View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3614_high_8 (Length: 423)

Name: NF3614_high_8
Description: NF3614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3614_high_8
NF3614_high_8
[»] chr5 (15 HSPs)
chr5 (356-405)||(14654932-14654981)
chr5 (358-405)||(1590156-1590203)
chr5 (364-402)||(19924900-19924938)
chr5 (364-402)||(19931849-19931887)
chr5 (364-405)||(17201239-17201280)
chr5 (365-403)||(16365745-16365783)
chr5 (364-402)||(19922150-19922188)
chr5 (367-404)||(8544766-8544803)
chr5 (365-405)||(12436766-12436806)
chr5 (377-405)||(11825466-11825494)
chr5 (365-405)||(17202861-17202901)
chr5 (365-401)||(19803672-19803708)
chr5 (365-405)||(32718015-32718055)
chr5 (369-401)||(36246322-36246354)
chr5 (365-405)||(39614846-39614886)
[»] chr3 (17 HSPs)
chr3 (356-405)||(7259738-7259787)
chr3 (365-405)||(5493565-5493605)
chr3 (364-405)||(27264124-27264165)
chr3 (365-405)||(633317-633357)
chr3 (365-405)||(1272438-1272478)
chr3 (369-405)||(23272070-23272106)
chr3 (365-405)||(25841967-25842007)
chr3 (365-405)||(45759986-45760026)
chr3 (364-405)||(10614611-10614652)
chr3 (365-406)||(27817429-27817469)
chr3 (360-405)||(45667463-45667508)
chr3 (365-405)||(375758-375798)
chr3 (365-405)||(19234024-19234064)
chr3 (365-405)||(19578344-19578384)
chr3 (369-405)||(20141043-20141079)
chr3 (364-400)||(29556540-29556576)
chr3 (365-405)||(45646612-45646652)
[»] chr1 (10 HSPs)
chr1 (358-405)||(21535852-21535899)
chr1 (364-405)||(36320004-36320045)
chr1 (365-405)||(1674804-1674844)
chr1 (364-405)||(788320-788361)
chr1 (364-405)||(2655725-2655766)
chr1 (364-405)||(10430557-10430598)
chr1 (365-405)||(11238280-11238320)
chr1 (369-405)||(13254794-13254830)
chr1 (365-406)||(23698777-23698818)
chr1 (369-401)||(10101709-10101741)
[»] chr8 (21 HSPs)
chr8 (356-405)||(2742968-2743017)
chr8 (364-405)||(5870768-5870809)
chr8 (364-405)||(9455247-9455288)
chr8 (364-405)||(14896642-14896683)
chr8 (365-405)||(7578238-7578278)
chr8 (365-405)||(32233642-32233682)
chr8 (365-405)||(34146197-34146237)
chr8 (364-405)||(16599408-16599449)
chr8 (364-405)||(38457284-38457325)
chr8 (365-405)||(27231787-27231827)
chr8 (365-405)||(30887896-30887936)
chr8 (358-405)||(16393711-16393758)
chr8 (371-405)||(45083057-45083091)
chr8 (356-405)||(34038896-34038945)
chr8 (364-405)||(38401579-38401620)
chr8 (365-405)||(1530625-1530665)
chr8 (365-405)||(25496663-25496703)
chr8 (369-405)||(39628320-39628356)
chr8 (369-405)||(39637870-39637906)
chr8 (369-405)||(43026720-43026756)
chr8 (377-405)||(44666215-44666243)
[»] scaffold0006 (1 HSPs)
scaffold0006 (356-405)||(46610-46659)
[»] chr6 (12 HSPs)
chr6 (364-405)||(9095805-9095846)
chr6 (365-405)||(2437871-2437911)
chr6 (365-405)||(8049193-8049233)
chr6 (365-405)||(14093822-14093862)
chr6 (365-405)||(25056504-25056544)
chr6 (365-405)||(7972668-7972708)
chr6 (371-405)||(9353140-9353174)
chr6 (365-403)||(34889075-34889113)
chr6 (364-405)||(4122794-4122835)
chr6 (364-405)||(6111159-6111200)
chr6 (358-406)||(7833521-7833569)
chr6 (365-405)||(21527360-21527400)
[»] chr4 (20 HSPs)
chr4 (364-405)||(6949104-6949145)
chr4 (356-405)||(25493830-25493879)
chr4 (360-405)||(49263005-49263050)
chr4 (364-405)||(50720912-50720953)
chr4 (365-405)||(9089649-9089689)
chr4 (365-403)||(24538341-24538379)
chr4 (364-405)||(45635487-45635528)
chr4 (365-405)||(24074146-24074186)
chr4 (365-401)||(37210023-37210059)
chr4 (365-399)||(37371445-37371479)
chr4 (369-403)||(38434272-38434306)
chr4 (364-405)||(25490475-25490516)
chr4 (364-400)||(21342249-21342285)
chr4 (377-405)||(21956513-21956541)
chr4 (365-405)||(34032032-34032072)
chr4 (55-91)||(44273826-44273862)
chr4 (365-405)||(45666313-45666353)
chr4 (364-404)||(46016623-46016663)
chr4 (365-405)||(46195760-46195800)
chr4 (364-404)||(46250054-46250094)
[»] chr2 (18 HSPs)
chr2 (364-405)||(33659715-33659756)
chr2 (365-405)||(4316711-4316751)
chr2 (365-405)||(20171475-20171515)
chr2 (365-405)||(42756804-42756844)
chr2 (365-405)||(44898124-44898164)
chr2 (365-405)||(45273451-45273491)
chr2 (227-279)||(23081641-23081693)
chr2 (369-405)||(32113390-32113426)
chr2 (365-405)||(41541058-41541098)
chr2 (371-406)||(158126-158161)
chr2 (363-405)||(29408827-29408869)
chr2 (364-405)||(4700997-4701038)
chr2 (370-403)||(12411667-12411700)
chr2 (370-403)||(12423727-12423760)
chr2 (365-405)||(15507464-15507503)
chr2 (365-405)||(21252594-21252634)
chr2 (365-405)||(36244072-36244112)
chr2 (370-406)||(37814534-37814570)
[»] chr7 (15 HSPs)
chr7 (365-405)||(25290632-25290672)
chr7 (365-405)||(35793145-35793185)
chr7 (358-405)||(10026251-10026298)
chr7 (356-403)||(39432595-39432642)
chr7 (367-405)||(2798619-2798657)
chr7 (365-403)||(4962973-4963011)
chr7 (365-403)||(39430638-39430676)
chr7 (365-405)||(2273547-2273587)
chr7 (365-405)||(10535043-10535083)
chr7 (365-405)||(28226560-28226600)
chr7 (365-405)||(37124186-37124226)
chr7 (364-405)||(44550042-44550083)
chr7 (365-405)||(4567328-4567368)
chr7 (369-405)||(15643351-15643387)
chr7 (365-405)||(39617556-39617596)
[»] scaffold0005 (1 HSPs)
scaffold0005 (364-405)||(256757-256798)
[»] scaffold1130 (1 HSPs)
scaffold1130 (365-405)||(399-439)


Alignment Details
Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 14654932 - 14654981
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14654932 agggtatgatttgtcaattattcttatatttttcaataaaactaattaat 14654981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 1590156 - 1590203
Alignment:
Q  358 ggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  1590156 ggtatgatttgtcaattactcttatcttttttaataaaactaattaat 1590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 19924900 - 19924938
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaatt 402  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19924900 atttgtcaattattcttatctttttcaataaaactaatt 19924938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 19931849 - 19931887
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaatt 402  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19931849 atttgtcaattattcttatctttttcaataaaactaatt 19931887  T

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Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 17201239 - 17201280
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  17201239 atttgtcaattactcttatctttttcaataaaactaattaat 17201280  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 16365745 - 16365783
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaatta 403  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16365745 tttgtcaattattcttatatttttcaataaaactaatta 16365783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 19922150 - 19922188
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaatt 402  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19922150 atttgtcagttattcttatctttttcaataaaactaatt 19922188  T

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Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 8544803 - 8544766
Alignment:
Q  367 tgtcaattattcttatctttttcaataaaactaattaa 404  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  8544803 tgtcaattactcttatctttttcaataaaactaattaa 8544766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 12436806 - 12436766
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  12436806 tttgtcaattactcttatatttttcaataaaactaattaat 12436766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Complemental strand, 11825494 - 11825466
Alignment:
Q  377 tcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||||||||||||||    
T  11825494 tcttatctttttcaataaaactaattaat 11825466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 17202901 - 17202861
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  17202901 tttgtcaattacttttatctttatcaataaaactaattaat 17202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 19803672 - 19803708
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaat 401  Q
    ||||||||||| | |||||||||||||||||||||||    
T  19803672 tttgtcaattacttttatctttttcaataaaactaat 19803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 32718055 - 32718015
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  32718055 tttgtcagttattcttatatttttcaattaaactaattaat 32718015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 36246354 - 36246322
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaat 401  Q
    ||||||| |||||||||||||||||||||||||    
T  36246354 tcaattactcttatctttttcaataaaactaat 36246322  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 39614846 - 39614886
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||| ||||| ||||||||||||||| |||||||||||||    
T  39614846 tttgttaattactcttatctttttcaacaaaactaattaat 39614886  T

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Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 7259787 - 7259738
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7259787 agggtatgatttgtcaattattcttatatttttcaataaaactaattaat 7259738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 5493565 - 5493605
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5493565 tttgtcaattactcttatctttttcaataaaactaattaat 5493605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 27264124 - 27264165
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  27264124 atttgtcaattactcttatctttttcaataaaattaattaat 27264165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 633357 - 633317
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  633357 tttgtcaattactcttatcattttcaataaaactaattaat 633317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 1272438 - 1272478
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  1272438 tttgtcaattactcttatatttttcaataaaactaattaat 1272478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 23272070 - 23272106
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||||||||||||| |||||||    
T  23272070 tcaattattcttatctttttcaataaaacaaattaat 23272106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 25842007 - 25841967
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  25842007 tttgtcaattaatcttatatttttcaataaaactaattaat 25841967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 45760026 - 45759986
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  45760026 tttgtcaattactcttatctttctcaataaaactaattaat 45759986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 10614611 - 10614652
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||| |||||||||||||| ||||||||||||||    
T  10614611 atttctcaattactcttatctttttcattaaaactaattaat 10614652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 406
Target Start/End: Original strand, 27817429 - 27817469
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaatt 406  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  27817429 tttgtcaattatt-ttatctttttcaataaaactaatgaatt 27817469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 45667463 - 45667508
Alignment:
Q  360 tatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||| | | |||||||||||||||| ||||||||    
T  45667463 tatgatttgtcaattactttgatctttttcaataaaattaattaat 45667508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 375758 - 375798
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||| ||||||| ||||||||    
T  375758 tttgtcaattactcttatcttttttaataaaattaattaat 375798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 19234064 - 19234024
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| ||||||||||||||||||||  |||||||    
T  19234064 tttgtcaattactcttatctttttcaataaaaaaaattaat 19234024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 19578344 - 19578384
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  19578344 tttgtcaattgctcttgtctttttcaataaaactaattaat 19578384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 20141079 - 20141043
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  20141079 tcaattactcttatctttttcaataaaacaaattaat 20141043  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 29556576 - 29556540
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaa 400  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  29556576 atttctcaattactcttatctttttcaataaaactaa 29556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 45646612 - 45646652
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  45646612 tttgtcaattacttttttctttttcaataaaactaattaat 45646652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 21535899 - 21535852
Alignment:
Q  358 ggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21535899 ggtatgatttgtcaattattcttatatttttcaataaaactaattaat 21535852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 36320045 - 36320004
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  36320045 atttgtcaattactcttatctttttcaataaaactaattaat 36320004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 1674844 - 1674804
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1674844 tttgtcaattattcttatatttttcaataaaactaattaat 1674804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 788361 - 788320
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  788361 atttgtcaattattctaatatttttcaataaaactaattaat 788320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 2655725 - 2655766
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  2655725 atttgtcaattactcttatatttttcaataaaactaattaat 2655766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 10430598 - 10430557
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||| ||||||||||||||||    
T  10430598 atttgtcaattactcttatcttttttaataaaactaattaat 10430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 11238320 - 11238280
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  11238320 tttggcaattattcttatatttttcaataaaactaattaat 11238280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 13254830 - 13254794
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13254830 tcaattactcttatctttttcaataaaactaattaat 13254794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 406
Target Start/End: Original strand, 23698777 - 23698818
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaatt 406  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  23698777 tttgtcaattactcttatatttttaaataaaactaattaatt 23698818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 10101741 - 10101709
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaat 401  Q
    ||||||| |||||||||||||||||||||||||    
T  10101741 tcaattactcttatctttttcaataaaactaat 10101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 2743017 - 2742968
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  2743017 agggtatgatttgtcaattatttttatatttttcaataaaactaattaat 2742968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 5870768 - 5870809
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  5870768 atttgtcaattattcttatcattttcaataaaactaattaat 5870809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 9455247 - 9455288
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  9455247 atttgtcaattattcttatatttttcaataaaactaattaat 9455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 14896642 - 14896683
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  14896642 atttgtcaattactcttatctttttcaataaaactaattaat 14896683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 7578278 - 7578238
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  7578278 tttgtcaattattcttatatttttcaataaaactaattaat 7578238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 32233642 - 32233682
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  32233642 tttgtcaattactcttatctttttcaataaaactaattaat 32233682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 34146197 - 34146237
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  34146197 tttgtcaattactcttatctttttcaataaaactaattaat 34146237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 16599449 - 16599408
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  16599449 atttatcaattactcttatctttttcaataaaactaattaat 16599408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 38457284 - 38457325
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  38457284 atttatcaattatttttatctttttcaataaaactaattaat 38457325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 27231787 - 27231827
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  27231787 tttgttaattattcttatttttttcaataaaactaattaat 27231827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 30887936 - 30887896
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  30887936 tttgtcaattactcttatcttttttaataaaactaattaat 30887896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 16393711 - 16393758
Alignment:
Q  358 ggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  16393711 ggtacgatttgtcaattacttttagctttttcaataaaactaattaat 16393758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Complemental strand, 45083091 - 45083057
Alignment:
Q  371 aattattcttatctttttcaataaaactaattaat 405  Q
    ||||| |||||||||||||||||||||||||||||    
T  45083091 aattactcttatctttttcaataaaactaattaat 45083057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 34038896 - 34038945
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||||||||||||  |||||||||||||||||| || |||||    
T  34038896 agggcatgatttgtcaattatatttatctttttcaataaaaatagttaat 34038945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 38401579 - 38401620
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||| ||||||| ||||||||    
T  38401579 atttgtcaattactcttatcttttttaataaaattaattaat 38401620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 1530665 - 1530625
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||| ||||||||||||||| ||||||    
T  1530665 tttgtcaattactcttatttttttcaataaaactgattaat 1530625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 25496663 - 25496703
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||| ||||| | |||||||||||||||||||||||||||    
T  25496663 tttgttaattacttttatctttttcaataaaactaattaat 25496703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 39628356 - 39628320
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  39628356 tcaattactcttatttttttcaataaaactaattaat 39628320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 39637906 - 39637870
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  39637906 tcaattactcttatttttttcaataaaactaattaat 39637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 43026756 - 43026720
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  43026756 tcaattattcttatatttttcaataaaattaattaat 43026720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Complemental strand, 44666243 - 44666215
Alignment:
Q  377 tcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||||||||||||||    
T  44666243 tcttatctttttcaataaaactaattaat 44666215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 46659 - 46610
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  46659 agggtatgatttgtcaattattcttataattttcaataaaattaattaat 46610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 9095846 - 9095805
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  9095846 atttgtcaattattcttatatttttcaataaaactaattaat 9095805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 2437911 - 2437871
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  2437911 tttgtcaattattcttatttttttcaataaaactaattaat 2437871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 8049193 - 8049233
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8049193 tttgtcaattactcttatctttttcaataaaactaattaat 8049233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 14093862 - 14093822
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  14093862 tttgtcaattactcttatctttttcaataaaactaattaat 14093822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 25056504 - 25056544
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25056504 tttgtcaattactcttatctttttcaataaaactaattaat 25056544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 7972708 - 7972668
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  7972708 tttgtcaattattctaatatttttcaataaaactaattaat 7972668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Original strand, 9353140 - 9353174
Alignment:
Q  371 aattattcttatctttttcaataaaactaattaat 405  Q
    ||||| |||||||||||||||||||||||||||||    
T  9353140 aattactcttatctttttcaataaaactaattaat 9353174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 403
Target Start/End: Original strand, 34889075 - 34889113
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaatta 403  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  34889075 tttgttaattactcttatctttttcaataaaactaatta 34889113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 4122794 - 4122835
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||| |||||||||||||||||||| ||||||||    
T  4122794 atttctcaattactcttatctttttcaataaaattaattaat 4122835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 6111200 - 6111159
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||| |||||||||||| ||||||||||||||||    
T  6111200 atttatcaattactcttatctttttaaataaaactaattaat 6111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 7833521 - 7833569
Alignment:
Q  358 ggtatgatttgtcaattattcttatctttttcaataaaactaattaatt 406  Q
    |||| ||||| ||||||| |||||||||||| ||||||| |||||||||    
T  7833521 ggtacgatttttcaattactcttatcttttttaataaaattaattaatt 7833569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 21527400 - 21527360
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||| || ||||||| ||||||||||||||    
T  21527400 tttgtcaattattctaatatttttcattaaaactaattaat 21527360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 6949104 - 6949145
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  6949104 atttgtcaattactcttatctttttcaataaaactaattaat 6949145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 405
Target Start/End: Original strand, 25493830 - 25493879
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  25493830 agggtacgatttgacaattactcttatctttttcaataaaactaattaat 25493879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 49263005 - 49263050
Alignment:
Q  360 tatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  49263005 tatgatttatcaattactcttatctttttcaataaaactaattaat 49263050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 50720912 - 50720953
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  50720912 atttgtcaattactcttatctttttcaataaaactaattaat 50720953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 9089689 - 9089649
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  9089689 tttgtcaattactcttatctttttcaataaaactaattaat 9089649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 24538379 - 24538341
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaatta 403  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  24538379 tttgtcaattattcttatatttttcaataaaactaatta 24538341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 45635528 - 45635487
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  45635528 atttgtcaattactcttatatttttcaataaaactaattaat 45635487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 24074186 - 24074146
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  24074186 tttgtcaattactcttaactttttcaataaaactaattaat 24074146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 37210059 - 37210023
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaat 401  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37210059 tttgtcaattatttttatctttttcaataaaactaat 37210023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 399
Target Start/End: Complemental strand, 37371479 - 37371445
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaacta 399  Q
    |||||||||||||||||| ||||||||||||||||    
T  37371479 tttgtcaattattcttatatttttcaataaaacta 37371445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 38434306 - 38434272
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaatta 403  Q
    |||||||||||||| ||||||||||||||||||||    
T  38434306 tcaattattcttatatttttcaataaaactaatta 38434272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 25490475 - 25490516
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| ||||||| |||||||||||| ||||||||    
T  25490475 atttgtcaattactcttatcattttcaataaaaataattaat 25490516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 21342285 - 21342249
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaa 400  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  21342285 atttgttaattactcttatctttttcaataaaactaa 21342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Complemental strand, 21956541 - 21956513
Alignment:
Q  377 tcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||||||||||||||    
T  21956541 tcttatctttttcaataaaactaattaat 21956513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 34032072 - 34032032
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||| ||||| | |||||||||||||||||||||||||||    
T  34032072 tttgttaattagttttatctttttcaataaaactaattaat 34032032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 44273862 - 44273826
Alignment:
Q  55 attaaaacaaatttagccgattaaaacaaacttactc 91  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  44273862 attaaaacaaattcagccaattaaaacaaacttactc 44273826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 45666313 - 45666353
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  45666313 tttgtcaattacttttatctttttcaataaaacttattaat 45666353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 46016663 - 46016623
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaa 404  Q
    |||||| ||||| |||||||||||||||| |||||||||||    
T  46016663 atttgttaattactcttatctttttcaatcaaactaattaa 46016623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 46195760 - 46195800
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| | |||||||||||| ||||||||||||||    
T  46195760 tttgtcaattacttttatctttttcagtaaaactaattaat 46195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 46250054 - 46250094
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaa 404  Q
    |||||| ||||| |||||||||||||||| |||||||||||    
T  46250054 atttgttaattactcttatctttttcaatcaaactaattaa 46250094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 33659715 - 33659756
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  33659715 atttgtcaattactcttatctttttcaataaaactaattaat 33659756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 4316711 - 4316751
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4316711 tttgtcaattactcttatctttttcaataaaactaattaat 4316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 20171515 - 20171475
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  20171515 tttgtcaattactcttatctttttcaataaaactaattaat 20171475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 42756804 - 42756844
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  42756804 tttgtcaattattcttatatttttcaataaaactaattaat 42756844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 44898124 - 44898164
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  44898124 tttgtcaattactcttatctttttcaataaaactaattaat 44898164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 45273491 - 45273451
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  45273491 tttgtcaattactcttatctttttcaataaaactaattaat 45273451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 23081641 - 23081693
Alignment:
Q  227 ctcactttccatttctaaatatatagagtcagagacaatatccaataaaaact 279  Q
    |||||||| || |||||||||| |||||||| | |||||||||||||||||||    
T  23081641 ctcacttttcacttctaaatatctagagtcaaaaacaatatccaataaaaact 23081693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 32113426 - 32113390
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||| ||||||||||||||||||||||    
T  32113426 tcaattattcttatatttttcaataaaactaattaat 32113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 41541058 - 41541098
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  41541058 tttgtcatttactcttatctttttcaataaaactaattaat 41541098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 406
Target Start/End: Complemental strand, 158161 - 158126
Alignment:
Q  371 aattattcttatctttttcaataaaactaattaatt 406  Q
    ||||| ||||||||||||||||||||||||||||||    
T  158161 aattactcttatctttttcaataaaactaattaatt 158126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 405
Target Start/End: Complemental strand, 29408869 - 29408827
Alignment:
Q  363 gatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||| | |||||||||||||||||| ||||||||    
T  29408869 gatttgtcaattacttttatctttttcaataaaagtaattaat 29408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 4701038 - 4700997
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||| ||||||| |||||||||||| ||||||||    
T  4701038 atttgtcaattactcttatcgttttcaataaaattaattaat 4700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 12411667 - 12411700
Alignment:
Q  370 caattattcttatctttttcaataaaactaatta 403  Q
    ||||||||||||| ||||||||||||||||||||    
T  12411667 caattattcttatatttttcaataaaactaatta 12411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 12423727 - 12423760
Alignment:
Q  370 caattattcttatctttttcaataaaactaatta 403  Q
    ||||||||||||| ||||||||||||||||||||    
T  12423727 caattattcttatatttttcaataaaactaatta 12423760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 15507464 - 15507503
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  15507464 tttgtcaattactcttatctttttcaat-aaactaattaat 15507503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 21252594 - 21252634
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||  ||||||||||||||||||| ||||||||    
T  21252594 tttgtcaattacacttatctttttcaataaaattaattaat 21252634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 36244112 - 36244072
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||| ||||| ||||||||||||||||    
T  36244112 tttgtcaattactcttatattttttaataaaactaattaat 36244072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 406
Target Start/End: Original strand, 37814534 - 37814570
Alignment:
Q  370 caattattcttatctttttcaataaaactaattaatt 406  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  37814534 caattactcttatctttttcaataaaactaataaatt 37814570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 25290632 - 25290672
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  25290632 tttgtcaattattcttatatttttcaataaaactaattaat 25290672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 35793185 - 35793145
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  35793185 tttgtcaattactcttatctttttcaataaaactaattaat 35793145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 10026298 - 10026251
Alignment:
Q  358 ggtatgatttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  10026298 ggtacgatttgttaattactcttatctttttcaataaaactaattaat 10026251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 39432595 - 39432642
Alignment:
Q  356 agggtatgatttgtcaattattcttatctttttcaataaaactaatta 403  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  39432595 agggtatgatttgtcaattatttttatatttttcaataaaacttatta 39432642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 405
Target Start/End: Original strand, 2798619 - 2798657
Alignment:
Q  367 tgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  2798619 tgtcaattactcttatctttttcaataaaactaattaat 2798657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 4963011 - 4962973
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaatta 403  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4963011 tttgtcaattattcttatatttttcaataaaactaatta 4962973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 403
Target Start/End: Complemental strand, 39430676 - 39430638
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaatta 403  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39430676 tttgtcaattattcttatatttttcaataaaactaatta 39430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 2273587 - 2273547
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  2273587 tttgtcaattactcttatctttttcaataaaacttattaat 2273547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 10535083 - 10535043
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  10535083 tttgtcaattcctcttatctttttcaataaaactaattaat 10535043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 28226560 - 28226600
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  28226560 tttgtcaattgctcttatctttttcaataaaactaattaat 28226600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 37124186 - 37124226
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  37124186 tttgtaaattactcttatctttttcaataaaactaattaat 37124226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 44550042 - 44550083
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||| ||||||| |||||||||||||| ||||||||||||||    
T  44550042 atttctcaattactcttatctttttcattaaaactaattaat 44550083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 4567328 - 4567368
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||| || | |||||||||||||||||||||||||||    
T  4567328 tttgtcaactacttttatctttttcaataaaactaattaat 4567368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 15643351 - 15643387
Alignment:
Q  369 tcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  15643351 tcaattactcttatttttttcaataaaactaattaat 15643387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 39617556 - 39617596
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||| | |||||||||||||||||| ||||||||    
T  39617556 tttgtcaattacttttatctttttcaataaaattaattaat 39617596  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 405
Target Start/End: Original strand, 256757 - 256798
Alignment:
Q  364 atttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  256757 atttgtcaatttctcttatctttttcaataaaactaattaat 256798  T

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Target: scaffold1130 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 399 - 439
Alignment:
Q  365 tttgtcaattattcttatctttttcaataaaactaattaat 405  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  399 tttgtcaattattcttataattttcaataaaactaattaat 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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