View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3627_low_13 (Length: 229)

Name: NF3627_low_13
Description: NF3627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3627_low_13
NF3627_low_13
[»] chr5 (19 HSPs)
chr5 (18-210)||(30339455-30339647)
chr5 (18-210)||(30399046-30399238)
chr5 (41-210)||(30434803-30434972)
chr5 (19-210)||(30243303-30243494)
chr5 (40-209)||(4380640-4380809)
chr5 (25-210)||(30482385-30482570)
chr5 (41-214)||(29871163-29871336)
chr5 (39-210)||(30748624-30748795)
chr5 (41-210)||(30059338-30059507)
chr5 (38-210)||(29852280-29852452)
chr5 (40-210)||(30678120-30678293)
chr5 (39-214)||(30205487-30205662)
chr5 (40-162)||(30714386-30714508)
chr5 (43-208)||(29709864-29710029)
chr5 (93-203)||(30474363-30474473)
chr5 (61-211)||(30203130-30203280)
chr5 (56-205)||(30522599-30522748)
chr5 (56-205)||(30562939-30563088)
chr5 (117-205)||(30429934-30430022)
[»] chr4 (2 HSPs)
chr4 (18-206)||(20297533-20297721)
chr4 (117-205)||(52350946-52351034)
[»] chr7 (1 HSPs)
chr7 (41-209)||(26706314-26706482)
[»] chr1 (2 HSPs)
chr1 (41-161)||(7582681-7582801)
chr1 (43-205)||(7098401-7098563)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 30339455 - 30339647
Alignment:
Q  18 ggaggtactccatttactatgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgat 117  Q
    |||||||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | ||    
T  30339455 ggaggtactctacttacaacgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaacttgacaatctcctat 30339554  T
Q  118 tgccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  |||  | |||||||||||||||||||||||||||||||||||||||    
T  30339555 tgccctaaaattggactgccatgtcttccatctcttaaagacctctatgttgagggatgtaacaatgagttactgaggtcaatctctaccttc 30339647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 30399238 - 30399046
Alignment:
Q  18 ggaggtactccatttactatgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgat 117  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||  | |    
T  30399238 ggaggaactccatttactatgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctgagttgagaatcacagct 30399139  T
Q  118 tgccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||  |||    |||||||||||||||||||||||||||||||||||||||    
T  30399138 tgccctaaacttggagtgccatgtcttccatctcttaaatccctctatgtattgggatgtaacaatgagttactgaggtcaatctctaccttc 30399046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 30434972 - 30434803
Alignment:
Q  41 taccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||    | |||||||||||||||||||||||    
T  30434972 taccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctagtttggatatctggaaatgccctaaacttggactgccatg 30434873  T
Q  141 tcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||    
T  30434872 tcttccatctcttaaagacctcggtgtcgatggacgtaacaatgagttactgaggtcaatctctaccttc 30434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 30243303 - 30243494
Alignment:
Q  19 gaggtactccatttactatgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgatt 118  Q
    ||||||||||| |||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||    | |    
T  30243303 gaggtactccaattatcttgtctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctagtttggatatctggaaat 30243402  T
Q  119 gccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    | |||||||||||||||||||||||||||||||||||||    
T  30243403 gccctaaacttggactgccatgtcttccatctcttaaagacctctttgtatgggaatgtaacaatgagttactgaggtcaatctctaccttc 30243494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 40 - 209
Target Start/End: Complemental strand, 4380809 - 4380640
Alignment:
Q  40 ctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccat 139  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||   |||    ||||||||||||||||||||||||    
T  4380809 ctaccaaacataaaggggttattgaaagtggaaagaggggagttgtttccttgtctttctaacttggatatctagaattgccctaaacttggactgccat 4380710  T
Q  140 gtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctacctt 209  Q
    ||| ||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  4380709 gtcatccatctcttaaacacctcgttgttgagggatgtaacaatgagttactgaggtcaatctctacctt 4380640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 30482570 - 30482385
Alignment:
Q  25 ctccatttactatgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgcccta 124  Q
    |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  ||||    |||||| ||    
T  30482570 ctccatttacgatacctacgaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttcttacttggaaatctcatattgccata 30482471  T
Q  125 aacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||||||||| ||||||||||||| ||| ||||  |||  |||||||||||||||||||||||||||||||||||||||||    
T  30482470 aacttggactgccatctcttccatctcttgaaggcctctatgtggatggatgtaacaatgagttactgaggtcaatctctaccttc 30482385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 29871336 - 29871163
Alignment:
Q  41 taccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatg 140  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||   ||     | ||||||||| |||||||||||||    
T  29871336 taccaaacatagagggtttattgaaagttgaaagaggggagatgtttccttgtctttctagtttggatatttggaaatgccctaaaattggactgccatg 29871237  T
Q  141 tcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttctgtg 214  Q
    |||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||| ||||    
T  29871236 tcttccatctcttaaagacctcgttgccgatccatgtaacaatgagttactgaggtcaatctctaccttttgtg 29871163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 39 - 210
Target Start/End: Complemental strand, 30748795 - 30748624
Alignment:
Q  39 cctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgcca 138  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||   |||   ||||||||| ||||||||||||||    
T  30748795 cctaccaaacatagagggattattgaaagtggaaagaggggagatgtttccttgtctttctaagttggatatctgggattgccctgaacttggactgcca 30748696  T
Q  139 tgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||||||||||||  ||||  | |    | |||||||||||||||||||||||||||||||||||||    
T  30748695 tgtcttccatctcttaaatccctccatttatgggaatgtaacaatgagttactgaggtcaatctctaccttc 30748624  T

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Target: chr5; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 30059507 - 30059338
Alignment:
Q  41 taccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatg 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||   |||   || |||| ||||||||||||||||||    
T  30059507 taccaaacatagagggtttattgaaagtggaaagaggggagatgtttccttgtctttctaagttggatatctctgaatgccgtaaacttggactgccatg 30059408  T
Q  141 tcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||||||||||  ||||  |||    | |||||||||||||||||||||||||||||||||||||    
T  30059407 tcttccatctcttaaatccctcactgtatcggaatgtaacaatgagttactgaggtcaatctctaccttc 30059338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 29852452 - 29852280
Alignment:
Q  38 gcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgcc 137  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  ||||    |||||||| |||||||||||||    
T  29852452 gcctacgaaacatagaggggttattgaaagtggaaagagggaagatatttccttgtctttctaatttgaaaatctcatattgccctgaacttggactgcc 29852353  T
Q  138 atgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    ||||||||||||||| |||   |||  |||    |||||||||||||||||||||||||||||||||||||||    
T  29852352 atgtcttccatctctgaaactgctccatgtattgggatgtaacaatgagttactgaggtcaatctctaccttc 29852280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 40 - 210
Target Start/End: Original strand, 30678120 - 30678293
Alignment:
Q  40 ctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaa---cttggactgc 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   |||    |||||||||||   ||||||||||    
T  30678120 ctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaggttggatatctggaattgccctaaactgcttggactgc 30678219  T
Q  137 catgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttc 210  Q
    |||||||||||||||||||||| ||||   |    |||||||||||||||||||||||||||||||||||||||    
T  30678220 catgtcttccatctcttaaagaactcgagatatggggatgtaacaatgagttactgaggtcaatctctaccttc 30678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 214
Target Start/End: Complemental strand, 30205662 - 30205487
Alignment:
Q  39 cctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgcca 138  Q
    |||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||  |||  | |||  |  ||||||||||||||||||||||    
T  30205662 cctaccaaacttagaagggttattgaaagtggaaagaggtgagatgtttccttgtctttctcgtttaaccatctccttttgccctaaacttggactgcca 30205563  T
Q  139 tgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttctgtg 214  Q
    ||||||  |||||||||| |||| | |||    ||||||||||||||||| |||||||||||||||| ||| ||||    
T  30205562 tgtcttgtatctcttaaaaacctagatgtattgggatgtaacaatgagttgctgaggtcaatctctagcttttgtg 30205487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 30714386 - 30714508
Alignment:
Q  40 ctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatc-atcgattgccctaaacttggactgcca 138  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||| || | ||||||||||||||||||||||    
T  30714386 ctacgaaacatagtggggttattgaaagtggaaagaggggagatgtttccttctctttctaaattggtaatcgattg-ttgccctaaacttggactgcca 30714484  T
Q  139 tgtcttccatctcttaaagacctc 162  Q
    ||||||||||||||||||||||||    
T  30714485 tgtcttccatctcttaaagacctc 30714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 208
Target Start/End: Original strand, 29709864 - 29710029
Alignment:
Q  43 ccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatgtc 142  Q
    |||||| ||||||||||| |||| |||||||||| |||| |||||||||||| ||||| ||||  |||   |   | | ||||||||| |||| ||||||    
T  29709864 ccaaacttagaggggttagtgaatgtggaaagagaggaggtgtttccttgtccttctattttgaaaattgccctcttcactaaacttgaactgtcatgtc 29709963  T
Q  143 ttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctacct 208  Q
    |||| ||||||| |||||||| |||    ||||||||||||||||||||||| |||||||||||||    
T  29709964 ttccgtctcttatagacctcgatgtttcgggatgtaacaatgagttactgagatcaatctctacct 29710029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 30474473 - 30474363
Alignment:
Q  93 tctttctaatttgtcaatcatcgattgccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactg 192  Q
    ||||||||||||| | || || ||||||||||||||||   ||||||| |||||||| |||||||||||| ||||   ||||||||||||||||||||||    
T  30474473 tctttctaatttgaccattattgattgccctaaacttgtgttgccatgccttccatcccttaaagacctcattgtatttggatgtaacaatgagttactg 30474374  T
Q  193 aggtcaatctc 203  Q
    || ||||||||    
T  30474373 agatcaatctc 30474363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 211
Target Start/End: Complemental strand, 30203280 - 30203130
Alignment:
Q  61 ttgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatgtcttccatctcttaaagacc 160  Q
    |||||||||||||||| |||||||||||||||||||| | | |||   |||  |  || ||||||||||  |||| |||||||||||| | ||||| |||    
T  30203280 ttgaaagtggaaagagaggagatgtttccttgtctttttcaattggatatcgccttttaccctaaacttcaactgtcatgtcttccatatgttaaaaacc 30203181  T
Q  161 tcgttgtcaatggatgtaacaatgagttactgaggtcaatctctaccttct 211  Q
    |   ||| |||| |||||||||||||||||||||||| ||||||| |||||    
T  30203180 tttatgtaaatgaatgtaacaatgagttactgaggtcgatctctagcttct 30203130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 30522599 - 30522748
Alignment:
Q  56 ggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatgtcttccatctcttaa 155  Q
    |||| ||||||||||||| ||||||||| |||||  | |||||||| ||| | ||| | | |||||||||||||||  |||||   ||| ||||  ||||    
T  30522599 ggttgttgaaagtggaaacaggggagatttttccccgcctttctaagttggccatcgttggttgccctaaacttgggttgccacacctttcatcgtttaa 30522698  T
Q  156 agacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctcta 205  Q
    ||| ||| ||||  ||||||||||||||||||| |||  |||||||||||    
T  30522699 agaactcattgtagatggatgtaacaatgagttgctggagtcaatctcta 30522748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 30562939 - 30563088
Alignment:
Q  56 ggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatgtcttccatctcttaa 155  Q
    |||| ||||||||||||| ||||||||| |||||  | |||||||| ||| | ||| | | |||||||||||||||  |||||   ||| ||||  ||||    
T  30562939 ggttgttgaaagtggaaacaggggagatttttccccgcctttctaagttggccatcgttggttgccctaaacttgggttgccacacctttcatcgtttaa 30563038  T
Q  156 agacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctcta 205  Q
    ||| ||| ||||  ||||||||||||||||||| |||  |||||||||||    
T  30563039 agaactcattgtagatggatgtaacaatgagttgctggagtcaatctcta 30563088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 30430022 - 30429934
Alignment:
Q  117 ttgccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctcta 205  Q
    ||||| |||||||||  ||||||| ||| ||||| ||||||| ||| ||||  |||||||||||||||||||||||  |||||||||||    
T  30430022 ttgccttaaacttgggttgccatgcctttcatcttttaaagaactcattgtagatggatgtaacaatgagttactggagtcaatctcta 30429934  T

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Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 20297533 - 20297721
Alignment:
Q  18 ggaggtactccatttactatgcctaccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgat 117  Q
    |||||||||| | ||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||  | |     
T  20297533 ggaggtactcgacttattttgtctacaaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaagttgaaaatctccaaa 20297632  T
Q  118 tgccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctac 206  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||| |||| ||  ||||||||||||||||||||| |||||||||||    
T  20297633 tgccctaaacttggaatgccatgtcttccatctcttaaatccctcgatgtcgatccatgtaacaatgagttactgagatcaatctctac 20297721  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 52351034 - 52350946
Alignment:
Q  117 ttgccctaaacttggactgccatgtcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctcta 205  Q
    ||||||||||||||   ||| ||  |||||||| |||||||||||| |||| | ||||||||||| | ||||||| ||| |||| ||||    
T  52351034 ttgccctaaacttgtgttgcaattccttccatcccttaaagacctcattgtaattggatgtaacagtcagttactaaggccaatatcta 52350946  T

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Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 209
Target Start/End: Complemental strand, 26706482 - 26706314
Alignment:
Q  41 taccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatg 140  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||  |||| ||||   | |||||||||| || |||||||||||    
T  26706482 taccaaacatagaggggttattgaaagtggaaagaggaaaggtgtttccttgtctttctcgtttgacaatatactattgccctaagctaggactgccatg 26706383  T
Q  141 tcttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctctacctt 209  Q
    ||||||||||||||||  ||||  |||    |||||||||||||||||||||||||||||| |||||||    
T  26706382 tcttccatctcttaaatccctcaatgtttcgggatgtaacaatgagttactgaggtcaatccctacctt 26706314  T

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Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 7582681 - 7582801
Alignment:
Q  41 taccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatg 140  Q
    |||||||| |||||||||| ||||||||||||| |  ||||||||||||||||||||||| ||||   |||| | ||||||||||||||| ||| || ||    
T  7582681 taccaaacttagaggggttgttgaaagtggaaaaaaaggagatgtttccttgtctttctattttgaacatcaacaattgccctaaacttgaacttccgtg 7582780  T
Q  141 tcttccatctcttaaagacct 161  Q
    |||||||||| ||||||||||    
T  7582781 tcttccatctgttaaagacct 7582801  T

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Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 7098563 - 7098401
Alignment:
Q  43 ccaaacatagaggggttattgaaagtggaaagaggggagatgtttccttgtctttctaatttgtcaatcatcgattgccctaaacttggactgccatgtc 142  Q
    |||||| |||||||  | ||||||||||||||||  |||| ||||||||||||||||| ||||  ||||  | ||||||||||||||| ||| || ||||    
T  7098563 ccaaacttagagggactgttgaaagtggaaagagatgagacgtttccttgtctttctattttggaaatcgacaattgccctaaacttgaacttccgtgtc 7098464  T
Q  143 ttccatctcttaaagacctcgttgtcaatggatgtaacaatgagttactgaggtcaatctcta 205  Q
    |||||||| ||| |||||||  |||  ||| |||||| ||| || | |||| |||||||||||    
T  7098463 ttccatctgttagagacctctatgtagatgaatgtaataataagatgctgaagtcaatctcta 7098401  T

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