View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3626_high_14 (Length: 445)
Name: NF3626_high_14
Description: NF3626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3626_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 10 - 431
Target Start/End: Complemental strand, 41735982 - 41735561
Alignment:
| Q |
10 |
aagaaaatctgaagactcataataattctcacaaaaagagtcatgatcacaagcctaatcacaatagtaataacaattatgttcctcatgttattaatct |
109 |
Q |
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| T |
41735982 |
aagaaaatctgaagactcataataattctcacaaaaagagttatgatcacaagcctaatcacaatagtaataacaattatgttcctcatgttattaatct |
41735883 |
T |
|
| Q |
110 |
cacctgcaaaagaaaattagttatgtttgtggtaatccatatcatcatgcacctcccagctcccattccaaacaatttataattaaccacatcaatagtg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735882 |
cacctgcaaaagaaaattagttatgtttgtggtaatccatatcatcatgcacctcccagctcccattccaaacaatttataattaaccacatcaatagtg |
41735783 |
T |
|
| Q |
210 |
tcacctcattcagtcaagttagctttaagaggattgtctttcctcttgcgatgtttgcactgaggtgcatgatgacctggcttaccacaaaggcgggcat |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
41735782 |
tcacctcattcagtcaagttagctttaagaggattgtctttcctcttgcgatgtttgcactgaggtgcatgatgacctggcttaccacaaaggcggccat |
41735683 |
T |
|
| Q |
310 |
agtaacacgaggaacataattgtcgcatggtatgtgatcttacctcttttgttaagccttttttgtgataagatttatcaatggtgattacttctgtttc |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735682 |
agtaacacgaggaacataattgtcgcatggtatgtgatcttacctcttttgttaagccttttttgtgataagatttatcaatggtgattacttctgtttc |
41735583 |
T |
|
| Q |
410 |
aactgattcttgtaatcctttc |
431 |
Q |
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|||||||||||||||||||||| |
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| T |
41735582 |
aactgattcttgtaatcctttc |
41735561 |
T |
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