View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3614_high_23 (Length: 258)
Name: NF3614_high_23
Description: NF3614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3614_high_23 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 12358819 - 12359062
Alignment:
| Q |
1 |
cacaaacacttcaaataatttattcatcattacactatgatttatttcaaacctcgttacaagagtataagaaacacgtgtcatgtcaatgtcgtggacg |
100 |
Q |
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| T |
12358819 |
cacaaacacttcaaataatttattcatcattacactatgatttatttcaaacctcgttacaagagtataagaaacacgtgtcatgtcaatgtcgtggacg |
12358918 |
T |
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| Q |
101 |
acaattgaa----tgaatgaatgaatgaaggtttatgtcagccgtcagatctgatgaaacctgcaaagttcctacaactatgctgccgtattgagaaggt |
196 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12358919 |
acaattgaatgaatgaatgaatgaatgaaggtttatgtcagccgtcagatctgatgaaacctgcaaagttcctacaactatgctgccgtattgagaaggt |
12359018 |
T |
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| Q |
197 |
agaaaacgaccactgaggtgatgactggtttgaaggccttgttt |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12359019 |
agaaaacgaccactgaggtgatgactggtttgaaggccttgttt |
12359062 |
T |
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