View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3613_high_27 (Length: 237)

Name: NF3613_high_27
Description: NF3613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3613_high_27
NF3613_high_27
[»] chr5 (41 HSPs)
chr5 (1-222)||(25412396-25412616)
chr5 (1-222)||(13342694-13342915)
chr5 (1-197)||(30182246-30182443)
chr5 (1-197)||(36074358-36074555)
chr5 (1-145)||(37438856-37439002)
chr5 (1-145)||(13239463-13239606)
chr5 (1-216)||(19806047-19806260)
chr5 (37-177)||(27014993-27015131)
chr5 (67-222)||(535537-535691)
chr5 (1-145)||(32636534-32636678)
chr5 (59-222)||(36931880-36932042)
chr5 (1-145)||(42426549-42426692)
chr5 (37-145)||(5057542-5057648)
chr5 (1-140)||(13487919-13488057)
chr5 (1-84)||(30683234-30683317)
chr5 (6-114)||(14520582-14520689)
chr5 (67-217)||(39468912-39469060)
chr5 (132-222)||(30683373-30683462)
chr5 (37-145)||(16650973-16651079)
chr5 (6-114)||(12083815-12083922)
chr5 (91-220)||(533417-533545)
chr5 (37-114)||(9352972-9353047)
chr5 (164-222)||(13239366-13239424)
chr5 (91-145)||(42428822-42428875)
chr5 (37-114)||(11916609-11916685)
chr5 (1-108)||(16649936-16650044)
chr5 (91-222)||(15464958-15465088)
chr5 (52-107)||(38746535-38746590)
chr5 (91-145)||(38746481-38746534)
chr5 (134-222)||(9352844-9352931)
chr5 (135-222)||(16407678-16407764)
chr5 (132-216)||(28751047-28751132)
chr5 (41-128)||(31004777-31004863)
chr5 (181-216)||(38219788-38219823)
chr5 (91-145)||(30683312-30683365)
chr5 (132-165)||(213014-213047)
chr5 (132-165)||(40146719-40146752)
chr5 (62-107)||(42310309-42310354)
chr5 (1-84)||(533540-533623)
chr5 (182-222)||(15045203-15045243)
chr5 (135-222)||(16409114-16409200)
[»] chr8 (42 HSPs)
chr8 (1-222)||(17982286-17982507)
chr8 (1-222)||(19948635-19948856)
chr8 (1-222)||(44303489-44303708)
chr8 (1-222)||(1746532-1746773)
chr8 (4-148)||(31217964-31218108)
chr8 (1-148)||(34254642-34254789)
chr8 (1-148)||(34256818-34256965)
chr8 (67-148)||(19945719-19945800)
chr8 (1-145)||(43036134-43036277)
chr8 (64-144)||(42497926-42498006)
chr8 (132-197)||(19945805-19945870)
chr8 (67-184)||(4283000-4283116)
chr8 (5-145)||(15212497-15212636)
chr8 (132-197)||(34256970-34257034)
chr8 (6-115)||(5702116-5702225)
chr8 (4-144)||(30143054-30143193)
chr8 (132-197)||(42497853-42497917)
chr8 (146-197)||(31217894-31217945)
chr8 (59-145)||(4743565-4743651)
chr8 (132-217)||(12703104-12703188)
chr8 (52-145)||(42435574-42435666)
chr8 (37-113)||(12702989-12703065)
chr8 (2-112)||(33351893-33352003)
chr8 (63-149)||(3051530-3051615)
chr8 (67-149)||(10014866-10014947)
chr8 (67-145)||(11383499-11383576)
chr8 (132-222)||(27810911-27811001)
chr8 (63-128)||(4696252-4696316)
chr8 (67-144)||(27811010-27811086)
chr8 (6-106)||(23799221-23799321)
chr8 (132-216)||(4731278-4731361)
chr8 (1-44)||(19945674-19945717)
chr8 (67-145)||(40221257-40221334)
chr8 (4-143)||(4731371-4731509)
chr8 (142-222)||(7412836-7412915)
chr8 (150-197)||(34254812-34254858)
chr8 (37-114)||(19175370-19175445)
chr8 (72-114)||(1345754-1345798)
chr8 (180-216)||(3051503-3051540)
chr8 (132-165)||(22975986-22976019)
chr8 (52-145)||(22976027-22976119)
chr8 (132-216)||(4733445-4733528)
[»] chr3 (61 HSPs)
chr3 (1-197)||(5260637-5260833)
chr3 (2-222)||(7761878-7762117)
chr3 (1-148)||(45094871-45095019)
chr3 (1-148)||(9636442-9636589)
chr3 (1-148)||(5258458-5258605)
chr3 (2-222)||(7764065-7764305)
chr3 (132-222)||(3393219-3393309)
chr3 (4-145)||(29812774-29812914)
chr3 (2-136)||(29810588-29810721)
chr3 (1-114)||(40734239-40734352)
chr3 (67-148)||(3393314-3393394)
chr3 (37-143)||(31340610-31340715)
chr3 (132-197)||(5258610-5258675)
chr3 (37-145)||(4569444-4569550)
chr3 (6-114)||(40592408-40592516)
chr3 (6-114)||(30709423-30709531)
chr3 (52-145)||(40912830-40912922)
chr3 (6-114)||(48438567-48438675)
chr3 (52-145)||(55302548-55302640)
chr3 (37-145)||(5236808-5236914)
chr3 (37-145)||(43404302-43404408)
chr3 (138-197)||(45094802-45094860)
chr3 (6-115)||(1735929-1736038)
chr3 (6-114)||(16264701-16264808)
chr3 (6-222)||(24694685-24694900)
chr3 (67-145)||(34490725-34490802)
chr3 (76-145)||(6096207-6096275)
chr3 (6-114)||(36029445-36029553)
chr3 (52-145)||(43402373-43402465)
chr3 (37-114)||(47923530-47923606)
chr3 (76-145)||(49200058-49200126)
chr3 (12-114)||(27027064-27027165)
chr3 (76-144)||(44331281-44331348)
chr3 (37-114)||(37726059-37726134)
chr3 (6-114)||(39032182-39032289)
chr3 (61-114)||(27038448-27038501)
chr3 (63-114)||(27986103-27986154)
chr3 (63-114)||(33386302-33386353)
chr3 (67-114)||(37408200-37408247)
chr3 (67-114)||(40735170-40735217)
chr3 (67-130)||(46173241-46173303)
chr3 (37-114)||(8370116-8370191)
chr3 (132-222)||(37726173-37726262)
chr3 (52-145)||(54593197-54593289)
chr3 (182-222)||(9634816-9634856)
chr3 (63-148)||(53921860-53921946)
chr3 (67-114)||(21711614-21711661)
chr3 (63-114)||(27453365-27453416)
chr3 (64-115)||(27974578-27974629)
chr3 (132-222)||(33386174-33386263)
chr3 (9-114)||(8126985-8127090)
chr3 (133-222)||(23198405-23198493)
chr3 (37-114)||(40845037-40845113)
chr3 (132-216)||(34490634-34490717)
chr3 (78-113)||(25929023-25929058)
chr3 (139-197)||(9636601-9636658)
chr3 (133-222)||(23200604-23200692)
chr3 (134-219)||(37408076-37408160)
chr3 (138-222)||(26928117-26928200)
chr3 (63-108)||(39153745-39153789)
chr3 (182-222)||(7167806-7167846)
[»] chr2 (42 HSPs)
chr2 (1-197)||(4503446-4503642)
chr2 (1-222)||(36205977-36206199)
chr2 (1-222)||(2334731-2334951)
chr2 (1-197)||(5723568-5723760)
chr2 (4-144)||(45099466-45099606)
chr2 (2-222)||(36988390-36988630)
chr2 (132-222)||(29867493-29867582)
chr2 (1-145)||(36318323-36318466)
chr2 (132-222)||(34389349-34389438)
chr2 (6-114)||(34389203-34389310)
chr2 (37-145)||(20522606-20522712)
chr2 (1-145)||(6595320-6595452)
chr2 (4-145)||(2837161-2837301)
chr2 (62-149)||(40015314-40015400)
chr2 (37-114)||(28258815-28258890)
chr2 (6-114)||(13569682-13569789)
chr2 (6-114)||(10706890-10706997)
chr2 (6-143)||(21630297-21630433)
chr2 (6-114)||(23078109-23078216)
chr2 (132-194)||(38311996-38312058)
chr2 (76-145)||(14698616-14698684)
chr2 (37-144)||(35447453-35447557)
chr2 (67-114)||(17865590-17865637)
chr2 (138-197)||(45099392-45099451)
chr2 (6-115)||(33118487-33118596)
chr2 (37-114)||(33528261-33528337)
chr2 (67-114)||(39483289-39483336)
chr2 (1-82)||(29867641-29867723)
chr2 (132-197)||(6595460-6595524)
chr2 (37-114)||(8389786-8389862)
chr2 (63-107)||(11690239-11690282)
chr2 (93-145)||(17863903-17863955)
chr2 (129-216)||(36318472-36318559)
chr2 (91-145)||(39284608-39284661)
chr2 (138-222)||(17057725-17057810)
chr2 (138-222)||(17085708-17085793)
chr2 (135-222)||(3492254-3492340)
chr2 (134-218)||(6266315-6266398)
chr2 (135-222)||(25410143-25410229)
chr2 (182-222)||(32247276-32247316)
chr2 (135-222)||(32289185-32289271)
chr2 (135-222)||(40739334-40739420)
[»] chr6 (41 HSPs)
chr6 (1-197)||(30834850-30835047)
chr6 (6-216)||(16452759-16452968)
chr6 (1-197)||(5406512-5406708)
chr6 (1-197)||(5410837-5411033)
chr6 (1-222)||(33160668-33160888)
chr6 (46-222)||(5413807-5413982)
chr6 (1-197)||(31404988-31405183)
chr6 (1-216)||(5411547-5411782)
chr6 (1-216)||(5407222-5407457)
chr6 (1-116)||(16452643-16452758)
chr6 (1-145)||(22964045-22964188)
chr6 (1-145)||(23824205-23824348)
chr6 (63-145)||(9183386-9183467)
chr6 (6-114)||(31086110-31086219)
chr6 (6-114)||(18234435-18234543)
chr6 (6-114)||(5017133-5017241)
chr6 (67-145)||(603617-603694)
chr6 (40-114)||(10076828-10076901)
chr6 (1-70)||(5413706-5413775)
chr6 (67-148)||(21272593-21272673)
chr6 (37-145)||(21593159-21593265)
chr6 (67-115)||(26954683-26954731)
chr6 (63-145)||(5571871-5571952)
chr6 (180-221)||(5407440-5407481)
chr6 (180-221)||(5411765-5411806)
chr6 (165-222)||(9183507-9183564)
chr6 (141-222)||(22964205-22964286)
chr6 (37-114)||(31979901-31979977)
chr6 (67-114)||(23896745-23896792)
chr6 (132-221)||(5756989-5757077)
chr6 (37-114)||(5757116-5757191)
chr6 (188-222)||(16452959-16452993)
chr6 (67-145)||(24435579-24435656)
chr6 (76-114)||(26661472-26661510)
chr6 (76-114)||(26767443-26767481)
chr6 (78-145)||(3809318-3809381)
chr6 (1-49)||(9183345-9183393)
chr6 (154-222)||(23824107-23824175)
chr6 (132-222)||(23896831-23896920)
chr6 (63-108)||(28137796-28137840)
chr6 (132-216)||(17759357-17759440)
[»] chr1 (47 HSPs)
chr1 (1-197)||(13316632-13316828)
chr1 (1-148)||(20762379-20762526)
chr1 (4-222)||(3206599-3206838)
chr1 (132-197)||(20762309-20762374)
chr1 (132-222)||(3188964-3189053)
chr1 (132-222)||(3197781-3197870)
chr1 (1-158)||(30476762-30476918)
chr1 (1-145)||(49918060-49918203)
chr1 (67-145)||(11348212-11348289)
chr1 (6-114)||(13598752-13598860)
chr1 (1-107)||(28223735-28223841)
chr1 (1-145)||(31658949-31659092)
chr1 (1-107)||(28220540-28220646)
chr1 (59-128)||(3189078-3189148)
chr1 (59-128)||(3197895-3197965)
chr1 (6-114)||(3282059-3282166)
chr1 (37-114)||(13604260-13604335)
chr1 (6-114)||(21536208-21536315)
chr1 (1-144)||(10924935-10925077)
chr1 (9-127)||(29652168-29652286)
chr1 (63-154)||(46064620-46064710)
chr1 (63-149)||(16455353-16455438)
chr1 (1-141)||(1833236-1833376)
chr1 (6-114)||(37070119-37070227)
chr1 (76-145)||(44454870-44454938)
chr1 (132-216)||(49917969-49918052)
chr1 (52-143)||(37033652-37033742)
chr1 (67-144)||(29135762-29135838)
chr1 (37-145)||(193105-193211)
chr1 (132-216)||(11348121-11348204)
chr1 (72-124)||(15820038-15820090)
chr1 (132-222)||(13604132-13604221)
chr1 (132-222)||(31658852-31658941)
chr1 (51-148)||(13547671-13547766)
chr1 (51-148)||(13549582-13549677)
chr1 (135-222)||(19365805-19365891)
chr1 (86-141)||(3156582-3156636)
chr1 (135-222)||(19360949-19361035)
chr1 (59-114)||(22819835-22819890)
chr1 (132-222)||(24202288-24202377)
chr1 (86-114)||(16124297-16124325)
chr1 (182-222)||(25439435-25439475)
chr1 (182-222)||(25444628-25444668)
chr1 (76-144)||(37879498-37879565)
chr1 (132-216)||(37879574-37879657)
chr1 (182-222)||(39446006-39446046)
chr1 (182-222)||(41391109-41391149)
[»] chr7 (52 HSPs)
chr7 (1-197)||(24515074-24515270)
chr7 (1-197)||(35853571-35853769)
chr7 (1-222)||(29990688-29990909)
chr7 (1-148)||(4178482-4178629)
chr7 (24-221)||(19495585-19495802)
chr7 (1-222)||(23554653-23554894)
chr7 (1-177)||(2761616-2761791)
chr7 (37-216)||(48491219-48491395)
chr7 (132-197)||(4178412-4178477)
chr7 (37-222)||(44847656-44847838)
chr7 (1-162)||(46515898-46516058)
chr7 (1-145)||(18126355-18126498)
chr7 (1-145)||(47676450-47676593)
chr7 (3-145)||(14070149-14070291)
chr7 (3-145)||(14380177-14380319)
chr7 (6-114)||(21983595-21983702)
chr7 (67-152)||(1113360-1113444)
chr7 (1-145)||(47674257-47674400)
chr7 (6-114)||(49092041-49092150)
chr7 (59-145)||(43863972-43864057)
chr7 (1-145)||(4585872-4586015)
chr7 (52-145)||(6360495-6360587)
chr7 (37-143)||(27347636-27347740)
chr7 (37-114)||(2647334-2647410)
chr7 (67-144)||(26417025-26417101)
chr7 (70-114)||(2479751-2479795)
chr7 (67-145)||(4538931-4539008)
chr7 (6-114)||(21989260-21989367)
chr7 (132-222)||(21989405-21989494)
chr7 (67-145)||(33332057-33332134)
chr7 (37-114)||(47264027-47264102)
chr7 (79-144)||(2389786-2389850)
chr7 (37-113)||(3050494-3050569)
chr7 (132-216)||(43863880-43863964)
chr7 (37-145)||(48489141-48489247)
chr7 (132-219)||(4796181-4796268)
chr7 (142-221)||(47264151-47264229)
chr7 (132-222)||(2479834-2479923)
chr7 (67-149)||(6570300-6570381)
chr7 (91-145)||(31733354-31733407)
chr7 (67-145)||(32358434-32358511)
chr7 (76-145)||(4796276-4796344)
chr7 (1-53)||(30025046-30025099)
chr7 (129-177)||(29608192-29608240)
chr7 (135-222)||(39730970-39731056)
chr7 (135-222)||(48408435-48408521)
chr7 (144-222)||(21983753-21983830)
chr7 (134-216)||(48599963-48600044)
chr7 (91-128)||(29608263-29608299)
chr7 (132-212)||(6360595-6360674)
chr7 (135-222)||(18414152-18414238)
chr7 (78-145)||(30026391-30026456)
[»] chr4 (56 HSPs)
chr4 (2-222)||(52082972-52083191)
chr4 (2-222)||(52093979-52094198)
chr4 (1-222)||(48142687-48142895)
chr4 (4-145)||(52095679-52095818)
chr4 (4-221)||(54200223-54200439)
chr4 (87-197)||(30000873-30000982)
chr4 (1-148)||(5370400-5370536)
chr4 (1-158)||(29254192-29254348)
chr4 (1-145)||(34570728-34570871)
chr4 (1-145)||(56178950-56179082)
chr4 (6-145)||(54867531-54867669)
chr4 (1-94)||(30000119-30000212)
chr4 (1-145)||(37740337-37740480)
chr4 (1-145)||(5429391-5429533)
chr4 (6-145)||(36314837-36314975)
chr4 (6-145)||(36329046-36329184)
chr4 (6-114)||(8689134-8689241)
chr4 (1-145)||(25861640-25861784)
chr4 (132-197)||(5370541-5370606)
chr4 (37-145)||(26363758-26363864)
chr4 (67-145)||(12745796-12745874)
chr4 (132-222)||(52095826-52095915)
chr4 (6-114)||(5268837-5268945)
chr4 (132-197)||(56179090-56179154)
chr4 (37-144)||(6655450-6655555)
chr4 (42-144)||(9927817-9927917)
chr4 (37-114)||(16622931-16623006)
chr4 (67-145)||(46570124-46570201)
chr4 (59-145)||(54882533-54882618)
chr4 (72-145)||(41639058-41639130)
chr4 (6-145)||(6743022-6743160)
chr4 (37-113)||(27417520-27417595)
chr4 (37-114)||(16628510-16628585)
chr4 (68-114)||(38152075-38152121)
chr4 (59-108)||(39773981-39774030)
chr4 (39-114)||(5148064-5148137)
chr4 (167-221)||(5048826-5048880)
chr4 (91-141)||(12739942-12739992)
chr4 (91-141)||(12748148-12748198)
chr4 (64-114)||(24968851-24968901)
chr4 (91-145)||(26176028-26176081)
chr4 (52-145)||(50674429-50674521)
chr4 (67-114)||(3777961-3778008)
chr4 (67-114)||(5396328-5396375)
chr4 (132-222)||(13992753-13992842)
chr4 (37-114)||(5143645-5143720)
chr4 (91-140)||(35661937-35661985)
chr4 (76-141)||(50263305-50263368)
chr4 (37-145)||(40630477-40630583)
chr4 (91-145)||(2209213-2209266)
chr4 (63-222)||(31985164-31985323)
chr4 (67-143)||(3909810-3909884)
chr4 (132-221)||(5148176-5148264)
chr4 (1-53)||(26175950-26176003)
chr4 (132-216)||(2209122-2209205)
chr4 (135-222)||(28468014-28468100)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-148)||(434239-434387)
[»] scaffold0016 (1 HSPs)
scaffold0016 (9-145)||(114297-114432)
[»] scaffold0140 (1 HSPs)
scaffold0140 (63-222)||(7948-8106)
[»] scaffold0006 (4 HSPs)
scaffold0006 (6-114)||(6037-6145)
scaffold0006 (6-114)||(2845-2953)
scaffold0006 (37-114)||(132917-132992)
scaffold0006 (132-222)||(132789-132878)
[»] scaffold0014 (1 HSPs)
scaffold0014 (37-145)||(80852-80958)
[»] scaffold0286 (1 HSPs)
scaffold0286 (37-144)||(11052-11157)
[»] scaffold0098 (2 HSPs)
scaffold0098 (37-114)||(45583-45658)
scaffold0098 (134-197)||(45699-45761)
[»] scaffold0066 (1 HSPs)
scaffold0066 (76-145)||(20804-20872)
[»] scaffold0466 (1 HSPs)
scaffold0466 (37-165)||(6800-6927)
[»] scaffold0176 (1 HSPs)
scaffold0176 (67-145)||(17644-17721)
[»] scaffold0087 (3 HSPs)
scaffold0087 (37-114)||(36470-36545)
scaffold0087 (132-221)||(43472-43560)
scaffold0087 (37-114)||(43599-43674)
[»] scaffold0510 (2 HSPs)
scaffold0510 (67-114)||(1248-1295)
scaffold0510 (132-222)||(1120-1209)
[»] scaffold0188 (1 HSPs)
scaffold0188 (135-222)||(17468-17554)


Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 25412616 - 25412396
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  25412616 ctgcaaagaacacttatatagatgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaa 25412517  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  25412516 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaa-cagctctcgacattaccaaaatcgtgtcacgattgcc 25412418  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||||    
T  25412417 aaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 13342915 - 13342694
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  13342915 ctgcaaagaacacttatatagctgtcttctgcctcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatctaaggtacgaccaa 13342816  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  13342815 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctaaaaaccagctctcgacattaccaaaatcgtgtcacgattggc 13342716  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||| ||||||||||||||||    
T  13342715 aaatcatgtcacgatttctctg 13342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 30182443 - 30182246
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttcccc-aattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  30182443 ctgcaaagaacacttttatagctgtcttctgcgtcaaaatcgtgtcacgtttttcccccaatcgtgccacgattgatgcgtacgatccaaggtacgacca 30182344  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  30182343 accttatcctgaaaatcttgcccagcaagccaaaaatcgtgtaacgattggacgccctgaaaaccagctcacgacattaccaaaatcgtgtcacgatt 30182246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 36074358 - 36074555
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||    
T  36074358 ctgcaaagaacacttatatagctgtcttctgcgtcaaaatcatgtcacgttttttcccaatcgtgccatgattgatgcgtacgatccaaggtacgaccaa 36074457  T
Q  101 ccttatcctgaaaatcttgcccaacaagcc-aaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  36074458 ccttatcctgaaaatcttgcccaacaagccaaaaaatcgtgtcacgattggacgcccagaaaaccagctctcgacattaccaaaatcgtgtcacgatt 36074555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37439002 - 37438856
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttcc--ccaattgtgtcacgattgatgcgtacgatccaaggtacgacc 98  Q
    |||||||||||||||||||||  ||||||  | || |||| |||||||||||||    ||||| |||||||||||||||||||||| ||||||||||||     
T  37439002 ctgcaaagaacacttatatagcagtcttcaacatcaaaattgtgtcacgtttttttttccaatcgtgtcacgattgatgcgtacgacccaaggtacgaca 37438903  T
Q  99 aaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37438902 aaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 37438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 13239606 - 13239463
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  |||||| ||||| |||| |||||||||||| |  |||| |||||||||||||||||||||| |||||||||||||||    
T  13239606 ctgcaaagaacacttatatagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaa 13239507  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||| |||| ||| |||| |||| |||||||||||    
T  13239506 ccttatcctgaaaa-cttgtccagcaagtcaaagatcgtgtcacg 13239463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 19806260 - 19806047
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| | | ||| |||| ||| ||||||||| ||||||||||||||    
T  19806260 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaagtcgtgacacgtttggtgcgtacgacccaaggtacgacca 19806162  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgc 199  Q
    |||||||||| |||| | |||| | |||||| ||||||||||||||||||| | ||||| ||| ||||||||||||||  |||||| ||| ||||  |      
T  19806161 accttatcctaaaaa-cgtgcctagcaagccgaaaatcgtgtcacgattgggcaccctgcaaaacagctctcgacatt-gcaaaatcgtgacacgcgtca 19806064  T
Q  200 caaatcgtgtcacgatt 216  Q
    |||||||||||||||||    
T  19806063 caaatcgtgtcacgatt 19806047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 27015131 - 27014993
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||  |||||    
T  27015131 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccaacaagctgaaaat 27015034  T
Q  137 cgtgtcacgattggacgccctgaaaaccagctctcgacatt 177  Q
    |||||||||||||| | ||||| ||| ||||||||||||||    
T  27015033 cgtgtcacgattgggcaccctgcaaaacagctctcgacatt 27014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 535691 - 535537
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccag 166  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| || ||  || ||||||  |    
T  535691 cacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacgactgaacatccagaaaacacg 535593  T
Q  167 ctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||| ||||||||||||| |||| ||   ||||||||||||||||||||||    
T  535592 ctctcgacactaccaaaattgtgacacgcttatgaaatcgtgtcacgatttctctg 535537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 32636678 - 32636534
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  || ||| || ||| ||||| ||||||||||| ||| ||| ||| |||| ||| |||||| || ||||||||||||||    
T  32636678 ctgcaaagaacacttatatagcagttttcagctgtcaaaatcatgtcacgtttt-cccaaatcgtgacacgtttggtgcgtaagacccaaggtacgacca 32636580  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||||||| |||| | ||||||||| ||||    
T  32636579 accttatcctgaaaaacttgcccagcaagtcgaaaatcgtgccacg 32636534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 36932042 - 36931880
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaag-ccaaaaatcgtgtcacgattggacgccct 157  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||  | | ||||    ||||||||||||||||| | | ||||    
T  36932042 aattgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa-cttaacaagcaagtttgaaaatcgtgtcacgatttggcaccct 36931944  T
Q  158 gaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    | |||||||||| |||||| | |||||| ||| ||||| ||||||| |||||||||||||||||||    
T  36931943 gcaaaccagctcacgacatca-caaaatcgtgccacga-tgccaaattcgtgtcacgatttctctg 36931880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 42426549 - 42426692
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| |||| |||||||||||| ||| ||| ||| || | ||| ||||||||| ||||||||||||||    
T  42426549 ctgcaaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttt-cccaaatcgtgacatgtttggtgcgtacgacccaaggtacgacca 42426647  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||||||| ||| || ||||| ||||||||    
T  42426648 accttatcctgaaaa-cttgcccagcaaaccgaaaattgtgtcacg 42426692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 5057648 - 5057542
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||||||| ||| ||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||| | |||||    
T  5057648 aaatcgtgtcacgtttt-cccaaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaa-cttgctcaacaagtcgaaaat 5057551  T
Q  137 cgtgtcacg 145  Q
     ||||||||    
T  5057550 tgtgtcacg 5057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 13488057 - 13487919
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||| ||||||||||||   |||||| || ||| |||| |||||||||||| ||| ||| ||| |||| ||| ||||||||| ||||||||||||||    
T  13488057 ctgcaaaaaacacttatataacagtcttcagctgtcaaaattgtgtcacgtttt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgacca 13487959  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtg 140  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  13487958 accttatcctgaaaa-cttgcccagcaagccgaaaatcgtg 13487919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30683234 - 30683317
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacga 84  Q
    |||||||||||||||||||||  || ||| ||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  30683234 ctgcaaagaacacttatatagcagttttcagcgtcaaaatcgtgtcacgttttcccaaaattgtgtcacgattgatgcgtacga 30683317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 14520582 - 14520689
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||| | || ||| |||||||||||||||||  || ||| ||| ||||||| |||||||||| |||||||||||||||||||    
T  14520582 aagaacacttatataggagtctccagctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattaatgcgtacgacccaaggtacgaccaacctt 14520679  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  14520680 atcctgaaaa 14520689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 39468912 - 39469060
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccag 166  Q
    |||| ||| ||| ||||| |||||||||||||||||||||||| |||| | || ||| |||||| ||||||||||||||||||| |  |||| ||| |||    
T  39468912 cacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaaa-cgtgtccagcaagccgaaaatcgtgtcacgattgggcatcctgcaaaacag 39469010  T
Q  167 ctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgattt 217  Q
    |||||||||||  ||||||  || |||| ||  ||||||||||||||||||    
T  39469011 ctctcgacatt-gcaaaatcatgacacgcttcacaaatcgtgtcacgattt 39469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 30683373 - 30683462
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||| ||||||||||||||| | |||||||| | ||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||||||    
T  30683373 aaaattgtgtcacgattggacactctgaaaac-atctctcgacattaccaaaatcgtgacacgcttgtcaaattgtgtcacgatttctctg 30683462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 16650973 - 16651079
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    |||||||||||| |||| ||  ||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||||| | | |||||||||  | ||||    
T  16650973 aaatcgtgtcacattttgcca-aatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaa-cgtacccaacaagttataaat 16651070  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  16651071 cgtgtcacg 16651079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 12083922 - 12083815
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  ||||||  | ||| |||| ||||||||||||  || ||| ||| |||||||| ||| ||||| |||||||||||||||||||    
T  12083922 aagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgtttt--ccaaatcgtgacacgattggtgcatacgacccaaggtacgaccaacctt 12083825  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  12083824 atcctgaaaa 12083815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 533545 - 533417
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgt 190  Q
    |||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||| ||   | ||||||  ||||||| || ||||||||| |||     
T  533545 gtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaaccgtgtcacgattgaacatgcagaaaacatgctctcggcactaccaaaatcgtga 533447  T
Q  191 cacgattgccaaatcgtgtcacgatttctc 220  Q
      || ||   ||||||||||||||||||||    
T  533446 tgcgcttatgaaatcgtgtcacgatttctc 533417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 9353047 - 9352972
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| ||| ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  9353047 aaatcgtgccacgtttt--ccaaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaa 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 13239424 - 13239366
Alignment:
Q  164 cagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||||||||||||||||| ||| |||| || ||||||||||||||||||| ||||    
T  13239424 cagctctcgacattaccaaaatcgtgacacgcttaccaaatcgtgtcacgatttatctg 13239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 42428822 - 42428875
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  42428822 gtacgaccaaccttatcctaaaaa-cttgcccagcaagccaaaaatcgtgtcacg 42428875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 11916685 - 11916609
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||||||||||| | | ||| |||  ||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  11916685 aaatcgtgtcacgtttt-ctcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaa 11916609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16649936 - 16650044
Alignment:
Q  1 ctgcaaagaa-cacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacc 98  Q
    |||||||||| |||||||||||| |||||  || ||| ||||| |||||| |||| ||  ||| ||| |||| ||| |||||||||||||||||||||||    
T  16649936 ctgcaaagaaacacttatatagtagtctttagctgtcaaaatcatgtcacattttgcca-aatcgtgacacggttggtgcgtacgatccaaggtacgacc 16650034  T
Q  99 aaccttatcc 108  Q
    ||||||||||    
T  16650035 aaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 15464958 - 15465088
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagcca-aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtg 189  Q
    |||||||||||||||||||||||| |||  ||| ||||    ||||||||||||||||| | | ||||| |||||||||| || ||| || ||||| |||    
T  15464958 gtacgaccaaccttatcctgaaaa-cttaaccagcaagtttgaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtg 15465055  T
Q  190 tcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||  | || |||||||||||||||||||    
T  15465056 tcacgataccaaattcgtgtcacgatttctctg 15465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 38746590 - 38746535
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatc 107  Q
    |||||| ||||||| |||| ||| ||||||||| ||||||||||||||||||||||    
T  38746590 tttcccaaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 38746534 - 38746481
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  38746534 gtacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 38746481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 9352931 - 9352844
Alignment:
Q  134 aatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca-aatcgtgtcacgatttctctg 222  Q
    ||||||| ||||||| ||| ||||| |||||||||| || |||||| ||||| |||||||||| |||| ||||| |||||||||||||||    
T  9352931 aatcgtgccacgatttgacaccctgcaaaccagctcacggcattac-aaaatcgtgtcacgat-gccacaatcgcgtcacgatttctctg 9352844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 16407764 - 16407678
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||||| ||||||||||  | || |||||||||||||||||||    
T  16407764 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctg 16407678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 28751047 - 28751132
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaa--atcgtgtcacgatt 216  Q
    |||||||||||||||||| || ||||| ||| || |||||||||||| | |||| |||  |||||||||||  ||||||||||||||    
T  28751047 aaaatcgtgtcacgattgaacaccctgcaaaacaactctcgacatta-cgaaatcgtgaaacgattgccaaatatcgtgtcacgatt 28751132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 31004863 - 31004777
Alignment:
Q  41 cgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaag 128  Q
    |||||||||||| |||  ||| ||| |||||||| ||||||||| |||| |||| |||||||||||||| |||| | |||||| ||||    
T  31004863 cgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcctaaaaaacgtgcccagcaag 31004777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 38219788 - 38219823
Alignment:
Q  181 aaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38219788 aaaattgtgtcacgatttccaaatcgtgtcacgatt 38219823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 30683312 - 30683365
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||| |||||| | |||| | ||||||||||||||    
T  30683312 gtacgaccaaccttatcctgaaaa-cttgcctagcaagtcgaaaatcgtgtcacg 30683365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 213047 - 213014
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaacca 165  Q
    ||||||||||||||||||||||||||| ||||||    
T  213047 aaaatcgtgtcacgattggacgccctgcaaacca 213014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 40146752 - 40146719
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaacca 165  Q
    ||||||||||||||||||||| ||||||||||||    
T  40146752 aaaatcgtgtcacgattggacaccctgaaaacca 40146719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 42310309 - 42310354
Alignment:
Q  62 tgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatc 107  Q
    |||||||| |||||||||||| ||||||| ||| ||||||||||||    
T  42310309 tgtgtcacaattgatgcgtacaatccaagatacaaccaaccttatc 42310354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 533623 - 533540
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacga 84  Q
    ||||||| |||||||||||||  |||||| || ||| ||||||||||||| ||||||| ||| ||| |||| ||| |||||||||    
T  533623 ctgcaaaaaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgcgtacga 533540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 15045203 - 15045243
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  15045203 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 15045243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 16409200 - 16409114
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||| ||| | | || || |||||||||| |||||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  16409200 atcgtgtcacaatttggcaccttgcaaaccagctcacgacatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 16409114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17982507 - 17982286
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17982507 ctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaa 17982408  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17982407 ccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattgaacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgattgcc 17982308  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||| ||||||||||||||||    
T  17982307 aaatcatgtcacgatttctctg 17982286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 19948635 - 19948856
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  19948635 ctgcaaagaacacttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaa 19948734  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
     |||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |    
T  19948735 acttatcataaaaatcttgtccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgattgtc 19948834  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||||    
T  19948835 aaatcgtgtcacgatttctctg 19948856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 44303708 - 44303489
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||||||||||||||    
T  44303708 ctgcaaagaacacttatatagctgtcttctgcgtcgaaatcgtgtcacgattttccccaatcgtgccacaattgatgcgtatgatccaaggtacgaccaa 44303609  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  44303608 ccttatcctggaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaa-cagctctcgacattgcc-aaattgtgtcacgattgcc 44303511  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    |||| |||||||||||||||||    
T  44303510 aaattgtgtcacgatttctctg 44303489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1746532 - 1746773
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  1746532 ctgcaaagaacacttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaa 1746631  T
Q  101 ccttatcctgaaaatcttgcccaacaagcca---------------------aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattac 179  Q
    ||||||||||||||||||||||| |||||||                     ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1746632 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaa-cagctctcgacattac 1746730  T
Q  180 caaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  1746731 caaaatcgtgtcacgattgccaaattgtgtcacgatttctctg 1746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 31218108 - 31217964
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacct 103  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  31218108 caaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgttttttcccaatcgtgtcacgattgatgcgtatgatccaaggtacgaccaacct 31218009  T
Q  104 tatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  31218008 tatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 31217964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34254642 - 34254789
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  34254642 ctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa 34254741  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  34254742 ccttatcctgaaaatcttgcccagcaatccaaaaatcgtgtcacgatt 34254789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34256818 - 34256965
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||    
T  34256818 ctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacaaccaa 34256917  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
     ||||||||||||||||||| || ||||||||||||||||||||||||    
T  34256918 tcttatcctgaaaatcttgctcagcaagccaaaaatcgtgtcacgatt 34256965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 19945719 - 19945800
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19945719 cacgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatcttccccaacaagccaaaaatcgtgtcacgatt 19945800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 43036277 - 43036134
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||   |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| ||||||||||||||||||||| ||    
T  43036277 ctgcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatca 43036179  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||    
T  43036178 accttatcctgaaaa-cttgcccaacaagtcgaaaatcgtgtcacg 43036134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 42498006 - 42497926
Alignment:
Q  64 tgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||    
T  42498006 tgtcacgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcac 42497926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 19945805 - 19945870
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  19945805 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgatt 19945870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 4283116 - 4283000
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccag 166  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| ||  || ||||||  |    
T  4283116 cacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcacgattgaacatccagaaaacatg 4283018  T
Q  167 ctctcgacattaccaaaa 184  Q
    |||||| || ||||||||    
T  4283017 ctctcggcactaccaaaa 4283000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 15212636 - 15212497
Alignment:
Q  5 aaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacct 103  Q
    |||||||||||||||||  |||||| || |||  ||||||||||| |||| ||  ||| ||| |||| ||| ||||||||| ||||||||||||||||||    
T  15212636 aaagaacacttatatagcagtcttcagctgtcacaatcgtgtcacatttt-cctaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacct 15212538  T
Q  104 tatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||| ||||| || |||||| ||||||||||||||    
T  15212537 tatcctgaaaa-cttgctcagcaagccgaaaatcgtgtcacg 15212497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 34256970 - 34257034
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  34256970 aaaatcgtgtcacgattggacgccctgaaaa-cagctctcgacattaccaaaatcgtgtcacgatt 34257034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 5702225 - 5702116
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||| |||||||| ||  ||| ||| |||||||| ||||||| |||||||||||||||||||||    
T  5702225 aagaacacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgcca-aatcgtgacacgattggtgcgtacaatccaaggtacgaccaacctt 5702127  T
Q  105 atcctgaaaat 115  Q
    |||||||||||    
T  5702126 atcctgaaaat 5702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 30143193 - 30143054
Alignment:
Q  4 caaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacc 102  Q
    ||||||||||||||||||  |||||| |  ||| ||||||||||||||||| ||  ||| ||| |||| ||| ||||||||| |||| ||||||||||||    
T  30143193 caaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacgttttgcca-aatcgtgacacggttggtgcgtacgacccaaagtacgaccaacc 30143095  T
Q  103 ttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    ||||||| |||| |||| ||| |||||| |||||||||||||    
T  30143094 ttatccttaaaa-cttgtccagcaagccgaaaatcgtgtcac 30143054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 42497917 - 42497853
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||    
T  42497917 aaaatcgtgtcacgattggacgccctgaaaa-caactctcgacattaccaaaatcgtgtcacgatt 42497853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 31217945 - 31217894
Alignment:
Q  146 attggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31217945 attggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 31217894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 4743565 - 4743651
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||| | |||| | |||| | ||||||||||||||    
T  4743565 aattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacg 4743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 12703104 - 12703188
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgattt 217  Q
    ||||||||||||||||||||| | |||||||| | |||||||||||| |||||| ||| |||| |||||||||| |||||||||||    
T  12703104 aaaatcgtgtcacgattggacactctgaaaacaa-ctctcgacattagcaaaatcgtgacacgcttgccaaatcatgtcacgattt 12703188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 42435574 - 42435666
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||| | |||| | ||||||||||||||    
T  42435574 tttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgccaagcaagacgaaaatcgtgtcacg 42435666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 12702989 - 12703065
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaa 113  Q
    ||||||||||||||||||||| ||| ||| ||||  || ||||||||| |||| |||||||||||||||||||||||    
T  12702989 aaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaa 12703065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 33352003 - 33351893
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||| ||||||||||  |||||| || ||| ||||||||||||||||| ||| |||  || |||| ||| |||||| || |||||||||||||||    
T  33352003 tgcaaagaaaacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcatgacacgtttggtgcgtatgacccaaggtacgaccaa 33351905  T
Q  101 ccttatcctgaa 112  Q
    ||||||||||||    
T  33351904 ccttatcctgaa 33351893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 3051530 - 3051615
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 149  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||| |||||| | || | |||| ||||||||||||||||| ||||    
T  3051530 gtgtcacgattgatgcatacgacccaatgtacgaccaaccttatcttgaaaa-cgtgtcaaacatgccaaaaatcgtgtcacaattg 3051615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 10014947 - 10014866
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 149  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  10014947 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 10014866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 11383576 - 11383499
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||||||||||||| |||| ||||||||||||||||| ||||||| ||||||| |||||  ||||||||||||||    
T  11383576 cacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaat-ttgcccagcaagctgaaaatcgtgtcacg 11383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 27811001 - 27810911
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||||||||||| | | ||||  |   ||||||||||||||||||||||    
T  27811001 aaaatcgtgtcacgattggacaccctgcaaaatagctctcgacattaccaaaatcgcgacacgcctatgaaatcgtgtcacgatttctctg 27810911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 4696316 - 4696252
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaag 128  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  4696316 gtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaag 4696252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 27811086 - 27811010
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    |||| ||| ||||||| | ||||| ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  27811086 cacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcac 27811010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 23799321 - 23799221
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||| |||  ||| ||| ||| |||| ||||||||| |||| ||||||||||||||    
T  23799321 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacaattggtgcgtacgacccaacgtacgaccaacctt 23799223  T
Q  105 at 106  Q
    ||    
T  23799222 at 23799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 4731361 - 4731278
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||  | |||| ||| |||| ||| |||||||||||||||||    
T  4731361 aaaatcgtgtcacgattggacaccctgtaaaacagctcacgacatt-gcgaaatcgtgacacggttgtcaaatcgtgtcacgatt 4731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19945674 - 19945717
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtg 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  19945674 ctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtg 19945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 40221334 - 40221257
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| ||||||||| |||||| ||||| |||||||||||||||| | || |||||||||  ||||||||||||||    
T  40221334 cacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaa-cgtgtccaacaagctgaaaatcgtgtcacg 40221257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 4731509 - 4731371
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcg-tcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacc 102  Q
    ||||||||||||||||||| |||||| ||  || ||||||||||||||||| ||  ||| ||| |||  ||| ||| ||||  ||||||||||||||| |    
T  4731509 caaagaacacttatatagtagtcttcagctatcaaaatcgtgtcacgttttgcca-aatcgtgacacagttggtgcctacggcccaaggtacgaccaatc 4731411  T
Q  103 ttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 143  Q
    |||| ||||||| | || ||| |||||| |||||| |||||    
T  4731410 ttattctgaaaa-cgtgtccagcaagccgaaaatcatgtca 4731371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 7412836 - 7412915
Alignment:
Q  142 cacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||| ||| ||||| |||||||||| || |||||| | ||| ||||||||||  | ||||||||||||||||||||||    
T  7412836 cacgatttgacaccctgcaaaccagctcacggcattac-agaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 7412915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 34254812 - 34254858
Alignment:
Q  150 gacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||    
T  34254812 gacgccctgaaaac-agctctcgacattaccaaaatcatgtcacgatt 34254858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 19175445 - 19175370
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||| |||||||||  || ||| ||| |||||||| ||| ||||| ||||||||  |||||||||||||||||||    
T  19175445 aaatcgtatcacgtttt--ccaaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaa 19175370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 1345754 - 1345798
Alignment:
Q  72 ttgatgcgtacgatccaaggt--acgaccaaccttatcctgaaaa 114  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  1345754 ttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaa 1345798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 3051503 - 3051540
Alignment:
Q  180 caaaattgtgtcacgattgccaaa-tcgtgtcacgatt 216  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3051503 caaaattgtgtcacgattgccaaattcgtgtcacgatt 3051540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 22976019 - 22975986
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaacca 165  Q
    ||||||||||||||||||||| ||||||||||||    
T  22976019 aaaatcgtgtcacgattggacaccctgaaaacca 22975986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 22976119 - 22976027
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||| ||| |||| ||||||| |||||||||||||||| |||| | | |||||  ||||||||||||||    
T  22976119 tttcccgaatcgtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaa-cttgtcaagcaagctgaaaatcgtgtcacg 22976027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 4733528 - 4733445
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    |||||||||||||||||| || ||||| ||| |||||| |||||||  | |||| ||| |||  |||||||||||||||| ||||    
T  4733528 aaaatcgtgtcacgattgaacaccctggaaaacagctcacgacatt-gcgaaatcgtgacacagttgccaaatcgtgtcatgatt 4733445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5260637 - 5260833
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||    
T  5260637 ctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcatgtttttccccaatcgtgccacaattgatgcgtacgatccaaagtacgaccaa 5260736  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5260737 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 5260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 7762117 - 7761878
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  7762117 tgcaaagaacacttatatagcagtcttcagcgtctaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaac 7762018  T
Q  102 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgt--------------------cacgattggacgccctgaaaaccagctctcgacattacca 181  Q
    |||||||||||||||||||||| |||||||||||||||||                    ||||||||||||||||||||| ||||||| || |||||||    
T  7762017 cttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgtttcccaaaatcgtgtcacgattggacgccctgaaaa-cagctcttgatattacca 7761919  T
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||| |||| |||||||||||||||||||||||||||    
T  7761918 aaatagtgacacgcttgccaaatcgtgtcacgatttctctg 7761878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 45095019 - 45094871
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgt-cgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||   ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  45095019 ctgcaaagaacacttatatagcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgtacgttccaaggtacgacca 45094920  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45094919 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 45094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9636442 - 9636589
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9636442 ctgcaaagaacacttatatagctgccttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaa 9636541  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  9636542 ccttatcctgaaaatcttgtccatcaagccaaaaatcgtgtcatgatt 9636589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5258458 - 5258605
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||| || |||||||||||| ||||||||||||||    
T  5258458 ctgcaaagaacacgtatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaatcgatgcgtacgattcaaggtacgaccaa 5258557  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5258558 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatt 5258605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 7764305 - 7764065
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||||  |||||| || || |||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  7764305 tgcaaagaacacttatatagcagtcttcagcatctaaatcgtgtcacgtttttccccaatcatgtcacgattgatgcgtacgacccaaggtacgaccaac 7764206  T
Q  102 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgt---------------------cacgattggacgccctgaaaaccagctctcgacattacc 180  Q
    |||||||| |||||||||||||||||||||||||||||||                     ||||||||||||||||||||| ||||||||| |||||||    
T  7764205 cttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgaaaa-cagctctcgccattacc 7764107  T
Q  181 aaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||| | ||| |||| |||||||||||||||||||||||||||    
T  7764106 aaactcgtgacacgcttgccaaatcgtgtcacgatttctctg 7764065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 3393309 - 3393219
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  3393309 aaaatcgtgtcacgattggacgcactaaaaaccagctctcgacattaccaaaatcgtgtcgcgattgccaaatcgtgttacgatttctctg 3393219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 29812914 - 29812774
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcg-tcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacc 102  Q
    ||||||||||||||||||  |||||| ||| || ||||||||||||||||||||  ||| ||| |||| ||| ||||||||| |||||||||||||||||    
T  29812914 caaagaacacttatatagcagtcttcagcggtcaaaatcgtgtcacgtttttcca-aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacc 29812816  T
Q  103 ttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||| |||||||| |||| ||||||||||||||||    
T  29812815 ttatcctgaaaa-cttgcccagcaagacaaaaatcgtgtcacg 29812774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 29810721 - 29810588
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| ||||||||| |||||||||||||||    
T  29810721 tgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaa 29810623  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||||| ||| ||| ||||||||||||    
T  29810622 ccttatcctgaaaat-ttgtccagcaagccaaaaat 29810588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40734352 - 40734239
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| |||| ||||||||||| |||  ||| ||| |||||||||||||||||||||||||||||||||    
T  40734352 ctgcaaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgtcca-aatcgtgacacgattgatgcgtacgatccaaggtacgacca 40734254  T
Q  100 accttatcctgaaaa 114  Q
    |||||||||||||||    
T  40734253 accttatcctgaaaa 40734239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 3393394 - 3393314
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3393394 cacgattgatgtgtacgatcctaggtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatt 3393314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 31340610 - 31340715
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||| ||||||| ||| ||  ||| |||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  31340610 aaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccaacaagccgaaaat 31340708  T
Q  137 cgtgtca 143  Q
    |||||||    
T  31340709 cgtgtca 31340715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 5258610 - 5258675
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  5258610 aaaatcgtgtcacgattggacgccttgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 5258675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 4569550 - 4569444
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||||||| || |||  ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  4569550 aaatcgtgtcacgtttt-ccacaaccgtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaat 4569453  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  4569452 cgtgtcacg 4569444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 40592516 - 40592408
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||| |||  ||| ||| |||||||| || ||||||||||||||||||||||||||    
T  40592516 aagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgatccaaggtacgaccaacctt 40592418  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  40592417 atcctgaaaa 40592408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 30709531 - 30709423
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| ||||||||||||||||||||  ||| ||| |||||||| ||||||||| |||||||| |||||| |||    
T  30709531 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttcca-aatcgtgacacgattggtgcgtacgacccaaggtaagaccaatctt 30709433  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  30709432 atcctgaaaa 30709423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 40912922 - 40912830
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||    
T  40912922 tttcccaaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaa-cttgcccaacaagccgaaaatcgtgtcacg 40912830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 48438567 - 48438675
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||  |||||||||||||||| |||  ||| ||| |||||||| ||||||||||||||||||| |||||||||    
T  48438567 aagaacacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgatccaaggtacaaccaacctt 48438665  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  48438666 atcctgaaaa 48438675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 55302548 - 55302640
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  55302548 tttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtatcacg 55302640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 5236808 - 5236914
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||||||| ||  ||| ||| |||| ||| ||||||||| ||||||||||||||| ||||||||||||| ||| |||| |||||| |||||    
T  5236808 aaatcgtgtcacgttttgcca-aatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaa-ctttcccagcaagccgaaaat 5236905  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  5236906 cgtgtcacg 5236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 43404302 - 43404408
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| ||||||||||||| ||||||||||||||| ||||| || |||||| |||||    
T  43404302 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaa-cttgctcagcaagccgaaaat 43404399  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  43404400 cgtgtcacg 43404408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 45094860 - 45094802
Alignment:
Q  138 gtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  45094860 gtgtcacgattggacgccctgaaaac-agctctcgacattaccaaaatcgtgtcacgatt 45094802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 1736038 - 1735929
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||| |||  ||| ||| |||||||| ||||||| | |||||||||||||||||||    
T  1736038 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaacctt 1735940  T
Q  105 atcctgaaaat 115  Q
    ||||| |||||    
T  1735939 atcctaaaaat 1735929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 16264701 - 16264808
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| ||||||||||||| |||  || ||| ||| |||||||| ||||||| | |||||||||||||||||||    
T  16264701 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgcttt--ccaaatcgtggcacgattggtgcgtaccacccaaggtacgaccaacctt 16264798  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  16264799 atcctgaaaa 16264808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 24694900 - 24694685
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| |  ||| ||||||||| |||||| |||  ||| ||| |||||||| ||||||| | |||||||||||||||||||    
T  24694900 aagaacacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaacctt 24694802  T
Q  105 atcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctg-aaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa 203  Q
    |||||||||| | || ||| ||||  ||||||||||  |||||||||| ||||| |||||  |||| |||||||  |||||| ||| |||| |    |||    
T  24694801 atcctgaaaa-cgtgtccagcaagttaaaaatcgtgatacgattggacaccctgcaaaacatgctcacgacatt-gcaaaatcgtgacacgttgatgaaa 24694704  T
Q  204 tcgtgtcacgatttctctg 222  Q
    |||| ||||||||||||||    
T  24694703 tcgtatcacgatttctctg 24694685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 34490802 - 34490725
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  34490802 cacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cttgcccaataagccgaaaatcgtgtcacg 34490725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 6096207 - 6096275
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||    
T  6096207 tgcgtacgacccaaggtacgaccaaccttatcctgaaaat-ttgtccaataagccgaaaatcgtgtcacg 6096275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 36029445 - 36029553
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||| ||||||||||||||   ||  ||| |||||||| ||||||||| |||||||||||||||||||    
T  36029445 aagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttcta-aaccgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 36029543  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  36029544 atcctgaaaa 36029553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 43402373 - 43402465
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||| ||||| ||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  43402373 tttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcacg 43402465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 47923606 - 47923530
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||| |||  ||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||    
T  47923606 aaatcgtgtcacgtttgtcca-aatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctgaaaa 47923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 49200058 - 49200126
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||| |||||| ||||||||||||||    
T  49200058 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-catgcccagcaagccgaaaatcgtgtcacg 49200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 27027064 - 27027165
Alignment:
Q  12 acttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 110  Q
    ||||||||||  |||||| || ||| |||||||||||||||||  || ||  ||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  27027064 acttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaacgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 27027161  T
Q  111 aaaa 114  Q
    ||||    
T  27027162 aaaa 27027165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 44331348 - 44331281
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    ||||||||| ||||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||    
T  44331348 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtacccagcaagccaaaaatcgtgtcac 44331281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 37726059 - 37726134
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  37726059 aaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaa 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 39032289 - 39032182
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||   ||||| || ||| ||||||||||||| |||||   ||| ||| |||||||| ||||||||| |||||||||||||||| ||    
T  39032289 aagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacgattttca--aatcgtggcacgattggtgcgtacgacccaaggtacgaccaacttt 39032192  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  39032191 atcctgaaaa 39032182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 27038448 - 27038501
Alignment:
Q  61 ttgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  27038448 ttgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 27038501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 27986154 - 27986103
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  27986154 gtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaa 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 33386353 - 33386302
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  33386353 gtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaa 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 37408247 - 37408200
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  37408247 cacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 40735217 - 40735170
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  40735217 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 40735170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 46173303 - 46173241
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagcc 130  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  46173303 cacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagcc 46173241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 8370191 - 8370116
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||||  || ||| ||| |||||||| ||||||| | |||||||||||||||||||||||| ||||    
T  8370191 aaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaa 8370116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 37726173 - 37726262
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||| ||| ||||| |||||||||| || ||| | |||||| ||||||||||  | || |||||||||||||||||||    
T  37726173 aaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatca-caaaatcgtgtcacgatatcaaattcgtgtcacgatttctctg 37726262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 145
Target Start/End: Complemental strand, 54593289 - 54593197
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||| |||| |||||||||||||||||||||||| | |||||| ||||   ||||||||||||||    
T  54593289 tttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cgtgcccagcaagttgaaaatcgtgtcacg 54593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 9634816 - 9634856
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  9634816 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 53921860 - 53921946
Alignment:
Q  63 gtgtcacgattgatgcg--tacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||||||||| |||| | ||||    ||||||||||||||||||    
T  53921860 gtgtcacgattgatgcgcatacgactcaaggtacgaccaaccttatcctgaaaa-cttgtcaaacatattaaaaatcgtgtcacgatt 53921946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 21711614 - 21711661
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  21711614 cacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaa 21711661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 27453365 - 27453416
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  27453365 gtgtcacgattgatacgtacgtcacaaggtacgaccaaccttatcctgaaaa 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 27974629 - 27974578
Alignment:
Q  64 tgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaat 115  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||| |||||||    
T  27974629 tgtcacgattgatacgtacgacccaaggtacaaccaaccttatcatgaaaat 27974578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 33386263 - 33386174
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    ||||||||||||||||| | | ||||| |||||||||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  33386263 aaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 33386174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 8126985 - 8127090
Alignment:
Q  9 aacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatc 107  Q
    |||||||||||||  ||||||  | ||| |||||||||||||||| |||  ||| ||| |||| ||| || |||||| ||||| ||||||||||||||||    
T  8126985 aacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatc 8127083  T
Q  108 ctgaaaa 114  Q
    |||||||    
T  8127084 ctgaaaa 8127090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 23198405 - 23198493
Alignment:
Q  133 aaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||||||||||| | | ||||| |||||||||| || ||| || ||||| ||||||||||  | || |||||||||||||||||||    
T  23198405 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctg 23198493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 40845037 - 40845113
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||| ||||||||||| |||  ||| ||| |||||||| ||||||| | |||||||||||||||||||||||| ||||    
T  40845037 aaattgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaa 40845113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 34490717 - 34490634
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||||||  ||||| ||| || |||||||||||  | |||| ||| |||| |||||||||||||||| ||||    
T  34490717 aaaatcgtgtcacgattggataccctgcaaaacatctctcgacatt-gcgaaatcgtgacacggttgccaaatcgtgtcatgatt 34490634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 25929058 - 25929023
Alignment:
Q  78 cgtacgatccaaggtacgaccaaccttatcctgaaa 113  Q
    |||||||||||| |||||||||||||||||||||||    
T  25929058 cgtacgatccaatgtacgaccaaccttatcctgaaa 25929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 9636601 - 9636658
Alignment:
Q  139 tgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||| ||||| |  ||||||||||||| |||| ||||||    
T  9636601 tgtcacgattggacgccctgaaaa-cagcttttaacattaccaaaatcgtgttacgatt 9636658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 23200604 - 23200692
Alignment:
Q  133 aaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||||| | | ||||| |||||||||| |  ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  23200604 aaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 23200692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 37408160 - 37408076
Alignment:
Q  134 aatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca-aatcgtgtcacgatttct 219  Q
    ||||||| ||||||| ||| ||||| |||||||||| || || ||| ||||| |||||||||| |||| ||||||||||||||||||    
T  37408160 aatcgtgccacgatttgacaccctgcaaaccagctcacggcactac-aaaatcgtgtcacgat-gccacaatcgtgtcacgatttct 37408076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 26928200 - 26928117
Alignment:
Q  138 gtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    ||||||||||| | | ||||| |||||||||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  26928200 gtgtcacgatttggcaccctgcaaaccagctcacggcataac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 26928117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 39153745 - 39153789
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcc 108  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  39153745 gtgtcacgattgatgagtacgacccaaggtacga-caaccttatcc 39153789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 7167806 - 7167846
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  7167806 aaattgtgtcacgatgccaaaatcgtgtcacgatttctctg 7167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 9e-91; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 4503446 - 4503642
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  4503446 ctgcaaagaacacttatatagttgtcttctacgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacgatccaaggtacgaccaa 4503545  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4503546 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 4503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 36205977 - 36206199
Alignment:
Q  1 ctgcaaagaacacttatata--gttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacc 98  Q
    ||||||||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||    
T  36205977 ctgcaaagaacacttatatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatgcgtacaatccaaggtacgacc 36206076  T
Q  99 aaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattg 198  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  36206077 aaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacgattagacg-cctgaaaaccagctctcgacattaccaaaatcgtgtcacgattg 36206175  T
Q  199 ccaaatcgtgtcacgatttctctg 222  Q
    ||||||| ||||||||||||||||    
T  36206176 ccaaatcatgtcacgatttctctg 36206199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 2334731 - 2334951
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||    
T  2334731 ctgcaaagaacacttatatagcagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaa 2334830  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||| ||| || | |||||    
T  2334831 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattggaccgcctgaaga-cagctctcgacattaccaaaatcgtgacatgcttgcc 2334929  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||||| ||||||||||||||    
T  2334930 aaatcgtatcacgatttctctg 2334951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5723568 - 5723760
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  5723568 ctgcaaagaacatttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa 5723667  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||    
T  5723668 ccttatcctgaaaatcttgtccagcaagccaaaaatcgtgtcacgattggacgc---gaaaa-cagctctcgacattaccaaaattgtgtcacgatt 5723760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 45099606 - 45099466
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacct 103  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  45099606 caaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgattcaaggtacgaccaacct 45099507  T
Q  104 tatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  45099506 tatcctgaaaatcttgcccagcaagccaaaaatcgtgtcac 45099466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 36988390 - 36988630
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||||  |||||| ||||| |||||||||||| |||| |  |||| ||||||| |||||||||||||| ||||||||||||||||    
T  36988390 tgcaaagaacacttatatagcagtcttcagcgtcaaaatcgtgtcacattttccatcaatcgtgtcacaattgatgcgtacgacccaaggtacgaccaac 36988489  T
Q  102 cttatcctgaaaatcttgcccaacaag---------------------ccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattacc 180  Q
    ||||||||||||| |||||||| ||||                     || |||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  36988490 cttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacaccctgaaaa-cagctctcgacattacc 36988588  T
Q  181 aaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||| ||| |||| |||||||||||| ||||||||||||||    
T  36988589 aaaatcgtgacacgcttgccaaatcgtctcacgatttctctg 36988630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 29867582 - 29867493
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29867582 aaaatcgtgtcacgattggacaccctgaaaacaa-ctctcgacattaccaaaatcgtgtcacgcttgccaaatcgtgtcacgatttctctg 29867493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 36318323 - 36318466
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| |||||||||||||||||  |  ||||||| |||| ||| |||||||||| |||||||||||||    
T  36318323 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgtca-aattgtgacacggttggtgcgtacgattcaaggtacgacca 36318421  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| | || ||| |||||| ||||||||||||||    
T  36318422 accttatcctgaaaa-cgtggccagcaagccgaaaatcgtgtcacg 36318466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 34389349 - 34389438
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||    
T  34389349 aaaatcgtgtcacgattggacaccctgaaaacaa-ctctcgacattaccaaaatcgtgacacgcttgccaaatcgtgtcatgatttctctg 34389438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 34389203 - 34389310
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||||  || ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  34389203 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 34389300  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  34389301 atcctgaaaa 34389310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 20522606 - 20522712
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    |||||||||||||||| |||  ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||| ||||   |||||    
T  20522606 aaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagcaagttgaaaat 20522703  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  20522704 cgtgtcacg 20522712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6595320 - 6595452
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  ||||||  |||| ||||||||||||||||| |  |||| |||||| |||||||||            ||||||| ||    
T  6595320 ctgcaaagaacacttatatagcagtcttcaacgtcaaaatcgtgtcacgttttccatcaatcgtgtcaagattgatgc------------gtacgactaa 6595407  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  6595408 ccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacg 6595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 2837161 - 2837301
Alignment:
Q  4 caaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacc 102  Q
    ||||||||||||||||||  |||||| || ||| ||||||||| ||||||| ||| |||  || |||| ||| ||||||||| |||||||||||||||||    
T  2837161 caaagaacacttatatagcagtcttcagctgtcaaaatcgtgttacgtttt-cccaaatcatgacacgtttggtgcgtacgacccaaggtacgaccaacc 2837259  T
Q  103 ttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||| ||| |||| ||||   ||||||||||||||    
T  2837260 ttatcctgaaaa-cttacccagcaaggtgaaaatcgtgtcacg 2837301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 40015314 - 40015400
Alignment:
Q  62 tgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 149  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||| | || | | || ||||||||||||||||||||||    
T  40015314 tgtgtcacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaa-cgtgtcaatcatgccaaaaatcgtgtcacgattg 40015400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 28258890 - 28258815
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  28258890 aaatcgtgccacgtttt--ccaaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 13569682 - 13569789
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||| |||||| || ||| |||||||||||  |||||||  ||| ||| |||||||| ||| ||||||||||||||||| |||||||    
T  13569682 aagaacacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttcca-aatcgtgacacgattggtgcttacgatccaaggtacga-caacctt 13569779  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  13569780 atcctgaaaa 13569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 10706997 - 10706890
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||||  || ||  ||| |||||||| || |||||| |||||||||||||||||||    
T  10706997 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaccgtggcacgattggtgtgtacgacccaaggtacgaccaacctt 10706900  T
Q  105 atcctgaaaa 114  Q
    ||||| ||||    
T  10706899 atccttaaaa 10706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 21630297 - 21630433
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||  || ||| |||||||||||||||| |||  ||| ||| |||||||| || |||||| |||| ||||||||||||||    
T  21630297 aagaacacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgacccaaagtacgaccaacctt 21630395  T
Q  105 atcctgaaaatcttgcccaacaagccaaaaatcgtgtca 143  Q
    |||||||||| | |||||| ||||   ||||||||||||    
T  21630396 atcctgaaaa-cgtgcccagcaagttgaaaatcgtgtca 21630433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 23078216 - 23078109
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  ||||||  | ||| |||| ||||||||||||  || ||| ||| |||||||| ||||||||| ||||| |||||||||||||    
T  23078216 aagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgtttt--ccaaatcgtggcacgattggtgcgtacgacccaagatacgaccaacctt 23078119  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  23078118 atcctgaaaa 23078109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 38312058 - 38311996
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacg 194  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||| ||||    
T  38312058 aaaatcgtgtcacgattggacaccctgcaaaacagctctcgacattaccaaaatcgtgacacg 38311996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 14698684 - 14698616
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||||   ||||||||||||||    
T  14698684 tgcgtacgacccaaggtacgaccaaccttatcctgaaaat-gtgcccaacaagttgaaaatcgtgtcacg 14698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 35447453 - 35447557
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| |||  |||||| ||| |||| ||| ||||||||| ||||||||||| |||||||||| |||||| ||||||| |||| || | |||    
T  35447453 aaatcgtgtcacgattt--cccaatcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaa-cttgcccgacaaaccgataat 35447549  T
Q  137 cgtgtcac 144  Q
    ||||||||    
T  35447550 cgtgtcac 35447557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 17865590 - 17865637
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  17865590 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 17865637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 45099451 - 45099392
Alignment:
Q  138 gtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||| |||| ||||||||||||||||| |||| |||| |||||||||||    
T  45099451 gtgtcacgattggacaccctaaaaaccagctctcgacaataccgaaatcgtgtcacgatt 45099392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 33118487 - 33118596
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| |  ||| ||||||||||| |||| |||  ||| ||| |||||||| ||||||||| |||||||||| ||||||||    
T  33118487 aagaacacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacggccaacctt 33118585  T
Q  105 atcctgaaaat 115  Q
    ||| |||||||    
T  33118586 atcttgaaaat 33118596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 33528337 - 33528261
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||| |||  ||| ||| |||||||| ||||||||| ||||||||||| ||||||||| |||||||    
T  33528337 aaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaa 33528261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 39483289 - 39483336
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||    
T  39483289 cacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaaaa 39483336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29867723 - 29867641
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtac 82  Q
    |||||||||||||||||||||  ||||||  | ||| ||||||||||||||||||||| ||| ||| |||| ||| |||||||    
T  29867723 ctgcaaagaacacttatatagcagtcttcatctgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtttggtgcgtac 29867641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 6595460 - 6595524
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||| ||||||||||||||| ||||||||| ||||| |||| ||||||||||| ||| |||||||    
T  6595460 aaaattgtgtcacgattggacaccctgaaaa-cagctatcgatattaccaaaatcgtgacacgatt 6595524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 8389862 - 8389786
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||||| ||||||||  |||  || || ||||| ||||||||| |||||||||| ||||||||||||||||||    
T  8389862 aaatcgtgtcatgtttttcca-aatcatgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctgaaaa 8389786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 11690282 - 11690239
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatc 107  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||    
T  11690282 gtgtcacgattgatgagtacgatccaaggtacga-caaccttatc 11690239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 17863955 - 17863903
Alignment:
Q  93 acgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||||| |||| |||||||| ||||  |||||||||||||||    
T  17863955 acgaccaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacg 17863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 36318472 - 36318559
Alignment:
Q  129 ccaaaaatcgtgtcacgattggacgccctg-aaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    |||||||||||||||||||||||| ||||| |||||  ||||||||||||  | |||| ||| |||| ||  |||||||||||||||||    
T  36318472 ccaaaaatcgtgtcacgattggacaccctgcaaaacatgctctcgacatt-gcgaaatcgtgacacgtttcacaaatcgtgtcacgatt 36318559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 39284661 - 39284608
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||| ||| |||| |||||| ||||| ||||||||    
T  39284661 gtacgaccaaccttatcctgaaaa-ctttcccagcaagccgaaaattgtgtcacg 39284608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 17057725 - 17057810
Alignment:
Q  138 gtgtcacgattggacgccctgaaaacca-gctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||| ||||| ||| || |||||||||||| ||||||  ||| |||| ||   |||| |||||||||||||||||    
T  17057725 gtgtcacgattggacaccctgcaaaacatgctctcgacattgccaaaaacgtgacacgcttatgaaattgtgtcacgatttctctg 17057810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 17085708 - 17085793
Alignment:
Q  138 gtgtcacgattggacgccctgaaaacca-gctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||| ||||| ||| || |||||||||||| ||||||  ||| |||| ||   |||| |||||||||||||||||    
T  17085708 gtgtcacgattggacaccctgcaaaacatgctctcgacattgccaaaaacgtgacacgcttatgaaattgtgtcacgatttctctg 17085793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 3492254 - 3492340
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| | |||||| ||||||||| ||||||| ||||||||| |||||||||    
T  3492254 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-caaaatcgtgtcacga-tgccaaattcgtgtcacaatttctctg 3492340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 6266398 - 6266315
Alignment:
Q  134 aatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttc 218  Q
    ||||||||||||||| | | ||||| |||||||||| || ||| || ||| ||||||||||||  | || |||||||||||||||    
T  6266398 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaa-ttgtgtcacgatgtcaaattcgtgtcacgatttc 6266315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 25410143 - 25410229
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||| ||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  25410143 atcgtgtcacgatttggcaccctgcaaaccatctcacggcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 25410229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 32247276 - 32247316
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 32247316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 32289271 - 32289185
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    ||||||||| |||| | | ||||| |||||||||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  32289271 atcgtgtcaagatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 32289185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 40739334 - 40739420
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || || || |||||| ||||||||| ||||||| |||||||||||||| ||||    
T  40739334 atcgtgtcacgatttggcaccctgcaaaccagctcacggca-taacaaaatcgtgtcacga-tgccaaattcgtgtcacgatttgtctg 40739420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 30834850 - 30835047
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttt-tccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||    
T  30834850 ctgcaaagaacacttatatagttgtcttctgtgtcaaaatcgtgtcacgttttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgacca 30834949  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  30834950 accttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgttacgatt 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 216
Target Start/End: Original strand, 16452759 - 16452968
Alignment:
Q  6 aagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctta 105  Q
    |||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  16452759 aagaacacttatatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaacctta 16452858  T
Q  106 tcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatc 205  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  16452859 tcctgaaaatctttcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaa-cagctctcgacattacctaaatcgtgtcacgattgccaaatc 16452957  T
Q  206 gtgtcacgatt 216  Q
     ||||||||||    
T  16452958 atgtcacgatt 16452968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5406512 - 5406708
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||| |||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  5406512 ctgcaaataacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa 5406611  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5406612 ccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 5406708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5410837 - 5411033
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||| |||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  5410837 ctgcaaataacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa 5410936  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5410937 ccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 5411033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33160668 - 33160888
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  |||||| ||||| |||| |||||||||||| |  |||| |||||||||||||||||||||| |||| ||||||||||    
T  33160668 ctgcaaagaacacttatatagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaa 33160767  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||| |||| |||||    
T  33160768 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattggacaccctgaaaa-cagctcttgacattaccaaaatcgtgacacgcttgcc 33160866  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||||    
T  33160867 aaatcgtgtcacgatttctctg 33160888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 5413807 - 5413982
Alignment:
Q  46 cacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5413807 cacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 5413906  T
Q  146 attggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||| ||||||| |||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||    
T  5413907 attggacgctctgaaaa-cagctctcgacattatgaaaatcgtgtcacgattaccaaatcgtgtcacgatttctctg 5413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 31404988 - 31405183
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||||    
T  31404988 ctgcaaataacacttatatagctgtcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacctaaggtacgaccaa 31405087  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||| |||| |||| ||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||    
T  31405088 ccttatcctgaaagtctttcccagcaagccaaaaaacgtgtcacgattggacgcactgaaaa-caactctcgacattaccaaaatcgtgtcacgatt 31405183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5411547 - 5411782
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||   ||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  5411547 ctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa 5411646  T
Q  101 ccttatcctgaaaatcttgcccaacaagcca---------------------aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattac 179  Q
    ||||||| ||||||||||||||| |||||||                     ||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  5411647 ccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacgattggacactctgaaaa-cagctctcgacattac 5411745  T
Q  180 caaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    |||||| ||||||||||||| |||| |||||||||||    
T  5411746 caaaatcgtgtcacgattgcaaaatggtgtcacgatt 5411782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5407222 - 5407457
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||   ||||| |||||||||||||||||| ||||||  |||| |||||||||||||||||||||| |||||||||||||||    
T  5407222 ctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacatttttcttcaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaa 5407321  T
Q  101 ccttatcctgaaaatcttgcccaacaagcca---------------------aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattac 179  Q
    ||||||| ||||||||||||||| |||||||                     ||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  5407322 ccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacgattggacactctgaaaa-cagctctcgacattac 5407420  T
Q  180 caaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    |||||| ||||||||||||| |||| |||||||||||    
T  5407421 caaaatcgtgtcacgattgcaaaatggtgtcacgatt 5407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16452643 - 16452758
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||    
T  16452643 ctgcaaagaacacttatatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccatgattgatgcgtacgacccaaggtacgaccaa 16452742  T
Q  101 ccttatcctgaaaatc 116  Q
    ||||||||||||||||    
T  16452743 ccttatcctgaaaatc 16452758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22964045 - 22964188
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||||||| |||| |||  ||||||||| |||||||||||||    
T  22964045 ctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacgtttt-cccaaattgtgacacgtttggcgcgtacgatacaaggtacgacca 22964143  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||    
T  22964144 accttatcctgaaaa-cttgtccagcaagccaaaaatcgtgtcacg 22964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 23824348 - 23824205
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||||||| |||| |||  ||||||||| |||||||||||||    
T  23824348 ctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacgtttt-cccaaattgtgacacgtttggcgcgtacgatacaaggtacgacca 23824250  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||    
T  23824249 accttatcctgaaaa-cttgtccagcaagccaaaaatcgtgtcacg 23824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 9183386 - 9183467
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  9183386 gtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagtcaaaaatcgtgtcacg 9183467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 31086219 - 31086110
Alignment:
Q  6 aagaacacttatatagttgtcttctgcg-tcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| ||  || |||||||||||||||||| || ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  31086219 aagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 31086120  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  31086119 atcctgaaaa 31086110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 18234435 - 18234543
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  18234435 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 18234533  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  18234534 atcctgaaaa 18234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 5017241 - 5017133
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||| ||||| |  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  5017241 aagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 5017143  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  5017142 atcctgaaaa 5017133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 603617 - 603694
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| ||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| |||||| |||||||    
T  603617 cacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaa-cttgcccagcaagccgaaaatcatgtcacg 603694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 10076901 - 10076828
Alignment:
Q  40 tcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  10076901 tcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 10076828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5413706 - 5413775
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacg 70  Q
    |||||||||||||||||||||   ||||| ||||||||||||||| ||||||||||||||| ||| ||||    
T  5413706 ctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtaacgtttttccccaatcgtgccacg 5413775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 21272673 - 21272593
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||| | |||| |||| | ||||||||||| |||||||    
T  21272673 cacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaa-cgtgccaaacatgtcaaaaatcgtgacacgatt 21272593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 21593265 - 21593159
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    |||||||||||| |||| ||| ||| ||| |||| ||| | || |||| |||||||||||||||||||||||| |||| | |||||| |||||| |||||    
T  21593265 aaatcgtgtcacatttt-cccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcct-aaaaacatgcccagcaagccgaaaat 21593168  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  21593167 cgtgtcacg 21593159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 26954683 - 26954731
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaat 115  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  26954683 cacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaat 26954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 5571952 - 5571871
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||| |||| | |||||| ||||   ||||||||||||||    
T  5571952 gtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacct-aaaaacgtgcccagcaagttgaaaatcgtgtcacg 5571871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 5407440 - 5407481
Alignment:
Q  180 caaaattgtgtcacgattgccaaatcgtgtcacgatttctct 221  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  5407440 caaaatggtgtcacgattgccaaatcgtgtcacgatttctct 5407481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 5411765 - 5411806
Alignment:
Q  180 caaaattgtgtcacgattgccaaatcgtgtcacgatttctct 221  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  5411765 caaaatggtgtcacgattgccaaatcgtgtcacgatttctct 5411806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 9183507 - 9183564
Alignment:
Q  165 agctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| |||||||||||||||| ||| |||| |||||||||||||||| ||||||||||    
T  9183507 agctatcgacattaccaaaatcgtgacacgcttgccaaatcgtgtcatgatttctctg 9183564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 22964205 - 22964286
Alignment:
Q  141 tcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||| || ||||| ||| |||||||||||||||||||||| ||| ||||  |   ||||||||||||||||||||||    
T  22964205 tcacgattgaacaccctgcaaaacagctctcgacattaccaaaatcgtgacacgcctatgaaatcgtgtcacgatttctctg 22964286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 31979901 - 31979977
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||| |||  ||| ||| |||||||| |||||||||  ||| ||||||||||||||||||||||||    
T  31979901 aaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaa 31979977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 23896745 - 23896792
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  23896745 cacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaa 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 5757077 - 5756989
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca-aatcgtgtcacgatttctct 221  Q
    ||||||||  ||||||| ||| ||||| |||||| ||| ||||||||| |||||||||||||||| |||| ||||||||||| ||||||||    
T  5757077 aaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattac-aaaattgtgtcacgat-gccacaatcgtgtcacaatttctct 5756989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 5757191 - 5757116
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| ||| |||||||||| | ||||| | |||||||||||||||||||||||||||    
T  5757191 aaatcgtgccacgtttt--ccaaatcgtgccacgattgatacatacgaccaaaggtacgaccaaccttatcctgaaaa 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 16452959 - 16452993
Alignment:
Q  188 tgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||||||||||||||||||||||||||||||    
T  16452959 tgtcacgattgccaaatcgtgtcacgatttctctg 16452993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 24435656 - 24435579
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| ||||||| | ||||||||||||||||||||||||||||| | |||| ||||||   ||||||||||||||    
T  24435656 cacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaa-cgtgccaaacaagttgaaaatcgtgtcacg 24435579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 26661510 - 26661472
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26661510 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa 26661472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 26767481 - 26767443
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26767481 tgcgtacgacccaaggtacgaccaaccttatcctgaaaa 26767443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 3809318 - 3809381
Alignment:
Q  78 cgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||| ||||||||||||||||||||||||||||| ||| ||   |||||| ||||||||||||||    
T  3809318 cgtacgacccaaggtacgaccaaccttatcctgaaaa-ctttcc---caagccgaaaatcgtgtcacg 3809381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9183345 - 9183393
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacg 49  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||||||    
T  9183345 ctgcaaagaaaacttatatagtagtcttcagcgtcaaaatcgtgtcacg 9183393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 23824175 - 23824107
Alignment:
Q  154 ccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||| ||| |||||||||||||||||||||| ||| ||||  |   ||||||||||||||||||||||    
T  23824175 ccctgcaaaacagctctcgacattaccaaaatcgtgacacgcctatgaaatcgtgtcacgatttctctg 23824107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 23896831 - 23896920
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||  ||||||| ||| ||||| |||||| ||| ||| ||||| ||||| ||||||||||  | ||||||||||||||||| ||||    
T  23896831 aaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctg 23896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 28137796 - 28137840
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcc 108  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  28137796 gtgtcacgattgatgagtacgacccaaggtacga-caaccttatcc 28137840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 17759440 - 17759357
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    |||||||||||||| |||| | |||| |||  || ||||||||||| | ||||||||| |||| ||  |||||||||||||||||    
T  17759440 aaaatcgtgtcacggttgggcaccctaaaatacaactctcgacattgc-aaaattgtgacacgcttcacaaatcgtgtcacgatt 17759357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 5e-86; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 13316632 - 13316828
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  13316632 ctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgtacgatccaaggtacgaccaa 13316731  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13316732 ccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattagacgccctaaaaaccagctctcgacattaccaaaatcgtgtcacgatt 13316828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20762526 - 20762379
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||    
T  20762526 ctgcaaagaacacttatatagctgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgttcgatcaaaggtacgaccaa 20762427  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20762426 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 20762379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 3206838 - 3206599
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggt-acgaccaacc 102  Q
    ||||||||||||||||||   ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  3206838 caaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttcccaaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaacc 3206739  T
Q  103 ttatcctgaaaatcttgcccaacaag---------------------ccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattacca 181  Q
    ||||||| |||| |||||||| ||||                     || ||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  3206738 ttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacgccctgaaaa-caactctcgacattacca 3206640  T
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||| |||| ||||||||| |||||||||||||||||    
T  3206639 aaatcgtgacacgcttgccaaattgtgtcacgatttctctg 3206599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 20762374 - 20762309
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20762374 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 20762309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 3189053 - 3188964
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||    
T  3189053 aaaattgtgtcacgattggacgccctgaaaacaa-ctctcgacattaccaaaatcgtgacacgcttgccaaattgtgtcacgatttctctg 3188964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 3197870 - 3197781
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||    
T  3197870 aaaattgtgtcacgattggacgccctgaaaacaa-ctctcgacattaccaaaatcgtgacacgcttgccaaattgtgtcacgatttctctg 3197781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 30476762 - 30476918
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| || |||||| ||||||| | ||||    
T  30476762 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgtgtacgacccaaggttcaacca 30476860  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctg 158  Q
    |||||||| |||||| |||||||| ||| || ||||||||||||||||| ||| |||||    
T  30476861 accttatcttgaaaa-cttgcccagcaaaccgaaaatcgtgtcacgattagacaccctg 30476918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 49918203 - 49918060
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| |||||||||||| |||| ||| ||| ||| |||||||| || |||||| |||||||| |||||    
T  49918203 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacatttt-cccaaatcgtgacacgattggtgtgtacgacccaaggtatgacca 49918105  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| | |||||| ||||  |||||||||||||||    
T  49918104 accttatcctgaaaa-cgtgcccagcaagttaaaaatcgtgtcacg 49918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 11348289 - 11348212
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  11348289 cacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaa-cttgcccaacaagccgaaaatcgtgtcacg 11348212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 13598752 - 13598860
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||| ||||||||  |||||| || ||| |||||||||||||||| |||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  13598752 aagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 13598850  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  13598851 atcctgaaaa 13598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28223735 - 28223841
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||||||| |||| ||  ||||||||| ||||||||||||||    
T  28223735 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaattgtgacacgttttgtgcgtacgacccaaggtacgacca 28223833  T
Q  100 accttatc 107  Q
    ||||||||    
T  28223834 accttatc 28223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 31659092 - 31658949
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  ||||||  | ||| |||||||||||| |||| ||  ||| ||| |||| ||| ||||||||| ||||||||| ||||    
T  31659092 ctgcaaagaacacttatatagcagtcttcaactgtcaaaatcgtgtcacattttacca-aatcgtgacacgtttggtgcgtacgacccaaggtacaacca 31658994  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| ||| |||| ||||| |||||| ||||||||    
T  31658993 accttatcctgaaaa-ctttcccagcaagcaaaaaattgtgtcacg 31658949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28220540 - 28220646
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||  ||||||||| ||||||||||||||    
T  28220540 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgttttgtgcgtacgacccaaggtacgacca 28220638  T
Q  100 accttatc 107  Q
    ||||||||    
T  28220639 accttatc 28220646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 3189148 - 3189078
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggta-cgaccaaccttatcctgaaaatcttgcccaacaag 128  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||| ||||    
T  3189148 aattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaag 3189078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 3197965 - 3197895
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggta-cgaccaaccttatcctgaaaatcttgcccaacaag 128  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||| ||||    
T  3197965 aattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaag 3197895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 3282059 - 3282166
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||||||   ||| ||| |||||||| ||||||||| |||||||| ||||||||||    
T  3282059 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttca--aatcgtggcacgattggtgcgtacgacccaaggtatgaccaacctt 3282156  T
Q  105 atcctgaaaa 114  Q
    ||| ||||||    
T  3282157 atcttgaaaa 3282166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 13604335 - 13604260
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  13604335 aaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 21536315 - 21536208
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||||  || ||| | | |||||||| ||||||||| ||||||||||||||||||     
T  21536315 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcggggcacgattggtgcgtacgacccaaggtacgaccaacctc 21536218  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  21536217 atcctgaaaa 21536208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10925077 - 10924935
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||   |||||| || ||| ||||||||||||| |||| || ||| ||| |||| |||||||||| || |||||||| |||||    
T  10925077 ctgcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttgatgcgtatgacccaaggtatgacca 10924979  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    || ||||  |||||| |||||| | |||||| |||||||||||||    
T  10924978 actttattttgaaaa-cttgcctaccaagccgaaaatcgtgtcac 10924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 29652168 - 29652286
Alignment:
Q  9 aacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatc 107  Q
    |||||||||||||  |||||| || ||| ||||| |||||||||| |||  ||| ||| |||||||| || |||||| ||||||||||||||||||||||    
T  29652168 aacacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgtcca-aatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatc 29652266  T
Q  108 ctgaaaatcttgcccaacaa 127  Q
    ||||||| | | ||||||||    
T  29652267 ctgaaaaacgtacccaacaa 29652286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 46064710 - 46064620
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgc 154  Q
    |||||||| ||||| ||||||| |||||||||||||||| |||||||||||||  |||| | || |||||||||||||||||| ||| ||||    
T  46064710 gtgtcacggttgatacgtacgacccaaggtacgaccaactttatcctgaaaat-gtgccaagcatgccaaaaatcgtgtcacggttgaacgc 46064620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 16455438 - 16455353
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 149  Q
    |||||||| ||||||||||||| ||||||||||| ||| ||||||||||||| | |||| ||||  ||||||||| |||||||||||    
T  16455438 gtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaa-cgtgccaaacataccaaaaatcatgtcacgattg 16455353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 1833376 - 1833236
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||| ||||||||||  |||||| || ||| ||||||||||||||||| | | ||| ||| |||| ||| ||||||| | |||||||| |||||    
T  1833376 ctgcaaagaatacttatataggagtcttcagctgtcaaaatcgtgtcacgtttt-cgcaaatcgtgacacgtttggtgcgtacaacccaaggtatgacca 1833278  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 141  Q
    |||||||| ||||||   | | || |||||||||||||||||    
T  1833277 accttatcttgaaaaatgtactcagcaagccaaaaatcgtgt 1833236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 37070119 - 37070227
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||  || ||| ||||  ||||||| ||||||  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  37070119 aagaacacttatatagcagtctttagctgtcaaaattatgtcacgattttcca-aatcgtggcacgattggtgcgtacgacccaaggtacgaccaacctt 37070217  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  37070218 atcctgaaaa 37070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 44454938 - 44454870
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||| ||||||||| |||||||||||| |||||| |||||||| |||||| ||||||||||||||    
T  44454938 tgcgtacgacccaaggtacaaccaaccttatcttgaaaa-cttgcccagcaagccgaaaatcgtgtcacg 44454870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 49918052 - 49917969
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||||  |||||||||| |||| ||  |||||||||||||||||    
T  49918052 aaaatcgtgtcacgattgggcaccctgcaaaacagctctcgacatt-gcaaaattgtgacacgcttcacaaatcgtgtcacgatt 49917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 37033652 - 37033742
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 143  Q
    |||||| ||| ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||||| |||||||  |||| | ||||||||||||    
T  37033652 tttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cttgccctgcaaggcgaaaatcgtgtca 37033742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 29135838 - 29135762
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||| | |||||| |||||  |||||| ||||||    
T  29135838 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 193211 - 193105
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| | | |||| ||| ||||||||| ||||||||||||||| |||||||| |||| |||||||| |||||| |||||    
T  193211 aaatcgtgtcacgattt-cccaaatcgcgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcct-aaaaacttgcccagcaagccgaaaat 193114  T
Q  137 cgtgtcacg 145  Q
     || |||||    
T  193113 ggtatcacg 193105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 11348204 - 11348121
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||| ||| ||||| ||| ||||||||||||||  |||||| ||| |||| ||  |||||||||||||||||    
T  11348204 aaaatcgtgtcacgattagacaccctgcaaaacagctctcgacatt-gcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 11348121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 15820090 - 15820038
Alignment:
Q  72 ttgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaa 124  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| || |||||    
T  15820090 ttgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatgtttcccaa 15820038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 13604221 - 13604132
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||| ||| | ||| |||||||||| |||||| | |||||| ||| ||||||  |  |||||||||||||||||||||    
T  13604221 aaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatca-caaaatcgtgccacgataccacaatcgtgtcacgatttctctg 13604132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 31658941 - 31658852
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||||  |||||| ||| ||||  |   ||||||||||||||||||||||    
T  31658941 aaaatcgtgtcacgattgggcaccctgcaaaacagctctcgacatt-gcaaaatcgtgacacgcctatgaaatcgtgtcacgatttctctg 31658852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 13547671 - 13547766
Alignment:
Q  51 ttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||| ||| ||| |||| ||| ||||||||| |||||||||||||||||||||  |||||| | |||||| |||||  ||||| |||||||||||    
T  13547671 ttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaa-cgtgcccagcaagctgaaaattgtgtcacgatt 13547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 13549582 - 13549677
Alignment:
Q  51 ttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||| ||| ||| |||| ||| ||||||||| |||||||||||||||||||||  |||||| | |||||| |||||  ||||| |||||||||||    
T  13549582 ttttcccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaa-cgtgcccagcaagctgaaaattgtgtcacgatt 13549677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 19365891 - 19365805
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  19365891 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 19365805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 3156636 - 3156582
Alignment:
Q  86 ccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 141  Q
    ||||||||||||||||||||||||||||| | || ||| ||| |||||||||||||    
T  3156636 ccaaggtacgaccaaccttatcctgaaaa-cgtgtccagcaaaccaaaaatcgtgt 3156582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 19361035 - 19360949
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||||| ||||||||||  | || |||||||||||||||||||    
T  19361035 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgataccaaattcgtgtcacgatttctctg 19360949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 22819835 - 22819890
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||| | ||||||||||| ||||||||||||||| ||||| |||||||    
T  22819835 aattgtgttacggtcgatgcgtacgacccaaggtacgaccaaacttattctgaaaa 22819890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 24202377 - 24202288
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    ||||||||||||||||| | | ||||| |||||||||| || ||| | | |||| ||||||||| ||||||| |||||||||||||||||||    
T  24202377 aaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctg 24202288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 114
Target Start/End: Complemental strand, 16124325 - 16124297
Alignment:
Q  86 ccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||||||||||||||||    
T  16124325 ccaaggtacgaccaaccttatcctgaaaa 16124297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 25439475 - 25439435
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||| |||||||||||||||||| |||||    
T  25439475 aaatcgtgtcacgattaccaaatcgtgtcacgattgctctg 25439435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 25444668 - 25444628
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||| |||||||||||||||||| |||||    
T  25444668 aaatcgtgtcacgattaccaaatcgtgtcacgattgctctg 25444628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 37879498 - 37879565
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    ||||| ||| |||||||||||||||||||||||| |||| |||| |||  ||||  |||||||||||||    
T  37879498 tgcgtgcgacccaaggtacgaccaaccttatcct-aaaaacttgtccagtaagctgaaaatcgtgtcac 37879565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 37879574 - 37879657
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||||  | ||||| ||| || |||||||||||  |||||| ||| |||| ||  |||||||||||||||||    
T  37879574 aaaatcgtgtcacgattgagcaccctgcaaaacaactctcgacatt-gcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 37879657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 39446006 - 39446046
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  39446006 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 39446046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 41391109 - 41391149
Alignment:
Q  182 aaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  41391109 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctg 41391149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 24515074 - 24515270
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  24515074 ctgcaaagaacacttatatagctgtcttctgcgtctaaatcgtgtcgcgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgaccaa 24515173  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  24515174 ccttatcctgaaaatcttgcccagcaagccaaaaattgtgtcacgattggacgccctgaaaaccagctctcgacattattaaaatcgtgtcacgatt 24515270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 35853769 - 35853571
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgttttt--ccccaattgtgtcacgattgatgcgtacgatccaaggtacgacc 98  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  | ||||| ||| ||||||||||||||||||||||||||||||||    
T  35853769 ctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttttctccaatcgtgccacgattgatgcgtacgatccaaggtacgacc 35853670  T
Q  99 aaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
     ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35853669 gaccttatcctgaaaaacttgcccagcaagccaaaaatcgtgtcgcgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 35853571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 29990909 - 29990688
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||   ||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||  |||||||||| |||    
T  29990909 ctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgactcaaggtacgatcaa 29990810  T
Q  101 ccttatcctgaaaatcttgcccaacaagcca-aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgc 199  Q
     |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  29990809 tcttatcctaaaaatcttgcccagcaagccaaaaaatcgtgtcacgattggacgccctgaaaa-cagctctcgacattaccaaaattatgtcacgattgc 29990711  T
Q  200 caaatcgtgtcacgatttctctg 222  Q
    |||||||| ||||||||||||||    
T  29990710 caaatcgtatcacgatttctctg 29990688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 4178629 - 4178482
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  4178629 ctgcaaagaacacttttatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcttgccacgattgatgcgtacgatccaaggtacgaccaa 4178530  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4178529 ccttatcctgaaaatcttgcctaacaagccaaaaatcgtgtcacgatt 4178482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 19495802 - 19495585
Alignment:
Q  24 gtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgccca 123  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19495802 gtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgccca 19495703  T
Q  124 acaagccaaaa----------------------atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca 201  Q
     ||||||||||                      || ||||||||||||||| |||||||||| ||||||||||||||||||||| ||| || | ||||||    
T  19495702 gcaagccaaaaaatcgtggcacgttttcccaaaattgtgtcacgattggacaccctgaaaac-agctctcgacattaccaaaat-gtgacatgcttgcca 19495605  T
Q  202 aatcgtgtcacgatttctct 221  Q
    ||||||||||||||||||||    
T  19495604 aatcgtgtcacgatttctct 19495585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 23554894 - 23554653
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  |||||| ||||| ||||||||||||||||| |   ||| |||||||||||||||||||||| |||| ||||||||||    
T  23554894 ctgcaaagaacacttatatagcagtcttcagcgtcaaaatcgtgtcacgttttccattaatcgtgtcacgattgatgcgtacgacccaatgtacgaccaa 23554795  T
Q  101 ccttatcctgaaaatcttgcccaacaag---------------------ccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattac 179  Q
    |||||||||||||| |||||||| ||||                     || ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23554794 ccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaac-agctctcgacattac 23554696  T
Q  180 caaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    |||||| ||| |||| ||||||||| || ||||||||||||||    
T  23554695 caaaatcgtgacacgcttgccaaattgtatcacgatttctctg 23554653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 2761616 - 2761791
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| ||||||||| ||||||||||||||    
T  2761616 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgacca 2761714  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacatt 177  Q
    | ||||||||||||| |||||||| |||||  ||||||||||||||||||| | ||||| ||| ||||||||||||||    
T  2761715 atcttatcctgaaaa-cttgcccagcaagctgaaaatcgtgtcacgattgggcaccctgcaaaacagctctcgacatt 2761791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 216
Target Start/End: Complemental strand, 48491395 - 48491219
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||| ||||||||||| ||  ||| ||| |||| ||| ||||||||| |||||||||||||||||| ||| |||||  | ||||||||||||| |||||    
T  48491395 aaatcatgtcacgttttgcca-aatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaag-cgtgcccaacaagccgaaaat 48491298  T
Q  137 cgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    |||||||||||||||| ||||| ||| |||||| |||||||  | || | ||| |||| |||||||||||||||||||||    
T  48491297 cgtgtcacgattggacaccctgcaaaacagctcacgacatt-gcgaattcgtgacacggttgccaaatcgtgtcacgatt 48491219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 4178477 - 4178412
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4178477 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgatt 4178412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 222
Target Start/End: Complemental strand, 44847838 - 44847656
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaag-ccaaaaa 135  Q
    |||||||| ||||||||  || ||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |||  ||||||||    ||||    
T  44847838 aaatcgtgccacgtttt--ccaaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa-cttaaccaacaagtttgaaaa 44847742  T
Q  136 tcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    | ||| ||||||  |||  |||| |||||||||| |||||||| |||||| ||||||||||  | ||||||||||||||||||||||    
T  44847741 ttgtgccacgatctgacatcctgcaaaccagctcacgacatta-caaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 44847656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46516058 - 46515898
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||  ||| ||| || | ||| ||| ||||| |||||||  |||||    
T  46516058 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgcca-aatcgtgacatgcttggtgcatacgacccaaggtgtgacca 46515960  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaa 162  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||  | |||||||||    
T  46515959 accttatcctgaaaa-cgtgcccaacaagccaaaaatcgtgacacgattgagcaccctgaaaa 46515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 18126498 - 18126355
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||   |||||  || ||| ||||||||||||||||| | | ||| ||| |||| ||| ||||||||| ||||||||||||||    
T  18126498 ctgcaaagaacacttatatatcagtctttagctgtcaaaatcgtgtcacgtttt-ctcaaatcgtgacacgtttggtgcgtacgacccaaggtacgacca 18126400  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    || |||||||||||| ||||||||||||||| |||||||| |||||    
T  18126399 acattatcctgaaaa-cttgcccaacaagccgaaaatcgtatcacg 18126355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 47676450 - 47676593
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||   ||||||  | ||| |||| |||||||||||| ||  ||| ||| |||| ||| ||||||||| ||||||||||||||    
T  47676450 ctgcaaagaacacttatatatcagtcttcaactgtcaaaattgtgtcacgtttt-ccaaaatcgtgacacgtttggtgcgtacgacccaaggtacgacca 47676548  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  47676549 accttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcacg 47676593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 14070149 - 14070291
Alignment:
Q  3 gcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||   |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| ||| ||||| ||||||||||||||||    
T  14070149 gcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaac 14070247  T
Q  102 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| |||||| |||||| | |||| | ||||||||||||||    
T  14070248 cttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacg 14070291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 14380177 - 14380319
Alignment:
Q  3 gcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||   |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| ||| ||||| ||||||||||||||||    
T  14380177 gcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaac 14380275  T
Q  102 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| |||||| |||||| | |||| | ||||||||||||||    
T  14380276 cttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacg 14380319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 21983595 - 21983702
Alignment:
Q  6 aagaacacttatatagttgtcttctgcg-tcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    |||||||||||||||| ||||||| ||| || |||||||||||||||||  || ||| ||| ||| |||| ||||||||| |||||||||||||||||||    
T  21983595 aagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgtttt--ccaaatcgtgacacaattggtgcgtacgacccaaggtacgaccaacctt 21983692  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  21983693 atcctgaaaa 21983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 1113444 - 1113360
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggac 152  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||    
T  1113444 cacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaat-ttgcccatcaggccgaaaatcgtgtcacgattggac 1113360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 47674257 - 47674400
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||| |||||||  |||||| || ||| ||||| ||||| ||||| ||  ||| ||| |||| ||| ||||||| | ||||||||||||||    
T  47674257 ctgcaaagaacacctatatagcagtcttcagctgtcaaaatcatgtcatgtttt-ccaaaatcgtgacacgtttggtgcgtacaacccaaggtacgacca 47674355  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  47674356 accttatcctgaaaa-cttgcccagcaagccgaaaatcgtgtcacg 47674400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 49092041 - 49092150
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||||   | ||| ||||||| |||| ||| |||||||||||||||||||||||||    
T  49092041 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaaggtacgaccaacctt 49092140  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  49092141 atcctgaaaa 49092150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 145
Target Start/End: Complemental strand, 43864057 - 43863972
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||| || ||||| || ||||||||||||||    
T  43864057 aattgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-ctttcctaacaaaccgaaaatcgtgtcacg 43863972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4586015 - 4585872
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||   |||||  || ||| |||||||||||| |||| ||| ||| ||| || | ||| ||||||||| ||||||||||||||    
T  4586015 ctgcaaagaacacttatataacagtctttagctgtcaaaatcgtgtcacatttt-cccaaatcgtgacatgtttggtgcgtacgacccaaggtacgacca 4585917  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||  |||||| ||| |||||||||||||||||| |||||||    
T  4585916 accttatattgaaaa-cttacccaacaagccaaaaatcttgtcacg 4585872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 6360495 - 6360587
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||| ||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  6360495 tttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaa-cttgcccaacaagccgaaaatcgtgtcacg 6360587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 27347740 - 27347636
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    |||||||||||| |||| ||| ||  ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  27347740 aaatcgtgtcacatttt-cccaaaccgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaat 27347643  T
Q  137 cgtgtca 143  Q
    | |||||    
T  27347642 catgtca 27347636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 2647410 - 2647334
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||| |||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  2647410 aaatcgtatcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 2647334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 26417101 - 26417025
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    |||| ||| ||||||||| |||||||||||||||||||| |||||||| |||| ||||||| | ||||||||||||||    
T  26417101 cacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaaa-cttgtccaacaaactaaaaatcgtgtcac 26417025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 2479751 - 2479795
Alignment:
Q  70 gattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  2479751 gattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 4538931 - 4539008
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||  | ||| || ||||||||||||||    
T  4538931 cacgtttggtgcgtacgatccaaggtacgaccaaccttgtcctgaaaa-cttgcttagcaaaccgaaaatcgtgtcacg 4539008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 21989260 - 21989367
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||| ||||  || |||  || |||||||| |||||| || ||||||||||| |||||||    
T  21989260 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacatttt--ccaaatcatgacacgattgctgcgtatgacccaaggtacgatcaacctt 21989357  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  21989358 atcctgaaaa 21989367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 21989405 - 21989494
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||| ||||||||| ||||||| |||||||||| ||||||| | ||||| ||||||||||    ||||| ||||||||||||||||    
T  21989405 aaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgc-aaaatcgtgtcacgatgatgaaatcttgtcacgatttctctg 21989494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 33332134 - 33332057
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||||  |||||| ||||   ||||||||||||||    
T  33332134 cacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaat-gtgcccagcaagttgaaaatcgtgtcacg 33332057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 47264027 - 47264102
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| |||||| ||||||| ||||||| ||||| |||||||||||||||||||||||    
T  47264027 aaatcgtgccacgtttt--ccaaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaa 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 2389850 - 2389786
Alignment:
Q  79 gtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcac 144  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |||||  |||||||||||||    
T  2389850 gtacgatccaaggtacgaccaaccttatcctgaaaa-cgttcccagcaagctgaaaatcgtgtcac 2389786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 3050494 - 3050569
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaa 113  Q
    ||||||||||||| ||||||  |||  ||||||||||||||||||||| |||||||||||||||  |||||| ||||    
T  3050494 aaatcgtgtcacgattttcca-aatgatgtcacgattgatgcgtacgacccaaggtacgaccaatattatccagaaa 3050569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 43863964 - 43863880
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||||||| | | ||||||  ||||| | || ||||||||| ||| |||| || ||||||||||||||||||    
T  43863964 aaaatcgtgtcacgattggacactcggaaaacatgctctgggcactaccaaaatggtgacacgctttccaaatcgtgtcacgatt 43863880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 48489247 - 48489141
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||| ||||||||||| ||  ||| ||| |||||||| ||||||| | |||||||| ||||||||||||||||  || | |||||| |||||||||||     
T  48489247 aaatcatgtcacgttttgcca-aatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctg-gaagcatgcccagcaagccaaaaac 48489150  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  48489149 cgtgtcacg 48489141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 4796268 - 4796181
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttct 219  Q
    ||||||||||||||||||  | ||||| ||| || ||||||||||||||||||| ||| |||| |    |||||||||||||||||||    
T  4796268 aaaatcgtgtcacgattgagcaccctgcaaaacaactctcgacattaccaaaatcgtgacacgttgatgaaatcgtgtcacgatttct 4796181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 47264151 - 47264229
Alignment:
Q  142 cacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctct 221  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||| ||||||||||  | |||||||||||||||||||||    
T  47264151 cacgatttgacaccctacaaaccagctcacgacattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttctct 47264229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 2479834 - 2479923
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||| ||||||| ||| ||||| |||||||||| || |||||  ||||| ||||||||||  | |||||||||||| |||||||||    
T  2479834 aaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattag-aaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctg 2479923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 6570381 - 6570300
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 149  Q
    |||| |||||||||| || ||||||||||| |||||||||||| |||| | || | | || ||||||||||||||||||||||    
T  6570381 cacggttgatgcgtatgacccaaggtacgatcaaccttatcct-aaaaacgtgtcaagcatgccaaaaatcgtgtcacgattg 6570300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 31733354 - 31733407
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||| ||||||||    
T  31733354 gtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaattgtgtcacg 31733407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 32358434 - 32358511
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||||||| | |||||| |||||  ||||| ||||||||    
T  32358434 cacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaa-cgtgcccagcaagctgaaaattgtgtcacg 32358511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 4796344 - 4796276
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||||||||||||||  ||||||||||| | |||||| ||||   ||||||||||||||    
T  4796344 tgcgtacgatccaaggtacgaccaactctatcctgaaaa-cgtgcccatcaagttgaaaatcgtgtcacg 4796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30025046 - 30025099
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttt 53  Q
    |||||||||||||||||||||| |||||| || ||| |||||||||||||||||    
T  30025046 ctgcaaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttt 30025099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 29608240 - 29608192
Alignment:
Q  129 ccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacatt 177  Q
    |||||||||||||||||||||||| ||||| |||  |||||||||||||    
T  29608240 ccaaaaatcgtgtcacgattggacaccctgcaaaatagctctcgacatt 29608192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 39731056 - 39730970
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  39731056 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 39730970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 48408521 - 48408435
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||||| |||||||||| ||||||| ||||||||||||||||||    
T  48408521 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctg 48408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 21983753 - 21983830
Alignment:
Q  144 cgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||| | ||||| |||||||||| ||||||| | ||||| ||||||||||    ||||||||||||||||||||||    
T  21983753 cgattggtcaccctgcaaaccagctcacgacattgc-aaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctg 21983830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 48599963 - 48600044
Alignment:
Q  134 aatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||  | ||||| ||| ||||||||||||||  |||||| ||| |||| ||  |||||||||||||||||    
T  48599963 aatcgtgtcacgattgtgcaccctgcaaaacagctctcgacatt-gcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 48600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 29608299 - 29608263
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaag 128  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29608299 gtacgaccaaccttatcctgaaaa-cttgcccaacaag 29608263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 6360595 - 6360674
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcac 212  Q
    ||||||||||||| ||||| | ||||| ||| ||||||||||||||  |||||||| | |||| ||  |||||||||||||    
T  6360595 aaaatcgtgtcacaattgggcaccctgcaaaacagctctcgacatt-gcaaaattgcgacacgcttcacaaatcgtgtcac 6360674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 18414152 - 18414238
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    |||||||||||||| | ||||||| |||||||||| || ||  | |||||| ||| ||||| ||||||| |||||||||||||||||||    
T  18414152 atcgtgtcacgatttggcgccctgcaaaccagctcacggcacca-caaaatcgtgccacga-tgccaaattcgtgtcacgatttctctg 18414238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 30026391 - 30026456
Alignment:
Q  78 cgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||  |||||||||||||||||||||||||||  | |||||  |||||  ||||||||||||||    
T  30026391 cgtacgactcaaggtacgaccaaccttatcctgaaa--cgtgcccggcaagctgaaaatcgtgtcacg 30026456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 52082972 - 52083191
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||| |||||||    
T  52082972 tgcaaagaacacttatataggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaac 52083071  T
Q  102 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| || |||| ||||||    
T  52083072 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacaccct-aaaaacagctctcgacattgccaaaattatgacacgcttgcca 52083170  T
Q  202 aatcgtgtcacgatttctctg 222  Q
    |||||||||||||||||||||    
T  52083171 aatcgtgtcacgatttctctg 52083191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 52093979 - 52094198
Alignment:
Q  2 tgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaac 101  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||| |||||||    
T  52093979 tgcaaagaacacttatataggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgaccaac 52094078  T
Q  102 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| || |||| ||||||    
T  52094079 cttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacaccct-aaaaacagctctcgacattgccaaaattatgacacgcttgcca 52094177  T
Q  202 aatcgtgtcacgatttctctg 222  Q
    |||||||||||||||||||||    
T  52094178 aatcgtgtcacgatttctctg 52094198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 48142895 - 48142687
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  | |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||            ||||    
T  48142895 ctgcaaagaacacttatatagcagacttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcgtacga------------ccaa 48142808  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcc 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| || ||    
T  48142807 ccttatcctgaaaatcttgcccaacaagccaaaaattgtgtcacgattggacgccctgaaaa-cagctctcgacattaccaaaatcgtgacacgctttcc 48142709  T
Q  201 aaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||||    
T  48142708 aaatcgtgtcacgatttctctg 48142687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 52095679 - 52095818
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacct 103  Q
    ||||||||||||||||||  |||||| |||||||||||||  |||||||||||   || |||||||||||||||| ||||| ||||||||||||||||||    
T  52095679 caaagaacacttatatagcagtcttcagcgtcgaaatcgt--cacgtttttcctatatcgtgtcacgattgatgcttacgacccaaggtacgaccaacct 52095776  T
Q  104 tatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  52095777 tatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 52095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 54200223 - 54200439
Alignment:
Q  4 caaagaacacttatatagttgtcttctgcg-tcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacc 102  Q
    ||||||||||||||||||  |||||| ||  || |||||||||||| |||| ||| ||| ||| |  | ||| ||||||||| |||||||||||||||||    
T  54200223 caaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacatttt-cccaaatcgtgactagtttggtgcgtacgacccaaggtacgaccaacc 54200321  T
Q  103 ttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaa 202  Q
    ||||| |||||| |||||||| |||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||| ||||  |   ||    
T  54200322 ttatcttgaaaa-cttgcccagcaagccgaaaatcgtgtcacgattggacaccctgcaaaacagctctcgacattaccaaaatcgtgacacgcctatgaa 54200420  T
Q  203 atcgtgtcacgatttctct 221  Q
    |||||||||||||||||||    
T  54200421 atcgtgtcacgatttctct 54200439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 30000873 - 30000982
Alignment:
Q  87 caaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatt 186  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||     
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattggatgccctgaaaa-cagctctcgacataaccaaaatc 30000971  T
Q  187 gtgtcacgatt 197  Q
    |||||||||||    
T  30000972 gtgtcacgatt 30000982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5370400 - 5370536
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacg-tttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||||||            |||||||||    
T  5370400 ctgcaaagaacacttatatagttgtcttcagcgtcgaaatcgtgtcacgttttttccccaatcgtgccacgattgatgc------------gtacgacca 5370487  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatt 148  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  5370488 accttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatt 5370536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29254348 - 29254192
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||||||  ||| ||| |||| ||| ||||||||||||||  ||||||||    
T  29254348 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttcca-aatcgtgacacgtttggtgcgtacgatccaaaatacgacca 29254250  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattggacgccctg 158  Q
    ||||||| ||||| | ||||||||||||||| |||||| |||||||||||||| |||||    
T  29254249 accttattctgaata-cttgcccaacaagccgaaaatcatgtcacgattggacaccctg 29254192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 34570728 - 34570871
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    ||||||||||||| |||||||| |||||| || ||| ||||||||||||||||| ||| ||| ||| |||| ||| ||||||||| ||||||||| ||||    
T  34570728 ctgcaaagaacacatatatagtagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacaacca 34570826  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  34570827 accttatcctgaaaa-cttgtccagcaagccgaaaatcgtgtcacg 34570871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 56178950 - 56179082
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||||||||   |||||| |||||||||||||||||| ||||||||  || ||||||||||||||||            ||||||||||    
T  56178950 ctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacatttttcccagatcgtgtcacgattgatgc------------gtacgaccaa 56179037  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  56179038 ccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacg 56179082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 54867531 - 54867669
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||| |||||| || ||| |||||||||||||||| |||  ||| ||| |||||||| |||||||||||||||||||||||||||||    
T  54867531 aagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgatccaaggtacgaccaacctt 54867629  T
Q  105 atcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||||| | |||||| ||||   ||||||||||||||    
T  54867630 atcc-gaaaaacgtgcccagcaagttgaaaatcgtgtcacg 54867669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30000119 - 30000212
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtac 94  Q
    ||||||| |||||||||||||   ||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |||||||||    
T  30000119 ctgcaaaaaacacttatatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtac 30000212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37740480 - 37740337
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacca 99  Q
    |||||||||||||||||||||  |||||| || ||| ||||||||||||||||| ||| ||| ||| |||  ||| || |||||| ||||||||||||||    
T  37740480 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-cccaaatcgtgacacatttggtgtgtacgacccaaggtacgacca 37740382  T
Q  100 accttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||||| |||||||  |||||| |||||| |||||||    
T  37740381 accttatcctgaaaa-cttgccctgcaagccgaaaatcatgtcacg 37740337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5429533 - 5429391
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    |||||||||||||||||||||  || ||| ||||| ||||||||||| ||||| || || | ||| |||||||| ||||||||| |||||||||||||||    
T  5429533 ctgcaaagaacacttatatagcagttttcagcgtcaaaatcgtgtcatgttttcccaca-tcgtgacacgattggtgcgtacgacccaaggtacgaccaa 5429435  T
Q  101 ccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
     |||| |||||||| |||| |||||||||  |||||||| |||||    
T  5429434 tcttaacctgaaaa-cttgtccaacaagctgaaaatcgtatcacg 5429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 36314975 - 36314837
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  36314975 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 36314877  T
Q  105 atcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||| | |||||| ||||   ||||||||||||||    
T  36314876 atcctgaaaa-cgtgcccagcaagttgaaaatcgtgtcacg 36314837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 36329184 - 36329046
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  36329184 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 36329086  T
Q  105 atcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||| | |||||| ||||   ||||||||||||||    
T  36329085 atcctgaaaa-cgtgcccagcaagttgaaaatcgtgtcacg 36329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 8689241 - 8689134
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||| |||||||||||||||||  || ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  8689241 aagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaacctt 8689144  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  8689143 atcctgaaaa 8689134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 25861784 - 25861640
Alignment:
Q  1 ctgcaaagaa-cacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgacc 98  Q
    |||||||||| |||||||||||  ||||||  | ||| |||||||||||||||| |||  ||| ||| |||||||||||||||||| |||||||||||||    
T  25861784 ctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtcca-aatcgtgacacgattgatgcgtacgacccaaggtacgacc 25861686  T
Q  99 aaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||| | |||||| ||||   ||||||||||||||    
T  25861685 aaccttatcctgaaaa-catgcccagcaagttgaaaatcgtgtcacg 25861640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 5370541 - 5370606
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||    
T  5370541 aaaatcgtgtcacgattggacgccctgaaaaacatctctcgacattaccaaaatcgtgtcacgatt 5370606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 26363864 - 26363758
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||||||| |||| ||| ||||||||| |||||||| |||||||||||||||||||| ||||| || |||||| |||||    
T  26363864 aaatcgtgtcacgattt-cccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaa-cttgctcagcaagccgaaaat 26363767  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  26363766 cgtgtcacg 26363758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 12745796 - 12745874
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||  |||||||| ||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||    
T  12745796 cacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacg 12745874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 52095826 - 52095915
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||||||| |||||||||| | |||| |||||| |||||||  || |||| |||||||||||||||||||||||||||    
T  52095826 aaaatcgtgtcacgattggacaccctgaaaacaa-ctcttgacattgccaaaatcatgacacgcttgccaaatcgtgtcacgatttctctg 52095915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 5268945 - 5268837
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||  |||||||||||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  5268945 aagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 5268847  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  5268846 atcctgaaaa 5268837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 56179090 - 56179154
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  56179090 aaaatcgtgtcacgattggacgccctgaaaa-cagctttcgacattaccaaaatcgtgtcacgatt 56179154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 6655555 - 6655450
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| |||| |||||||||||||||||||||||| |||||||| ||| || |||||    
T  6655555 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cttgcccagcaaaccgaaaat 6655458  T
Q  137 cgtgtcac 144  Q
    ||||||||    
T  6655457 cgtgtcac 6655450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 9927817 - 9927917
Alignment:
Q  42 gtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 141  Q
    |||||||||||| ||| ||| ||| |||| ||| ||||||||| |||||| |||||||||||||||||||||| |||| ||| |||||| ||||||||||    
T  9927817 gtgtcacgtttt-cccaaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaa-cttgtccagcaagccgaaaatcgtgt 9927914  T
Q  142 cac 144  Q
    |||    
T  9927915 cac 9927917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 16623006 - 16622931
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||||  || ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  16623006 aaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 16622931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 46570124 - 46570201
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||    
T  46570124 cacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaat-ttgcccagcaagccgaaaattgtgtcacg 46570201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 145
Target Start/End: Complemental strand, 54882618 - 54882533
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||  ||| ||||||||| ||||||||||| ||||||||||||||||| | || |||||||||| ||||||||||||||    
T  54882618 aattgtgtcacagttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaa-cgtgtccaacaagccgaaaatcgtgtcacg 54882533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 41639130 - 41639058
Alignment:
Q  72 ttgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||   ||||||||||||||    
T  41639130 ttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cgtgcccaacaagttgaaaatcgtgtcacg 41639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 6743160 - 6743022
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  ||||||  | ||| |||| |||||| ||||| ||| ||| ||| |||||||  ||||||||  |||||||||||||||||||    
T  6743160 aagaacacttatatagcagtcttcaactgtcaaaattgtgtcaagtttt-cccaaatcgtgacacgattagtgcgtacgtcccaaggtacgaccaacctt 6743062  T
Q  105 atcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||| | |||||||||||   ||||||||||||||    
T  6743061 atcctgaaaa-cgtgcccaacaagtttaaaatcgtgtcacg 6743022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 27417520 - 27417595
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaa 113  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  27417520 aaatcgtgtcacgattt-cccaaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaa 27417595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 16628585 - 16628510
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||||  || ||| ||| |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  16628585 aaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcatgaaaa 16628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 38152121 - 38152075
Alignment:
Q  68 acgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  38152121 acgattgatgcgtacgatccaaggtacgaccaaccttatccggaaaa 38152075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 39774030 - 39773981
Alignment:
Q  59 aattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcc 108  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  39774030 aattgtgtcacgattgatgcgtatgacccaaggtacgaccaaccttatcc 39773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 5148064 - 5148137
Alignment:
Q  39 atcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    ||||||||||||||| |   ||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  5148064 atcgtgtcacgttttgca--aatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 5148137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 5048880 - 5048826
Alignment:
Q  167 ctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctct 221  Q
    ||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||    
T  5048880 ctctcgacattaccaaaatcgtgacacgcttgccaaatcgtatcacgatttctct 5048826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 12739942 - 12739992
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 141  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgt 12739992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 12748148 - 12748198
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 141  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgt 12748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 24968901 - 24968851
Alignment:
Q  64 tgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  24968901 tgtcacgattgaagcgtacgacccaatgtacgaccaaccttatcctgaaaa 24968851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 26176028 - 26176081
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  26176028 gtacgaccaaccttatcctgaaaa-cttgcccatcaagccgaaaatcgtgtcacg 26176081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 50674429 - 50674521
Alignment:
Q  52 tttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||| ||| ||| |||| ||| ||||||||| ||||||||| ||||||||||||||||||| | |||||| |||||  |||||| |||||||    
T  50674429 tttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cgtgcccagcaagctgaaaatcatgtcacg 50674521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 3777961 - 3778008
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  3777961 cacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaa 3778008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 5396375 - 5396328
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  5396375 cacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaa 5396328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 13992753 - 13992842
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    ||||||||||||||||| | | ||||| |||||||||| |||||| | | |||| ||||||||| ||||||| |||||||||||||||||||    
T  13992753 aaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatca-cgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctg 13992842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 5143645 - 5143720
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||||||||||  || ||| ||| |||||||| |||| || | ||||||| |||||||||||||||||||||    
T  5143645 aaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaa 5143720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 35661985 - 35661937
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtg 140  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  35661985 gtacgaccaaccttatcctgaaaa-cgtgcccaacaagccgaaaatcgtg 35661937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 50263305 - 50263368
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgt 141  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||| |||| |||||| ||||||||||    
T  50263305 tgcgtacga-ccaaggtacgaccaaccttattctgaaaa-cttacccaccaagccgaaaatcgtgt 50263368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 40630583 - 40630477
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||| ||| || || ||||||||||||||||||||| ||||||||  |||| | |||||  |||||    
T  40630583 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaat-gtgcctagcaagctgaaaat 40630486  T
Q  137 cgtgtcacg 145  Q
    |||||||||    
T  40630485 cgtgtcacg 40630477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 2209266 - 2209213
Alignment:
Q  91 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||||||||||||||||||||||| |||||| | ||| || ||||||||||||||    
T  2209266 gtacgaccaaccttatcctgaaaa-cttgcctagcaaaccgaaaatcgtgtcacg 2209213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 31985323 - 31985164
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgacca-accttatcctgaaaatcttgcccaacaag-ccaaaaatcgtgtcacgattggacgccctgaa 160  Q
    |||||||||||||||||||||   |||||||||||||  |||||||||||||| |||  ||| ||||    ||||||||||||||||| | | |||||      
T  31985323 gtgtcacgattgatgcgtacgtcacaaggtacgaccagtccttatcctgaaaa-cttaaccagcaagtttgaaaatcgtgtcacgatttggcaccctgct 31985225  T
Q  161 aaccagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    ||| ||||| ||  || | |||||| ||||||||| ||||||| |||||||||||||||||||    
T  31985224 aactagctcacggtatca-caaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctg 31985164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 3909884 - 3909810
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtca 143  Q
    |||| |||||||||||||  ||||||||||||||||||||| |  ||| | |||| |||| ||||||||| ||||||    
T  3909884 cacggttgatgcgtacgactcaaggtacgaccaaccttatctt--aaaacgtgccaaacatgccaaaaatagtgtca 3909810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 5148176 - 5148264
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctct 221  Q
    ||||||||| ||||||||| | ||||| |||| ||||| ||||||| | ||||| |||||||| |    |||||||||||||||||||||    
T  5148176 aaaatcgtgccacgattggtcaccctgcaaactagctcacgacattgc-aaaatcgtgtcacggtgataaaatcgtgtcacgatttctct 5148264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26175950 - 26176003
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttt 53  Q
    |||||||||||||||||||||  |||||| || ||| |||||||||||||||||    
T  26175950 ctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 26176003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 2209205 - 2209122
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatt 216  Q
    ||||||||||||||||||| | | ||| ||| ||||||||||||||  |||||| ||| |||| ||   ||||||||||||||||    
T  2209205 aaaatcgtgtcacgattgggcactctgcaaaacagctctcgacatt-gcaaaatcgtgacacgcttcaaaaatcgtgtcacgatt 2209122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 28468100 - 28468014
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||||| |||| ||||| ||||||| ||||||||||||||||||    
T  28468100 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcac-aaaatcgtgttacgat-gccaaattcgtgtcacgatttctctg 28468014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 434387 - 434239
Alignment:
Q  1 ctgcaaagaacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaa 100  Q
    ||||||||||||||| |||||  |||||||||||| |||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  434387 ctgcaaagaacacttttatagcggtcttctgcgtcaaaatcgtgccacgtttttccccaatcgtgccacgatttatgcgtacgatccaaggtacgaccaa 434288  T
Q  101 ccttatcctgaaaatcttgcccaacaagcca-aaaatcgtgtcacgatt 148  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  434287 ccttatcctgaaaatcttgcccagcaagccaaaaaatcgtgtcacgatt 434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 114432 - 114297
Alignment:
Q  9 aacacttatatagttgtcttctgcgtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcc 108  Q
    |||||||||||||  | |||| || |||||||||||||||||||| |  |||| ||||||||| |||||||||||| ||||||||| |||||||||||||    
T  114432 aacacttatatagcagccttcagcatcgaaatcgtgtcacgttttccatcaatcgtgtcacgagtgatgcgtacgacccaaggtaccaccaaccttatcc 114333  T
Q  109 tgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||| ||||||| |||||| ||||||||||||||    
T  114332 tgaaaattttgcccagcaagcc-aaaatcgtgtcacg 114297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 8106 - 7948
Alignment:
Q  63 gtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaag-ccaaaaatcgtgtcacgattggacgccctgaaa 161  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||  ||||||||    ||||||||||||||||| | | ||||| ||    
T  8106 gtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa-cttaaccaacaagtttgaaaatcgtgtcacgatttggcaccctgcaa 8008  T
Q  162 accagctctcgacattaccaaaattgtgtcacgattgccaaa-tcgtgtcacgatttctctg 222  Q
    |||| ||| || ||| | |||||| ||||||||| ||||||| |||||||||||||||||||    
T  8007 accaactcacggcatca-caaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctg 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 6037 - 6145
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||| ||||||||  |||||| || ||| |||||||||||||||| |||  ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  6037 aagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtcca-aattgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 6135  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  6136 atcctgaaaa 6145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 2845 - 2953
Alignment:
Q  6 aagaacacttatatagttgtcttctgc-gtcgaaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaacctt 104  Q
    ||||||||||||||||  |||||| || ||  |||||||||||||||| |||  ||| ||| |||||||| ||||||||| |||||||||||||||||||    
T  2845 aagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtcca-aatcgtgacacgattggtgcgtacgacccaaggtacgaccaacctt 2943  T
Q  105 atcctgaaaa 114  Q
    ||||||||||    
T  2944 atcctgaaaa 2953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 132992 - 132917
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  132992 aaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaa 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 132878 - 132789
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||||||||||| ||| | ||| |||||||||| |||||| | |||||| ||| ||||||  |  |||||||||||||||||||||    
T  132878 aaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatca-caaaatcgtgccacgataccacaatcgtgtcacgatttctctg 132789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 80852 - 80958
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  80852 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa-cttgcccagcaagccgaaaat 80949  T
Q  137 cgtgtcacg 145  Q
    |||| ||||    
T  80950 cgtgccacg 80958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 11157 - 11052
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||||||||| ||| ||| ||| ||| |||| ||| ||||||||| |||| |||||||||||||||||||||||| |||||||| ||| || |||||    
T  11157 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaa-cttgcccagcaaaccgaaaat 11060  T
Q  137 cgtgtcac 144  Q
    ||||||||    
T  11059 cgtgtcac 11052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 45583 - 45658
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  45583 aaatcgtgccacgtttt--ccaaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaa 45658  T

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Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 45699 - 45761
Alignment:
Q  134 aatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgatt 197  Q
    ||||||| ||||||| ||| ||||| ||| |||||| ||||||||| |||||||||||||||||    
T  45699 aatcgtgccacgatttgacaccctgcaaatcagctcacgacattac-aaaattgtgtcacgatt 45761  T

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Target: scaffold0066 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 20804 - 20872
Alignment:
Q  76 tgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    ||||||||| ||||||||||||||||||||| || |||| ||| ||||||||||| ||||||||||||||    
T  20804 tgcgtacgacccaaggtacgaccaaccttattct-aaaaactttcccaacaagccgaaaatcgtgtcacg 20872  T

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Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 6927 - 6800
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaat 136  Q
    ||||||| ||||||||| | | ||| ||| || | ||| ||||||||| ||||||||| ||||||||||||||||||| | | || | ||||   |||||    
T  6927 aaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaa-cgttcctagcaagttgaaaat 6829  T
Q  137 cgtgtcacgattggacgccctgaaaacca 165  Q
    |||||||||||||||| ||||| ||||||    
T  6828 cgtgtcacgattggacaccctgcaaacca 6800  T

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Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 17644 - 17721
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 145  Q
    |||| ||| |||||||||  || |||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  17644 cacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaag-cttgcccagcaagccaaaaatcgtgtcacg 17721  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 36545 - 36470
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| ||| || ||||| ||||||||| |||||||||||||||||||||||||||||    
T  36545 aaatcgtgccacgtttt--ccaaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaa 36470  T

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Target: scaffold0087; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 43560 - 43472
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgcca-aatcgtgtcacgatttctct 221  Q
    ||||||||  ||||||| ||| ||||| |||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||||||    
T  43560 aaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattac-aaaatcgtgtcacgat-gccacaatcgtgtcacgatttctct 43472  T

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Target: scaffold0087; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 43674 - 43599
Alignment:
Q  37 aaatcgtgtcacgtttttccccaattgtgtcacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||| ||||||||  || ||| ||| |||||||||| | ||||| |||||||||||||||||||||||||||||    
T  43674 aaatcgtgccacgtttt--ccaaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaa 43599  T

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Target: scaffold0510 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 1295 - 1248
Alignment:
Q  67 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaa 114  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  1295 cacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaa 1248  T

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Target: scaffold0510; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 1209 - 1120
Alignment:
Q  132 aaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaatcgtgtcacgatttctctg 222  Q
    ||||||||  ||||||| ||| ||||| |||||| ||| ||| ||||| ||||| ||||||||||  | ||||||||||||||||| ||||    
T  1209 aaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattac-aaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctg 1120  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 17554 - 17468
Alignment:
Q  135 atcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaattgtgtcacgattgccaaat-cgtgtcacgatttctctg 222  Q
    |||||||||||||| | | ||||| |||||||||| || ||| || ||| | |||||||||| ||||||| ||||||||||||||||||    
T  17554 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaa-tcgtgtcacgat-gccaaattcgtgtcacgatttctctg 17468  T

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