View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3624_high_12 (Length: 277)
Name: NF3624_high_12
Description: NF3624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3624_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 6 - 259
Target Start/End: Original strand, 43344023 - 43344277
Alignment:
| Q |
6 |
agcagcacagatgaaacttataaagataatgataagtatccaactgagactagagttgaagcattctctcctccttatttggacgaggctttttataagt |
105 |
Q |
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| T |
43344023 |
agcaacacacatgaaacttataaagataatgataagtatccaactgagactagagttgaagcattctctcctccttatttggacgaggcttttaataagt |
43344122 |
T |
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| Q |
106 |
ataggccacaaattaatcaagatgcaactaaaa-agagttaaagtatggaaatacatttgaaacaaatttttcagtggaagatggggctgggttgacagc |
204 |
Q |
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| T |
43344123 |
ataggccacaaattaatcaaggtgcaactaaaaaagagttaaagtatggaaatacatttgaaacaaatttttcagtggaagatggggctgggttgacagc |
43344222 |
T |
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| Q |
205 |
taatgatataaaggtgacaatgtatgcaccacctttcactactcatggtttctcc |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43344223 |
taatgatataaaggtgacaatgtatgcaccacctttcactactcatggtttctcc |
43344277 |
T |
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