View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3626_low_25 (Length: 286)

Name: NF3626_low_25
Description: NF3626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3626_low_25
NF3626_low_25
[»] chr2 (35 HSPs)
chr2 (1-169)||(11541282-11541450)
chr2 (177-281)||(10249380-10249483)
chr2 (177-279)||(32505648-32505749)
chr2 (177-281)||(9058479-9058582)
chr2 (185-281)||(28863462-28863557)
chr2 (177-281)||(33436098-33436201)
chr2 (178-281)||(13438343-13438445)
chr2 (178-281)||(40701478-40701580)
chr2 (177-281)||(7465733-7465836)
chr2 (178-281)||(17473020-17473122)
chr2 (178-281)||(27864704-27864806)
chr2 (178-281)||(28381653-28381755)
chr2 (177-281)||(5574486-5574589)
chr2 (177-281)||(20700814-20700917)
chr2 (177-281)||(30915462-30915565)
chr2 (178-279)||(4060685-4060785)
chr2 (185-281)||(19930818-19930913)
chr2 (185-281)||(40613900-40613995)
chr2 (177-281)||(38882809-38882914)
chr2 (208-281)||(38273140-38273213)
chr2 (185-281)||(38732361-38732456)
chr2 (185-281)||(42257200-42257295)
chr2 (185-277)||(2533131-2533221)
chr2 (185-281)||(26891502-26891597)
chr2 (177-281)||(33436210-33436313)
chr2 (225-279)||(3737989-3738043)
chr2 (185-277)||(43490128-43490219)
chr2 (226-281)||(36168883-36168938)
chr2 (220-281)||(2997485-2997546)
chr2 (208-281)||(13365382-13365455)
chr2 (220-281)||(17820002-17820063)
chr2 (225-281)||(3440025-3440081)
chr2 (220-281)||(45097733-45097794)
chr2 (229-281)||(3034981-3035033)
chr2 (229-281)||(3154193-3154245)
[»] chr7 (34 HSPs)
chr7 (178-281)||(38267040-38267142)
chr7 (177-281)||(7389388-7389491)
chr7 (178-281)||(19329842-19329944)
chr7 (185-281)||(3784002-3784097)
chr7 (177-281)||(8080381-8080484)
chr7 (177-281)||(19436185-19436288)
chr7 (177-281)||(36361911-36362014)
chr7 (178-281)||(4999512-4999614)
chr7 (177-281)||(3434561-3434664)
chr7 (177-281)||(36362025-36362128)
chr7 (177-281)||(38837216-38837319)
chr7 (177-281)||(40957706-40957809)
chr7 (178-281)||(35137533-35137635)
chr7 (185-281)||(3694374-3694469)
chr7 (227-281)||(32951491-32951545)
chr7 (208-281)||(8238242-8238315)
chr7 (185-281)||(21234408-21234503)
chr7 (185-281)||(35522883-35522978)
chr7 (185-281)||(18207187-18207281)
chr7 (185-281)||(38044204-38044299)
chr7 (185-281)||(39255922-39256016)
chr7 (185-273)||(46374808-46374895)
chr7 (239-281)||(11044238-11044280)
chr7 (220-281)||(36208214-36208275)
chr7 (185-281)||(22343368-22343463)
chr7 (185-281)||(41915748-41915843)
chr7 (227-281)||(16374822-16374876)
chr7 (219-281)||(27744307-27744369)
chr7 (177-245)||(10343597-10343664)
chr7 (185-281)||(26296651-26296746)
chr7 (215-281)||(2318241-2318307)
chr7 (185-279)||(7727913-7728006)
chr7 (208-281)||(46033799-46033872)
chr7 (185-281)||(40846111-40846206)
[»] chr8 (28 HSPs)
chr8 (177-281)||(14547921-14548024)
chr8 (178-281)||(504119-504221)
chr8 (178-281)||(12831047-12831149)
chr8 (178-281)||(23122595-23122697)
chr8 (178-281)||(15197333-15197435)
chr8 (185-281)||(10284629-10284724)
chr8 (178-281)||(34012294-34012396)
chr8 (178-281)||(40423941-40424043)
chr8 (177-279)||(37038478-37038579)
chr8 (178-281)||(1179938-1180040)
chr8 (179-281)||(5957831-5957932)
chr8 (177-281)||(44507085-44507188)
chr8 (219-281)||(8841430-8841492)
chr8 (185-281)||(15048180-15048274)
chr8 (225-281)||(9122231-9122287)
chr8 (185-281)||(10621085-10621180)
chr8 (185-281)||(43414579-43414674)
chr8 (185-281)||(16383384-16383479)
chr8 (177-281)||(4854861-4854964)
chr8 (185-281)||(16056399-16056494)
chr8 (185-281)||(17443832-17443927)
chr8 (185-281)||(34307223-34307318)
chr8 (225-281)||(42221561-42221617)
chr8 (227-281)||(15258927-15258981)
chr8 (185-281)||(24307791-24307886)
chr8 (185-262)||(14055609-14055685)
chr8 (185-281)||(30479472-30479567)
chr8 (225-281)||(38229474-38229530)
[»] chr4 (30 HSPs)
chr4 (177-281)||(48183047-48183150)
chr4 (178-281)||(41236347-41236449)
chr4 (177-281)||(480445-480548)
chr4 (177-281)||(50052426-50052529)
chr4 (178-281)||(11511460-11511562)
chr4 (177-281)||(29234243-29234346)
chr4 (178-281)||(6034044-6034146)
chr4 (178-277)||(54473535-54473633)
chr4 (177-281)||(29239885-29239988)
chr4 (177-281)||(42044365-42044468)
chr4 (178-281)||(3481654-3481756)
chr4 (177-281)||(23608234-23608337)
chr4 (177-281)||(24995105-24995208)
chr4 (185-281)||(31910199-31910294)
chr4 (225-281)||(41823928-41823984)
chr4 (178-279)||(50526171-50526271)
chr4 (225-281)||(29977931-29977987)
chr4 (185-281)||(53352564-53352658)
chr4 (186-280)||(28480267-28480360)
chr4 (186-280)||(28481142-28481235)
chr4 (186-280)||(28482017-28482110)
chr4 (185-281)||(19670714-19670809)
chr4 (185-281)||(40574786-40574881)
chr4 (225-281)||(48647724-48647780)
chr4 (220-281)||(17983741-17983802)
chr4 (220-281)||(50813890-50813951)
chr4 (185-281)||(47986215-47986310)
chr4 (185-281)||(55475198-55475293)
chr4 (185-281)||(55079711-55079807)
chr4 (185-281)||(32766965-32767060)
[»] chr6 (20 HSPs)
chr6 (178-281)||(32869678-32869780)
chr6 (178-281)||(17598554-17598656)
chr6 (185-281)||(22880656-22880751)
chr6 (177-281)||(6209463-6209566)
chr6 (177-281)||(11427615-11427720)
chr6 (185-281)||(31976255-31976350)
chr6 (178-281)||(29857827-29857929)
chr6 (185-281)||(23128125-23128220)
chr6 (190-281)||(31109398-31109488)
chr6 (177-281)||(15832576-15832679)
chr6 (185-281)||(15508022-15508117)
chr6 (185-281)||(15990040-15990135)
chr6 (185-281)||(30341358-30341453)
chr6 (179-281)||(946377-946478)
chr6 (220-281)||(28536486-28536545)
chr6 (185-281)||(31110759-31110852)
chr6 (225-281)||(4231594-4231650)
chr6 (178-281)||(31953028-31953130)
chr6 (177-281)||(12732481-12732584)
chr6 (233-281)||(30870068-30870116)
[»] chr3 (31 HSPs)
chr3 (178-281)||(53982011-53982113)
chr3 (177-281)||(54868893-54868996)
chr3 (178-281)||(33644200-33644302)
chr3 (177-281)||(17470404-17470507)
chr3 (177-281)||(49607413-49607516)
chr3 (185-281)||(52629307-52629402)
chr3 (177-281)||(27714889-27714992)
chr3 (178-281)||(8076393-8076495)
chr3 (179-281)||(31456690-31456791)
chr3 (177-281)||(11095353-11095454)
chr3 (185-281)||(26141530-26141625)
chr3 (185-281)||(33118849-33118944)
chr3 (185-281)||(48587089-48587184)
chr3 (185-281)||(30801731-30801826)
chr3 (177-281)||(24699952-24700055)
chr3 (189-281)||(26754706-26754797)
chr3 (177-281)||(35536625-35536728)
chr3 (177-264)||(36707439-36707525)
chr3 (185-281)||(11347920-11348015)
chr3 (225-281)||(20764913-20764969)
chr3 (185-281)||(41189762-41189857)
chr3 (225-281)||(51419358-51419414)
chr3 (178-281)||(14623837-14623939)
chr3 (177-281)||(8956761-8956864)
chr3 (233-281)||(9563053-9563101)
chr3 (185-281)||(47531872-47531967)
chr3 (179-281)||(13898053-13898154)
chr3 (228-281)||(11907420-11907473)
chr3 (220-281)||(36331327-36331388)
chr3 (231-281)||(48375704-48375754)
chr3 (177-281)||(35093584-35093687)
[»] chr1 (32 HSPs)
chr1 (177-279)||(2581914-2582015)
chr1 (178-281)||(9474874-9474976)
chr1 (178-281)||(27564733-27564835)
chr1 (177-277)||(38632323-38632422)
chr1 (185-281)||(44548374-44548469)
chr1 (177-281)||(50630457-50630560)
chr1 (178-281)||(3000319-3000421)
chr1 (178-277)||(48716284-48716382)
chr1 (177-281)||(8346386-8346489)
chr1 (177-281)||(38595153-38595256)
chr1 (178-281)||(47452318-47452420)
chr1 (177-279)||(51898683-51898784)
chr1 (185-281)||(32813254-32813349)
chr1 (177-281)||(41758804-41758907)
chr1 (178-281)||(43132-43234)
chr1 (185-281)||(5958998-5959093)
chr1 (209-281)||(13414791-13414863)
chr1 (185-277)||(26274439-26274530)
chr1 (178-278)||(37649198-37649297)
chr1 (185-277)||(44453986-44454077)
chr1 (227-279)||(11152378-11152430)
chr1 (185-281)||(49811525-49811620)
chr1 (185-281)||(50590998-50591093)
chr1 (208-281)||(45044558-45044631)
chr1 (177-277)||(23597093-23597192)
chr1 (225-281)||(26440780-26440836)
chr1 (227-279)||(48489348-48489400)
chr1 (225-279)||(3302533-3302587)
chr1 (227-274)||(44334175-44334222)
chr1 (225-279)||(6260916-6260970)
chr1 (208-281)||(37926436-37926509)
chr1 (185-281)||(41608491-41608586)
[»] chr5 (25 HSPs)
chr5 (177-281)||(13811651-13811754)
chr5 (185-281)||(18520882-18520977)
chr5 (177-281)||(36732940-36733043)
chr5 (177-281)||(2740273-2740376)
chr5 (178-281)||(35785199-35785301)
chr5 (178-281)||(40145407-40145509)
chr5 (178-281)||(33149636-33149738)
chr5 (178-279)||(14831814-14831914)
chr5 (178-277)||(42414304-42414402)
chr5 (185-281)||(28177782-28177877)
chr5 (185-281)||(35943890-35943985)
chr5 (185-281)||(6679705-6679800)
chr5 (225-279)||(31009034-31009088)
chr5 (185-281)||(15409608-15409703)
chr5 (227-277)||(31132392-31132442)
chr5 (185-281)||(3921263-3921358)
chr5 (185-281)||(26720523-26720618)
chr5 (185-281)||(26990272-26990367)
chr5 (179-281)||(36875610-36875702)
chr5 (233-270)||(41470425-41470462)
chr5 (185-281)||(2252166-2252261)
chr5 (225-281)||(21370050-21370106)
chr5 (209-280)||(38296233-38296304)
chr5 (227-281)||(39557515-39557569)
chr5 (185-281)||(39688895-39688990)
[»] scaffold0237 (1 HSPs)
scaffold0237 (178-281)||(4029-4131)
[»] scaffold0321 (1 HSPs)
scaffold0321 (185-281)||(10107-10202)
[»] scaffold1268 (1 HSPs)
scaffold1268 (178-281)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (178-281)||(927-1029)
[»] scaffold0316 (1 HSPs)
scaffold0316 (227-281)||(17102-17156)
[»] scaffold0110 (1 HSPs)
scaffold0110 (229-281)||(8861-8913)
[»] scaffold0018 (1 HSPs)
scaffold0018 (220-281)||(152539-152600)


Alignment Details
Target: chr2 (Bit Score: 161; Significance: 7e-86; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 11541450 - 11541282
Alignment:
Q  1 ttagcctttttaacaagtggttcagtcaatgagttaaagtaaaaatgtttaccttagtcacacgaataacatgtgggttaaaatttcacataaaatagaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11541450 ttagcctttttaataagtggttcagtcaatgagttaaagtaaaaatgtttaccttagtcacacgaataacatgtgggttaaaatttcacagaaaatagaa 11541351  T
Q  101 ttataatgaaagatagttcaaggaatatagattgaccccatatttcattctatatccccctttttccta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11541350 ttataatgaaagatagttcaaggaatatagattgaccccatatttcattctatatccccctttttccta 11541282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 10249483 - 10249380
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10249483 agagtaatgatacatagacacccttaggtga-caatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  277 tctct 281  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtga-caatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 32505651  T
Q  277 tct 279  Q
    |||    
T  32505650 tct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 9058479 - 9058582
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9058479 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  277 tctct 281  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 28863462 - 28863557
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28863462 gatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 33436201 - 33436098
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33436201 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactt 33436103  T
Q  277 tctct 281  Q
    |||||    
T  33436102 tctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| |||| ||||| | | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtga-caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13438441  T
Q  278 ctct 281  Q
    ||||    
T  13438442 ctct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  40701478 gagtaatgatacatagacacccttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 40701576  T
Q  278 ctct 281  Q
    ||||    
T  40701577 ctct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| ||||||||||||||||||  || |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 7465738  T
Q  277 tctct 281  Q
    |||||    
T  7465737 tctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||||||||  || |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 17473118  T
Q  278 ctct 281  Q
    ||||    
T  17473119 ctct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||||||| |||||| ||| ||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtg-gcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacacttt 27864802  T
Q  278 ctct 281  Q
    ||||    
T  27864803 ctct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtg-gcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacacttt 28381657  T
Q  278 ctct 281  Q
    ||||    
T  28381656 ctct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| ||||||||||||| |||| ||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtg-gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 5574491  T
Q  277 tctct 281  Q
    |||||    
T  5574490 tctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 20700814 - 20700917
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||||||| |||||| ||| |||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20700814 agagtaatgatacatagacatccttatgtg-gcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 20700912  T
Q  277 tctct 281  Q
    |||||    
T  20700913 tctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 30915462 - 30915565
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| |||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  30915462 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  277 tctct 281  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| |||| ||||| ||||||||| | |||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtga-caatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T
Q  278 ct 279  Q
    ||    
T  4060784 ct 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 19930913 - 19930818
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| ||| ||||| | |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19930913 gatacatagacacccttaggtg-gcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 40613995 - 40613900
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  40613995 gatacatagacatccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 38882914 - 38882809
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtgga---ccccgcacaagcaca 273  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| | ||||||||||||||||||||||||||||||||   |||||||||||| ||    
T  38882914 agagtaatgatacatagacacccttaggtg-gcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgca 38882817  T
Q  274 ctttctct 281  Q
    ||||||||    
T  38882816 ctttctct 38882809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 38273213 - 38273140
Alignment:
Q  208 gcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||| ||| ||| | ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  38273213 gcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 38732361 - 38732456
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| |||||||||||||| ||||| | |  |||| |||||||||||||||||||| || ||||  ||||||||||||||| |||||||||||    
T  38732361 gatacataaacacccttatgtga-caatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 42257200 - 42257295
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| | ||| ||| |||||| | | ||||| ||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  42257200 gatacatagacatctttaggtg-gcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 2533131 - 2533221
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||||||||| ||||| ||| |||||| | | ||||| ||| ||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  2533131 gatacatagacatccttaagtg-gcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 26891597 - 26891502
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||| |||||||| ||| |||||| |||  | || |||||||||||||||||||| || |||||||||||| || ||||||||| |||||||    
T  26891597 gatacatagccacccttaggtg-gcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttctct 26891502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| |||||  || |||||| ||||||||| ||||||| |||||||||||||||   || ||||||   ||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatg-gcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactt 33436308  T
Q  277 tctct 281  Q
    |||||    
T  33436309 tctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 3737989 - 3738043
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||| |||||    
T  3737989 acccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 43490128 - 43490219
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||||| ||||||||| |||| ||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  43490128 gatacataaacacccttaggtga-caatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 36168883 - 36168938
Alignment:
Q  226 cccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||| |||||||| | ||| ||||||||||||||||| |||||||||    
T  36168883 cccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 2997546 - 2997485
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  2997546 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 13365382 - 13365455
Alignment:
Q  208 gcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||  |||| |||||||||||||||||||| ||   ||  ||||||||||||||| |||||||||||    
T  13365382 gcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 17820063 - 17820002
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||||||||||||||||||| || || ||||||||||| ||||| |||| |||||||    
T  17820063 ttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttctct 17820002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 3440025 - 3440081
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||| ||| ||  | |||||||||||||||||||||| |||||||    
T  3440025 acccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctct 3440081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 45097794 - 45097733
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| ||||| |||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  45097794 ttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  229 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||| || ||||  ||||||||||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  229 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||| ||||| |||| ||||| ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtga-caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  278 ctct 281  Q
    ||||    
T  38267139 ctct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 7389388 - 7389491
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7389388 agagtaatgatacatagacacccttaggtg-gcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  277 tctct 281  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| ||||| ||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 19329940  T
Q  278 ctct 281  Q
    ||||    
T  19329941 ctct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 3784002 - 3784097
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3784002 gatacatagacacccttaggtg-gcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 8080484 - 8080381
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8080484 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  277 tctct 281  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 19436288 - 19436185
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  19436288 agagtaatgatacatagacatccttaggtga-caatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  277 tctct 281  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| | | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtg-gcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 36361916  T
Q  277 tctct 281  Q
    |||||    
T  36361915 tctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||||||||  || |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  4999614 gagtaatgatacatagacacccttagatg-gcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacacttt 4999516  T
Q  278 ctct 281  Q
    ||||    
T  4999515 ctct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtg-gcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactt 3434659  T
Q  277 tctct 281  Q
    |||||    
T  3434660 tctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| | |||| | | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtg-gtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 36362123  T
Q  277 tctct 281  Q
    |||||    
T  36362124 tctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 38837216 - 38837319
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38837216 agagtaatgatacatagacacccttaggtg-gcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38837314  T
Q  277 tctct 281  Q
    |||||    
T  38837315 tctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 40957706 - 40957809
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| ||||||||||||| |||| ||| |||||| ||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  40957706 agagtaatgatacatagacactcttaggtg-gcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactt 40957804  T
Q  277 tctct 281  Q
    |||||    
T  40957805 tctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||| ||||||||||||| ||| |||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  35137533 gagtaatgataaatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacacttt 35137631  T
Q  278 ctct 281  Q
    ||||    
T  35137632 ctct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 3694374 - 3694469
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| ||| ||||||||| |||| ||||| ||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  3694374 gatatatacacacccttaggtga-caatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 32951545 - 32951491
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32951545 ccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 8238242 - 8238315
Alignment:
Q  208 gcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||| ||| ||||| |||||||||||||||||||| |||||||  ||||||||||||||| |||||||||||    
T  8238242 gcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 21234408 - 21234503
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| |||| ||||| ||| ||||| || ||||||||||| |||||||||| ||| || |||||||||||||||| |||||||    
T  21234408 gatacatagacatccttaggtga-caatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttctct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 35522883 - 35522978
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||| | ||||||||||||||||||||||| | ||  |||| ||||||||||||||||||||||    
T  35522883 gatacatagacatccttaagtg-gcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 18207187 - 18207281
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| |||| |||| ||||| |||||||||| |||||| | |||||| ||||| ||||||||||||||||||    
T  18207187 gatacatagacaaccttaggtg-gcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttctct 18207281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 38044204 - 38044299
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| | |||||||||||||||||| |||| ||  ||||||||||||||| |||||||||||    
T  38044204 gatacataaacacccttaggtg-gcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 39256016 - 39255922
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| |||  |||||||||| ||||||||||||||||| | ||||||||| || |||||| |||||||||||    
T  39256016 gatacatagacaaccttaggtg-gcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttctct 39255922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 273
Target Start/End: Complemental strand, 46374895 - 46374808
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 273  Q
    |||||||||||| ||||| ||| |||| | ||| ||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  46374895 gatacatagacatccttaggtg-gcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 11044238 - 11044280
Alignment:
Q  239 ctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  11044238 ctgacacgtagtcacgtggaccccgcacaagtacactttctct 11044280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 36208214 - 36208275
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| ||||||||||||| |||||| || ||||||||||||| ||||||||||| |||||||    
T  36208214 ttgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 22343368 - 22343463
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| ||   ||  ||||||||||||||| |||||||||||    
T  22343368 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 41915748 - 41915843
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| ||| |||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  41915748 gatacataaacacccttaggtg-gcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 16374876 - 16374822
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||||| ||||||    
T  16374876 ccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 27744369 - 27744307
Alignment:
Q  219 tttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||||||||||| || | |||||||| ||| || ||||||| |||||||    
T  27744369 tttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 10343664 - 10343597
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacac 245  Q
    ||||||| |||||||||||||||||| ||| | |||| || | |||| |||||||||||||||||||||    
T  10343664 agagtaatgatacatagacacccttaggtg-gaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 26296651 - 26296746
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| |||| ||||||||| ||| | | ||||| |||||||||| |||| | ||  |||||||||||||||| || |||||||    
T  26296651 gatacatagacatccttaggtga-caatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 2318307 - 2318241
Alignment:
Q  215 accttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||| |||||||||||||||||||  || |||||||||||||  || ||||| |||||||||    
T  2318307 acctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctct 2318241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 279
Target Start/End: Original strand, 7727913 - 7728006
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    |||||||| ||||||||| ||| | |||| |||| |||| |  |||| |||||||||||| || ||||  ||||||||||||||| |||||||||    
T  7727913 gatacataaacacccttaggtg-gtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 46033872 - 46033799
Alignment:
Q  208 gcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||| ||| ||| | ||||||| ||||||||||||||| ||||| || || ||||||||||| | |||||||    
T  46033872 gcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 40846206 - 40846111
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| ||||| ||| |||||| |||  |||| | |||||||||||||| ||| ||||| |  ||||||||||||||  |||||||||||    
T  40846206 gatacataaacatccttaggtg-gcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttctct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 14547921 - 14548024
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14547921 agagtaaagatacatagacacccttaggtg-gcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  277 tctct 281  Q
    |||||    
T  14548020 tctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  504221 gagtaatgatacatagacacccttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacatt 504123  T
Q  278 ctct 281  Q
    ||||    
T  504122 ctct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtga-caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 12831145  T
Q  278 ctct 281  Q
    ||||    
T  12831146 ctct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtg-gcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 23122599  T
Q  278 ctct 281  Q
    ||||    
T  23122598 ctct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||| |||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 15197431  T
Q  278 ctct 281  Q
    ||||    
T  15197432 ctct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 10284724 - 10284629
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| |||| ||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10284724 gatacatagacacccttaagtga-caatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| | |||| ||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtg-gtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 34012298  T
Q  278 ctct 281  Q
    ||||    
T  34012297 ctct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 40424043 - 40423941
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||| ||||||| ||| |||||| ||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtg-gcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  278 ctct 281  Q
    ||||    
T  40423944 ctct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| | ||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 37038576  T
Q  277 tct 279  Q
    |||    
T  37038577 tct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| | |||| ||| ||||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtg-gtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacacttt 1179942  T
Q  278 ctct 281  Q
    ||||    
T  1179941 ctct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 5957831 - 5957932
Alignment:
Q  179 agtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 278  Q
    ||||| ||||||||||||  |||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  5957831 agtaatgatacatagacattcttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttc 5957929  T
Q  279 tct 281  Q
    |||    
T  5957930 tct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 44507188 - 44507085
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| | |||| ||  ||| | ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44507188 agagtaatgatacatagacacccttaggtg-gtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactt 44507090  T
Q  277 tctct 281  Q
    |||||    
T  44507089 tctct 44507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 8841492 - 8841430
Alignment:
Q  219 tttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8841492 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 15048274 - 15048180
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  15048274 gatacatagacatccttaggtg-gcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 9122231 - 9122287
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  9122231 acccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 10621180 - 10621085
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| | |||| ||| ||||| ||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||    
T  10621180 gatacatagacatccttaggtg-gtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctct 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 43414674 - 43414579
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| |||||  || |||| | ||| ||||| |||||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||    
T  43414674 gatacatagacatccttagatg-gcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 16383384 - 16383479
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  16383384 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 4854964 - 4854861
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||| ||| |||||| ||| ||| | ||| ||| |||||||||| | || | ||| ||||||| ||||||||||||||    
T  4854964 agagtaatgatacatagacatccttaggtg-gcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  277 tctct 281  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 16056494 - 16056399
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| |||||||||| ||||| | |  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  16056494 gatacataaacatccttatgtga-caatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 17443832 - 17443927
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| |||| ||||| || | || | || ||||||||||||||||| ||||||| ||||||||| |||||  |||||||||||    
T  17443832 gatacatagacaaccttaggtga-caatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctct 17443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 34307223 - 34307318
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  || |||||||||||| |||||||||||    
T  34307223 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 42221561 - 42221617
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||||||||| |||  ||||||||  |||||||||||||||||    
T  42221561 acccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 15258981 - 15258927
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||    
T  15258981 ccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 24307886 - 24307791
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| | |  |||| |||||||||||||||||| | || | ||  ||||||||||||||| |||||||||||    
T  24307886 gatacataaacacccttaggtg-gcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 14055685 - 14055609
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggacccc 262  Q
    ||||||| |||||||||| |||| ||||| ||   |||| | |||||||||||||| ||| |||||||||||||||||    
T  14055685 gatacattgacacccttaggtga-caatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30479567 - 30479472
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| ||| ||||| | ||||| |||||||||||| || |  |  |||||| |||||||| |||||||||||    
T  30479567 gatacataaacacccttaggtg-gcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttctct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 38229474 - 38229530
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||||| || ||||||||||  | | ||||||||| |||||||    
T  38229474 acccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctct 38229530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 48183150 - 48183047
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48183150 agagtaatgatacatagacacccttacgtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  277 tctct 281  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtg-gcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 41236445  T
Q  278 ctct 281  Q
    ||||    
T  41236446 ctct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 480548 - 480445
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  480548 agagtaatgatacatagacacccttaggtga-caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 480450  T
Q  277 tctct 281  Q
    |||||    
T  480449 tctct 480445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 50052529 - 50052426
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50052529 agagtaatgatacatagacatccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 50052431  T
Q  277 tctct 281  Q
    |||||    
T  50052430 tctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  278 ctct 281  Q
    ||||    
T  11511463 ctct 11511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 29234346 - 29234243
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| ||||||||||||||||||  || |||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatg-gcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 29234248  T
Q  277 tctct 281  Q
    |||||    
T  29234247 tctct 29234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  278 ctct 281  Q
    ||||    
T  6034143 ctct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtga-caatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 29239885 - 29239988
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  29239885 agagtaatgatacatagacacccttaggtg-gcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactt 29239983  T
Q  277 tctct 281  Q
    |||||    
T  29239984 tctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 42044468 - 42044365
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| | | ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42044468 agagtaatgatacatagacacccttaggtg-gcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 42044370  T
Q  277 tctct 281  Q
    |||||    
T  42044369 tctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||| ||| ||| |||||| ||  ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtg-gcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacacttt 3481752  T
Q  278 ctct 281  Q
    ||||    
T  3481753 ctct 3481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 23608234 - 23608337
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||| |||||||||||||  ||| ||||| ||| ||||| |||||||||||||||||||||||||||||||| || || |||||||||||||    
T  23608234 agagtaatgatatatagacacccttagatga-caatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  277 tctct 281  Q
    |||||    
T  23608333 tctct 23608337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 24995208 - 24995105
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||| || ||||||||||  || |||||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||    
T  24995208 agagtaatgatatatggacacccttagatg-gcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  277 tctct 281  Q
    |||||    
T  24995109 tctct 24995105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 31910199 - 31910294
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| |||| ||||| ||  ||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  31910199 gatacatagacatccttaggtga-caatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctct 31910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 41823928 - 41823984
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41823928 acccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| | ||| ||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||||||  |||||||||||| ||||    
T  50526271 gagtaatgatacatagacatctttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgcttt 50526173  T
Q  278 ct 279  Q
    ||    
T  50526172 ct 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 29977931 - 29977987
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  29977931 acccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctct 29977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 53352658 - 53352564
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| |||  ||||| |   ||| | ||| |||||||||||||||||||||| | |||||||||||||||||| |||||||||    
T  53352658 gatacatagacacccttaggtg--caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctct 53352564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 28480360 - 28480267
Alignment:
Q  186 atacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 280  Q
    ||||||||||| ||||| |||| ||||| || | || | || ||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  28480360 atacatagacaaccttaggtga-caatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 28481235 - 28481142
Alignment:
Q  186 atacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 280  Q
    ||||||||||| ||||| |||| ||||| || | || | || ||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  28481235 atacatagacaaccttaggtga-caatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 28482110 - 28482017
Alignment:
Q  186 atacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 280  Q
    ||||||||||| ||||| |||| ||||| || | || | || ||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  28482110 atacatagacaaccttaggtga-caatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 19670809 - 19670714
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| || ||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  19670809 gatacataaacacccttaggtg-gcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 40574786 - 40574881
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| | |||| ||| ||||| ||||||||||||||||||||||  |  || |||| |||| |||||||||||||||||    
T  40574786 gatacatagacatccttaggtg-gtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttctct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 48647780 - 48647724
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||| |||||||| |||||| ||||||||||| ||||||||||||| |||||||    
T  48647780 acccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctct 48647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 17983802 - 17983741
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  17983802 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 50813951 - 50813890
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||||||||||||||||||| || ||||  || |||||||||||| |||||||||||    
T  50813951 ttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctct 50813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 47986215 - 47986310
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| | |  |||| | |||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  47986215 gatacataaacacccttaggtg-gcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 55475198 - 55475293
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| ||||| ||| |||||| ||| ||||| |||||||||||||||||||| || | ||  ||||||| ||| ||| |||||||||||    
T  55475198 gatacataaacatccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 55079807 - 55079711
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtgga-ccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||| |||| ||||| |||||||||||||| || | ||  |||| |||| |||||| |||||||||||    
T  55079807 gatacataaacacccttaggtg-gcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacactttctct 55079711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 32766965 - 32767060
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| |||| |||| ||| |||||| |||  |||| ||||| |||||||||||||| || | ||  ||||||| ||||||| |||||||||||    
T  32766965 gatacataaacactcttaggtg-gcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 32869678 - 32869780
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32869776  T
Q  278 ctct 281  Q
    ||||    
T  32869777 ctct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| | ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtg-gcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacacttt 17598652  T
Q  278 ctct 281  Q
    ||||    
T  17598653 ctct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 22880751 - 22880656
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22880751 gatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 6209566 - 6209463
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||  ||||| || |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  6209566 agagtaatgatacatagacacccttaggtg-gcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactt 6209468  T
Q  277 tctct 281  Q
    |||||    
T  6209467 tctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 11427615 - 11427720
Alignment:
Q  177 agagtaacgatacatagacaccct--tatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 274  Q
    ||||||| ||||||||||||||||  || ||| |||||| | | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtg-gcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 11427713  T
Q  275 tttctct 281  Q
    |||||||    
T  11427714 tttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 31976255 - 31976350
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||||||| ||| | ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  31976255 gatacatagacatccttaggtg-gcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||| |||  || |||||| ||||||| | |||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  29857827 gagtaatgatacatagacacctttagatg-gcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 29857925  T
Q  278 ctct 281  Q
    ||||    
T  29857926 ctct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 23128220 - 23128125
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| ||||||||| ||||||||  |||| | | ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  23128220 gatatatagacacctttatgtgat-aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 31109488 - 31109398
Alignment:
Q  190 atagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||| ||| |||||| ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  31109488 atagacacccttaggtg-gcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctct 31109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 15832576 - 15832679
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||| ||| |||| ||||| | | ||||| |||||||||||||| ||||||||||||||||||| || ||||||  ||| ||    
T  15832576 agagtaatgatacatagacacctttaggtga-caataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattt 15832674  T
Q  277 tctct 281  Q
    |||||    
T  15832675 tctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 15508117 - 15508022
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  15508117 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 15990135 - 15990040
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  15990135 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30341453 - 30341358
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  30341453 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 946377 - 946478
Alignment:
Q  179 agtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 278  Q
    |||||||||||||||||| ||||| ||||  |||| ||| ||||| ||| || |||||||||||||| |||||||||  | ||||| | |||||||||||    
T  946377 agtaacgatacatagacatccttaggtgat-aatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttc 946475  T
Q  279 tct 281  Q
    |||    
T  946476 tct 946478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 28536545 - 28536486
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| ||||||||||||||||||||||  |||| ||||||||| ||||||||||||||||||    
T  28536545 ttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 31110852 - 31110759
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||||| || ||||  |||||||||||||||  ||| ||||||| |||||||||||||||||||    
T  31110852 gatacatagacatccttaggtg-gcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacactttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 4231594 - 4231650
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||| |||||||||||    
T  4231594 acccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||| ||||||| ||||| ||| |||||| |||  |||| ||||||| |||||||||||| ||  ||| ||||||| | ||||| ||||||||    
T  31953130 gagtaatgatagatagacatccttaggtg-gcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacacttt 31953032  T
Q  278 ctct 281  Q
    ||||    
T  31953031 ctct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 12732481 - 12732584
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| ||||||||||||  |||| ||| ||||||||    |||| ||||||||||||||||||||||| |  | ||||| ||| || ||||||| ||    
T  12732481 agagtaatgatacatagacattcttaagtg-gcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattt 12732579  T
Q  277 tctct 281  Q
    |||||    
T  12732580 tctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 30870068 - 30870116
Alignment:
Q  233 aaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| || ||||| ||||||||||||||||||| |||||||    
T  30870068 aaaaatctaacatgtggtcacatggaccccgcacaagcacattttctct 30870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 53982109  T
Q  278 ctct 281  Q
    ||||    
T  53982110 ctct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 54868996 - 54868893
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  54868996 agagtaatgatacatagacacccttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  277 tctct 281  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||  ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  278 ctct 281  Q
    ||||    
T  33644299 ctct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||| ||| ||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtg-gcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 17470502  T
Q  277 tctct 281  Q
    |||||    
T  17470503 tctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 49607413 - 49607516
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  49607413 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 49607511  T
Q  277 tctct 281  Q
    |||||    
T  49607512 tctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 52629307 - 52629402
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52629307 gatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 27714992 - 27714889
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||| ||| ||| | |||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27714992 agagtaatgatacatagacacctttaggtg-gtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  277 tctct 281  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 8076393 - 8076495
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||| ||||||||| ||| ||| || ||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtg-gcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 8076491  T
Q  278 ctct 281  Q
    ||||    
T  8076492 ctct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 31456690 - 31456791
Alignment:
Q  179 agtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 278  Q
    ||||| ||||||||||||||| || | | |||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 31456788  T
Q  279 tct 281  Q
    |||    
T  31456789 tct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 11095454 - 11095353
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||  |||||||| || |||||||    
T  11095454 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactt 11095358  T
Q  277 tctct 281  Q
    |||||    
T  11095357 tctct 11095353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 26141625 - 26141530
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||| | ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  26141625 gatacatagacatccttaggtg-gcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 33118944 - 33118849
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| |||| ||||| ||| ||||| |||||||||||||| ||||||||||||||||||| ||| || || ||||||||||||    
T  33118944 gatacatagacacccttaggtga-caatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 48587184 - 48587089
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||| ||||||| ||| |||||| ||| ||||| ||| ||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  48587184 gatacatagatacccttaggtg-gcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 30801826 - 30801731
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||||  |||| ||| |||||||||||||||||||| ||||| |||||||  |||||||| |||||||||| |||||||    
T  30801826 gatacatagacacccttaggtgat-aatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctct 30801731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| |||||  || |||||| ||||||||| ||||||| ||||||||| ||||| | ||||||||||| | |||| |||||||    
T  24700055 agagtaatgatacatagacatccttagttg-gcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactt 24699957  T
Q  277 tctct 281  Q
    |||||    
T  24699956 tctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 26754706 - 26754797
Alignment:
Q  189 catagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||| ||| |||||| ||| || || | |||||||||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  26754706 catagacacccttaggtg-gcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||||||| |||||| ||| ||||| ||||||| |||||| |||||||| |||| |||||||   |||||||||||||    
T  35536625 agagtaatgatacatagacatccttatgtg-gcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacactt 35536723  T
Q  277 tctct 281  Q
     ||||    
T  35536724 cctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 36707525 - 36707439
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgc 264  Q
    ||||||| |||||||||| ||||||| |||| ||||| ||| ||||| | |||||||||||||||||||||||| ||||||| |||||    
T  36707525 agagtaatgatacatagatacccttaggtga-caatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 11348015 - 11347920
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| |||| ||||| | | ||||| | ||||||||||||||||||||| | ||| ||||||| ||| |||||||||||||||    
T  11348015 gatacatagacatccttaggtga-caatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 20764969 - 20764913
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||    
T  20764969 acccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 41189857 - 41189762
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| ||||| ||| |||||| | | ||||| ||||||| |||||| |||||||| | ||| |||||||||||||||||||||||||||    
T  41189857 gatacatatacatccttaggtg-gcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 51419414 - 51419358
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||    
T  51419414 acccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| ||||| ||| |||||| |||  |||| ||||||| |||||||||||| ||  ||| ||||||| | ||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtg-gcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacacttt 14623841  T
Q  278 ctct 281  Q
    ||||    
T  14623840 ctct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||||||| |||||| | | ||||| ||||||| |||||| ||||||||  ||| |||||||   |||||||||||||    
T  8956761 agagtaatgatacatagacatccttatgtg-gcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacactt 8956859  T
Q  277 tctct 281  Q
     ||||    
T  8956860 cctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 9563053 - 9563101
Alignment:
Q  233 aaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||||||||||| || |||||| ||||||||||||    
T  9563053 aaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 47531872 - 47531967
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| |||||  || |||||| ||||||| | | |||||||| |||||||||||| | ||  || ||||||||||||||||||||||||    
T  47531872 gatacatagacatccttagatg-gcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 13898154 - 13898053
Alignment:
Q  179 agtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 278  Q
    ||||| |||| ||| ||| ||||| ||| |||||| |||  |||| ||||||| |||||||||||||||  ||| ||||||| | |||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtg-gcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttc 13898056  T
Q  279 tct 281  Q
    |||    
T  13898055 tct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 11907420 - 11907473
Alignment:
Q  228 cacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||| || ||||  ||||||||||||||||||| |||||||    
T  11907420 cacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 36331388 - 36331327
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  36331388 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 48375754 - 48375704
Alignment:
Q  231 acaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||  || ||||| ||||||||||||||||||| |||||||    
T  48375754 acaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctct 48375704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 35093584 - 35093687
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||| |||||||||||||| | ||| |||| ||||| | | ||||| | |||| ||||||||||||| || |||| ||| || ||  ||||||||||||    
T  35093584 agagttacgatacatagacaactttaggtga-caatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  277 tctct 281  Q
    |||||    
T  35093683 tctct 35093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 2581914 - 2582015
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2581914 agagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 2582012  T
Q  277 tct 279  Q
    |||    
T  2582013 tct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9474976 gagtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  278 ctct 281  Q
    ||||    
T  9474877 ctct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| ||||| ||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 27564737  T
Q  278 ctct 281  Q
    ||||    
T  27564736 ctct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 38632422 - 38632323
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38632422 agagtaatgatacatagacacccttaggtg-gcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 44548469 - 44548374
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| | ||| ||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44548469 gatacatagacatctttaggtg-gcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 50630457 - 50630560
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||| ||||||| ||| |||||| | | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtg-gcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 50630555  T
Q  277 tctct 281  Q
    |||||    
T  50630556 tctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 3000319 - 3000421
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||| ||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 3000417  T
Q  278 ctct 281  Q
    ||||    
T  3000418 ctct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtg-gcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 8346489 - 8346386
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| ||||||||| |||| ||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8346489 agagtaatgatacatagtcacctttaggtg-gcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactt 8346391  T
Q  277 tctct 281  Q
    |||||    
T  8346390 tctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 38595153 - 38595256
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||| ||||| ||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38595153 agagtaatgatacataaacacctttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 38595251  T
Q  277 tctct 281  Q
    |||||    
T  38595252 tctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| | |||| ||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtg-gtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacacttt 47452322  T
Q  278 ctct 281  Q
    ||||    
T  47452321 ctct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| | ||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 51898686  T
Q  277 tct 279  Q
    |||    
T  51898685 tct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 32813254 - 32813349
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  32813254 gatacatagacatccttaggtg-gcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 41758804 - 41758907
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||| |||  || |||||| ||| ||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  41758804 agagtaatgatacatagacaccattaaatg-gcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactt 41758902  T
Q  277 tctct 281  Q
    |||||    
T  41758903 tctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||  |||| | || ||||| | | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggaga-caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacacttt 43230  T
Q  278 ctct 281  Q
    ||||    
T  43231 ctct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 5959093 - 5958998
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||| |||| |||||||||||||||||||| || ||||  ||||||||||||||| |||||||||||    
T  5959093 gatacataaacacccttaagtg-gcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 13414791 - 13414863
Alignment:
Q  209 caatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctct 13414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 26274439 - 26274530
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||||||||||||||||||| |||||| | | ||||| | ||||| ||||||||||||| |||||||||||| || ||||||| |||||||    
T  26274439 gatacatagacacccttatgtg-gcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 278
Target Start/End: Original strand, 37649198 - 37649297
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| | ||| ||| |||||| ||  ||||| ||||||||||||||||||||||| |||||||| |  |||||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtg-gcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacacttt 37649296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 44453986 - 44454077
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||||||||||| ||| ||| |||||| | || ||||||||||||||||||||||||| || || ||||||| ||| ||||||||||||||    
T  44453986 gatacatagacacctttaagtg-gcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 11152430 - 11152378
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  11152430 ccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 49811620 - 49811525
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| ||||||| ||||| |||| ||||| ||| ||||| | ||||||||||||||||||||||| ||  | ||| |||||||||||||||||||||    
T  49811620 gatagatagacatccttaggtga-caatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 50591093 - 50590998
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  50591093 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 45044631 - 45044558
Alignment:
Q  208 gcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||| ||| ||||| ||||| |||||||||||||| |||| ||| |||||||||||||| |||| |||||||    
T  45044631 gcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctct 45044558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 23597192 - 23597093
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| | ||| ||| |||||| ||  ||||||||||||| ||||||||||||||| | ||||| ||||  |||||| |||||||    
T  23597192 agagtaatgatacatagacatcattaggtg-gcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacactt 23597094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 26440780 - 26440836
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    ||||||||||||||||||||||| | ||| |||| |||||| |||||||||||||||    
T  26440780 acccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 48489348 - 48489400
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    |||||||||||||||||| || |||||||||| |||||||||||||| |||||    
T  48489348 ccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 3302587 - 3302533
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    |||||||||||||||||||||||| |||  ||||||||  |||||||||||||||    
T  3302587 acccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 44334222 - 44334175
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 274  Q
    ||||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  44334222 ccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 6260916 - 6260970
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    ||||||| |||||||| ||| || ||||||||||||||||| ||||||| |||||    
T  6260916 acccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttct 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 37926509 - 37926436
Alignment:
Q  208 gcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||| | ||||| | ||||||| ||||||||||||||| | ||| |||| |||| ||||| |||||||||||    
T  37926509 gcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 41608586 - 41608491
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| ||||| ||| |||||| |||  |||| || ||||||||||||||||| || | ||  ||||||||| ||||| |||||||||||    
T  41608586 gatacataaacatccttaggtg-gcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttctct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 13811651 - 13811754
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| ||| |||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13811651 agagtaaagatacatagacacccttaggtg-gcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13811749  T
Q  277 tctct 281  Q
    |||||    
T  13811750 tctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 18520977 - 18520882
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520977 gatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 36733043 - 36732940
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||||||||| || ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36733043 agagtaatgatacatagacacccttaggt-agcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  277 tctct 281  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  177 agagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 276  Q
    ||||||| |||||||||||| ||||| ||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 2740371  T
Q  277 tctct 281  Q
    |||||    
T  2740372 tctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  35785199 gagtaatgatacatagacacccttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacacttt 35785297  T
Q  278 ctct 281  Q
    ||||    
T  35785298 ctct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| |||||| ||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtg-gcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 40145505  T
Q  278 ctct 281  Q
    ||||    
T  40145506 ctct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||||||| ||| | |||| ||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtg-gtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 33149640  T
Q  278 ctct 281  Q
    ||||    
T  33149639 ctct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||| |||| ||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtg-gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 14831912  T
Q  278 ct 279  Q
    ||    
T  14831913 ct 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 42414402 - 42414304
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| ||||||||||||||  || ||| |||||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 28177782 - 28177877
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  28177782 gatacatagacatccttaggtg-gcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 35943985 - 35943890
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| ||| |||||| | | ||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  35943985 gatacatagacacccttaggtg-gcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 6679705 - 6679800
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| | ||| ||| |||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||    
T  6679705 gatacatagacatctttaggtg-gcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 31009034 - 31009088
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 279  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31009034 acccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 15409703 - 15409608
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| |||| ||||| |   ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  15409703 gatacatagacatccttaggtga-caatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 31132392 - 31132442
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatacttt 31132442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 3921358 - 3921263
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  3921358 gatacataaacacccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 26720523 - 26720618
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||| | ||| ||| ||||||||||||||| | ||| |||| ||||||||||||||||||||||    
T  26720523 gatacatagacatccttaggtg-gcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctct 26720618  T

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Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 26990272 - 26990367
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||| ||||| ||| |||||| ||| ||| | ||| ||| ||||||||||||||| | ||| |||| ||||||||||||||||||||||    
T  26990272 gatacatagacatccttaggtg-gcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctct 26990367  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 36875702 - 36875610
Alignment:
Q  179 agtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 278  Q
    ||||| |||||||||||||||||| ||| |||||| ||| ||||| |||||||||||||         |||||||||||| |||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtg-gcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacactttc 36875613  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 41470462 - 41470425
Alignment:
Q  233 aaaaatctgacacgtagtcacgtggaccccgcacaagc 270  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41470462 aaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 2252261 - 2252166
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||| ||||| ||| |||||| |||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  2252261 gatacataaacatccttaggtg-gcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2252166  T

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Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 21370050 - 21370106
Alignment:
Q  225 acccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||| ||||||||||||| || |||||||||||||||||||| |||| |||||||    
T  21370050 acccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctct 21370106  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 38296233 - 38296304
Alignment:
Q  209 caatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 280  Q
    ||||| |||| || ||||||||||||||||| |||||||||  ||||||| ||  |||||||||||||||||    
T  38296233 caatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttctc 38296304  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 39557569 - 39557515
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||||||  |||| ||||||||  |||| ||||||||||||    
T  39557569 ccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 39688990 - 39688895
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||| ||||||||| ||| |||||| | |  |||| |||||||||||||||||| | || ||||  || |||||||| ||| |||||||||||    
T  39688990 gatacataaacacccttaagtg-gcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctct 39688895  T

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Target: scaffold0237 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 281
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||||| |||  || |||||| ||||||| | |||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  4029 gagtaatgatacatagacacctttagatg-gcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4127  T
Q  278 ctct 281  Q
    ||||    
T  4128 ctct 4131  T

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Target: scaffold0321 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 10202 - 10107
Alignment:
Q  185 gatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||| ||| ||| |||||| | | ||||| | ||||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  10202 gatacatagacacctttaggtg-gcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctct 10107  T

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Target: scaffold1268 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| | ||| ||| |||||| ||| ||| | | ||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtg-gcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T
Q  278 ctct 281  Q
    ||||    
T  930 ctct 927  T

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Target: scaffold1267 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  178 gagtaacgatacatagacacccttatgtgagcaatataccttttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 277  Q
    |||||| |||||||||||| | ||| ||| |||||| ||| ||| | | ||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtg-gcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T
Q  278 ctct 281  Q
    ||||    
T  930 ctct 927  T

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Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 17102 - 17156
Alignment:
Q  227 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  17102 ccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

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Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 8913 - 8861
Alignment:
Q  229 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||||||||| |||||| |||||||||||||||| |||||| ||| |||||||    
T  8913 acacaaaaatttgacacatagtcacgtggaccccacacaagtacattttctct 8861  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 152539 - 152600
Alignment:
Q  220 ttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 281  Q
    |||| |||||||||||||||||||| || ||||  |||| |||||||||  |||||||||||    
T  152539 ttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

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