View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3626_high_37 (Length: 208)
Name: NF3626_high_37
Description: NF3626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3626_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 4378193 - 4378364
Alignment:
| Q |
16 |
attaaagcattcaatttacaccatgttgtgtatttactacgtgcatgttagcatttagtgactgtcgtcgttggcgcaactttagctacgtcacacatta |
115 |
Q |
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| T |
4378193 |
attaaagcattcaatttacaccatgttgtgtatttactacgtgcatgttagcatttagtgactgtcgtcgttggcgcaactttagctacgtcacacatta |
4378292 |
T |
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| Q |
116 |
attcattcctaacttctattcatatatactcatcaaaatacatcttaagcaaattaaaggagtcaagagctttatat |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
4378293 |
attcattcctaacttctattcatatatactcatcaaaatacatcttaagc-----aaaggagtcaagagctttatat |
4378364 |
T |
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