View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3618_low_3 (Length: 241)
Name: NF3618_low_3
Description: NF3618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3618_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 43463010 - 43463222
Alignment:
| Q |
13 |
cagagaaaaagatttagactctaatgggatgccaattgacccatggagtttatgtacagtaagacaagtagaggagttgaaagcagtaatcaaagttctt |
112 |
Q |
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| T |
43463010 |
cagagaaaaagatttagactctaatgggatgccaattgatccatggagtttatgtacagtaagacaagtagaggagttgaaagcagtaatcaaagttctt |
43463109 |
T |
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| Q |
113 |
ccgctatggtcgactggcatcacaattgcagttacaataagccaacaatcgttttctgtggtccaagcaaccactatgaacagaaaagttcacaattttg |
212 |
Q |
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| T |
43463110 |
ccgctatggtcaactggcatcacaattgcagttacaataagccaacaatcgttttctgtggtccaagcaaccactatgaacagaatggttcacaattttg |
43463209 |
T |
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| Q |
213 |
agattccaccaac |
225 |
Q |
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| T |
43463210 |
agattccaccaac |
43463222 |
T |
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