View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3624_high_16 (Length: 238)
Name: NF3624_high_16
Description: NF3624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3624_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1464713 - 1464934
Alignment:
| Q |
1 |
ttgagtcggtagtgaagctgaagggcctcgacattgacacacttaatactaattattcaatttaggcaaagcctgaacaatcttgaagaattagttcaat |
100 |
Q |
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| T |
1464713 |
ttgagtcggtagtgaagctgaagggcctcgacattgacacacttaatactaattattcaatttaggcaaaggctgcacaatcttgaagaattggttcaat |
1464812 |
T |
|
| Q |
101 |
atttttctcaggaaaaatattaataatgacgaagaaagactcagagacctaagctattttattggttttttctctttctcatctaagcttagataagata |
200 |
Q |
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| T |
1464813 |
atttttctcaggaaaaatattaataatgacgaagaaagactcagagacctaagctattttattggttttttctctttctcatctaagcttagataagata |
1464912 |
T |
|
| Q |
201 |
ttagtatctaacaagaattttg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
1464913 |
ttagtatctaacaagaattttg |
1464934 |
T |
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