View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3611_low_9 (Length: 311)
Name: NF3611_low_9
Description: NF3611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3611_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 45658644 - 45658954
Alignment:
| Q |
1 |
gtttggtttgattatgatactaattgattgattaagcat----cattaatttgcatccaataatacaatttatattttttactgttttggatttgaaaat |
96 |
Q |
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| T |
45658644 |
gtttggtttgattatgatactaattgattgattaagcatgcatcattaatttgcatccaataatacaatttatattttttactgttttggatttgaaaat |
45658743 |
T |
|
| Q |
97 |
acgaaaaaggtgaggtaagagaacttgaaaaagtagagacatagtgtgtgataagtagcatggagaggacaagtagtgaaccacagacagaggcaaacaa |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
45658744 |
acgaaaaaggtgaggtaagagaacttgaaaaagtagagacatagtgtgtgataagtaggatggagaggacaagtagtgaaccacagacagaggcaaacaa |
45658843 |
T |
|
| Q |
197 |
ttttgagctatttcttcacaaacaccatttcatttgaactttactattcttgtctaaaacttaactctcattatcgagacaatggtaaggttctactcat |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45658844 |
ttttgagctatttcttcacaaacaccatttcatttgaactttactattcttgtctaaaacttaactctcattatcgagacaatggtaaggttctactcat |
45658943 |
T |
|
| Q |
297 |
tcatctcactc |
307 |
Q |
| |
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||||||||||| |
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| T |
45658944 |
tcatctcactc |
45658954 |
T |
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