View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3612_low_9 (Length: 324)
Name: NF3612_low_9
Description: NF3612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3612_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 17 - 312
Target Start/End: Complemental strand, 6192358 - 6192063
Alignment:
| Q |
17 |
atatatagacttagccctccaaaaccctgaaaaacctcctcccaaacagaccctaagactcagactaggaatttaaggcatctacgataatgagagtaaa |
116 |
Q |
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| T |
6192358 |
atatatagacttagccctccaaaaccctgaaaaacctcctcccaaacagaccctaagactcagactaggaatttaaggcatctacgataatgagagtaaa |
6192259 |
T |
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| Q |
117 |
ttattctttataaatgctccatcaattgttatccaccttcctcttttgagttcataagattgctgtaataatgaaatagttttgtaatactgcatcattt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6192258 |
ttattctttataaatgctccatcaattgttatccaccttcctcttttgagttcataagattgctgtaataatgaaatagttttgtaatactgcatcattc |
6192159 |
T |
|
| Q |
217 |
aatattaccctatgtctaggtctaagatttcctaggtgtattttaatgatatctccatattagtcctcattttttccattattcacccaattccta |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6192158 |
aatattaccctatgtctaggtctaagatttcctaggtgtattttaatgatatctccatattagtcctcattttttccattattcacccaattccta |
6192063 |
T |
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