View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3614_low_24 (Length: 254)
Name: NF3614_low_24
Description: NF3614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3614_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 40652353 - 40652119
Alignment:
| Q |
1 |
ggtctaggaggaggggaaaacccagttgtcttattccttgagcgagtagggctagttgagaacgaaccactctttcgagacattttgcgttaactttgtt |
100 |
Q |
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| T |
40652353 |
ggtctaggaggaggtgaaaacccagttgtcttattccttgagcgagtagggctagttgagaacgaaccactctttcgagacattttgcgttaactttgtt |
40652254 |
T |
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| Q |
101 |
attgagtactatagctgaatacaaatcaaatgttagagtaatgaaaacatgcatgattgaaacaaattcaaaagattatatgaaaactcaccaaaagggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
40652253 |
attgagtactatagctgaatacaaatcaaatgttagagtaatgaaaacatgcatgattgaaacaaattcaaaagattatatg-aaactcaccaaaagggg |
40652155 |
T |
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| Q |
201 |
aaataataaaaatgatcggagagttaatcgggattg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
40652154 |
aaataataaaaatgatcggagagttaatcgggattg |
40652119 |
T |
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