattaactttttcaaaaaagtcaattt 51129254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 238463 - 238300
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| |||| |||||     
T  238463 atcatcaactatgtttgtatgttaaagatgccaacgataaaataatatctgtaagtccaagatgttgcaagcattactagatgaattactattaatcatg 238364  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| |||| |||||||||||||||| | ||||||||||| ||||| ||| |||||||||||    
T  238363 aatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatcaactttttcaaaaaa 238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 3535149 - 3535312
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||  | |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  3535149 atcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacctttaagtccaagatgttgcaagcattactagatgaattactattgatcatt 3535248  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||| |||||||||||||||||||||| | ||||||||||| |||| |||| |||| ||||||    
T  3535249 aatcaacaatcaacaatttaaaaatgaatcaaacattaagattaaaactaactttttaaaaaaa 3535312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 32267260 - 32267431
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||| || ||||| || ||||||||  |||| ||||||||| |||||||||||||||||||||||| |||||| ||||    
T  32267260 atcatcaactttgtttgcatgttaaatattccaactataaaatagtacctgtaggtccaagatgttgcaagcattactagatgaattactattgaacatt 32267359  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||    
T  32267360 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttcaaaaaagtcaattt 32267431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 27763258 - 27763089
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcattaa 113  Q
    ||||||| | |||||||||||||||| |||||||| ||||||||| ||||||| |||||| |||||||||||||||||| ||| || |||||||||||||    
T  27763258 atcaactctatttgcatgttaaagattccaacgataaaatagtatctgtaagttcaagatgttgcaagcattactagataaatatactattgatcattaa 27763159  T
Q  114 tcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||| ||||||||    
T  27763158 tcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaatgtcaattt 27763089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 1547516 - 1547664
Alignment:
Q  31 tgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaattt 130  Q
    |||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  1547516 tgttaaagataccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaattt 1547615  T
Q  131 aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||| | ||||||||||| ||||||||  |||||||||||||||    
T  1547616 aaaaatgaatcaaacattaagattaaaattaattttttcaaaaaagtca 1547664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 9903004 - 9902836
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||| ||||||| ||||||||   |||||||||||||  |||||||| |||||||||||||| |||||||||||    
T  9903004 atcatcaaatttgtttgcatgttaaagatgacaacgataaaatagtaccagtaagtccaagatgctgcaagcactactagatgaattactattgatcatt 9902905  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaa 180  Q
    |||||| ||||||||||||||||||||| | || ||||| |||||||||||| ||||||||||||||||    
T  9902904 aatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaagtcaa 9902836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 23999573 - 23999745
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | ||||||||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  23999573 atcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcat 23999672  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||| ||||| ||||||||    
T  23999673 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaggtcaattt 23999745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 27267150 - 27266984
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||| |||    
T  27267150 atcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgataatt 27267051  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||  |||||| ||||||||||||||   |||||||||||||||||||| |||||| |||||||||    
T  27267050 aatcaataatcaataatttaaaaatgaattaaacattaagatcaaaattaa-cttttccaaaaagtca 27266984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 47682444 - 47682277
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||  ||||| |||||||| ||||||||||||||| |||||||| |||||||||||    
T  47682444 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacctgtaaatccaagatgttgcaagcattactaaatgaattactattgatcatt 47682345  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||| ||||||||||||| |||   ||||||||||| ||||||||| | |||||||||||||    
T  47682344 aatcagtaattaacaatttaaaaaagaattaaacattaagattaaaattaacttgttcaaaaaagtca 47682277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 31621504 - 31621331
Alignment:
Q  12 atcatcaactatgtttgcatgttaa-----agatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattga 106  Q
    |||| ||||||||||||||||||||     ||||||||||||| |||||||| |||||||| ||| || |||||||||||| |||||||| || ||||||    
T  31621504 atcaacaactatgtttgcatgttaagttaaagatgccaacgataaaatagtacatgtaagttcaatatgttgcaagcattagtagatgaactactattga 31621405  T
Q  107 tcattaatcagcaatcaacaattta-aaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  31621404 tcattaatcatcaatcaacaatttaaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtca 31621331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 21289829 - 21290004
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| ||||||||| ||||||||||||||||| |||||  |  | |||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  21289829 atcaactctgtttgcatattaaagatgccaacgataaaataacacttataagtccaagatgttgcaaacattactagatgaattattattgatcattaat 21289928  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    ||| ||||||||||||||||||||| | ||||||||||||||||||||  |||  |||||||||| |||| |||||    
T  21289929 cagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttctaaaaaagtcagttttttaact 21290004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 38823440 - 38823607
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||| ||||||||||||| ||||| ||  |||||||| || || |||||||||||||||||||||||| |||||||||||    
T  38823440 atcagcaactctgtttgcatgttagagatgccaacgataaaataatacctgtaagtctaaaatgttgcaagcattactagatgaattactattgatcatt 38823539  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | || |||||||| ||||||||| |||| ||||||||||    
T  38823540 aatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaacttttttaaaaaagtca 38823607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 1359885 - 1359740
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||| ||| || |||||||||||||| ||||||||| ||| |||||||    
T  1359885 atcatcaactatgtttgcatgttaaagattccaacgataaaatagtacctgtaagttcaaaatgttgcaagcattactggatgaattactatcgatcatt 1359786  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaa 157  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||    
T  1359785 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaa 1359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 3309379 - 3309538
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||| |||||||||||||||||||| ||||||||   ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  3309379 atcagcaactctgtttgtatgttaaagatgccaacgataaaatagtacccgtaagtccaagatattgcaagcattactagatgaattactattgatcatt 3309478  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaaga-tcaaaattaaccttttca 170  Q
    |||||| ||||||||||||||||||||| | |||||| ||| | ||||||||| ||||||    
T  3309479 aatcagtaatcaacaatttaaaaatgaatcaaacatttagatttaaaattaactttttca 3309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 4330507 - 4330670
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | ||||||||||||||||| ||| ||| ||||||||  ||||||||||| || ||||||||||||||||||||||||  ||||||||||    
T  4330507 atcatcaactctttttgcatgttaaagatgtcaaagataaaatagtacttgtaagtccaatatgttgcaagcattactagatgaattacaattgatcatt 4330606  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| |||||||||| |||||||||| | ||||||||||||||||||||  ||| |||||||    
T  4330607 aatcagtaatcaacaatataaaaatgaatcaaacattaagatcaaaattaatttttccaaaaaa 4330670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 28769879 - 28770050
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||| || ||||||||||||||||||  ||||||| ||||||||  |||||||||||||| |||||| |||| |||||||||||| |||||||||||    
T  28769879 atcatcacctctgtttgcatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaaacattgctagatgaattactattgatcatt 28769978  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||| |  ||||||||||||||||||||| | |||||||| || ||||||||| ||||||||||| |||||||    
T  28769979 aattaataatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaattt 28770050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 30326902 - 30326775
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| || || |||||||||||| |||||||||||||||||||||||| ||||||||||     
T  30326902 atcatcaactatgtttgcatgttaaagattccaacgataaaataatacatttaagtccaagatgttgcaagcattactagatgaattactattgatcatc 30326803  T
Q  112 aatcagcaatcaacaatttaaaaatgaa 139  Q
    |||||| |||||||||||||||||||||    
T  30326802 aatcagtaatcaacaatttaaaaatgaa 30326775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 39393615 - 39393781
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatca 116  Q
    ||||| ||||| ||||||||||||||||| ||| ||||||||   |||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  39393615 caactctgtttccatgttaaagatgccaatgataaaatagtaccggtaaatccaagatgttgcaaacattactagatgaattactattgatcattaatca 39393714  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    | |||||||||||||||||||||   |||||||| || ||||||||| |||| ||||||||||||||    
T  39393715 gtaatcaacaatttaaaaatgaataaaacattaaaattaaaattaacttttttaaaaaagtcaattt 39393781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 15752255 - 15752458
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||| ||||||||||||||| || |||||||  ||||| || ||||||||||||||  ||||||   ||||||||||||||| |||||||||||    
T  15752255 atcattaactctgtttgcatgttaaaaattccaacgacaaaataatacatgtaagtccaagaagttgcaatttttactagatgaattactattgatcatt 15752354  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatta 211  Q
    |||||| |||||||||||||||||||||   ||||||||||||||||||||  ||||  ||||| |||||||||| ||| ||  || ||||||||||| |    
T  15752355 aatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttttaaaaaatcaattttctgactgcaccgtagaagctcccataa 15752454  T
Q  212 atta 215  Q
    ||||    
T  15752455 atta 15752458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 22170937 - 22171135
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||| ||||||| ||||| |   |||||||| ||||| |||||| ||||| ||||| ||||| |||||||||||    
T  22170937 atcatcaaatctgtttgcatgttaaagatgtcaacgataaaataattcttgtaagtctaagatgttgcaaacattattagataaattactattgatcatt 22171036  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatt 210  Q
    ||| || |||||||||||||||||| || | |||||||| |||||||||||| ||||||||||| ||| |||||||| | ||  || ||||||||||||    
T  22171037 aattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctaattgcaccgtagaagctcccatt 22171135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 10181958 - 10181792
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatat-gtaagtccaagattttgcaagcattactagatgaattaatattgatcat 110  Q
    |||||||||| || ||| |||||||||||| |||| ||  |||||||  | |||||||||| || |||||||||||||||||||||||| |||||| |||    
T  10181958 atcatcaactctggttgtatgttaaagatgacaacaatacaatagtaccttgtaagtccaaaatgttgcaagcattactagatgaattactattgaacat 10181859  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    |||||| |||||||||||||||||||||| | ||||||||||||| ||||||| ||| |||||||||    
T  10181858 taatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagt 10181792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 37618851 - 37618729
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  37618851 atcatcaactctgtttgcatgttaaagattccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaattagtattgaccatt 37618752  T
Q  112 aatcagcaatcaacaatttaaaa 134  Q
    |||||  ||||||||||||||||    
T  37618751 aatcaataatcaacaatttaaaa 37618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 42721265 - 42721435
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||   ||||||| ||||| || ||||||||||||||| ||||||  |||||||||| ||||| |||||||||||    
T  42721265 atcatcaactttgtttgcatgttaaaga---caacgataaaatattacatgtaagtccaagatgttgcaattattactagattaattactattgatcatt 42721361  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| || |||||| |||||||||||||| | |||||||| |||| ||||||| |||| |||||| ||||||||||    
T  42721362 aatgagtaatcaataatttaaaaatgaatcaaacattaaaatcataattaacttttttaaaaaa-tcaattttct 42721435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 31962851 - 31963010
Alignment:
Q  21 tatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaa 120  Q
    |||||||||||||||||||   ||||||| ||||| |||||||||||  ||||| |||||||||||| |||||||| || ||||||||||||||| | ||    
T  31962851 tatgtttgcatgttaaagaaatcaacgataaaataatatatgtaagtttaagatgttgcaagcattattagatgaactactattgatcattaatcggtaa 31962950  T
Q  121 tcaacaa-tttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||| ||||||||| || | ||||||||||| ||||||||| |||||||||||||||    
T  31962951 tcaacaattttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtca 31963010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 41926383 - 41926532
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||  |||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  41926383 atcatcaactctgtttgcatgttaaagatgccaacaataaaatagtacttgtaagtccaagatatt-caagcattactagatgaattactattgatcatt 41926481  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    ||| |  ||||||  |||||||| |||| | |||||||| |||| ||||||    
T  41926482 aattaataatcaatgatttaaaattgaatcaaacattaaaatcataattaa 41926532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 33725550 - 33725398
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||| || |||||| ||||||||            |||||||||    
T  33725550 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagaccaaaatgttgcaaacattacta------------ttgatcatt 33725463  T
Q  112 aatcagcaatcaacaatttaaaaa-tgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| |||||||||||    
T  33725462 aatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaactttttcaaaaaa 33725398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 18422889 - 18422986
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaat 121  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||    
T  18422889 gtttgcatgttaaagattccaacgataaaaaagcacatgtaagtccaagatgttgcaagcattgctagatgaattactattgatcattaatcaacaat 18422986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 38759759 - 38759847
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaa 100  Q
    |||| |||||||||||||||||||||| || |||| || ||||| ||||||||| |||||||| |||||||||||||||||| ||||||    
T  38759759 atcaccaactatgtttgcatgttaaaggtgtcaactataaaataatatatgtaactccaagatgttgcaagcattactagattaattaa 38759847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 48620922 - 48620982
Alignment:
Q  119 aatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||| |||||||| | ||||||||||| ||||||||| |||||| ||||||||    
T  48620922 aatcaacaattttaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtca 48620982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 435
Target Start/End: Original strand, 26973807 - 26973889
Alignment:
Q  353 acccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttccaatagggatatttttcggaaaggacattgat 435  Q
    ||||| ||||||||||| || |||||||||||||||||| | ||||  |||||||| ||||||||| | | || |||||||||    
T  26973807 acccagtcatggcaagctagcatgaaatgatcagctccaaggcttctattccaatatggatattttccagcaatgacattgat 26973889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 38759847 - 38759883
Alignment:
Q  143 aacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||||||||||||||| |||||||||||||||    
T  38759847 aacattaagatcaaaattaactttttcaaaaaagtca 38759883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 48620854 - 48620900
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagta 58  Q
    |||| ||||| ||||||||||||||||||||||||||  ||||||||    
T  48620854 atcagcaactctgtttgcatgttaaagatgccaacgaataaatagta 48620900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 9e-71; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 28002967 - 28002772
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||| | ||||||||||||||||| |||||||||||    
T  28002967 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgctaacattactagatgaattactattgatcatt 28002868  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| || ||| |||||| |||||||||    
T  28002867 aatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttcctgactgcagtgtagaagctccc 28002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 33816497 - 33816330
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  33816497 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagttcatgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 33816398  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  33816397 aatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtca 33816330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 32579676 - 32579854
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  32579676 atcatcaactatgtttgcatgttaaaaatgtcaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 32579775  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  32579776 aatcagcaatcaacaatttaaaaataaatcaaacattaagatcaaaattaattttttcaaaaaagtcagttttctaact 32579854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 36493670 - 36493499
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||||||| ||||||||| |||||||||||    
T  36493670 atcatcaactctgtttgcatgttaaagatgccaacgataaaatagtatctgtaagtctaagatattgcaagcattactcgatgaattactattgatcatt 36493571  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||| | ||| ||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||||||    
T  36493570 aatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtcaattt 36493499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 19440629 - 19440432
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19440629 atcatcaactctgtttgcatgttaaagattccaatgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 19440530  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccat 209  Q
    |||||| |||||| ||||||||||| || | ||||||||||||||||||||| |||| |||||||||| ||| || ||| ||  || |||||||||||    
T  19440529 aatcagtaatcaataatttaaaaattaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctcccat 19440432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 6864265 - 6864461
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| ||||| ||| ||||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  6864265 atcatcaactttgtttgcatgttaaagattacaacgataaaataatatttgtaagttcaagatgttgcaagcattactagatgaattactattgatcatt 6864364  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    |||||  ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||| |||||| ||| ||  || ||||||||||    
T  6864365 aatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctccca 6864461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 7152187 - 7152011
Alignment:
Q  10 acatcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatca 109  Q
    |||||||||||| ||||||||||||||| ||| ||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  7152187 acatcatcaactctgtttgcatgttaaatatgtcaacgataaaatagtacctgtaagtccaagattttgcaagcattattagatgaattactattgatca 7152088  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||||  ||||||||||||||||||||| | ||||||||||| |||| |||| ||||||||||||||| ||||||    
T  7152087 ttaatcaataatcaacaatttaaaaatgaatcaaacattaagatgaaaaataactttttcaaaaaagtcagttttct 7152011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 12 - 216
Target Start/End: Complemental strand, 30002622 - 30002418
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| |||||||| || |||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  30002622 atcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatttaagtctaagatgttgcaagcattactagatgaattactattgatcatt 30002523  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatta 211  Q
    |||||| ||| ||||||||||||||||| | ||||||||||| ||||||||| |||||| ||||||||||||  ||||| ||  || ||||||||||| |    
T  30002522 aatcagtaataaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcaatttcataactgcaccgtagaagctcccataa 30002423  T
Q  212 attaa 216  Q
    |||||    
T  30002422 attaa 30002418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 3042849 - 3043020
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||| ||||||||||  ||||||| |||||||| |||||||||||| || |||||||||||||||||||||||| ||||||| |||    
T  3042849 atcatcaactttgtttgcttgttaaagatttcaacgataaaatagtacatgtaagtccaacatgttgcaagcattactagatgaattagtattgattatt 3042948  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||    
T  3042949 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaattt 3043020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 25184346 - 25184517
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| ||||||||||||||| || || || || |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  25184346 atcaactctgtttgcatgttaaaaattccgacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 25184445  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| |||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||    
T  25184446 cagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttct 25184517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 37775888 - 37776059
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||| |||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  37775888 atcagcaactttgtttgcatgttaaagataccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 37775987  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||||||  |||||||| |||| ||||||||||||||    
T  37775988 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattgaaattaacttttttaaaaaagtcaattt 37776059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 50764950 - 50765115
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| |||||||||||||| |||||||||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  50764950 atcagcaactatgtttgcaagttaaagatgtcaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 50765049  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||| ||||||||    
T  50765050 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttttaaaaaagt 50765115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 7703739 - 7703906
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||| |||||||||||||||||| ||||||||  |||||||| ||||| |||||||||||||||||||||||| |||| ||||||    
T  7703739 atcagcaactctgtttgcacgttaaagatgccaacgataaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactatttatcatt 7703838  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  7703839 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 7703906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 33341628 - 33341795
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  33341628 atcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattactattgatcatt 33341727  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||  |||| ||||||||||    
T  33341728 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaatttttttaaaaaagtca 33341795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 39400238 - 39400405
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| |||| |||  | ||||| |||||| |||||||||||||||||||||| | |||||||||||    
T  39400238 atcagcaactctgtttgcatgttaaagatgccaacgataaaatggtacctttaagttcaagatgttgcaagcattactagatgaatgactattgatcatt 39400337  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  39400338 aatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 39400405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 47253970 - 47254137
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||||||||| || |||||||| ||| ||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  47253970 atcagcaactctgtttgcatgttaaagatgccaacaataaaatagtacatgcaagtctaagatgttgcaagcattactagatgaattactattgatcatt 47254069  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | | ||||||||| ||||||||| |||||||||||||||    
T  47254070 aatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtca 47254137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 35021016 - 35020817
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaatta----atattgat 107  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||| |||||||||||||||||    ||||||||    
T  35021016 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtatctgtaagtccaagatattgcaaacattactagatgaattactatatattgat 35020917  T
Q  108 cattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||||| | ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||| ||||| |||||| ||| ||  || |||||||||    
T  35020916 cattaatcggtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaagagtcagttttctgactacaccgtagaagctccc 35020817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 25701039 - 25700859
Alignment:
Q  10 acatcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatca 109  Q
    |||||||||||| ||||||||||||||||| | ||||||| |||||||||  |||| || |||||||||||||||||  ||||||||||| |||||||||    
T  25701039 acatcatcaactttgtttgcatgttaaagaagtcaacgataaaatagtatccgtaaatctaagattttgcaagcattgttagatgaattactattgatca 25700940  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||||  |||  |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25700939 ttaatcaataatgtacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcaatttcctaact 25700859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 34361473 - 34361305
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | |||||||||||||||| |||||||| ||||||||  | |||||||||||| |||||||||||||||||||||| || ||||||||||    
T  34361473 atcatcaactctatttgcatgttaaagattccaacgataaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcat 34361374  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  34361373 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 34361305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 49376197 - 49376364
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||||||||||  ||| ||||||||||| |||||||| |||||||||||    
T  49376197 atcatcaactttgtttggatgttaaagatgtcaacgataaaatagtacatgtaagtccaagaagttgaaagcattactaaatgaattactattgatcatt 49376296  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||| ||||||||||||||   ||||||||||||||||||||| |||||||||||||||    
T  49376297 aatcagtaatcaagaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtca 49376364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 879529 - 879355
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |  || || ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  879529 atcatcaactttgtttgcatgttaaagattctgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattattattgatcatt 879430  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||||  ||||||||| ||||||    
T  879429 aataagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttttaaaaagtcagttttct 879355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 1815531 - 1815704
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | |||||||||||||||| |||||||| ||||||||  ||||| |||||||| |||||| |||||||||||||||||  ||||||||||    
T  1815531 atcatcaactctatttgcatgttaaagattccaacgataaaatagtacctgtaaatccaagatgttgcaaacattactagatgaattacaattgatcatt 1815630  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||  ||||||||||||||||    
T  1815631 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa-cttttttaaaaagtcaattttct 1815704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 178
Target Start/End: Complemental strand, 5047947 - 5047781
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||  ||||||||| ||||| ||||||||| |    
T  5047947 atcataaactatgtttgcatgttaaagatgccaacaataaaatagtacatgtaagtccaagatgttgcaagttttactagataaattattattgatcagt 5047848  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtc 178  Q
    ||||| |||| ||||||||||||||||| |||||||||| |||||||||||  ||||||||||||||    
T  5047847 aatcaacaataaacaatttaaaaatgaatcgaacattaaaatcaaaattaattttttcaaaaaagtc 5047781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 55241081 - 55240919
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatca 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||| |||||||||||    
T  55241081 caactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagataaattactattaatcattaatca 55240982  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
      ||||||||||||||||||||| | ||||||||||| ||||||||  |||||||||||||||    
T  55240981 ataatcaacaatttaaaaatgaatcaaacattaagattaaaattaaatttttcaaaaaagtca 55240919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 55477872 - 55477722
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| || |||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  55477872 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatttaagtccaagatgttgcaagcattactagatgaattactattaatcatt 55477773  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    |||||| ||| ||||||||||||||||| | ||||||||||||||||||||    
T  55477772 aatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaa 55477722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 19089434 - 19089237
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||  |||| |||||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19089434 atcatcaacgttgttcgcatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 19089335  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccat 209  Q
    |||||| ||||||||||||||||||||| | | | |||| |||||||||||| || |||||||||||||||| || ||| ||  || |||||||||||    
T  19089334 aatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctcccat 19089237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 37287958 - 37288126
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  37287958 atcagcaactttgtttgcatgttgaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgagcatt 37288057  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaaga-tcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||| |||||||||||||| | |||||||||| | ||||||||| |||||||||||||||    
T  37288058 aatcagtaatcaataatttaaaaatgaatcaaacattaagatttaaaattaactttttcaaaaaagtca 37288126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 23761301 - 23761468
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||| ||||||||| |||||||| |||| |||  | |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  23761301 atcagcaactctgtttgcacgttaaagataccaacgataaaattgtacctataagtccaagatgttgcaagcattactagatgaattattattgatcatt 23761400  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||| |||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  23761401 aatcagtaatcaataatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 23761468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 34948076 - 34947925
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||| || |||||||| ||    
T  34948076 atcaacaactctgtttgcatgttaaagatgccaacgataaaataatacatgtaagtccaagatgttgcaagcattactagatgaaatactattgatcgtt 34947977  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaac 163  Q
    |||||| ||||||||||||||||||||| | ||||||||||| |||||||||    
T  34947976 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaac 34947925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 37663722 - 37663551
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||  |||| ||||||||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  37663722 atcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 37663623  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | | | |||| |||||||||||| || | ||||||||||||||    
T  37663622 aatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttattaaaaaagtcaattt 37663551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 46888127 - 46887972
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatca 123  Q
    |||||||||||||||||||||||||| ||||||||  ||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||  |||||    
T  46888127 gtttgcatgttaaagatgccaacgataaaatagtacctgtaaatccaagatgttacaagcattactagatgaattactattgatcattaatcactaatca 46888028  T
Q  124 acaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||| | || ||||| |||||||||||| |||||||||||||||    
T  46888027 acaatttaaaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaagtca 46887972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 4205216 - 4205381
Alignment:
Q  14 catcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaa 113  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||| |||| ||||| ||    
T  4205216 catcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcatcactagatgaattactatttatcatgaa 4205315  T
Q  114 tcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    | || |||||| |||||||||||||| | |||||||| || |||| |||| |||||||||||||||    
T  4205316 taagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaactttttcaaaaaagtca 4205381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 4598212 - 4598379
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||| || || ||| |||||||| |||||||||||| ||||| ||||| |||||||||||    
T  4598212 atcagcaactctgttttcatgttaaagatgccaacgataaaataatacatttaaatccaagatgttgcaagcattattagattaattactattgatcatt 4598311  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||||  |||||||||    
T  4598312 aatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttacaaaaagtca 4598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 29584181 - 29584010
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||||||||||||  |||| || |||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  29584181 atcagcaactctatttgcatgttaaagatttcaacaataaaatggtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 29584082  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||| ||| ||||||||||||| | ||||||||||| ||||||||| |||||||| ||||||||||    
T  29584081 aatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaacaagtcaattt 29584010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 32592319 - 32592486
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatca 116  Q
    ||||| ||||||||||||||||||| | ||||| ||||||||  ||||||| |||||| ||| ||||||||||| |||||||| |||||||| |||||||    
T  32592319 caactttgtttgcatgttaaagatgtctacgataaaatagtacctgtaagttcaagatgttgaaagcattactaaatgaattactattgatcgttaatca 32592418  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaatttt 184  Q
      ||||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||    
T  32592419 ataatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcaatttt 32592486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 35025515 - 35025381
Alignment:
Q  44 aacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccga 143  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |    
T  35025515 aacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaa 35025416  T
Q  144 acattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||| |||||||||||| |||||| ||||||||    
T  35025415 acattaa-atcaaaattaactttttcataaaagtca 35025381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 32912561 - 32912393
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | |||| |||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  32912561 atcatcaactctatttgtatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcat 32912462  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||| ||  |||||||||||||||    
T  32912461 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatgaattttttcaaaaaagtca 32912393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 50697471 - 50697639
Alignment:
Q  12 atcatcaactatgtttgca-tgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcat 110  Q
    |||||||||| |||||||| |||||||||| |||||||| ||||||||  ||||| |||||||| ||| |||||||||||||||||||| ||||||||||    
T  50697471 atcatcaactctgtttgcaatgttaaagattccaacgataaaatagtacctgtaattccaagatgttgtaagcattactagatgaattactattgatcat 50697570  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||| || ||||||||||||||||||||| | |||||||| || ||||||||  |||||||||||||||    
T  50697571 taattagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaattttttcaaaaaagtca 50697639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 17167943 - 17168110
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||||||| |||| ||||||    
T  17167943 atcatcaactctatttgcatgttaaagatgccaacgataaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcatt 17168042  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || |||||| |||||||||||||| | |||||||| || |||| |||  |||||||||||||||    
T  17168043 aattagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaagtca 17168110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 17173520 - 17173687
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||| ||||||||||||| |||| |||||     
T  17173520 atcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcatg 17173619  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || |||||| |||||||||||||| | |||||||| || |||| |||  |||||||||||||||    
T  17173620 aataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaagtca 17173687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 17272194 - 17272365
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||| ||||||||  |||| || |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  17272194 atcagcaactctatttgcatattaaagatttcaacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 17272293  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||| | ||| ||| ||||||||||||| | ||||||||||| ||||||||| |||||||| ||||||||||    
T  17272294 aatcggtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaataagtcaattt 17272365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 9139465 - 9139624
Alignment:
Q  18 aactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcag 117  Q
    |||| ||||||||||||||||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||     
T  9139465 aactctgtttgcatgttaaagatgccaacgataacgtagtacatgtaagtccaagatgttgcaagcattactagacgaattactattgatcattaatcaa 9139564  T
Q  118 caatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
     ||||   |||||||||||||| | ||||||||||||| ||||||| ||| |||||||||||    
T  9139565 taatc--taatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagtca 9139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 26896330 - 26896489
Alignment:
Q  25 tttgcatgttaaagatgccaacgatgaaatagtatatgtaagtcc-aagattttgcaagcattactagatgaat-taatattgatcattaatcagcaatc 122  Q
    ||||||||||||| ||  ||||||| ||||||||  ||||||||| || || |||||| ||||||||||||||| || ||||||||||||||||| ||||    
T  26896330 tttgcatgttaaa-atttcaacgataaaatagtacttgtaagtccgaaaatgttgcaaacattactagatgaatatactattgatcattaatcagtaatc 26896428  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||    
T  26896429 aacaatttaaaaatgaatcgaacattaaaatcaaaattaacttttttaaaaaagtcaattt 26896489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 23431834 - 23431952
Alignment:
Q  61 tgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaatt 160  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||| | | |||||||| || ||||||    
T  23431834 tgtaagtccaagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaattaaaatt 23431933  T
Q  161 aaccttttcaaaaaagtca 179  Q
    ||| |||||||||||||||    
T  23431934 aactttttcaaaaaagtca 23431952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 27396857 - 27397000
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||| ||||||| || | |||  | ||||||||| || |||||||||||||||||||||||| ||||||||||||||  | ||||    
T  27396857 tgtttgcatgttaaagatgtcaacgataaagtggtacctataagtccaaaatgttgcaagcattactagatgaattactattgatcattaat--gtaatc 27396954  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaacctttt 168  Q
    ||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  27396955 aacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 27397000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 46884080 - 46883932
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||| || |||| ||| |||||||||  ||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  46884080 tgtttgcatgttaaaaattccaaagataaaatagtat--gtaagtcc--gatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 46883985  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||||||||||| || | |||||||| || ||||||||  |||||||||||    
T  46883984 aacaatttaaaaataaatcaaacattaaaataaaaattaattttttcaaaaaa 46883932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 38012568 - 38012655
Alignment:
Q  88 ctagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  38012568 ctagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaa 38012655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 42199959 - 42200131
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatat-gtaagtccaagattttgcaagcattactagatgaat-taatattgatca 109  Q
    ||||| |||| | |||||||||||||||| |||||||| ||||| ||  | ||||||||||||| |||||||||||||||||||||| || || || |||    
T  42199959 atcataaactctatttgcatgttaaagattccaacgataaaataataccttgtaagtccaagatgttgcaagcattactagatgaatatactactgttca 42200058  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||||| |||||| ||||||||||| || | ||||| || ||| |||||||| |||||||||| ||||||||    
T  42200059 ttaatcagtaatcaataatttaaaaattaatcaaacatcaaaatc-aaattaactttttcaaaaaggtcaattt 42200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 38012084 - 38012169
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat 97  Q
    ||||||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||| ||||||  ||||||||||||||    
T  38012084 atcatcaactatgtttgcacgttaaaaatgccaacaataaaatagtacatgtaagtccaagatgttgcaaatattactagatgaat 38012169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 4934183 - 4934026
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||  |           || ||||| |||||| ||||||||||  |||| ||||||    
T  4934183 atcatcaactatgtttgcatgttaaagatgacaacgataaaatagtacct-----------atgttgcacgcattaatagatgaatttctattaatcatt 4934095  T
Q  112 aatcagcaatcaacaattt-aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||| ||||| |||||| ||   ||||||||||||||||||||| | |||||||||||||    
T  4934094 aatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaacttgttcaaaaaagtca 4934026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 35025577 - 35025531
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagta 58  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  35025577 atcatcaactatgtttgcatgttaaagatgccaacgataaaatagta 35025531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 56050171 - 56050234
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcatt 86  Q
    |||||||||||||||||   ||||||| ||||||||  |||||||||||||| |||||||||||    
T  56050171 tgtttgcatgttaaagacttcaacgataaaatagtacctgtaagtccaagatgttgcaagcatt 56050234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 4e-70; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 41465731 - 41465909
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||| |||||||| |||||||||||    
T  41465731 atcatcaattatgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaaacattactatatgaattactattgatcatt 41465830  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  41465831 aatcagcaatcaacaatttaaaattgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagttttctaact 41465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 26357818 - 26358002
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  26357818 tgtttgcatgttaaagatgccaacgataaaatagtatttttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 26357917  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    ||||||||||||||||| | |||||||| |||||||||||| |||| ||||||||||||||||||||| || ||| |||||||||    
T  26357918 aacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcaattttctaactgcaatgtagaagctccc 26358002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 18494243 - 18494087
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||| ||||    
T  18494243 tgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatc 18494144  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  18494143 aacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 18494087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 4167152 - 4167347
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||| ||||||||| |||| |||||     
T  4167152 atcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaattactattaatcatg 4167251  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| |||||||||||||||||||||   ||||||||||| ||||||||| |||||||||||||||||||||| ||| ||  || |||||||||    
T  4167252 aatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 4167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 7006911 - 7006744
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  7006911 atcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaatttctattgatcatt 7006812  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||| ||| ||||||||| |||||||||||||||    
T  7006811 aatcagtaatcaacaatttaaaaatgaatcaaacattatgattaaaattaactttttcaaaaaagtca 7006744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 184
Target Start/End: Original strand, 35959126 - 35959294
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||| ||||    ||||||| |||||||||||||||||||||||| |||||||||||    
T  35959126 atcatcaactatgtttgcatgttaaagatttcaacgataaaatagtacatgt----ccaagatgttgcaagcattactagatgaattactattgatcatt 35959221  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaatttt 184  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||    
T  35959222 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaatttt 35959294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 41961082 - 41961266
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatca 123  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||  |||||    
T  41961082 gtttgcatgttaaagatgccaacgataaaataatacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatca 41961181  T
Q  124 acaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    |||||||||||||||| | |||||||| |||||||||||| ||||||||||| ||| ||| || ||| ||  || ||||||||||    
T  41961182 acaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaattcagtttcctgactgcaccgtagaagctccca 41961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 2325351 - 2325156
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||  ||||||| ||||||||  ||||| |||||||| |||||||||||||||||||||||| ||||||| |||    
T  2325351 atcatcaaatttgtttgcatgttaaagattacaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattatt 2325252  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| |||||||||||||||||| || | ||||||||||||||||||||| |||| |||||| |||||||||| ||| ||  || |||||||||    
T  2325251 aatcagtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaactttttaaaaaaaatcaattttctgactgcaccgtagaagctccc 2325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 11366354 - 11366179
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | ||||||||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  11366354 atcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcat 11366255  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||||||| ||||||||||||||||||||| | |||||||| || ||||||||| ||||||||||| ||||||||||    
T  11366254 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaattttct 11366179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 33660350 - 33660183
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||  |||| |||||||||||||||||||||||| |||||||||||    
T  33660350 atcagcaactttgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtctgagatgttgcaagcattactagatgaattactattgatcatt 33660251  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| |||||| ||||||||    
T  33660250 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcagaaaagtca 33660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 43648218 - 43648047
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||| ||||||||||||  ||||||| |||||| |  |||||||||||||| | |||| ||||||||||||||||| |||||||||||    
T  43648218 atcatcaactttgtttccatgttaaagatttcaacgataaaatagcacttgtaagtccaagatgtcgcaaacattactagatgaattactattgatcatt 43648119  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||    
T  43648118 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaattt 43648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 43770821 - 43770654
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||||||||| || ||||||||| | ||||| |||||| |||||||||||||||||||||||  |||||||||||    
T  43770821 atcagcaactctgtttgcatgttaaagatgccaacaataaaatagtatctttaagttcaagatgttgcaagcattactagatgaatttctattgatcatt 43770722  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  43770721 aattagaaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 43770654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 19289296 - 19289118
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||| |||||||||||||| || || || ||||| ||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19289296 atcatcaactctgtgtgcatgttaaagattccgacaataaaataatacctgtaagtccaagatattgcaagcattactagatgaattactattgatcatt 19289197  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||| ||| |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  19289196 aatcagaaattaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtcagtttcctaact 19289118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 44913894 - 44914060
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactag---atgaattaatattgatc 108  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||   |||||||| |||| |||    
T  44913894 atcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagaaaatgaattactattaatc 44913993  T
Q  109 attaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    || |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  44913994 atgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaa 44914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 5881770 - 5881922
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||| |||| || |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  5881770 tgtttgcatgttaaagatgtcaacaataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattattcagtaatc 5881869  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |||||| ||||    
T  5881870 aacaatttaaaaatgaatcaaacattaagattaaaattaactttttcataaaa 5881922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 33709205 - 33709042
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||| ||| ||||||||  ||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  33709205 atcagcaactctgtttgcatgttaaagatgtcaatgataaaatagtacttgtaaatccaagatgttgcaagcattactagatgaattactattgatcatt 33709106  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||  ||||||||||||||||||||| | |||||||| || ||||||||| |||||||||||    
T  33709105 aatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaa 33709042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 39167342 - 39167168
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||||||||  | |||| ||||||||||||||||||| |||| || ||     
T  39167342 atcatcaactctgtttgtatgttaaagatgtcaacgataaaatagtacatgtaagtccaaattgttgctagcattactagatgaattactattaattatg 39167243  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| |||||||||||||||||||||   ||||||||||| ||||||||| ||||||||||||||| ||||||    
T  39167242 aatcagtaatcaacaatttaaaaatgaataaaacattaagattaaaattaactttttcaaaaaagtcagttttct 39167168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 4763861 - 4764017
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | | |||||||||||||||||| |||||| ||||||||  |||||||||||||| |||||||||||||||| ||||||| |||||||||||    
T  4763861 atcatcaattctttttgcatgttaaagatgctaacgataaaatagtacctgtaagtccaagatattgcaagcattactagttgaattactattgatcatt 4763960  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaacctttt 168  Q
    |||||| |||||| |||||||||||||| | |||||||| |||||||||||| ||||    
T  4763961 aatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 4764017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 37905940 - 37906116
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||| |||||||||||||||||| |||| ||| |||||  | ||||||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  37905940 atcattaactctgtttgcatgttaaagattccaatgataaaataacacatgtaagtccaagatgttgcaagaattactggatgaattactattgatcatt 37906039  T
Q  112 aatcagcaatcaacaatttaaaaatg-aaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttcta 187  Q
    |||||| ||| ||||||||||||||| || | |||||||| |||||||||||  |||||||||||||||||||||||    
T  37906040 aatcagtaattaacaatttaaaaatgaaatcaaacattaaaatcaaaattaattttttcaaaaaagtcaattttcta 37906116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 3177169 - 3177336
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||||| || ||||||||||||||||||||| |||| |||||     
T  3177169 atcatcaactatgtttgcatgttaaagatgtcaactataaaatagtacatgtaagtccaagatattacaagcattactagatgaattactatttatcatg 3177268  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || |||||||||||| ||||| || | |||||||| || |||| |||| |||||||||||||||    
T  3177269 aataagtaatcaacaatttgaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaagtca 3177336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 31862082 - 31862249
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | |||||||||||||| ||| || || || ||||||||  |||||||||||||| ||| |  ||||||||||||||||| |||||||||||    
T  31862082 atcatcaagtctgtttgcatgttaaggattccgacaataaaatagtacttgtaagtccaagatattgtagacattactagatgaattactattgatcatt 31862181  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||| ||||||||||||| | || |||||||||||||||||| |||||||||||||||    
T  31862182 aatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaaaagtca 31862249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 19500885 - 19500739
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| | ||| |||||||||||||  |||||| |||||||| |||||| | |||||| |||||||||||||||||||||||| ||||||||||||||    
T  19500885 atcaactctatttacatgttaaagatgttaacgataaaatagtacatgtaatttcaagatgttgcaagcattactagatgaattactattgatcattaat 19500786  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaatta 161  Q
    ||| ||||||||||||||||||||| | || ||||||||||||||||    
T  19500785 cagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaatta 19500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 27349915 - 27349794
Alignment:
Q  18 aactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcag 117  Q
    |||| |||||||| ||||||||| |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  27349915 aactctgtttgcaagttaaagattccaacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcag 27349816  T
Q  118 caatcaacaatttaaaaatgaa 139  Q
     |||||||||||||||||||||    
T  27349815 taatcaacaatttaaaaatgaa 27349794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 31570707 - 31570514
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||||  |||||||  ||||| ||||||||||| |||||||||||| |||||||||||    
T  31570707 atcaacaactctgtttacatgttaaagatgccaacgataaaatagtacttgtaagtttaagatgttgcaagcattgctagatgaattactattgatcatt 31570608  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctc 205  Q
    |||||| ||||||  ||||||||||||| | | |||||| || ||||||||| |||| |||||||||| |||  | ||| |||||| |||||||    
T  31570607 aatcagtaatcaaatatttaaaaatgaatcaatcattaaaatgaaaattaactttttaaaaaaagtcagtttcatgactgcagtgtagaagctc 31570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 13711689 - 13711867
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||| |||||||||||||||||| |||| ||||||||  |||||||| ||||| |||||| || |||||||||||||| |||||||||||    
T  13711689 atcagcaactctgtatgcatgttaaagatgccagcgataaaatagtacctgtaagtctaagatgttgcaaacaatactagatgaattactattgatcatt 13711788  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||| ||||||| ||||||||||||| | | |||| | || ||||||||  |||||||||||| ||||||| |||||    
T  13711789 aatcagtaatcaacgatttaaaaatgaatcaatcatttaaattaaaattaattttttcaaaaaagacaattttataact 13711867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 19424563 - 19424415
Alignment:
Q  64 aagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaac 163  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | | ||||||||| |||||||||    
T  19424563 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 19424464  T
Q  164 cttttcaaaaaagtcaattttctaactccagtgtggaagctcccattaa 212  Q
     ||||||||||||||| |||  | ||| ||  || ||||||||||||||    
T  19424463 tttttcaaaaaagtcagtttgatgactgcaccgtagaagctcccattaa 19424415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 4264049 - 4263926
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||||||||| || |||||||| || ||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  4264049 atcagcaactctgtttgcatgttaaagatgccaacaataaaatagtacatataagttcaagatgttgcaagcattactagatgaaataatattgatcatt 4263950  T
Q  112 aatcagcaatcaacaatttaaaaa 135  Q
     ||||| |||||||||||||||||    
T  4263949 gatcagtaatcaacaatttaaaaa 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 33550960 - 33550800
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattga----t 107  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||  || |||||||| || |||||||||||||||||||||| | ||||||    |    
T  33550960 atcatcaactatgtttgcatgttaaagatttcaacgataaaatagtacttgaaagtccaatatgttgcaagcattactagatgaataactattgattatt 33550861  T
Q  108 cattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaacctttt 168  Q
     ||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  33550860 tattaaccagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 33550800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 4478595 - 4478717
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||||||| ||| |||||||||  ||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  4478595 atcaccaactctgtttccatgttaaagatgccaatgataaaatagtatcggtaagtccaagatgttgcaagcattactagatgaattgctattgatcatt 4478694  T
Q  112 aatcagcaatcaacaatttaaaa 134  Q
    |||||| ||||||||||||||||    
T  4478695 aatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 29242111 - 29241956
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| || ||| |||||||||||| |||||||  |||||||  ||||||||||||||       | |||||||||||||||| |||||| ||||    
T  29242111 atcatcaactctggttgtatgttaaagatgtcaacgatacaatagtacctgtaagtccaagat-------gaattactagatgaattactattgaacatt 29242019  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaa 174  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||| ||||||    
T  29242018 aatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaa 29241956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 41051260 - 41051112
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatca 123  Q
    |||||||||||||| ||||||| ||| ||||||||  ||||||| |||||| ||| ||||||| |||||||||||  ||||||||||||||||  |||||    
T  41051260 gtttgcatgttaaa-atgccaaggataaaatagtacctgtaagttcaagatgttgtaagcattgctagatgaattgttattgatcattaatcaataatca 41051162  T
Q  124 acaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaa 173  Q
    |||||| ||||||||| | |||||||| || ||||||||  |||||||||    
T  41051161 acaattcaaaaatgaatcaaacattaaaattaaaattaattttttcaaaa 41051112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 19314074 - 19314182
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgt---aagtccaagattttgcaagcattactagatgaattaatattgatc 108  Q
    |||| ||||||||||||||||||||||||| || |||| |||||||| ||||   ||||| ||||| |||||||||||||||||||||||| ||||||||    
T  19314074 atcagcaactatgtttgcatgttaaagatgtcagcgataaaatagtacatgttataagtctaagatgttgcaagcattactagatgaattactattgatc 19314173  T
Q  109 attaatcag 117  Q
    |||||||||    
T  19314174 attaatcag 19314182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 44286179 - 44286284
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||| |||| |||||| ||||||||| |||||||| ||||| |||||||||||  ||||||||||| |||||||||||    
T  44286179 atcaacaactttgtttgcatgttaaatatgctaacgataaaatagtatctgtaagtctaagatgttgcaagcattgttagatgaattactattgatcatt 44286278  T
Q  112 aatcag 117  Q
    ||||||    
T  44286279 aatcag 44286284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 45327950 - 45328025
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcatta 87  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  45327950 atcataaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcatta 45328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 33902317 - 33902407
Alignment:
Q  85 ttactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||||||||||||| ||||||| ||||||| | |||||||||||||||||| || | ||||||||||||||||||||| |||| ||||||    
T  33902317 ttactagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttttaaaaaa 33902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 18257453 - 18257344
Alignment:
Q  70 aagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttc 169  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||| |||| ||||||| ||||||||   |  ||||| || ||||||||| |||||    
T  18257453 aagatgttgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaactttttc 18257354  T
Q  170 aaaaaagtca 179  Q
    | ||||||||    
T  18257353 acaaaagtca 18257344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 45328028 - 45328087
Alignment:
Q  120 atcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtca 45328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 41463512 - 41463400
Alignment:
Q  63 taagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    |||||| ||||| ||| || ||||| ||||| ||||| ||||||||||||||||  ||| || |||||||||||||| | | ||||||||| ||||||||    
T  41463512 taagtctaagatgttgtaaacattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaa 41463413  T
Q  163 ccttttcaaaaaa 175  Q
    | |||| ||||||    
T  41463412 ctttttaaaaaaa 41463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 36642223 - 36642293
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcatta 87  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||   |||||| |||||| ||||||||||||    
T  36642223 caactctgtttccatgttaaagatgccaacgataaaatagtaccggtaagttcaagatgttgcaagcatta 36642293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 17071710 - 17071648
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagat 74  Q
    |||||||| | |||||||||||||||||| |||||||| ||||||||  ||||| ||||||||    
T  17071710 atcatcaaatttgtttgcatgttaaagattccaacgataaaatagtacctgtaaatccaagat 17071648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 17054069 - 17054007
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagat 74  Q
    |||||||| | |||||||||||||||| | |||||||| ||||||||  ||||| ||||||||    
T  17054069 atcatcaaatttgtttgcatgttaaaggttccaacgataaaatagtacctgtaaatccaagat 17054007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 17054005 - 17053960
Alignment:
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaa 156  Q
    ||||||| |||||||||| |||||||||| | ||||||||||||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17053960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 17071646 - 17071601
Alignment:
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaa 156  Q
    ||||||| |||||||||| |||||||||| | ||||||||||||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17071601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 41463823 - 41463779
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatag 56  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||    
T  41463823 atcaacaactctgtttgcatgttaaagatgtcaacgataaaatag 41463779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 9e-68; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 33908467 - 33908640
Alignment:
Q  16 tcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatc 115  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  33908467 tcaactatgtttgtatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagat-aattactattgatcattaatc 33908565  T
Q  116 agcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  33908566 agcaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttctaact 33908640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 699380 - 699547
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  699380 atcatcaactatgtttgcatgttaaagatgccaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgattatt 699479  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||| ||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||    
T  699480 aatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtca 699547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 24886317 - 24886484
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| ||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  24886317 atcatcaactctgtttgcatgttaaagattccaacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 24886416  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  24886417 aatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtca 24886484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 22981023 - 22981190
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  22981023 atcataaactctgtttgcatgttaaagatgccaacgataaaatagtatatgtaagtccaagatgttgcaatcattactagatgaattattattgatcatt 22981122  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||  |||||||||    
T  22981123 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttttaaaaagtca 22981190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 2888390 - 2888216
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| ||||||||||||||||||||| ||||||| ||||||||  |||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  2888390 atcatcaaatatgtttgcatgttaaagatgtcaacgataaaatagtacctgtaagtccaagatgttacaagcattactagatgaattactattgatcatt 2888291  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| ||||||||||||||||||||||    
T  2888290 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtcaattttct 2888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 31705557 - 31705386
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||| ||| |||||||| || |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  31705557 atcatcaactctgtttgcatgttaaagattccaaagataaaatagtacatataagtccaagatgttgcaagcattactagatgaattactattgatcatt 31705458  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| |||||||||||||||||||    
T  31705457 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttcaaaaaagtcaattt 31705386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 35826431 - 35826254
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  35826431 atcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 35826332  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaac 189  Q
    |||||  ||||||||||||||||||||| | ||||||||||||||||||||| |||| ||||||  || |||||||||    
T  35826331 aatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttaaaaaaaaccagttttctaac 35826254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 5830122 - 5830296
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  5830122 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 5830221  T
Q  112 aatcagcaatcaacaatttaaaaatg-aaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||| || | |||||||| ||||||||||| |||||| |||| |||||||||||    
T  5830222 aatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaa-cttttccaaaatgtcaattttct 5830296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 22255412 - 22255579
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||  |||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  22255412 atcatcaactatgtttgcatgttaaatattccaacgataaaatagtacctgtaagtccaagatgttgcaagccttactagatgaattactattgatcatt 22255511  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||| ||||||||||    
T  22255512 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttaaaaaaagtca 22255579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 31786591 - 31786424
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||  ||||| |||||||| |||||||||||||||||||||||| ||||| |||||    
T  31786591 atcatcaactctgattgcatgttaaagatgccaacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgttcatt 31786492  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  31786491 aatcagtaatcaacaatttaaaaatgaatcaaacattaatatcaaaattaactttttcaaaaaagtca 31786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 35511427 - 35511260
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||| |||||||| |||||||||||    
T  35511427 atcatcaaatctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcatt 35511328  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||| ||||||||||    
T  35511327 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtca 35511260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 40133615 - 40133810
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||| ||||||||| |||| |||||     
T  40133615 atcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaattactattaatcatg 40133714  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| |||||||||||||||||||||   ||||||||||| ||||||||| |||||||||||||||||||||| ||| ||  || |||||||||    
T  40133715 aatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 40133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 15992479 - 15992318
Alignment:
Q  18 aactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcag 117  Q
    |||| ||||||||||||||||||||||||||| ||||||||   ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  15992479 aactctgtttgcatgttaaagatgccaacgataaaatagtaccggtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcag 15992380  T
Q  118 caatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
     ||| ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  15992379 taattaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 15992318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 39573060 - 39573208
Alignment:
Q  31 tgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaattt 130  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  39573060 tgttaaagatgccaatgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt 39573159  T
Q  131 aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  39573160 aaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 39573208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 14409286 - 14409123
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||  |||||||||||||| |||||| |||||||| |||||||| |||||||||||    
T  14409286 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacttgtaagtccaagatgttgcaaacattactaaatgaattactattgatcatt 14409187  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    | |||||||||||||||||||||||||| |||||||||| || ||||||||  |||||||||||    
T  14409186 attcagcaatcaacaatttaaaaatgaatcgaacattaaaattaaaattaaatttttcaaaaaa 14409123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 25669806 - 25669969
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||| || || |||||||||||||||||||||||| |||||||||||    
T  25669806 atcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcatt 25669905  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| |||||||||||    
T  25669906 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaa 25669969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 42342951 - 42343118
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||| | ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  42342951 atcatcaactctgtttgcatgttaaagatgtcaacgataaaataggacatgtaagtctaagatgttgcaagcattactagatgaattaccattgatcatt 42343050  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||| ||||||||    
T  42343051 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtca 42343118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 8741825 - 8741664
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatca 116  Q
    ||||| ||||||||||||||||||| ||||||| |||||||| |||||||||||| || |||||||||| |||||||||| || ||||||||||||||||    
T  8741825 caactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaaaatgttgcaagcatcactagatgaaatactattgatcattaatca 8741726  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtc 178  Q
    | ||||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  8741725 gtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtc 8741664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 35504606 - 35504766
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  35504606 tgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatc 35504705  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||||||||||||| | |||||||| ||||||||| || |||||||||||||||||||    
T  35504706 aacaatttaaaaatgaatcaaacattaaaatcaaaattgactttttcaaaaaagtcaattt 35504766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 7208805 - 7208642
Alignment:
Q  16 tcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatc 115  Q
    |||||| |||||||||||||||||| |||||||| |||||||| |||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||    
T  7208805 tcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagttcaagatgttgcaagtattactagatgaattattattgatcattaatc 7208706  T
Q  116 agcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    || ||||||||||||||||||||| | |||||||| || ||||||||| |||| ||||||||||    
T  7208705 agtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttaaaaaaagtca 7208642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 12910585 - 12910752
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| || ||| ||||||||||||||||| ||  |||| || ||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  12910585 atcatcaactctggttgtatgttaaagatgccaacaatacaataatacatgtaagtccaagatgttgcaagcattactagatgaattactattgaacatt 12910684  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||| |||||||||||    
T  12910685 aatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagtca 12910752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 22974024 - 22973853
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| ||||||||||||||||||  | || || |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  22974024 atcaactctgtttgcatgttaaagatttcgacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 22973925  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||| |||||| ||| ||||||    
T  22973924 cagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttaaaaaaaatcagttttct 22973853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 32563370 - 32563537
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||||| |||||||||| ||||| |||||||||||    
T  32563370 atcagcaactctgtttgcatgttatagatgccaacgataaaatagtacatgtaagtctaagatgttgcaagaattactagataaattattattgatcatt 32563469  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||| ||||||||||||||||| | |||||||| || ||||||||| |||||||||||||||    
T  32563470 aatcagcaattaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtca 32563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 36866992 - 36867187
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||||||||||||| |||||| ||||||| ||||||||| |||| |||||     
T  36866992 atcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgtaagtccaagatgttgcaaacattactggatgaattactattaatcatg 36867091  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| |||||||||||||||||||||   ||||||||||| ||||||||| |||| ||||||||||||||||| ||| ||  || |||||||||    
T  36867092 aatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaacttttttaaaaaagtcaattttctgactgcaccgtagaagctccc 36867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 36860654 - 36860828
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| |||||||||||||| ||||||||||||||| |||||||| |||| |||||     
T  36860654 atcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgtaagtccaagatgttgcaagcattactaaatgaattactattaatcatg 36860753  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| || ||||||||||||||||||||| | | ||||||||| ||||||||| |||| |||||||||||||||||    
T  36860754 aattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaattaacttttttaaaaaagtcaattttct 36860828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 8437198 - 8437362
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||  |||||||||||||| ||| || ||||||||||||||||| ||||||||||||||    
T  8437198 atcaactctgtttgaatgttaaagatgccaacgataaaatagtacctgtaagtccaagatgttgaaaacattactagatgaattactattgatcattaat 8437297  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| |||||||||||||||||||||   || ||||| |||||||||||| |||||||||||||||    
T  8437298 cagtaatcaacaatttaaaaatgaattaaatattaaaatcaaaattaactttttcaaaaaagtca 8437362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 17157973 - 17157805
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| |||||||||| |||||||  ||||||| ||||||||  | |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  17157973 atcaactctgtttgcatgataaagatttcaacgataaaatagtacttttaagtccaagatgttgcaagcattactagatgaattattattgatcattaat 17157874  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||| ||||||||||||||||||||| | |||||||| |||||| || || |||||||||||||||||||    
T  17157873 cagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaacttgactttttcaaaaaagtcaattt 17157805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 22019853 - 22020020
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||||||||||||||||||||| ||||| ||  |||||||| ||||| ||| |||||||||||||||||||| |||||||||||    
T  22019853 atcagcaactctatttgcatgttaaagatgccaacgataaaataatacttgtaagtctaagatgttgtaagcattactagatgaattactattgatcatt 22019952  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | || |||||||| ||||||||| |||||||||||||||    
T  22019953 aatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaaattaactttttcaaaaaagtca 22020020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 25889600 - 25889767
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||||  ||||| |||||||| ||| |||||||||||||||||||| |||||||||||    
T  25889600 atcatcaactctgtttgcatgttaaagataccaacaataaaatagtacctgtaaatccaagatgttgaaagcattactagatgaattactattgatcatt 25889699  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||||||||||||||||||   ||||||||||||||||||||| ||| || ||||||||    
T  25889700 aatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttttccagaaaagtca 25889767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 38528182 - 38528019
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | | ||| ||||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  38528182 atcatcaaatctatttacatgttaaagatatcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 38528083  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||    
T  38528082 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 38528019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 9200454 - 9200617
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||| | |||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  9200454 atcagcaactctgtttgcatgttaaagatgccaacgataaaatagtatctataagtctaagatgttgcaagcattactagatgaattactattgatcatt 9200553  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||  |||| || ||||||||  |||||||||||    
T  9200554 aatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaattaattttttcaaaaaa 9200617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 19120101 - 19120256
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatca 123  Q
    |||||||||||||||||||||||||| ||||||||  |  ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||  ||||    
T  19120101 gtttgcatgttaaagatgccaacgataaaatagtacctcaaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtgatca 19120200  T
Q  124 acaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||| | | ||||||||| ||||||||| |||||||||||||||    
T  19120201 acaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtca 19120256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 27330534 - 27330705
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||||||||||||  |||| || |||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  27330534 atcagcaactctatttgcatgttaaagatttcaacaataaaatggtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 27330633  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||| ||| ||||||||||||| | ||||||||||| ||||||||| |||||||| ||||||||||    
T  27330634 aatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaacaagtcaattt 27330705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 5837785 - 5837952
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||||||||||||| ||||||  ||||||||  || ||||||||||| |||||||||||||||||||||||| | |||||||||    
T  5837785 atcagcaactctctttgcatgttaaagatgacaacgacaaaatagtacctgcaagtccaagatgttgcaagcattactagatgaattactgttgatcatt 5837884  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||  ||||||||||||||||||||| | | |||||| || |||||||||||||||||||||||||    
T  5837885 aatcaataatcaacaatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaagtca 5837952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 7693456 - 7693618
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatca 116  Q
    ||||| ||||||||||||||||||| ||||||| ||||| ||  |||||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  7693456 caactctgtttgcatgttaaagatgtcaacgataaaataatacttgtaagtctaagatgttgcaagcattactagatgaattactattgttcattaatca 7693555  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    | ||||||||||||||||||||| | |||||||| || ||||||||| |||| | ||||||||    
T  7693556 gtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttagaaaagtca 7693618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 43308605 - 43308427
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |  ||||||||||||||| || || || ||||||||  |||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  43308605 atcatcaactcttcttgcatgttaaagattccgacaataaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactattgatcatt 43308506  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||| ||||||||||||||||| ||| | || | ||| |||||||||||| ||||||||||||||| ||| ||||||    
T  43308505 aatcagaaatcaacaatttaaaaacgaatcaaatactaaaatcaaaattaactttttcaaaaaagtcagtttcctaact 43308427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 28416470 - 28416329
Alignment:
Q  38 gatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatg 137  Q
    |||||||||||| ||||||||  | |||||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |    
T  28416470 gatgccaacgataaaatagtacttttaagtccaagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaag 28416371  T
Q  138 aaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    || | ||||||||||| ||||||||| |||||||||||||||    
T  28416370 aatcaaacattaagattaaaattaactttttcaaaaaagtca 28416329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 35934126 - 35934289
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||| |||| || ||||||||   ||||||||||||| |||||||||||||||| ||||||| |||||||||||    
T  35934126 atcagcaactttgtttccatgttaaagatgtcaacaataaaatagtaccggtaagtccaagatgttgcaagcattactagttgaattattattgatcatt 35934225  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||  | |||||||| || ||||||||| |||||||||||    
T  35934226 aatcagtaatcaacaatttaaaaatgattcaaacattaaaattaaaattaactttttcaaaaaa 35934289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 13956307 - 13956104
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||  ||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  13956307 atcatcaaatttgtttgcatgttaaagatgccaacgataaaatagtacctgttagtccaagatgttgcaagcattactagatgaattactattgatcatt 13956208  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatta 211  Q
    |||||| ||||||||||||  || |    | |||||||| |||||||||||| ||||||||||| |||  ||||| ||| ||  || ||||||| | |||    
T  13956207 aatcagtaatcaacaattt--aactttttcaaacattaaaatcaaaattaacattttcaaaaaaatcagctttctgactgcaccgtagaagctctcttta 13956110  T
Q  212 attaat 217  Q
    ||||||    
T  13956109 attaat 13956104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 23116167 - 23116008
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||||||||||||||         | |||||||||||    
T  23116167 atcatcaaatctgtttgcatgttaaagatgtcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactg--------actattgatcatt 23116076  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  23116075 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 23116008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 25500853 - 25500708
Alignment:
Q  30 atgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatt 129  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||| ||||||||||||||||||||| || | ||||||||||||||| ||| |||||||    
T  25500853 atgttaaagatgccaacgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatt 25500754  T
Q  130 taaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||||||| | || | |||||| ||||||||| |||||||||||    
T  25500753 taaaaatgaatcaaatactaagattaaaattaactttttcaaaaaa 25500708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 27318432 - 27318259
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||  ||||  ||||| |||||| |||||||| |||||||| |||||||||||    
T  27318432 atcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacat--aagtttaagatgttgcaaacattactatatgaattactattgatcatt 27318335  T
Q  112 aatcagcaatcaacaa-tttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||  ||||||||| |||||||||||| | ||||||||||| ||||||||| |||| |||||||||| ||||||    
T  27318334 aatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttttaaaaaagtcagttttct 27318259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 15724718 - 15724881
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||| |||| || ||||||||  ||||||||||| || ||| |||||||||||||||||||| |||| ||||||    
T  15724718 atcaacaactttgtttacatgttaaagatgtcaactataaaatagtacttgtaagtccaaaatattgtaagcattactagatgaattactattaatcatt 15724817  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||  ||||||||||||||||||||| | ||||||||  | ||||||||| |||||||||||    
T  15724818 aatcaataatcaacaatttaaaaatgaatcaaacattaaagttaaaattaactttttcaaaaaa 15724881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 43254154 - 43254256
Alignment:
Q  81 agcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaa 180  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||    
T  43254154 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcaa 43254253  T
Q  181 ttt 183  Q
    |||    
T  43254254 ttt 43254256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 30969269 - 30969106
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| |||| || ||||||||| | ||||| ||||||  |||||| |||||||||||| ||| |||| ||||||    
T  30969269 atcagcaactttgtttgcatgttaaagatgtcaacaataaaatagtatctataagttcaagatgctgcaagtattactagatgagttactattaatcatt 30969170  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| |||| |||||||||||||||| | |||||||| || ||||||||| |||| ||||||    
T  30969169 aatcagtaatccacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttaaaaaa 30969106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 1429107 - 1428983
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||| | ||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  1429107 atcataaactttatttgcatgttaaagatgccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 1429008  T
Q  112 aatcagcaa---tcaacaatttaaa 133  Q
    |||||| ||   |||||||||||||    
T  1429007 aatcagtaatattcaacaatttaaa 1428983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 8466988 - 8467119
Alignment:
Q  44 aacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccga 143  Q
    |||||| ||||| ||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| | |    
T  8466988 aacgataaaatattatttgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaa 8467087  T
Q  144 acattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||||| |  ||||||||| |||| ||||||    
T  8467088 acattaaaaataaaattaactttttaaaaaaa 8467119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 21088711 - 21088535
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||||||||||||||| |||||  || ||||| |||||||| ||| |||||||||||||||||||| |||| |||||     
T  21088711 atcatcaactatgtttgtatgttaaagatgccaacgataaaataacatctgtaaatccaagatgttgtaagcattactagatgaattactattaatcatg 21088612  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa-ccttttcaaaaaagtcaattttctaact 190  Q
    |||    ||| | ||||||||||||||| | ||||||||||| ||| ||||   ||||  ||||||||| ||||||||||    
T  21088611 aat---aaataatcaatttaaaaatgaatcaaacattaagattaaagttaatttttttttaaaaagtcagttttctaact 21088535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 26269069 - 26269206
Alignment:
Q  42 ccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaacc 141  Q
    |||| ||| ||||||||  |||||||  ||||| ||| ||||| |||||||| ||||| || |||||||||||||| |||||||||||||||||||||||    
T  26269069 ccaaggataaaatagtacctgtaagtttaagatgttgtaagcaatactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaacc 26269168  T
Q  142 gaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
     | ||||||||| ||||||||| |||||| ||||||||    
T  26269169 aatcattaagattaaaattaactttttcataaaagtca 26269206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 14919473 - 14919317
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| ||||| || |||| |||||    |||||||||| |||||| ||      |||||||||  ||||||||||    
T  14919473 atcatcaactctgtttgcatgttaaagattccaacaataaaattgtata----agtccaagatattgcaatca------gatgaattac-attgatcatt 14919385  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||| | |||||||||||||| | ||||||||||||||||||||  |||||||||||||||    
T  14919384 aatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtca 14919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 23954734 - 23954542
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||| ||| ||||||| ||||||      | ||||||| ||||||||| |||||||||||    
T  23954734 atcatcaactctgtttgcatgttaaa-atgccaacgataaaataatatttgtaagtgcaagatg-----aacattacttgatgaattactattgatcatt 23954641  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatta 211  Q
    |||||       ||||||||||||||||   ||||||||||||| ||||||| ||||||||||||||| ||| || ||| ||   | ||||||||| |||    
T  23954640 aatca-------acaatttaaaaatgaattaaacattaagatcataattaactttttcaaaaaagtcagtttcctgactgcaccatagaagctcccttta 23954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 6824420 - 6824329
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatca 109  Q
    ||||| ||||||||||||||||||| ||| ||| ||| | || ||||||||| ||||| |||||||||| |||||||||  || |||||||||    
T  6824420 caactctgtttgcatgttaaagatgtcaa-gataaaacaatacatgtaagtctaagatgttgcaagcatcactagatgagatactattgatca 6824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 33906441 - 33906634
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  33906441 atcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 33906540  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    ||||||||||||  |||||||||||||| |||| | |||||||||||||||| ||||||||||||||| |||||| ||| || ||| |||||||||    
T  33906541 aatcagcaatca--aatttaaaaatgaatcgaatagtaagatcaaaattaactttttcaaaaaagtcagttttctgactgcactgtagaagctccc 33906634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 16446836 - 16446669
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||| ||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16446836 atcatcaaatctgtttgcatgttaaagatgccaatgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 16446737  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  16446736 aatcagtaatcaacaatttaaaaatgaatctaacattaaaatcaaaattaactttttcaaaaaagtca 16446669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 34895191 - 34895386
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||  |||||||| |||||||| |||||| ||||||||||||||| |||||||| |||||||||||    
T  34895191 atcatcaaatctgtttgcatgttaaagatgccaacgaaaaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcatt 34895290  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||| |||||||||||||| |||||| ||  || |||||||||    
T  34895291 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcaatttcctaactgcaccgtagaagctccc 34895386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 35859163 - 35859330
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||  ||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  35859163 atcatcaaatctgtttgcatgttaaagatgccaacgataaaatagtacttgtaagttcgagatgttgcaagcattactagatgaattaatattgatcatt 35859262  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  35859263 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 35859330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 12587812 - 12587989
Alignment:
Q  13 tcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatta 112  Q
    ||||||||| | ||||||||||||||||| ||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  12587812 tcatcaactctatttgcatgttaaagatgtcaacgataaaatagtacctgtaagtcaaagattttgcaagcattactagatgaattactattgatcatta 12587911  T
Q  113 atcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    ||||| ||| ||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||| || |||||||    
T  12587912 atcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcagttctctaact 12587989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 1149590 - 1149422
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  1149590 atcaactttgtttgcatgttaaagattccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 1149491  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    | | ||||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||    
T  1149490 cggtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttcaaaaaagtcaattt 1149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 4132647 - 4132480
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  4132647 atcatcaactatgtttgcatgttaaagatgccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 4132548  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||  | |||||||||||||||||||||    |||||||||||||||||||| ||| |||||||||||    
T  4132547 aatttgtaatcaacaatttaaaaatgaattacacattaagatcaaaattaacttttccaaaaaagtca 4132480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 7890918 - 7890751
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| || ||||||||||||||| |||||||| |||||||| ||||||||| || || |||||||||||||||||||||||| |||||||||||    
T  7890918 atcatcaactctggttgcatgttaaagattccaacgataaaatagtacatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcatt 7890819  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||    
T  7890818 aatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaaaagtca 7890751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 43643553 - 43643382
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    ||||||| ||||||||||||||| || || || || |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  43643553 atcaactctgtttgcatgttaaaaattccgacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 43643454  T
Q  115 cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| |||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||    
T  43643453 cagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttct 43643382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 8803778 - 8803606
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | |||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||| || ||||||||||    
T  8803778 atcatcaactctatttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattaccagatgaatatactattgatcat 8803679  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||| ||| ||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||    
T  8803678 taatcagtaatgaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaattt 8803606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 23854392 - 23854229
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| || ||||||||||||||| || || || ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  23854392 atcatcaactctgcttgcatgttaaagattccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 23854293  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  23854292 aatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaa 23854229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 27082799 - 27082636
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| || | ||||||    
T  27082799 atcataaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactacttatcatt 27082700  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||  |||||||||||||||||||||   ||||||||||||||||||||| |||||||||||    
T  27082699 aatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaa 27082636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 37970480 - 37970313
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |  || || ||||||||  |||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  37970480 atcatcaactctgtttgcatgttaaagatccttacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactgttgatcatt 37970381  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  37970380 aatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtca 37970313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 35459672 - 35459494
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | |||||| |||||||||||  | || || ||||||||| ||||||||||| || |||||| ||||||||||||||||| |||||||||||    
T  35459672 atcatcaattctgtttgtatgttaaagatttcgacaataaaatagtatctgtaagtccaaaatgttgcaaacattactagatgaattactattgatcatt 35459573  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  35459572 aatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttctaact 35459494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 5299896 - 5299740
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||    
T  5299896 tgtttgcatgttaaagataacaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatc 5299797  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||||   ||||||||||| ||||||||| |||||||||||||||    
T  5299796 aacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtca 5299740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 11727253 - 11727425
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||| |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  11727253 atcaacaactttgtttgaatgttaaagatgccaacgataaaatagtatatgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 11727352  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa-gtcaattt 183  Q
    |||||| ||||||||||||||||||||| | |  |||||||| ||||||||| |||| |||||| ||||||||    
T  11727353 aatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttttaaaaaatgtcaattt 11727425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 38644207 - 38644374
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||| |||||||||| ||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  38644207 atcagcaactctgtttgcaagttaaagatgtcaatgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 38644306  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||| ||||||||||| || | ||||||||||| ||||||||| |||||||||||||||    
T  38644307 aatcagtaatcaaaaatttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtca 38644374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 1953951 - 1953786
Alignment:
Q  10 acatcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatca 109  Q
    |||||||||||| |||||||||||||||| || ||||||| ||||||||  ||||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  1953951 acatcatcaactctgtttgcatgttaaagttgtcaacgataaaatagtacctgtaaatccaagattttgcaagcattattagatgaattactattgatca 1953852  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||||  |||||||||||| |||||||| | ||||||||||||||||||||  |||||||||||    
T  1953851 ttaatcaataatcaacaattttaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaa 1953786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 1205156 - 1205352
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||   |||||| ||||||||  |||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  1205156 atcatcaactctgtttgcatgttaaagattttaacgataaaatagtacctgtaagtccaagatgttgcaagtattactagatgaattactattgatcatt 1205255  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    |||||  ||||| ||||||||||||||| | ||||  ||||||||||||||| |||| ||||||||||||||||| ||| ||  || ||||||||||    
T  1205256 aatcactaatcagcaatttaaaaatgaatcaaacaacaagatcaaaattaacttttttaaaaaagtcaattttctgactacaccgtagaagctccca 1205352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 466061 - 466224
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||| ||| ||||| ||  |||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  466061 atcagcaactctgtttgcatgttaaagatgccaatgataaaataatacctgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 466160  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| | |||||||||    
T  466161 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttattcaaaaaa 466224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 34952018 - 34951851
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| |||||||| ||||||||| ||||| |||||||  |||||| |||||||| |||||||||||    
T  34952018 atcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtctaagatgttgcaagtcttactacatgaattactattgatcatt 34951919  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||| ||||||||    
T  34951918 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtca 34951851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 16223092 - 16223242
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||| |||||||| |||| ||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  16223092 atcatcaactttgtttgcattttaaagattccaatgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 16223191  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||    
T  16223192 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 16223242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 40862651 - 40862820
Alignment:
Q  15 atcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaat 114  Q
    |||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||  |||| |||    
T  40862651 atcaactatgtttgtatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactatttgtcataaat 40862750  T
Q  115 cagcaatcaacaattt-aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||| |||| ||||||| ||||||||| | ||||||||||| |||| |||| |||||||||||||||||||    
T  40862751 cagtaatcgacaatttaaaaaatgaatcaaacattaagattaaaagtaactttttcaaaaaagtcaattt 40862820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 44869726 - 44869893
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||| ||||||| ||||||||    |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  44869726 atcagcaactttgtttccatgttaaagatgtcaacgataaaatagtaccgataagtccaagatattgcaagcattactagatgaattactattgatcatt 44869825  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| || |||||||||||||||||| | |||||||| || ||||||||| |||||||||||||||    
T  44869826 aatcagtaaccaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtca 44869893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 18259321 - 18259479
Alignment:
Q  25 tttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaa 124  Q
    ||||||||||||| ||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| | ||||||| |||| || ||||||    
T  18259321 tttgcatgttaaaaatgtcaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattattgttgatcagtaatgagtaatcaa 18259420  T
Q  125 caatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||||||||||| | | |||||| || |||||||||||||||||||||||||||||    
T  18259421 caatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaagtcaattt 18259479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 24823336 - 24823194
Alignment:
Q  31 tgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaattt 130  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  24823336 tgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaattt 24823237  T
Q  131 aaaaatgaaccgaacattaagatcaaaattaaccttttcaaaa 173  Q
    |||||| || | ||||||||||| ||||||||| |||| ||||    
T  24823236 aaaaataaatcaaacattaagattaaaattaacttttttaaaa 24823194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 1149881 - 1149756
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||  |||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  1149881 atcatcaactttgtttgcatgttaaagattccaacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 1149782  T
Q  112 aatcagcaatcaacaatttaaaaatg 137  Q
    |||||| |||||||||||||||||||    
T  1149781 aatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 31933847 - 31933680
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | |||||||||||||| ||| ||||| || ||||||||  |||||||| ||||| |||||  ||||||||||||||||| |||||||||||    
T  31933847 atcatcaagtctgtttgcatgttaaggattccaacaataaaatagtacttgtaagtctaagatattgcagacattactagatgaattattattgatcatt 31933748  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||| ||||||||||||| | || |||||||||||||||||  |||||||||||||||    
T  31933747 aatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtca 31933680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 36694927 - 36694764
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||| ||||||||||||| |||| |||||     
T  36694927 atcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaaatccaagatgttgcaagcatcactagatgaattactatttatcatg 36694828  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||| || |||||| ||||||||||| || | |||||||| || |||| |||| |||||||||||    
T  36694827 aataagtaatcaataatttaaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaa 36694764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 38 - 183
Target Start/End: Original strand, 33198057 - 33198202
Alignment:
Q  38 gatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatg 137  Q
    |||||||||||| |||||||| ||||||||| || || |||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  33198057 gatgccaacgataaaatagtacatgtaagtctaaaatgttgcaagcatcactagatgaattactattgatcattaatcaataatcaacaatttaaaaatg 33198156  T
Q  138 aaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    || | | ||||||||| || |||||| |||||||||||||||||||    
T  33198157 aatcaatcattaagattaagattaactttttcaaaaaagtcaattt 33198202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 6098479 - 6098331
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtata-----tgtaagtccaagattttgcaagcattactagatgaattaatattga 106  Q
    |||||||||| |||||||||||||||||||||||||||  ||||  |||     |||||||||||||| |||||||||||||||||||||||| ||||||    
T  6098479 atcatcaactctgtttgcatgttaaagatgccaacgatacaatacaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattga 6098380  T
Q  107 tcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatca 155  Q
    |||||||| || ||||||||||||||||||||| | |||||||||||||    
T  6098379 tcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatca 6098331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 10555165 - 10554991
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaatt--aatattgatca 109  Q
    |||||||||| |||||||||||||||||| || || || ||||||||  |||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  10555165 atcatcaactttgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaagatattgcaagcattactagatgaattacactattgatca 10555066  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa-ccttttcaaaaaagtcaattttct 186  Q
    |||   || ||| ||||||||||||||||| | ||||||||||||||||||||   ||||||||||||||||||||||    
T  10555065 tta---agtaataaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttttcaaaaaagtcaattttct 10554991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 39099080 - 39098917
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  39099080 atcagcaactctgtttgcatgttaaatatgtcaacgataaaatagtatatgtaagtccaaaatgttgcaagcattactagatgaattactattgatcatt 39098981  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||| |  |||||| |||||||||||| | | |||||||| || ||||||||  |||| ||||||    
T  39098980 aattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaatttttttaaaaaa 39098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 12876339 - 12876506
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||| || || |||||||||||||||||| |||| |||||     
T  12876339 atcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttacaggcattactagatgaattactatttatcatg 12876438  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || |||||||| ||| ||||| || | |||||||| || |||| |||| |||| ||||||||||    
T  12876439 aataagtaatcaacagtttgaaaataaatcaaacattaaaattaaaagtaacttttttaaaaaagtca 12876506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 30654544 - 30654381
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    ||||| |||| | ||||||||||||| ||  ||||||| ||||||||  |||||||||||||| ||||||||||||||| |||||| || ||||||||||    
T  30654544 atcataaactctatttgcatgttaaaaatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactaaatgaatatattattgatcat 30654445  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||||| ||| |||||||| |||||||| | || ||||| |||||||||||| |||||||||||    
T  30654444 taatcagtaattaacaattt-aaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaa 30654381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 9864377 - 9864504
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||  ||||||| |||||| |||||||||||||||||||||| | || | |||||     
T  9864377 atcatcaattttgtttgcatgttaaagatgccaacgataaaatagtacctgtaagttcaagatgttgcaagcattactagatgaataactagtaatcatg 9864476  T
Q  112 aatcagcaatcaacaatttaaaaatgaa 139  Q
    |||| | |||||||||||||||||||||    
T  9864477 aatcggtaatcaacaatttaaaaatgaa 9864504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 41362723 - 41362818
Alignment:
Q  84 attactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||   ||||||||||||||||||||  |||||||||||||||    
T  41362723 attactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttcaaaaaagtca 41362818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 43025974 - 43026099
Alignment:
Q  83 cattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaac-cttttcaaaaaagtcaat 181  Q
    ||||| ||||| ||||| |||||||||| ||||||  |||||||||||||||||||| | |||||||| || |||||||||  ||||||||||| |||||    
T  43025974 cattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttcaaaaaaatcaat 43026073  T
Q  182 tttctaactccagtgtggaagctccc 207  Q
    || |||||  |||| | |||||||||    
T  43026074 ttcctaaccgcagtttagaagctccc 43026099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 13307852 - 13307936
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat 97  Q
    |||| ||||| ||||||||||||||| ||| ||||||| ||||||||   |||||| |||||| ||||||||||||| ||||||||    
T  13307852 atcaacaactctgtttgcatgttaaa-atgtcaacgataaaatagtacccgtaagttcaagatgttgcaagcattacaagatgaat 13307936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 34463704 - 34463792
Alignment:
Q  13 tcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatatt 104  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| ||  | |||||||   || ||||||||||||||| |||||||| ||||    
T  34463704 tcatcaactttgtttgcatgttaaagatgtcaacgataaaataatacctataagtcc---atgttgcaagcattactaaatgaattactatt 34463792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 9864533 - 9864578
Alignment:
Q  145 cattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  9864533 cattaagattaaaattaactttttcaaaaaagtcagtttcctaact 9864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 13307939 - 13307979
Alignment:
Q  143 aacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  13307939 aacattaagattaaaattaactttttcaaaatagtcaattt 13307979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 5e-66; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 12 - 211
Target Start/End: Original strand, 20768312 - 20768511
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  20768312 atcatcaattatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattactattgatcatt 20768411  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatta 211  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||| || ||| ||  || |||||||||||||    
T  20768412 aatcagtaatcaacaatttaaaaatgaattgaacattaagatcaaaattaactttttcaaaaaaatcaatttcctgactgcaccgtagaagctcccatta 20768511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 7234989 - 7234783
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  7234989 atcatcaactatgtttgcatgttaaaaatgccaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcatt 7234890  T
Q  112 aat---cagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    |||   || ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||| ||| || ||| ||  ||  |||||||||    
T  7234889 aatcaacaacaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaaatcattttcctgactacaccgtaaaagctccca 7234790  T
Q  209 ttaatta 215  Q
    |||||||    
T  7234789 ttaatta 7234783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 3879893 - 3879730
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||     
T  3879893 atcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatg 3879794  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  3879793 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaa 3879730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 6091136 - 6090941
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||| |||||||| | |||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  6091136 atcatcaactctgtttgcatattaaagattcaaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 6091037  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||| | |||||| ||| ||  || |||||||||    
T  6091036 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtaagttttctgactgcaccgtagaagctccc 6090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 33619055 - 33619234
Alignment:
Q  12 atcatcaactatgtttgcatgtta-----aagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattga 106  Q
    ||||||||||||||||||||||||     |||||||||||||| |||||||| |||||||||||| || |||||||||||||||||||||||| ||||||    
T  33619055 atcatcaactatgtttgcatgttaagttaaagatgccaacgataaaatagtacatgtaagtccaatatgttgcaagcattactagatgaattactattga 33619154  T
Q  107 tcatta---atcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||    
T  33619155 tcattaatgatcagcaatcaacaatttaaaaatgaatcgaacattaagattaaaattaactttttaaaaaaagtcaattt 33619234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 33892954 - 33892799
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatca 123  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||  |||||    
T  33892954 gtttgcatgttaaagatgccaacaataaaatagtacatgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattaatcaataatca 33892855  T
Q  124 acaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||||||||| | ||||||||| | ||||||||| |||||||||||||||    
T  33892854 acaatttaaaaatgaatcaaacattaaggttaaaattaactttttcaaaaaagtca 33892799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 1946064 - 1946233
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | |||||||||||||||| |||||||| |||||||| ||||||||||||||| || ||||||||| ||||||||| || ||||||||||    
T  1946064 atcatcaactctatttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttacaagcattattagatgaatatactattgatcat 1946163  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaac-cttttcaaaaaagtca 179  Q
    ||||||| ||||||||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||    
T  1946164 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttcaaaaaagtca 1946233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 5627621 - 5627785
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | ||||||||||||||||  ||||||| ||||||||  |||||||||||||| |||||||||||||||| ||||| || ||||||||||    
T  5627621 atcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactaggtgaatatactattgatcat 5627720  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    ||||||| ||||||||||||||||||||| | || ||||| |||||||||||  |||| ||||||    
T  5627721 taatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaatttttttaaaaaa 5627785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 4318776 - 4318626
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||| ||||||||||||||||   | ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  4318776 atcagcaactctgttttcatgttaaagatgtcaacgatgaaatagtacgggaaagtccaagatgttgcaagcattactagatgaattactattgatcatt 4318677  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaa 162  Q
    |||||  |||||||||||||||||| || | |||||||| || ||||||||    
T  4318676 aatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaa 4318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 29182394 - 29182556
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | |||||| |||||||||||||||||| ||||||||  |||||||| ||||| ||||||| ||||||||||||||   || ||||||||    
T  29182394 atcagcaactctatttgcaggttaaagatgccaacgataaaatagtacttgtaagtctaagatgttgcaagtattactagatgaat---tactgatcatt 29182490  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    ||||| |||||||||||||||||||||| | | ||||||||  ||||||||| |||||||||||||    
T  29182491 aatcaacaatcaacaatttaaaaatgaatcaatcattaagactaaaattaactttttcaaaaaagt 29182556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 7054704 - 7054559
Alignment:
Q  35 aaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcattaatcagcaatcaacaatttaaa 133  Q
    |||||| |||||||| ||||||||  |||||||||||||| |||||| |||||||| |||||| || ||||||||||||||||  |||||||||||||||    
T  7054704 aaagattccaacgataaaatagtaactgtaagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaa 7054605  T
Q  134 aatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
     ||||| | |||||||| |||||||||||| |||||||||||||||    
T  7054604 gatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 7054559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 8513458 - 8513618
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||||||| ||| ||||||||   |||||||||| || |||||||||||||||||||||||| |||||||||||    
T  8513458 atcagcaactctgtttccatgttaaagatgccaatgataaaatagtaccggtaagtccaaaatcttgcaagcattactagatgaattactattgatcatt 8513557  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
           ||||||||||||||||||||| | |||||||| || ||||||||| |||||||||||||||    
T  8513558 -------aatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtca 8513618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 6089133 - 6089286
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||||   |||||||||| || ||||||||||||||| |||||||| |||||||||||    
T  6089133 atcagcaactctgtttccatgttaaagatgccaacgataaaatagtaccagtaagtccaaaatgttgcaagcattactatatgaattactattgatcatt 6089232  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaa 172  Q
           ||||||||||||||||||||| | |||||||| || ||||||||  ||||||||    
T  6089233 -------aatcaacaatttaaaaatgaatcaaacattaaaattaaaattaattttttcaaa 6089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 21017066 - 21016916
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||| ||| ||||||| ||||||||       ||| ||||| |||||||||||||||||||||||| |||| |||||     
T  21017066 atcatcaactctgtttgcatgttaaatatgtcaacgataaaatagtac------gtctaagatgttgcaagcattactagatgaattactattaatcatg 21016973  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaacctttt 168  Q
    |||||| ||||||||||||| ||||||| | || |||||||| ||||||||| ||||    
T  21016972 aatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaacttttt 21016916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 33724117 - 33724062
Alignment:
Q  108 cattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaac 163  Q
    |||||||||  || |||||||||||||||||| | |||||||||||||||||||||    
T  33724117 cattaatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30353312 - 30353256
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtc 68  Q
    |||| ||||| ||||||||||||||| ||| ||||||| |||||||| |||||||||    
T  30353312 atcagcaactctgtttgcatgttaaaaatgtcaacgataaaatagtacatgtaagtc 30353256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 8e-65; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 22451189 - 22451350
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  22451189 atcatcaactatgtttgcatgttaaagatgtcaacaataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattattattgatcatt 22451288  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaa 173  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22451289 aatcagcaatcaaaaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaa 22451350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 43975836 - 43975673
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43975836 tgtttacatgttaaagatgccaacgataaaatagtacttgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 43975737  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||||||||||||||||| |||||||||||||||| |||||  ||||||||| ||||| ||||||    
T  43975736 aacaatttaaaaatgaatcgaacattaagatcaagattaattttttcaaaagagtcagttttct 43975673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 46297717 - 46297545
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  46297717 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtatttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 46297618  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaatttt 184  Q
    ||| || ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||| ||||    
T  46297617 aattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttt 46297545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 11357336 - 11357169
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  11357336 atcatcaactctgtttgcatgttaaagataccaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 11357237  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||    
T  11357236 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtca 11357169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 26941215 - 26941020
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  26941215 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 26941116  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccc 207  Q
    |||||| ||||||||||||||||||||| | | | |||| |||||||||||| ||||||||||||||| |||||| ||| ||  || |||||||||    
T  26941115 aatcagtaatcaacaatttaaaaatgaatcaagcgttaaaatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctccc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 40552214 - 40552047
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||| |||    
T  40552214 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccatgatgttgcaagcattactagatgaattactattgattatt 40552115  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  40552114 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtca 40552047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 48355162 - 48355340
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| || || || ||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  48355162 atcatcaactctgtttgcatgttaaagattccgacaataaaatagtatctgtaagtccaagatgttgcaagtattactagatgaattattattgatcatt 48355261  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    |||||| || |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  48355262 aatcagtaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcaatttcctaact 48355340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 4015691 - 4015847
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  4015691 tgtttgcatgttaaagatgccaacggtaaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 4015790  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  4015791 aacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 4015847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 52040877 - 52040710
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  52040877 atcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaatgattattgatcatt 52040778  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||    
T  52040777 aatgagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtca 52040710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 53229107 - 53228944
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  53229107 atcatcaactttgtttgcatgttaaagatgccaacgataaaataatacatgtaagttcaagatgttgcaagcattactagatgaattagtattgatcatt 53229008  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||  ||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||    
T  53229007 aatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaa 53228944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 33698379 - 33698541
Alignment:
Q  17 caactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatca 116  Q
    ||||| ||||||||||||||||||||||||||| ||||||||  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  33698379 caactctgtttgcatgttaaagatgccaacgataaaatagtacctgtaagtctaagatattgcaagcattactagatgaattaatattgatcattaatca 33698478  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    | ||||||||||||||||||||| |   ||||||||| ||||||||| |||||||||||||||    
T  33698479 gtaatcaacaatttaaaaatgaatcagtcattaagattaaaattaactttttcaaaaaagtca 33698541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 1089913 - 1090081
Alignment:
Q  10 acatcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatca 109  Q
    |||||| ||||| | ||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  1089913 acatcaacaactctatttgcatgttaaagatgccaacgataaaatagtacat-taaatccaagattttgcaagcattactagatgaattactattgatca 1090011  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||  ||||||||||||||||||||| | ||||||||||||||||||||| |||| ||||||||||    
T  1090012 ttaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtca 1090081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 22622673 - 22622510
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | |||||| |||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  22622673 atcatcaaatctgtttggatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 22622574  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||| ||||||||||||| | |||||||| |||||||||||| |||||||||||    
T  22622573 aatcagtaatcaactatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaa 22622510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 33378739 - 33378544
Alignment:
Q  13 tcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatta 112  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |||||| |||||| ||||||||||||||||| ||||||||||||    
T  33378739 tcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagttcaagatgttgcaaacattactagatgaattactattgatcatta 33378640  T
Q  113 atcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctccca 208  Q
    ||||  ||||||| ||||||||||||| | ||||||||||| ||||||||  ||||||||||||||| ||| || ||| ||  || ||||||||||    
T  33378639 atcaataatcaacgatttaaaaatgaatcaaacattaagattaaaattaattttttcaaaaaagtcagtttcctgactgcaccgtagaagctccca 33378544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 24708070 - 24707896
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||| ||||| ||||| |||| ||||||    
T  24708070 atcatcaaatttgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagaagttgcaagcattattagataaattactattaatcatt 24707971  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||| ||||||||||| ||||||||||    
T  24707970 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaattttct 24707896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 29099567 - 29099730
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||||| |||||| ||||||||  | |||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  29099567 atcagcaactctgtttgcatgttaaagatgctaacgataaaatagtacctttaagtccaagatgttgcaagcattactagatgaattaccattgatcatt 29099666  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||||||||||||||||||||||||| | |||||||| || ||||||||| |||||||||||    
T  29099667 aatcagcaatcaacaatttaaaaatgaatcaaacattaatattaaaattaactttttcaaaaaa 29099730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 39282873 - 39283040
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| ||||||||| ||||||||||| |||| || ||||||||| ||||| ||||| || |||||||||||||||||||||||| |||| ||||||    
T  39282873 atcatcaaatatgtttgcctgttaaagatgtcaacaataaaatagtatctgtaaatccaaaatgttgcaagcattactagatgaattactattaatcatt 39282972  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  39282973 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 39283040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 42506030 - 42505859
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||  |||| ||||||||||||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  42506030 atcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 42505931  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | | | |||| |||||||||||| || ||||||||||||||||    
T  42505930 aatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaattt 42505859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 3362474 - 3362647
Alignment:
Q  10 acatcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatca 109  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||| |||  |  |||||||| || |||||||||||||| ||||||||| |||||||||    
T  3362474 acatcatcaactctgtttgcatgttaaagatgtcaacgataaaattgtacttagaagtccaatatgttgcaagcattactggatgaattactattgatca 3362573  T
Q  110 ttaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||| ||||||| ||| |||||||||||||||    
T  3362574 ttaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagtcaattt 3362647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 12 - 216
Target Start/End: Complemental strand, 21009757 - 21009552
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    ||||||||| || |||||||||||||||| |||||||| ||||||||  |||||||| ||||| |||||||||||||||||||||| || ||||||||||    
T  21009757 atcatcaacaatatttgcatgttaaagattccaacgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaatatactattgatcat 21009658  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctcccatt 210  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||  |||| |||||||||| ||| || ||| ||  || ||| ||||||||    
T  21009657 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaatttttttaaaaaagtcagtttcctgactgcaccgtagaaactcccatt 21009558  T
Q  211 aattaa 216  Q
    ||||||    
T  21009557 aattaa 21009552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 54506028 - 54506200
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||| ||| | |||||||||||||||| |||||||| ||||||||| | ||||||||| || |||||||||||||||||||||| || ||||||||||    
T  54506028 atcatctactttatttgcatgttaaagattccaacgataaaatagtatttataagtccaaaatgttgcaagcattactagatgaatatactattgatcat 54506127  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||||||    
T  54506128 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaattt 54506200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 14586634 - 14586468
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||| |||||||||||||||||| ||||| || ||||||||    
T  14586634 atcaacaactatgtttgcatgttaaagatgccaacgataaaatagtacg-gtaagtccaagatgttgcaagcattactagataaattactactgatcatt 14586536  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||||||||||||||| || | ||||||||||| ||||||||  |||||||||||||||    
T  14586535 aatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaattttttcaaaaaagtca 14586468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 44186472 - 44186301
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||| ||| ||||||||  | |||||| ||||| |||||||||||||||||| ||||| |||||||||||    
T  44186472 atcaacaactctgtttgcatgttaaagatgccaatgataaaatagtacctctaagtctaagatgttgcaagcattactagataaattactattgatcatt 44186373  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| ||||| ||||| |||||||    
T  44186372 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttcgaaaaaatcaattt 44186301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 2008153 - 2008327
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  2008153 atcagcaactctgtttgcatgttaaagatgacaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaaataatattgatcatt 2008252  T
Q  112 aatcag-------caatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||        ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  2008253 aatcagtaatcattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 2008327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 37157940 - 37158096
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    |||||| |||||||||||||||| ||| |||||||| |||||||||||| || | ||||||||||||||||||||||  ||||||||||||| || ||||    
T  37157940 tgtttgtatgttaaagatgccaatgataaaatagtacatgtaagtccaatatgtcgcaagcattactagatgaattaccattgatcattaatgagtaatc 37158039  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  37158040 aacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 37158096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 25579960 - 25580131
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| |||  |||  | ||| || ||||| |||||||||||||||||||||||| |||||||||||    
T  25579960 atcagcaactctgtttgcatgttaaagatgccaacgataaaactgtacctataaatctaagatattgcaagcattactagatgaattactattgatcatt 25580059  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || |||||| |||| ||||||||||||||    
T  25580060 aatccgcaatcaacaatttaaaaatgaaccaatcattaagattaagattaacttttttaaaaaagtcaattt 25580131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 40936206 - 40936365
Alignment:
Q  24 gtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatca 123  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||| ||||| |||||||||||||||||| ||||| ||||||||||||||| | |||||    
T  40936206 gtttgcatgttaaagatgccaacgataaaatagtacatgcaagtctaagatgttgcaagcattactagataaattactattgatcattaatcggtaatca 40936305  T
Q  124 acaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||||||||| || | | |||||||||  |||||||| |||||||||||||||||||    
T  40936306 acaatttaaaaataaatcaatcattaagattgaaattaactttttcaaaaaagtcaattt 40936365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 47481743 - 47481915
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    ||||| |||| | ||||||| ||||||||  ||||||| ||||||||  ||||||| |||||| |||||||||||||||||||||| || ||||||||||    
T  47481743 atcataaactctatttgcatattaaagatttcaacgataaaatagtacttgtaagttcaagatgttgcaagcattactagatgaatatactattgatcat 47481842  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||| ||||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||||||    
T  47481843 taatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaattt 47481915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 7327437 - 7327274
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| | ||||||||||||||||||||||||| ||||||||  |||||||| ||||| |||||||||||||||||||||||| |||| ||||||    
T  7327437 atcaacaactctatttgcatgttaaagatgccaacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattaatcatt 7327338  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| ||||||||||||||||||||| | |  |||||||| ||||||||| |||| ||||||    
T  7327337 aatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttttaaaaaa 7327274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 22446020 - 22445853
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||  | ||||||||| || ||||||| |||||| ||||||||| |||||||||||    
T  22446020 atcatcaactatttttgcatattaaagataccaacgataaaatagtacctttaagtccaaaatgttgcaagtattactggatgaattactattgatcatt 22445921  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||| ||||||| ||| |||||||||||    
T  22445920 aatcagtaatcaacaatttaaatatgaatcaaacattaagatcataattaacttttccaaaaaagtca 22445853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 51212726 - 51212558
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| || || || ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  51212726 atcatcaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 51212627  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    ||| |  |||||||||||||||||||||      |||||||||||||||||| |||||||||| |||| ||||||    
T  51212626 aattaaaaatcaacaatttaaaaatgaa------attaagatcaaaattaactttttcaaaaatgtcagttttct 51212558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 37203300 - 37203456
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    |||||| |||||||||||| ||| ||| ||||||||  ||||||||||| || | ||||||||||||||||||||||  ||||||||||||| || ||||    
T  37203300 tgtttgtatgttaaagatgtcaatgataaaatagtacctgtaagtccaatatatcgcaagcattactagatgaattaccattgatcattaatgagtaatc 37203399  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  37203400 aacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 37203456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 21193828 - 21193995
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||| |  ||||| ||||||||   |||||| |||||| |||||| |||||||| |||||||| ||||||| |||    
T  21193828 atcagcaactctgtttgcatgttaaagattctcacgataaaatagtagccgtaagttcaagatgttgcaaccattactaaatgaattactattgattatt 21193927  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  21193928 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 21193995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 44891718 - 44891885
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||| |||||||||||| ||||||| ||||||||  |  ||||| ||||| |||||||||||||||||||||||| | |||||||||    
T  44891718 atcagcaactctgtttgtatgttaaagatgtcaacgataaaatagtacctacaagtctaagatgttgcaagcattactagatgaattactgttgatcatt 44891817  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | | ||||||||| ||||||||| |||| ||||||||||    
T  44891818 aatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttttaaaaaagtca 44891885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 27480308 - 27480142
Alignment:
Q  21 tatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttg----caagcattactagatgaattaatattgatcattaatca 116  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||| || ||     ||| ||||||||||||||||| ||||||| ||||||||    
T  27480308 tatgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaaaatgttaattacaaacattactagatgaattactattgattattaatca 27480209  T
Q  117 gcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    || |||||||||||||||||||| |||||||||||| ||||||||   |||| |||||| |||||||    
T  27480208 gcgatcaacaatttaaaaatgaatcgaacattaagaacaaaattatatttttaaaaaaaatcaattt 27480142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 46994616 - 46994490
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| |||||||||||| ||||||| || || || ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  46994616 atcatcaattatgtttgcatgctaaagattccgacaataaaatagtacctgtaagtccaagatattgcaagcattactagatgaattactattgatcatt 46994517  T
Q  112 aatcagcaatcaacaatttaaaaatga 138  Q
    |||||| ||||||||||||||||||||    
T  46994516 aatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 4761603 - 4761438
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||||| |||||||||||||||| || || || ||||||||  | ||||||||| || |||||| |||||| |||||||||| |||| ||||||    
T  4761603 atcatcaactatatttgcatgttaaagattccgacaataaaatagtacctataagtccaaaatgttgcaaacattaccagatgaattactattaatcatt 4761504  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    |||||| |||||||||||| |||||||| | |||||||| |||||||||||| |||| ||||||||    
T  4761503 aatcagaaatcaacaatttgaaaatgaatcaaacattaaaatcaaaattaactttttaaaaaaagt 4761438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 36012371 - 36012528
Alignment:
Q  23 tgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatc 122  Q
    ||||| ||||||||||||||||||||| ||||||||    ||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  36012371 tgtttccatgttaaagatgccaacgataaaatagtaccgataagtccaaaatgctgcaagcattactagatgaattactattgatcattaatcagtaatc 36012470  T
Q  123 aacaatttaaaaatgaaccgaacattaagatcaaaa-ttaaccttttcaaaaaagtca 179  Q
    |||||||||||||| || | |||||||| || |||| ||||| |||||||||||||||    
T  36012471 aacaatttaaaaataaatcaaacattaaaattaaaatttaactttttcaaaaaagtca 36012528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 32373691 - 32373853
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||| ||||||||| ||||||| ||||||||  |||||||| ||||| |||||||||||||||||||||||  |||||||||||    
T  32373691 atcagcaactctgtttgcatattaaagatgtcaacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaatttctattgatcatt 32373790  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaa 175  Q
    |||||| |||||||||||| ||||||||   | || |||||| ||||||||| |||||||||||    
T  32373791 aatcagtaatcaacaattt-aaaatgaattcatcaataagattaaaattaactttttcaaaaaa 32373853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 34133156 - 34133283
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| || | |||||     
T  34133156 atcatcaattttgtttgcatgttaaagatgccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactagtaatcatg 34133255  T
Q  112 aatcagcaatcaacaatttaaaaatgaa 139  Q
    |||| | |||||||||||||||||||||    
T  34133256 aatcggtaatcaacaatttaaaaatgaa 34133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 3655157 - 3654980
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactag--atgaattaatattgatca 109  Q
    ||||||| || |||||||||||||||||| ||| |||| |||||  | || |||||||||||| ||||||||||||||||  |||||||| ||||||| |    
T  3655157 atcatcagctctgtttgcatgttaaagattccatcgataaaataacacatataagtccaagatgttgcaagcattactagatatgaattactattgatta 3655058  T
Q  110 ttaatcagcaatcaacaatttaaaaat-gaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattttct 186  Q
    |||||||| ||||||||||||||||||  || | |||||||| |||||||||||| ||||||||||| ||| ||||||    
T  3655057 ttaatcagtaatcaacaatttaaaaataaaatcaaacattaaaatcaaaattaacattttcaaaaaaatcagttttct 3654980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 11357105 - 11356946
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| || ||| |||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||||||        |||| |||| ||||||    
T  11357105 atcatcaactctggttgtatgttaaatatgccaatgataaaatagtatttgtaagtccaagatgttgcaagcatta--------attactattcatcatt 11357014  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||| || ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  11357013 aattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaactttttcaaaaaagtca 11356946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 24488917 - 24488745
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| | |||||||||||||||||||||| || ||||||| |  |||||| |||||| ||||||||||||||||||| |||| |||| |||||     
T  24488917 atcatcaactctatttgcatgttaaagatgccaacaataaaatagtgtcagtaagttcaagatgttgcaagcattactagatgcattactattaatcatg 24488818  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaa-aaaagtcaattt 183  Q
    |||||  |||||| |||||||||||||| | |||||||| || ||||||||| |||| || ||||||||||||    
T  24488817 aatcaataatcaataatttaaaaatgaatcaaacattaatattaaaattaactttttaaataaaagtcaattt 24488745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 29164030 - 29164190
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||||||||||| |||||| ||||||||  |||||||| ||||| || ||||||||||||||||||||| |||||||||||    
T  29164030 atcagcaactctgtttgcatgttaaagatgctaacgataaaatagtacttgtaagtctaagatgttacaagcattactagatgaattactattgatcatt 29164129  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
           |||||||||||||||||| || | ||||||||||| ||||||||| |||| | ||||||||    
T  29164130 -------aatcaacaatttaaaaataaatcaaacattaagattaaaattaacttttttagaaaagtca 29164190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 54828656 - 54828546
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    ||||||||||||||||| |||||||| || ||||| || |||||||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  54828656 atcatcaactatgtttgtatgttaaaaattccaactataaaatagtacatgtaagtccaagatgttgcaagcattactagataaattactattgatcatt 54828557  T
Q  112 aatcagcaatc 122  Q
    |||||| ||||    
T  54828556 aatcagtaatc 54828546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 50475032 - 50475199
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattg------ 105  Q
    |||||||| | ||||||||| ||||||||| ||| ||| ||||| ||  |||||||||||||| |||||||||||||||||||||||| |||||          
T  50475032 atcatcaaatctgtttgcatattaaagatgtcaaggataaaataatacttgtaagtccaagatgttgcaagcattactagatgaattagtattgatcatt 50475131  T
Q  106 -atcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaa 172  Q
     |||||||||||| |||||| |||||||||||||| | |||||||| |||||||||||  ||||||||    
T  50475132 aatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaaatttttcaaa 50475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 20373140 - 20373051
Alignment:
Q  90 agatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtca 20373051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 38591919 - 38592046
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | | ||||||||| ||||||| ||||||| ||| ||||| ||||| |||||||| |||||||||||| || |  ||||| |||||||||||    
T  38591919 atcatcaaatctatttgcatgtcaaagatgacaacgataaaaaagtatttgtaaatccaagatgttgcaagcattattaaacaaattactattgatcatt 38592018  T
Q  112 aatcagcaatcaacaatttaaaaatgaa 139  Q
    |||||| |||||||||||||||||||||    
T  38592019 aatcagtaatcaacaatttaaaaatgaa 38592046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 45174727 - 45174821
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattga 106  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||||   ||||||||||||| |||||||||||||||||||||||| ||||||    
T  45174727 atcagcaactctgtttccatgttaaagatgccaacgataaaatagtaacggtaagtccaagatgttgcaagcattactagatgaattactattga 45174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 11467045 - 11467198
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| |||||||||||| ||||| |||||||  ||||||||  || ||||| ||||| ||||||       ||||||||||| |||||||||||    
T  11467045 atcaacaactctgtttgcatgtttaagataccaacgacaaaatagtacctgcaagtctaagatgttgcaa-------tagatgaattactattgatcatt 11467137  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    ||||       ||||||||||||||||| | | ||||||||  ||||||||| |||||||||||||||    
T  11467138 aatc-------aacaatttaaaaatgaatcaatcattaagaataaaattaactttttcaaaaaagtca 11467198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 20373199 - 20373137
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagat 74  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  20373199 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatataagtccaagat 20373137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 43348478 - 43348563
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat 97  Q
    |||| ||||| | ||||||||||||||||| ||||||| ||||||||  |||||||  ||||| ||||||||||||||| ||||||    
T  43348478 atcaacaactctatttgcatgttaaagatgtcaacgataaaatagtacttgtaagtttaagatgttgcaagcattactaaatgaat 43348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 53811676 - 53811597
Alignment:
Q  25 tttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatatt 104  Q
    |||||||||||||||| |||||||| ||||| ||   ||||||||||||| ||||| ||||| |||||||||||| ||||    
T  53811676 tttgcatgttaaagataccaacgataaaataatactcgtaagtccaagatgttgcaggcattcctagatgaattactatt 53811597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 11835556 - 11835494
Alignment:
Q  44 aacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattga 106  Q
    |||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||| ||||||    
T  11835556 aacgataaaatagtatttgtaagtccaagatgttgcaaacattactaaatgaattactattga 11835494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 35844577 - 35844639
Alignment:
Q  121 tcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||||||||||||| || | |||||||| || ||||||||| |||||||||||||||||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaactttttcaaaaaagtcaattt 35844639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 36806159 - 36806094
Alignment:
Q  352 tacccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttccaatagggatattt 417  Q
    |||||||||||| |||| ||| ||||||||||||||||||| |||||  |||||||| | ||||||    
T  36806159 tacccaatcatgacaagaaagcatgaaatgatcagctccataacttctattccaatatgcatattt 36806094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 405
Target Start/End: Complemental strand, 49301631 - 49301577
Alignment:
Q  351 ttacccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttcca 405  Q
    |||||||||||||||||||||| ||||| || ||||| |||||| ||| ||||||    
T  49301631 ttacccaatcatggcaagcaagcatgaagtggtcagcaccatgagttctgttcca 49301577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 13498678 - 13498731
Alignment:
Q  152 atcaaaattaaccttttcaaaaaagtcaattttctaactccagtgtggaagctc 205  Q
    |||||||||||| |||| ||||||||||||||||| ||| || ||| |||||||    
T  13498678 atcaaaattaacttttttaaaaaagtcaattttctgactacactgtagaagctc 13498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 34133312 - 34133357
Alignment:
Q  145 cattaagatcaaaattaaccttttcaaaaaagtcaattttctaact 190  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  34133312 cattaagattaaaattaactttttcaaaaaagtcagtttcctaact 34133357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 36515067 - 36515132
Alignment:
Q  352 tacccaatcatggcaagcaagtatgaaatgatcagctccatgacttcggttccaatagggatattt 417  Q
    |||||||||||| |||| ||| |||||||| |||||||||| |||||  |||||||| | ||||||    
T  36515067 tacccaatcatgacaagaaagcatgaaatggtcagctccataacttctattccaataagcatattt 36515132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 110; Significance: 3e-55; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 408384 - 408223
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  408384 atcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 408285  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaa 173  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||  |||||||||    
T  408284 aatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaattttttcaaaa 408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 94055 - 93894
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||| | ||||||||||||||||||| ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  94055 atcatcaaatttgtttgcatgttaaagatgtcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcatt 93956  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaa 174  Q
    |||||  |||||||||||| |||||||| | |||||||| |||||||||||| |||| |||||    
T  93955 aatcactaatcaacaattt-aaaatgaatcaaacattaaaatcaaaattaacttttttaaaaa 93894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 364 - 517
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||       ||||||||| |||||||||||||||||||||||| |||| |||||     
T  364 atcatcaactctgtttgcatgttaaagatgccaacgataaaatagtac------gtccaagatgttgcaagcattactagatgaattactattaatcatg 457  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaa 171  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||    
T  458 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaa 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 8117 - 8288
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||  |||| ||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  8117 atcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcatt 8216  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    |||||| ||||||||||||||||||||| | | | |||| |||||||||||| || ||||||||||||||||    
T  8217 aatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaattt 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 12139 - 12303
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  12139 atcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcatt 12238  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagt 177  Q
    |||||| |||||||||||||||||| || | ||||||||||| ||||||||| |||| ||||||||    
T  12239 aatcagtaatcaacaatttaaaaat-aatcaaacattaagattaaaattaacttttttaaaaaagt 12303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 44186 - 44353
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||||| | ||||||||||||||  |||||||| |||||||||||    
T  44186 atcatcaactttgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcatt 44285  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||||||||||||||||||   |||||||| |||||||| ||| |||||||||||||||    
T  44286 aatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaagtca 44353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 154601 - 154434
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||| ||||||||||||| | ||||||||||||||  |||||||| |||||||||||    
T  154601 atcatcaactttgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcatt 154502  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| |||||||||||||||||||||   |||||||| |||||||| ||| |||||||||||||||    
T  154501 aatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaagtca 154434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 145971 - 145799
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaat-taatattgatcat 110  Q
    |||||||||| | |||||||||||||||| |||||||| ||||||| | |||||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  145971 atcatcaactctatttgcatgttaaagattccaacgataaaatagtgtctgtaagtccaagatgttgcaagcattactaaatgaatatacaattgatcat 145872  T
Q  111 taatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaattt 183  Q
    ||||||| ||| || ||||||||||||||   |||||||| |||||||||||| |||||||||||||||||||    
T  145871 taatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaattaactttttcaaaaaagtcaattt 145799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 267515 - 267673
Alignment:
Q  12 atcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtatatgtaagtccaagattttgcaagcattactagatgaattaatattgatcatt 111  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||||  |||||| ||||||||||||||||         |      
T  267515 atcatcaactttgtttgcatgttaaagatgccaacgataaaataatacatgtaagtccaagatgctgcaagaattactagatgaatta---------acc 267605  T
Q  112 aatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtca 179  Q
    |||||| ||||||||||||||||||||| | || |||||||||||||||||  |||||||||||||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtca 267673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 100993 - 101058
Alignment:
Q  60 atgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaa 127  Q
    ||||||||||||||| ||||||||||||||| ||| |||| ||  ||||||||||||| |||||||||    
T  100993 atgtaagtccaagatgttgcaagcattactaaatgcattacta--gatcattaatcagtaatcaacaa 101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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