View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3615_low_11 (Length: 351)

Name: NF3615_low_11
Description: NF3615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3615_low_11
NF3615_low_11
[»] chr7 (12 HSPs)
chr7 (16-341)||(26619116-26619444)
chr7 (16-327)||(26621118-26621432)
chr7 (16-327)||(26608566-26608876)
chr7 (245-327)||(30089725-30089808)
chr7 (254-327)||(20277387-20277461)
chr7 (248-325)||(26225007-26225085)
chr7 (255-327)||(4685430-4685503)
chr7 (248-327)||(9242511-9242591)
chr7 (248-334)||(26205434-26205522)
chr7 (273-327)||(3374320-3374374)
chr7 (248-327)||(16170264-16170344)
chr7 (248-327)||(10022117-10022197)
[»] chr4 (13 HSPs)
chr4 (245-317)||(4881106-4881179)
chr4 (245-327)||(4904167-4904250)
chr4 (270-327)||(21539298-21539355)
chr4 (248-327)||(47066061-47066141)
chr4 (267-327)||(48464053-48464113)
chr4 (248-327)||(53300344-53300424)
chr4 (275-327)||(24559022-24559074)
chr4 (257-327)||(43600269-43600340)
chr4 (248-327)||(1152037-1152117)
chr4 (248-307)||(1684999-1685059)
chr4 (245-298)||(4923689-4923743)
chr4 (245-314)||(26075290-26075360)
chr4 (245-317)||(37751027-37751099)
[»] chr5 (20 HSPs)
chr5 (248-327)||(17037536-17037616)
chr5 (245-315)||(31571019-31571090)
chr5 (252-335)||(30786264-30786349)
chr5 (267-327)||(12042204-12042264)
chr5 (255-327)||(5079091-5079164)
chr5 (248-316)||(31069000-31069069)
chr5 (245-319)||(18191884-18191959)
chr5 (267-327)||(9333588-9333648)
chr5 (236-327)||(9354416-9354510)
chr5 (274-327)||(10869457-10869510)
chr5 (255-316)||(16411591-16411652)
chr5 (234-295)||(38450025-38450089)
chr5 (267-327)||(7410837-7410897)
chr5 (254-327)||(19984994-19985068)
chr5 (248-325)||(23679434-23679512)
chr5 (248-325)||(23855299-23855377)
chr5 (269-327)||(40402036-40402094)
chr5 (245-297)||(12004567-12004619)
chr5 (285-327)||(42076078-42076120)
chr5 (283-327)||(37233061-37233105)
[»] chr1 (16 HSPs)
chr1 (248-323)||(37097371-37097447)
chr1 (255-327)||(5911691-5911764)
chr1 (245-327)||(18308138-18308221)
chr1 (245-327)||(39368667-39368750)
chr1 (255-327)||(15214327-15214400)
chr1 (267-327)||(897468-897528)
chr1 (255-327)||(1843953-1844025)
chr1 (275-327)||(3399643-3399695)
chr1 (275-327)||(12189973-12190025)
chr1 (248-327)||(16222771-16222851)
chr1 (267-327)||(28636916-28636976)
chr1 (235-327)||(17112903-17112998)
chr1 (248-314)||(51758746-51758813)
chr1 (275-327)||(15204615-15204667)
chr1 (249-314)||(15193913-15193979)
chr1 (267-311)||(13208625-13208669)
[»] chr6 (19 HSPs)
chr6 (255-327)||(16734805-16734878)
chr6 (255-327)||(11936794-11936867)
chr6 (267-327)||(23264523-23264583)
chr6 (249-327)||(15690432-15690511)
chr6 (245-327)||(23904379-23904462)
chr6 (248-313)||(12591826-12591892)
chr6 (255-327)||(15361715-15361788)
chr6 (267-327)||(11948774-11948834)
chr6 (245-327)||(9631182-9631265)
chr6 (235-327)||(29667942-29668039)
chr6 (234-307)||(14669393-14669469)
chr6 (266-323)||(30481259-30481316)
chr6 (255-314)||(6684094-6684154)
chr6 (268-334)||(1942583-1942650)
chr6 (245-304)||(4591140-4591200)
chr6 (248-303)||(17719774-17719830)
chr6 (273-327)||(10935808-10935862)
chr6 (277-323)||(34374848-34374894)
chr6 (275-327)||(4485592-4485644)
[»] chr8 (20 HSPs)
chr8 (248-327)||(5528736-5528816)
chr8 (236-317)||(14997600-14997684)
chr8 (255-327)||(25638807-25638880)
chr8 (255-327)||(28249102-28249175)
chr8 (248-334)||(17634490-17634578)
chr8 (257-327)||(45356139-45356210)
chr8 (255-327)||(6403593-6403666)
chr8 (255-327)||(6801857-6801930)
chr8 (256-327)||(5650972-5651044)
chr8 (267-327)||(29345444-29345504)
chr8 (235-327)||(29553607-29553702)
chr8 (246-327)||(31347340-31347422)
chr8 (234-327)||(25637621-25637717)
chr8 (248-307)||(19369957-19370017)
chr8 (248-307)||(19448441-19448501)
chr8 (248-307)||(19532575-19532635)
chr8 (245-317)||(5000669-5000742)
chr8 (248-327)||(18766910-18766990)
chr8 (245-297)||(29118587-29118639)
chr8 (275-323)||(31369137-31369185)
[»] chr3 (17 HSPs)
chr3 (248-327)||(1627974-1628054)
chr3 (267-327)||(26707872-26707932)
chr3 (248-327)||(13845985-13846065)
chr3 (267-327)||(16457358-16457418)
chr3 (257-327)||(2550168-2550239)
chr3 (245-327)||(9633469-9633552)
chr3 (235-325)||(27259474-27259567)
chr3 (255-327)||(1654576-1654649)
chr3 (255-327)||(7407781-7407854)
chr3 (260-327)||(2943241-2943309)
chr3 (275-341)||(5498499-5498566)
chr3 (245-311)||(36035462-36035529)
chr3 (268-327)||(35082990-35083049)
chr3 (245-314)||(36035009-36035079)
chr3 (255-314)||(1613253-1613313)
chr3 (267-327)||(36035302-36035362)
chr3 (286-327)||(27713466-27713507)
[»] chr2 (11 HSPs)
chr2 (245-325)||(24479142-24479223)
chr2 (255-327)||(31342743-31342816)
chr2 (255-327)||(40016591-40016664)
chr2 (248-327)||(30266996-30267076)
chr2 (275-327)||(41573414-41573466)
chr2 (248-327)||(44920951-44921030)
chr2 (245-328)||(27151258-27151341)
chr2 (245-327)||(7702419-7702502)
chr2 (237-327)||(7718167-7718258)
chr2 (245-327)||(11017447-11017530)
chr2 (267-327)||(15513680-15513740)
[»] scaffold0576 (1 HSPs)
scaffold0576 (255-327)||(6699-6772)
[»] scaffold0684 (1 HSPs)
scaffold0684 (248-307)||(794-854)
[»] scaffold0069 (1 HSPs)
scaffold0069 (267-307)||(40745-40785)


Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 16 - 341
Target Start/End: Complemental strand, 26619444 - 26619116
Alignment:
Q  16 aaagcaagattaattaatcaagagttagattcaagtcatgagacaatgacatccaattttataagctacaccctctgcccaagagttagattcaagtcac 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26619444 aaagcaagattaatcaatcaagagttagattcaagtcatgagacaatgacatccaattttataagctacaccctctgctcaagagttagattcaagtcac 26619345  T
Q  116 aagacaatgacatccgtttttataagctaaactctatggtcactattataag-gnnnnnnnnncaccttttatattcattgaacaactcacgtatttggt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||  ||||||||||     
T  26619344 aagacaatgacatccgtttttataagctaaactctatggtcactattataagaagaaaaaaaacaccttttatattcattgaacaacctacgtatttggc 26619245  T
Q  215 caatattgttgatcaaatacacactacaac--aattgacatctagtaacacttgaaattgttactaaatcaagaaaaatgttactgattaaatttagtaa 312  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26619244 caatattgttgatcaaatacacactacaacataattgacatctagtaacacttgaaattgttactaaatcaagaaaaatgttactgattaaatttattaa 26619145  T
Q  313 catttaaacaattgtaggtaaatcctatg 341  Q
    ||||| |||||||||||||||||||||||    
T  26619144 catttgaacaattgtaggtaaatcctatg 26619116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 16 - 327
Target Start/End: Complemental strand, 26621432 - 26621118
Alignment:
Q  16 aaagcaagattaattaatcaagagttagattcaagtcatgagacaatgacatccaattttataagctacaccctctgcccaagagttagattcaagtcac 115  Q
    ||||||||||| || ||| || || |||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||| |||| |     
T  26621432 aaagcaagattgatcaattaaaagatagattcaagtcatgagacaataaaatccatttttataagctacaccctctgccaaagagttagatttaagtaat 26621333  T
Q  116 aagacaatgacatccgtttttataagctaaactctatggtcactattataaggnnnnnnnnncaccttttatattcattgaacaactcacgtatttggtc 215  Q
     |||||||||||||| ||||||||| ||| || || |  ||| |||||||||          ||||||||||||||||||||||| | ||||||||||||    
T  26621332 gagacaatgacatccatttttataaactacaccctctaatcaatattataagaagaaaaaaacaccttttatattcattgaacaagttacgtatttggtc 26621233  T
Q  216 aatattgttgatcaaatacacactacaac--aattgacatctagtaacacttg-aaattgttactaaatcaagaaaaatgttactgattaaatttagtaa 312  Q
    |||| ||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||    
T  26621232 aataatgttgatcaaatacacactacaacttaatggacatctagtaacacttgaaaattgttactaaattaagaaaaatgttactgattaaatttagcaa 26621133  T
Q  313 catttaaacaattgt 327  Q
    |||||||||||||||    
T  26621132 catttaaacaattgt 26621118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 16 - 327
Target Start/End: Complemental strand, 26608876 - 26608566
Alignment:
Q  16 aaagcaagattaattaatcaagagttagattcaagtcatgagacaatgacatccaattttataagctacaccctctgcccaagagttagattcaagtcac 115  Q
    ||||||||||| || |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    ||||||| |||||||||||||||||    
T  26608876 aaagcaagattgatcaatcaaaagttagattcaagttatgagacaatgacatccatttttataagctacac----tgcccaaaagttagattcaagtcac 26608781  T
Q  116 aagacaatgacatccgtttttataagctaaactctatggtcactattataaggnnnnnnnnncaccttttatattcattgaacaactcacgtatttggtc 215  Q
     |||||||||||||| ||||||||||| | || || || |||||||| ||||          ||| ||||||||||||| || |||| ||||||||||||    
T  26608780 gagacaatgacatccatttttataagcaacaccctctgctcactattttaagaaggaaaaaacacattttatattcattaaataacttacgtatttggtc 26608681  T
Q  216 aatattgttgatcaaatacacactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaa 312  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  26608680 aataatgttgatcaaatacacactacaacataattgacatctagtaacatttgaaaattgttatgaaatcaagaaaaatgttactgattaaatttagtaa 26608581  T
Q  313 catttaaacaattgt 327  Q
    ||||| |||||||||    
T  26608580 catttgaacaattgt 26608566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 30089725 - 30089808
Alignment:
Q  245 aattgacatctagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  30089725 aattgacatctagtaacacttgaaaactgttactaaatcaagaaaaatgttactgattatatttagtaacatttgaacaattgt 30089808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 20277461 - 20277387
Alignment:
Q  254 ctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| |||| |||| |||||||||| |||||| ||| | |||||||||||||||||||||||||||||    
T  20277461 ctagtaacactcgaaaattgtaactaaatcaaaaaaaatattattaattaaatttagtaacatttaaacaattgt 20277387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 26225085 - 26225007
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaatt 325  Q
    |||||| || |||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||| || |||||||    
T  26225085 tgacatttaataacacttgaaaattgtaactaaatcaagaaaaatgatactaattaaatttagtaacacttgaacaatt 26225007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 4685503 - 4685430
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||| | ||||||||||| |||| || |||||||||    
T  4685503 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacacttgaacaattgt 4685430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 9242591 - 9242511
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||| ||||||| ||||||||| |||||| || |||||||||    
T  9242591 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgtaacacttgaacaattgt 9242511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 26205522 - 26205434
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaatt-gtaggtaaa 334  Q
    |||||| |||| |||||||||| || | ||||||||||||||||||||||| |||||||||||||||| || || |||| |||||||||    
T  26205522 tgacatttagtgacacttgaaaattataactaaatcaagaaaaatgttactaattaaatttagtaacacttgaaaaattggtaggtaaa 26205434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 3374320 - 3374374
Alignment:
Q  273 ttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||| |||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  3374320 ttaccaaatcaagaaaaatgttattgattaaattaagtaacatttgaacaattgt 3374374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 16170264 - 16170344
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||| ||||||||||| |||| || ||||||  |||| ||||||| |||||||||||||||| ||||||||||||    
T  16170264 tgacatttagcaacacttgaaaattgtaaccaaatcacaaaaagtgttactaattaaatttagtaacacttaaacaattgt 16170344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 10022117 - 10022197
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| |||||||| |||||| |||| |||||||||  |||||||||||| ||||| ||||||||||  | |||||||||    
T  10022117 tgacatttagtaacaattgaaaattgtaactaaatcagaaaaaatgttactaattaagtttagtaacacatgaacaattgt 10022197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 4881179 - 4881106
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacattt 317  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4881179 aattgacatccagtaacacttgaaaattgttactaaatcaagaaaaatgttactgattaaatttagtaatattt 4881106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 4904250 - 4904167
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||| ||||| |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||    
T  4904250 aattaacatccagtaacacttaaaaattgttactaaatcatgaaaaatgttactgattaaatttagtaacatttgtacaattgt 4904167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 21539355 - 21539298
Alignment:
Q  270 ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21539355 ttgtaactaaatcaaggaaaatgttactgattaaatttagtaacatttaaacaattgt 21539298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 47066141 - 47066061
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||  | |||||||||    
T  47066141 tgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgt 47066061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 48464053 - 48464113
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||||    
T  48464053 aaattgttactaaataaataaaaatgttactaattaaatttagtaacatttgaacaattgt 48464113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 53300344 - 53300424
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||||| | ||||||||||||||||  |||||||||||    
T  53300344 tgacatttagtaacacttgaaaattgtaattaaatcaagaaaaatgttagtaattaaatttagtaacacctaaacaattgt 53300424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 24559074 - 24559022
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  24559074 actaaatcaagaaaaatgttactaattaaatttagtaacatttgaacgattgt 24559022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 43600269 - 43600340
Alignment:
Q  257 gtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| || | || |||||||||    
T  43600269 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaaaacttgaacaattgt 43600340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 1152037 - 1152117
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||| ||||||||||| |||| ||||||| ||||||||||||||| ||||||||| | |||| | ||||||||||    
T  1152037 tgacatttagcaacacttgaaaattgtaactaaattaagaaaaatgttactaattaaattttgcaacactcaaacaattgt 1152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 1685059 - 1684999
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  1685059 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 1684999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 4923743 - 4923689
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactg 298  Q
    |||| ||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  4923743 aattaacatccagtaacacttaaaaattgttactaaatcaagaaaaatgttactg 4923689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 26075360 - 26075290
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaaca 314  Q
    |||||| ||||| ||||| |||||| ||||||||| ||||||||||  |||||| | ||||||||||||||    
T  26075360 aattgaaatctaataacaattgaaaattgttactagatcaagaaaatggttactaagtaaatttagtaaca 26075290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 37751099 - 37751027
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacattt 317  Q
    |||||||||| |||||||  ||||| |||| |||||||||| |||||||||||| |||||| | ||||||||||    
T  37751099 aattgacatccagtaacatatgaaaattgtcactaaatcaa-aaaaatgttactaattaaaatcagtaacattt 37751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 17037536 - 17037616
Alignment:
Q  248 tgacatctagtaacacttgaaatt-gttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  17037536 tgacatttagtaacacttgaaaatcgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgt 17037616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 31571019 - 31571090
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacat 315  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||    
T  31571019 aattgacatctagtaacacttgaaaattgttattaaaacaagaaaaatgttactgattaaaattagtaacat 31571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 30786264 - 30786349
Alignment:
Q  252 atctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattg-taggtaaat 335  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||| || ||||| |||||||||    
T  30786264 atctagtaacacttgaaaattgtaacttaatcaagaaaaatgttactgattcaatttagtaacatttgaataattgttaggtaaat 30786349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 12042264 - 12042204
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  12042264 aaattgtaactaaatcaagaaaaatgttactgattcaatttagtaacatttgaacaattgt 12042204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 5079164 - 5079091
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  5079164 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 5079091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 31069069 - 31069000
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatt 316  Q
    |||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  31069069 tgacatttagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaacatt 31069000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 18191959 - 18191884
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaa 319  Q
    |||||| || |||||||| |||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  18191959 aattgagatttagtaacaattgaaaattgtaactaaattaagaaaaatgttactaattaaatttagtaacatttaa 18191884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 9333648 - 9333588
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| || |||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  9333648 aaattgtaacaaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgt 9333588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 9354510 - 9354416
Alignment:
Q  236 cactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||  ||||| || |||||||| |||||| |||| ||| ||||||||||||||||||| |||||||||| |||||||| | |||||||    
T  9354510 cactacaacatgattgagatttagtaacaattgaaaattgtaactgaatcaagaaaaatgttactaattaaatttaataacatttgagcaattgt 9354416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 10869457 - 10869510
Alignment:
Q  274 tactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||    
T  10869457 tactaaatcatgaaaattgttactaattaaatttagtaacatttgaacaattgt 10869510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 16411591 - 16411652
Alignment:
Q  255 tagtaacacttgaaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatt 316  Q
    |||||||| |||||| | ||||||||||| |||||||||||||||||| || ||||||||||    
T  16411591 tagtaacatttgaaaatattactaaatcacgaaaaatgttactgattatatctagtaacatt 16411652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 38450089 - 38450025
Alignment:
Q  234 cacactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgtta 295  Q
    ||||||||||||  |||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  38450089 cacactacaacataattgacatctagtaacacatgaaaattgttaccaaatcaagaaaaatgtta 38450025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 7410837 - 7410897
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| |||||||||| |||||||||||| ||||||||||| |||| || |||||||||    
T  7410837 aaattgtaactaaatcaaaaaaaatgttactaattaaatttagcaacacttgaacaattgt 7410897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 19984994 - 19985068
Alignment:
Q  254 ctagtaacacttgaaattgtta-ctaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| |||| || || |||||||||| ||||||||||| |||| |||||||||||||| || ||||||    
T  19984994 ctagtaacactcgaaaatggtaactaaatcaaggaaaatgttactaattagatttagtaacatttgaataattgt 19985068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 23679434 - 23679512
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaatt 325  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||| | ||||||||| | ||||||  |||||||    
T  23679434 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaatt 23679512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 23855377 - 23855299
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaatt 325  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||| | ||||||||| | ||||||  |||||||    
T  23855377 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaatt 23855299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 40402094 - 40402036
Alignment:
Q  269 attgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| || ||| |||||||||    
T  40402094 attgtgactaaataaagaaaaatgttactaattaaatttagttacgtttgaacaattgt 40402036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 12004619 - 12004567
Alignment:
Q  245 aattgacatctagtaacacttgaaattgttactaaatcaagaaaaatgttact 297  Q
    |||||| || |||||||| |||||||| | |||||||||||||||||||||||    
T  12004619 aattgaaatttagtaacaattgaaattctaactaaatcaagaaaaatgttact 12004567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 42076078 - 42076120
Alignment:
Q  285 gaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||    
T  42076078 gaaaattgttactaattaaatttagtaacatttgaacaattgt 42076120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 37233061 - 37233105
Alignment:
Q  283 aagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||| |||||| ||||||||||||||||||| | |||||||    
T  37233061 aagaaaaaagttactaattaaatttagtaacatttgagcaattgt 37233105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 37097447 - 37097371
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaa 323  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  37097447 tgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactgataaaatttagtaacatttgaacaa 37097371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 5911764 - 5911691
Alignment:
Q  255 tagtaacacttgaaattgtta-ctaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5911764 tagtaacacttgaaaattttaactaaatcaagaaaaatgttactgattaaatttagtaacacttgaacaattgt 5911691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 18308138 - 18308221
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| | ||| ||||||||  ||||||||    
T  18308138 aattgacatctagtaacatttgaaaattgttactaaatcaagaaaaatgttacagattacaattattaacatttctacaattgt 18308221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 39368750 - 39368667
Alignment:
Q  245 aattgacatctagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||||| | |||||  ||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||    
T  39368750 aattgacatctagtaacccatgaaaaatgttactaaatcaagaaaaatgttactaattaaaattagtcacatttatacaattgt 39368667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 15214327 - 15214400
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||  ||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  15214327 tagtaacacttgaaaattgcaactaaatcaagaaaaattttactaattaaatttagtaatatttgaacaattgt 15214400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 897468 - 897528
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||| || |||||||||    
T  897468 aaattgttactaaatgaagaaaaatgttcctaattaaatttagtaacaattgaacaattgt 897528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 1843953 - 1844025
Alignment:
Q  255 tagtaacacttgaaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| ||||||| |||  |  ||||||||||||||||||| ||||||||||||||| |||||||||    
T  1843953 tagtaacacttaaaattgtaactggaataagaaaaatgttactgattgaatttagtaacatttgaacaattgt 1844025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 3399643 - 3399695
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  3399643 actaaatcatgaaaaatgttactaattaaatttagtaacatttgaacaattgt 3399695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 12189973 - 12190025
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  12189973 actaaatcaagaaaaatattactaattaaatttagtaacatttgaacaattgt 12190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 16222771 - 16222851
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||||||| || ||||||||||||| || || ||||||    
T  16222771 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaataaaatttagtaacacttgaataattgt 16222851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 28636916 - 28636976
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||||||||| || ||||||    
T  28636916 aaattgtaactaaatcaagaaaaatgttactaattcaatttagtaacatttgaataattgt 28636976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 17112903 - 17112998
Alignment:
Q  235 acactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||  ||||| ||||||||| | |||||| ||||||||||||||||||||||  ||||  |||||||| |||||| || |||||||||    
T  17112903 acactacaacataattgaaatctagtaataattgaaaattgttactaaatcaagaaaaatagtactagttaaattttgtaacacttgaacaattgt 17112998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 51758746 - 51758813
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaaca 314  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||||| | ||||||||||| ||||    
T  51758746 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaaca 51758813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 15204615 - 15204667
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||||||||||| || | |||||||||||||| || |||||||||    
T  15204615 actaaatcaagaaaaatgttgctaactaaatttagtaacacttgaacaattgt 15204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 15193913 - 15193979
Alignment:
Q  249 gacatctagtaacacttgaaatt-gttactaaatcaagaaaaatgttactgattaaatttagtaaca 314  Q
    ||||| ||||||||||||||| | |  || |||||||||||||||||||| |||||||||| |||||    
T  15193913 gacatttagtaacacttgaaaatagcaacgaaatcaagaaaaatgttactaattaaatttattaaca 15193979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 13208625 - 13208669
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagta 311  Q
    ||||||| | ||||| ||||||||||||||| |||||||||||||    
T  13208625 aaattgtaattaaattaagaaaaatgttactaattaaatttagta 13208669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 16734805 - 16734878
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  16734805 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacatttgaacaattgt 16734878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 11936867 - 11936794
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  11936867 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 11936794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 23264583 - 23264523
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  23264583 aaattgttactaaatcaagaaaattgttactaattaaatttagtaacattcgaacaattgt 23264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 15690432 - 15690511
Alignment:
Q  249 gacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||| |||||||| |||||| |||| ||||||||||||||||||||||| |||||||||||| ||| | ||||||||||    
T  15690432 gacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtgacactcaaacaattgt 15690511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 23904462 - 23904379
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| |||||||||||||||||| ||| |||||||| |||||||| |||||| | | ||||||||||||||| |||||||||    
T  23904462 aattgagatctagtaacacttgaaaattgctactaaatgaagaaaaaagttactaaatcaatttagtaacatttgaacaattgt 23904379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 12591826 - 12591892
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaac 313  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||| | |||||||||||||||    
T  12591826 tgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaac 12591892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 15361715 - 15361788
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  15361715 tagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 15361788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 11948834 - 11948774
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  11948834 aaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 11948774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 9631265 - 9631182
Alignment:
Q  245 aattgacatctagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| || |||||||||||||||  | ||||||||||||||| || |||||| | ||||||||||||||||| |||||||||    
T  9631265 aattgagatttagtaacacttgaaaactattactaaatcaagaagaacgttactaagtaaatttagtaacatttgaacaattgt 9631182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 29668039 - 29667942
Alignment:
Q  235 acactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaa--gaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||  ||||| |||| |||||| |||||| |||| || |||||||  ||||||||||||| ||||||||||||||||||| |||||||||    
T  29668039 acactacaacataattgagatcttgtaacaattgaaaattgtaacgaaatcaaaagaaaaatgttactaattaaatttagtaacatttgaacaattgt 29667942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 14669469 - 14669393
Alignment:
Q  234 cacactacaacaat--tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    |||||||| |||||  |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  14669469 cacactactacaataatgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 14669393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 30481316 - 30481259
Alignment:
Q  266 gaaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaa 323  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||| || |||||    
T  30481316 gaaattgttactaaatcaagaaaaatgttgctaattaaatctagtaacaattgaacaa 30481259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 6684094 - 6684154
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaaca 314  Q
    ||||||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||||||    
T  6684094 tagtaacacttaaaaattgtaacttaatcaagaaaaatgttactaattaaatttagtaaca 6684154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 1942583 - 1942650
Alignment:
Q  268 aattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattg-taggtaaa 334  Q
    |||||| ||||||||||||||||| |||||||| ||||||| |||||||| | |||||| ||||||||    
T  1942583 aattgtaactaaatcaagaaaaatattactgataaaatttaataacatttgagcaattgctaggtaaa 1942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 4591140 - 4591200
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaa 304  Q
    |||| |||| |||||||| |||||| || |||||||||||||||||||||||| |||||||    
T  4591140 aattaacatttagtaacatttgaaaattattactaaatcaagaaaaatgttaccgattaaa 4591200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 17719830 - 17719774
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaa 303  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| |||||    
T  17719830 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaa 17719774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 10935862 - 10935808
Alignment:
Q  273 ttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| ||||||||||||| |||| ||  |||||||||| |||||||||    
T  10935862 ttactaaatcatgaaaaatgttactaattatatccagtaacatttgaacaattgt 10935808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 34374848 - 34374894
Alignment:
Q  277 taaatcaagaaaaatgttactgattaaatttagtaacatttaaacaa 323  Q
    ||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  34374848 taaatcaagaaaaatgttactaattatattttgtaacatttgaacaa 34374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 4485644 - 4485592
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| |||||| |||| |||||||||||||| |||| || ||||||    
T  4485644 actaaatcaaggaaaatggtactaattaaatttagtaatatttgaataattgt 4485592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 5528736 - 5528816
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  5528736 tgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacactcaaacaattgt 5528816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 14997600 - 14997684
Alignment:
Q  236 cactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacattt 317  Q
    ||||||||||  ||||||||||||| |||||||||| || ||||||| |||||||||||||||||| ||||| ||||||||||||    
T  14997600 cactacaacatgattgacatctagtgacacttgaaaattattactaattcaagaaaaatgttactggttaaaattagtaacattt 14997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 25638807 - 25638880
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  25638807 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 25638880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 28249175 - 28249102
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  28249175 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 28249102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 17634578 - 17634490
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattg-taggtaaa 334  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| ||||| || |||||||| ||||||||    
T  17634578 tgacatttagtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttaataacacttgaacaattgataggtaaa 17634490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 45356210 - 45356139
Alignment:
Q  257 gtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  45356210 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 45356139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 6403593 - 6403666
Alignment:
Q  255 tagtaacacttgaaatt-gttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||| |||||||| || ||||||| ||||||||||||||| ||||||||||||||||||| | |||||||    
T  6403593 tagtaacaattgaaatttgtaactaaattaagaaaaatgttactaattaaatttagtaacatttgagcaattgt 6403666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 6801930 - 6801857
Alignment:
Q  255 tagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||||||  | |||||||||||| |||||||||||| |||||||||||||||| || |||||||||    
T  6801930 tagtaacacttgaaaactattactaaatcaataaaaatgttactaattaaatttagtaacagttgaacaattgt 6801857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 327
Target Start/End: Complemental strand, 5651044 - 5650972
Alignment:
Q  256 agtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||  | ||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||||    
T  5651044 agtaacacttgaaaactattactaaatcaagaaaaatgttactaattcaatttagcaacatttgaacaattgt 5650972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 29345444 - 29345504
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  29345444 aaattgtaactaaatcaagaaaaatattactaattaaatttagtaacctttgaacaattgt 29345504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 29553607 - 29553702
Alignment:
Q  235 acactacaaca--attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||  ||||| || |||||||| |||||| |||| || |||||||||||||||||||| ||||||||||| ||||||| | |||||||    
T  29553607 acactacaacatgattgagatttagtaacaattgaaaattgtaaccaaatcaagaaaaatgttactaattaaatttagcaacatttgagcaattgt 29553702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 31347340 - 31347422
Alignment:
Q  246 attgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||| || |||||||| |||||| |||| || ||||||||||||||| |||| ||||||||||||||||||| | |||||||    
T  31347340 attgaaatttagtaacaattgaaaattgtaaccaaatcaagaaaaatgctactaattaaatttagtaacatttgatcaattgt 31347422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 327
Target Start/End: Original strand, 25637621 - 25637717
Alignment:
Q  234 cacactacaacaat--tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||| |||||  |||||| ||||||||||||||| |||| ||||||| ||||||| ||||||| ||||||||||| |||| |  |||||||||    
T  25637621 cacactactacaataatgacatttagtaacacttgaaaattgtaactaaattaagaaaactgttactaattaaatttagcaacactcgaacaattgt 25637717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 19370017 - 19369957
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  19370017 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 19369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 19448441 - 19448501
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  19448441 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 19448501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 19532635 - 19532575
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  19532635 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattt 19532575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 5000669 - 5000742
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacattt 317  Q
    |||||| ||||||| ||| |||||| ||||||||| ||||  |||| ||||||| |||||||||||||||||||    
T  5000669 aattgagatctagttacaattgaaaattgttactacatcatcaaaattgttactaattaaatttagtaacattt 5000742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 18766910 - 18766990
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||| ||| | ||||||||| | |||| | ||||||||||    
T  18766910 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatattattaattaaattttgcaacactcaaacaattgt 18766990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 29118639 - 29118587
Alignment:
Q  245 aattgacatctagtaacacttgaaattgttactaaatcaagaaaaatgttact 297  Q
    |||||| |||||||||||||| |||||||| ||||| |||||| |||||||||    
T  29118639 aattgagatctagtaacacttaaaattgttgctaaaccaagaagaatgttact 29118587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 31369185 - 31369137
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaa 323  Q
    ||||||||| || |||||||||| ||||| |||||| ||||||||||||    
T  31369185 actaaatcacgataaatgttactaattaagtttagtgacatttaaacaa 31369137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 1628054 - 1627974
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||| || |||||||||    
T  1628054 tgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacttgaacaattgt 1627974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 26707872 - 26707932
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  26707872 aaatggttactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgt 26707932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 13845985 - 13846065
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  13845985 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 13846065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 16457418 - 16457358
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  16457418 aaattgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgt 16457358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 2550168 - 2550239
Alignment:
Q  257 gtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  2550168 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 2550239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 9633552 - 9633469
Alignment:
Q  245 aattgacatctagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| || |||||||||||||||  | |||||||||| | |||||||||||| |||||||||||| ||||||||||||||||    
T  9633552 aattgagatttagtaacacttgaaaactattactaaatcgaaaaaaatgttactaattaaatttagttacatttaaacaattgt 9633469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 27259567 - 27259474
Alignment:
Q  235 acactacaaca--attgacatctagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaatt 325  Q
    |||||||||||  ||||| || |||||||| ||||||  | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  27259567 acactacaacataattgagatttagtaacaattgaaaactattactaaatcaagcaaaatgttactaattaaatttagtaacatttgaacaatt 27259474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 1654576 - 1654649
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  1654576 tagtaacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 1654649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 7407854 - 7407781
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||| |||| || |||||||||    
T  7407854 tagtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagcaacacttgaacaattgt 7407781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 2943309 - 2943241
Alignment:
Q  260 acacttgaaatt-gttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  2943309 acacttgaaatttgtaattaaatcaagaaaaatgttactaattaaatttagtaacattcgaacaattgt 2943241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 5498499 - 5498566
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattg-taggtaaatcctatg 341  Q
    ||||||||||||||||||||||| ||||||||||||||| | | |||||||| |||||||| ||||||    
T  5498499 actaaatcaagaaaaatgttactaattaaatttagtaacttctgaacaattgttaggtaaaacctatg 5498566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 36035462 - 36035529
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagta 311  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||  ||||||| ||||||||||    
T  36035462 aattgacatctagtaacacttcaaaattgttactatatcaagaaaaataatactgatcaaatttagta 36035529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 35082990 - 35083049
Alignment:
Q  268 aattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||| |||||||||||||||||| | | |||||||||||| |||| |||||||||    
T  35082990 aattgttacaaaatcaagaaaaatgttagtaaataaatttagtaatatttgaacaattgt 35083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 36035009 - 36035079
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaaca 314  Q
    |||||||||||| | |||||| ||| ||| ||||||||||||||||||  |||| ||||||||||||||||    
T  36035009 aattgacatctaatgacacttcaaaattggtactaaatcaagaaaaataatactaattaaatttagtaaca 36035079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 1613313 - 1613253
Alignment:
Q  255 tagtaacacttgaaat-tgttactaaatcaagaaaaatgttactgattaaatttagtaaca 314  Q
    |||||||| ||||||  ||| ||||||||||||||||||||||| | ||||||||||||||    
T  1613313 tagtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtaaca 1613253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 36035302 - 36035362
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||||||  |||| |||||||||||||||| ||  ||||||||    
T  36035302 aaattggtactaaatcaagaaaaataatactaattaaatttagtaacaattgtacaattgt 36035362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 27713507 - 27713466
Alignment:
Q  286 aaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||| |||||| |||||||||||||||||||||| ||||||    
T  27713507 aaaaaagttactaattaaatttagtaacatttaaataattgt 27713466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 325
Target Start/End: Original strand, 24479142 - 24479223
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaatt 325  Q
    |||||| || ||||||||||||||| || |||||||||||||| || ||||||| ||||||||||||||||||| |||||||    
T  24479142 aattgagatatagtaacacttgaaaattattactaaatcaagataactgttactaattaaatttagtaacatttgaacaatt 24479223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 31342816 - 31342743
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  31342816 tagtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 31342743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 40016591 - 40016664
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||| || ||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  40016591 tagtaacacttgaaaattattattaaatcaagtaaaatgttactgattaaatttagtaacatttgaataattgt 40016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 30266996 - 30267076
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||  | |||||||||    
T  30266996 tgacatttagtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgt 30267076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 41573414 - 41573466
Alignment:
Q  275 actaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  41573414 actaaatcaagaaaaatgttactaattaaatttagtaacagttaaacaattgt 41573466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 44920951 - 44921030
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||  |||||||||||    
T  44920951 tgacatttagtaacacttgaaaattgtaactaaatcaa-aaaaatgttactaattaaatttagtaacacctaaacaattgt 44921030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 328
Target Start/End: Complemental strand, 27151341 - 27151258
Alignment:
Q  245 aattgacatctagtaacacttgaaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgta 328  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||| ||| |||||| ||||| ||| ||  |||||||||    
T  27151341 aattgacatctagtaataatttaaattgttactaaatcaagaaaaatgtcactaattaaaattagtgacacttgtacaattgta 27151258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 7702419 - 7702502
Alignment:
Q  245 aattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||||||||||| ||||| || ||||||||| || |||||||||| | |||||| ||||||||||||  ||||||||    
T  7702419 aattgacatctagtaacacatgaaaattattactaaattaaaaaaaatgttattaattaaaattagtaacatttgtacaattgt 7702502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 327
Target Start/End: Original strand, 7718167 - 7718258
Alignment:
Q  237 actacaacaattgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||| ||||| | |||| |||||| |||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||  | |||||||||    
T  7718167 actagaacaaatcacatttagtaatacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacatgaacaattgt 7718258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 11017447 - 11017530
Alignment:
Q  245 aattgacatctagtaacacttgaaatt-gttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    |||||| ||||||||||| ||||||   |||||||||| ||||||| ||||||| ||||||||||||||||||| | |||||||    
T  11017447 aattgagatctagtaacaattgaaaaccgttactaaataaagaaaattgttactaattaaatttagtaacatttgaccaattgt 11017530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 15513680 - 15513740
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||| | |||||||||||||||||||||  |||||||| |||||| || |||||||||    
T  15513680 aaattgtaagtaaatcaagaaaaatgttactagttaaattttgtaacacttgaacaattgt 15513740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 6699 - 6772
Alignment:
Q  255 tagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaatttagtaacatttaaacaattgt 327  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  6699 tagtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgt 6772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 854 - 794
Alignment:
Q  248 tgacatctagtaacacttgaaa-ttgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    |||||| ||| ||||||||||| |||| ||||||||||||||| ||||||| |||||||||    
T  854 tgacatttagcaacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattt 794  T

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Target: scaffold0069 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 40785 - 40745
Alignment:
Q  267 aaattgttactaaatcaagaaaaatgttactgattaaattt 307  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  40785 aaattgtaactaaatcaagaaaattgttactaattaaattt 40745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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