View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3613_high_14 (Length: 279)
Name: NF3613_high_14
Description: NF3613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3613_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 44654286 - 44654533
Alignment:
| Q |
20 |
tttagttcgtcaggttaaattgtttgggatcaatcgttttcactagatgtaactaatctctttttatataaaaatatgacattgctttaaactcctagag |
119 |
Q |
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| T |
44654286 |
tttagtttgtcaggttaaattgtttgggatcaatcgttttcactagatgtaactaatctctttttatataaaaacatgacattgctttaaactcctagag |
44654385 |
T |
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| Q |
120 |
tttgttctagtaataaaaatatatgttttggactcggaggtttttggttcaagatctattaatacttttaaaatgagatagatgtatatatttactatta |
219 |
Q |
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| T |
44654386 |
tttgttctagtaataaaaatatatgttttggactcggagatttttggttcaagatctattaatacttttaaaacgagatagatgtatatatttactatta |
44654485 |
T |
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| Q |
220 |
ttcgagctctaatgtcttctgcttttgactaagcatcccctcaaccta |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44654486 |
ttcgagctctaatgtcttctgcttttgactaagcatcccctcaaccta |
44654533 |
T |
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