View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3616_high_9 (Length: 210)
Name: NF3616_high_9
Description: NF3616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3616_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 6717101 - 6717297
Alignment:
| Q |
1 |
ctctaggaatcctcttttgggtattctaaaaagtttcaaattttgattatttttgtgaacaaattttcttctttgtcatggaaatttctgttattggtaa |
100 |
Q |
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| T |
6717101 |
ctcttggaatcctcttttgggtattctaaaaagtttcaaattttgattatttttgtgaacaaattttcttctttgtcatggaaatttctgttattggtaa |
6717200 |
T |
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| Q |
101 |
ctctcaagtgaagtttggaagaactgattttgcttgtagagaacttggttatgttattttgaagaataattgtagattttcaaagggtggtgtttgt |
197 |
Q |
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| T |
6717201 |
ctctcaagtgaagtttggaagaactgattttgcttgtagagaacttggttatgttattttgaagaataattgtagattttcaaagggtggtgtttgt |
6717297 |
T |
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