View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3627_low_8 (Length: 253)

Name: NF3627_low_8
Description: NF3627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3627_low_8
NF3627_low_8
[»] chr1 (42 HSPs)
chr1 (31-175)||(14586866-14587010)
chr1 (45-175)||(41723956-41724086)
chr1 (31-176)||(23983549-23983694)
chr1 (31-175)||(33801795-33801939)
chr1 (40-175)||(52631874-52632009)
chr1 (31-173)||(44754939-44755081)
chr1 (31-175)||(12700082-12700226)
chr1 (31-175)||(29961861-29962005)
chr1 (31-175)||(44496950-44497092)
chr1 (40-182)||(42882122-42882264)
chr1 (31-168)||(3517130-3517267)
chr1 (46-175)||(41899806-41899935)
chr1 (40-175)||(12528937-12529073)
chr1 (31-175)||(22859134-22859278)
chr1 (49-175)||(27217303-27217429)
chr1 (40-172)||(38861165-38861297)
chr1 (31-175)||(41086881-41087024)
chr1 (31-175)||(41091649-41091792)
chr1 (31-175)||(50261504-50261647)
chr1 (66-175)||(37952710-37952819)
chr1 (30-175)||(49852189-49852334)
chr1 (72-175)||(48963864-48963967)
chr1 (182-235)||(21719056-21719109)
chr1 (184-235)||(20887219-20887270)
chr1 (184-235)||(35521716-35521767)
chr1 (182-232)||(35055576-35055626)
chr1 (182-235)||(27329158-27329211)
chr1 (187-235)||(20913817-20913865)
chr1 (184-235)||(13103946-13103997)
chr1 (184-235)||(20932132-20932183)
chr1 (189-235)||(20346817-20346863)
chr1 (182-235)||(4975125-4975178)
chr1 (182-235)||(36355657-36355710)
chr1 (182-230)||(17023757-17023805)
chr1 (182-234)||(41217057-41217109)
chr1 (184-235)||(20446473-20446524)
chr1 (184-235)||(20532237-20532288)
chr1 (184-235)||(44320444-44320495)
chr1 (189-235)||(20348356-20348402)
chr1 (100-150)||(34551270-34551320)
chr1 (183-236)||(20954861-20954914)
chr1 (187-235)||(15860871-15860919)
[»] chr8 (44 HSPs)
chr8 (45-175)||(20092354-20092484)
chr8 (31-175)||(39259832-39259976)
chr8 (31-175)||(11076694-11076838)
chr8 (31-175)||(31700575-31700719)
chr8 (31-175)||(35683544-35683688)
chr8 (31-182)||(37098796-37098947)
chr8 (40-171)||(42131436-42131567)
chr8 (31-175)||(32338297-32338438)
chr8 (31-175)||(8239517-8239661)
chr8 (31-173)||(585927-586069)
chr8 (31-173)||(627854-627996)
chr8 (31-175)||(13545783-13545927)
chr8 (31-175)||(13678546-13678690)
chr8 (31-175)||(39318126-39318270)
chr8 (40-175)||(43098056-43098191)
chr8 (47-175)||(6347792-6347920)
chr8 (31-174)||(40104780-40104923)
chr8 (31-182)||(32947489-32947641)
chr8 (69-175)||(28249245-28249351)
chr8 (40-175)||(23143657-23143792)
chr8 (186-235)||(9950523-9950572)
chr8 (182-235)||(22221722-22221775)
chr8 (182-235)||(22228064-22228117)
chr8 (182-235)||(37612490-37612543)
chr8 (184-235)||(16404404-16404455)
chr8 (184-235)||(19992456-19992507)
chr8 (184-235)||(43372891-43372942)
chr8 (184-233)||(16193255-16193304)
chr8 (182-235)||(22982096-22982149)
chr8 (184-235)||(21493878-21493929)
chr8 (184-235)||(25296967-25297018)
chr8 (184-235)||(25758987-25759038)
chr8 (189-235)||(275256-275302)
chr8 (189-235)||(640547-640593)
chr8 (189-235)||(826353-826399)
chr8 (185-235)||(20560998-20561048)
chr8 (185-235)||(20572560-20572610)
chr8 (185-235)||(20653404-20653454)
chr8 (187-236)||(20529227-20529275)
chr8 (182-235)||(21258904-21258957)
chr8 (182-235)||(24278695-24278747)
chr8 (100-157)||(24733821-24733878)
chr8 (182-226)||(17285991-17286035)
chr8 (182-230)||(23837990-23838038)
[»] chr7 (41 HSPs)
chr7 (31-175)||(34847353-34847497)
chr7 (31-175)||(33951398-33951542)
chr7 (40-175)||(44866511-44866646)
chr7 (40-186)||(46255338-46255485)
chr7 (40-175)||(25528638-25528773)
chr7 (31-175)||(14816187-14816331)
chr7 (31-175)||(15263183-15263327)
chr7 (31-186)||(35794929-35795085)
chr7 (31-175)||(36311610-36311753)
chr7 (91-175)||(43458681-43458765)
chr7 (182-235)||(11288243-11288296)
chr7 (184-235)||(13036491-13036542)
chr7 (182-232)||(144451-144501)
chr7 (182-235)||(12247488-12247541)
chr7 (182-235)||(13275582-13275635)
chr7 (182-235)||(14268292-14268345)
chr7 (182-235)||(45451546-45451599)
chr7 (184-235)||(127228-127279)
chr7 (184-235)||(1936411-1936462)
chr7 (184-231)||(17816849-17816896)
chr7 (184-235)||(26068987-26069038)
chr7 (184-235)||(26069645-26069696)
chr7 (184-235)||(26093432-26093483)
chr7 (182-232)||(3895815-3895865)
chr7 (184-229)||(110659-110704)
chr7 (187-232)||(12369215-12369260)
chr7 (182-235)||(12759806-12759859)
chr7 (182-235)||(33560423-33560476)
chr7 (182-235)||(34240591-34240644)
chr7 (182-235)||(49047064-49047117)
chr7 (187-235)||(7293791-7293839)
chr7 (184-235)||(7283447-7283498)
chr7 (184-231)||(19050105-19050152)
chr7 (184-235)||(25124941-25124992)
chr7 (184-235)||(32493461-32493512)
chr7 (184-235)||(36053451-36053502)
chr7 (182-236)||(13378277-13378331)
chr7 (184-233)||(31079433-31079483)
chr7 (182-235)||(20582999-20583052)
chr7 (84-157)||(31267714-31267786)
chr7 (182-230)||(13390137-13390185)
[»] chr5 (43 HSPs)
chr5 (30-174)||(8735157-8735301)
chr5 (31-175)||(12785621-12785765)
chr5 (31-175)||(12724138-12724282)
chr5 (31-175)||(16513119-16513263)
chr5 (40-175)||(18809443-18809578)
chr5 (30-175)||(25976666-25976811)
chr5 (31-175)||(13821614-13821758)
chr5 (31-175)||(27114767-27114911)
chr5 (30-175)||(38678992-38679137)
chr5 (31-171)||(2605870-2606010)
chr5 (31-175)||(3557086-3557230)
chr5 (31-175)||(8197840-8197984)
chr5 (31-175)||(37013290-37013434)
chr5 (72-175)||(8298780-8298883)
chr5 (45-175)||(37883921-37884051)
chr5 (31-175)||(11719448-11719591)
chr5 (31-175)||(26279519-26279663)
chr5 (31-171)||(37029831-37029971)
chr5 (47-175)||(9714827-9714955)
chr5 (99-175)||(20337022-20337098)
chr5 (40-145)||(27347011-27347116)
chr5 (40-163)||(27950565-27950688)
chr5 (182-235)||(433260-433313)
chr5 (182-235)||(4866056-4866109)
chr5 (184-235)||(32951480-32951531)
chr5 (182-235)||(7729249-7729302)
chr5 (187-235)||(11584863-11584911)
chr5 (187-235)||(21651503-21651551)
chr5 (184-235)||(1167605-1167656)
chr5 (184-235)||(21205729-21205780)
chr5 (184-235)||(27181966-27182017)
chr5 (182-235)||(3674692-3674745)
chr5 (182-235)||(22662076-22662129)
chr5 (182-230)||(21222055-21222103)
chr5 (182-233)||(23467263-23467314)
chr5 (184-235)||(23515352-23515403)
chr5 (184-235)||(23980901-23980952)
chr5 (184-235)||(25944050-25944101)
chr5 (182-220)||(11336572-11336610)
chr5 (185-235)||(24182507-24182557)
chr5 (182-235)||(19349841-19349894)
chr5 (182-235)||(23494714-23494767)
chr5 (182-230)||(24224792-24224840)
[»] chr4 (59 HSPs)
chr4 (31-175)||(40728492-40728636)
chr4 (31-175)||(55137125-55137269)
chr4 (31-175)||(31093570-31093714)
chr4 (31-175)||(33281549-33281693)
chr4 (31-175)||(35159184-35159328)
chr4 (40-175)||(45462709-45462844)
chr4 (40-174)||(56463190-56463324)
chr4 (46-175)||(168051-168180)
chr4 (31-186)||(4189411-4189567)
chr4 (47-175)||(16024345-16024473)
chr4 (31-175)||(2013245-2013389)
chr4 (40-172)||(9035632-9035764)
chr4 (31-175)||(15542361-15542505)
chr4 (31-175)||(35319408-35319552)
chr4 (40-175)||(4048606-4048741)
chr4 (45-175)||(45229546-45229676)
chr4 (45-175)||(52501886-52502016)
chr4 (31-175)||(6963938-6964081)
chr4 (31-175)||(28780302-28780446)
chr4 (31-175)||(45925055-45925199)
chr4 (45-174)||(52416464-52416593)
chr4 (40-175)||(28310415-28310550)
chr4 (48-186)||(38217793-38217932)
chr4 (31-175)||(16452414-16452557)
chr4 (31-175)||(49374779-49374923)
chr4 (31-175)||(51539080-51539224)
chr4 (40-175)||(30004029-30004164)
chr4 (40-175)||(38550803-38550938)
chr4 (31-175)||(1603248-1603392)
chr4 (31-141)||(43841469-43841579)
chr4 (99-174)||(5419381-5419456)
chr4 (182-232)||(8871842-8871892)
chr4 (182-235)||(52264904-52264957)
chr4 (184-235)||(12836595-12836646)
chr4 (182-233)||(13808899-13808950)
chr4 (184-235)||(54117659-54117710)
chr4 (182-232)||(44347650-44347700)
chr4 (182-235)||(13247238-13247291)
chr4 (182-235)||(13722466-13722519)
chr4 (182-235)||(15045634-15045687)
chr4 (182-235)||(15108737-15108790)
chr4 (182-235)||(55375976-55376029)
chr4 (184-235)||(9296308-9296359)
chr4 (184-235)||(53704125-53704176)
chr4 (182-235)||(23269303-23269356)
chr4 (182-235)||(30231891-30231944)
chr4 (187-235)||(9290437-9290485)
chr4 (187-235)||(25118578-25118626)
chr4 (184-231)||(122690-122737)
chr4 (182-233)||(20812917-20812968)
chr4 (184-235)||(44056741-44056791)
chr4 (184-235)||(53907109-53907160)
chr4 (182-232)||(16733000-16733050)
chr4 (182-236)||(37956415-37956469)
chr4 (182-236)||(41165442-41165496)
chr4 (182-235)||(13438450-13438503)
chr4 (184-229)||(16523608-16523653)
chr4 (182-235)||(47534445-47534498)
chr4 (45-125)||(20754504-20754583)
[»] chr2 (44 HSPs)
chr2 (40-175)||(15912183-15912318)
chr2 (40-175)||(38208804-38208939)
chr2 (40-174)||(45234701-45234835)
chr2 (31-175)||(38703115-38703259)
chr2 (31-175)||(45117538-45117686)
chr2 (31-175)||(1209445-1209589)
chr2 (31-175)||(17137232-17137376)
chr2 (40-175)||(44760519-44760654)
chr2 (31-175)||(1115567-1115711)
chr2 (31-171)||(7941062-7941202)
chr2 (31-149)||(17309424-17309542)
chr2 (31-175)||(6404578-6404722)
chr2 (31-174)||(31993608-31993750)
chr2 (111-175)||(30490298-30490362)
chr2 (40-166)||(16414979-16415105)
chr2 (56-173)||(16251722-16251839)
chr2 (31-175)||(13279165-13279294)
chr2 (184-235)||(42535431-42535482)
chr2 (182-235)||(723194-723247)
chr2 (40-150)||(18965418-18965528)
chr2 (185-235)||(19794121-19794171)
chr2 (183-235)||(25602855-25602907)
chr2 (184-235)||(463514-463565)
chr2 (184-235)||(9652294-9652345)
chr2 (184-235)||(22863720-22863771)
chr2 (182-235)||(68799-68852)
chr2 (182-235)||(19433197-19433250)
chr2 (182-235)||(23836079-23836132)
chr2 (182-226)||(2664-2708)
chr2 (182-230)||(2155247-2155295)
chr2 (182-226)||(7322345-7322389)
chr2 (184-235)||(8892001-8892052)
chr2 (184-235)||(36890056-36890107)
chr2 (184-235)||(36981870-36981921)
chr2 (184-235)||(43642371-43642422)
chr2 (182-235)||(16446554-16446607)
chr2 (182-235)||(22579269-22579322)
chr2 (182-235)||(22762735-22762788)
chr2 (182-235)||(23821172-23821225)
chr2 (182-235)||(23830251-23830304)
chr2 (182-235)||(32466674-32466727)
chr2 (40-125)||(45536847-45536932)
chr2 (187-235)||(24293906-24293953)
chr2 (187-235)||(25875311-25875359)
[»] chr6 (23 HSPs)
chr6 (45-175)||(16395798-16395928)
chr6 (31-175)||(31722423-31722567)
chr6 (31-165)||(439488-439622)
chr6 (31-175)||(11975449-11975593)
chr6 (31-175)||(304220-304364)
chr6 (31-160)||(31318982-31319111)
chr6 (40-175)||(9304486-9304620)
chr6 (31-114)||(31271813-31271896)
chr6 (185-235)||(16086789-16086839)
chr6 (185-235)||(18399767-18399817)
chr6 (182-232)||(18571111-18571161)
chr6 (182-232)||(18777957-18778007)
chr6 (182-235)||(25743859-25743912)
chr6 (187-235)||(19982687-19982735)
chr6 (182-226)||(21623956-21624000)
chr6 (187-235)||(25633110-25633158)
chr6 (184-235)||(13014093-13014144)
chr6 (184-235)||(18584131-18584182)
chr6 (185-235)||(16107288-16107338)
chr6 (182-232)||(31629016-31629066)
chr6 (184-233)||(13620208-13620257)
chr6 (186-235)||(35008848-35008896)
chr6 (187-235)||(35014550-35014598)
[»] chr3 (60 HSPs)
chr3 (31-175)||(10508746-10508890)
chr3 (31-175)||(41182364-41182508)
chr3 (40-175)||(36402353-36402488)
chr3 (31-175)||(40940216-40940360)
chr3 (31-175)||(53816399-53816543)
chr3 (31-175)||(32530269-32530413)
chr3 (40-175)||(39587044-39587179)
chr3 (40-174)||(26501730-26501864)
chr3 (45-175)||(47647396-47647526)
chr3 (45-182)||(227838-227977)
chr3 (40-175)||(39353603-39353738)
chr3 (51-175)||(31764725-31764849)
chr3 (31-175)||(41193276-41193420)
chr3 (40-186)||(149780-149927)
chr3 (45-175)||(6936904-6937033)
chr3 (47-175)||(47013292-47013420)
chr3 (31-159)||(49165638-49165766)
chr3 (182-235)||(17955392-17955445)
chr3 (182-235)||(7854775-7854828)
chr3 (184-235)||(16181320-16181371)
chr3 (184-235)||(28558959-28559010)
chr3 (184-235)||(51960520-51960571)
chr3 (182-235)||(12348680-12348733)
chr3 (182-235)||(16880937-16880990)
chr3 (184-233)||(45582428-45582477)
chr3 (182-235)||(48422378-48422431)
chr3 (182-226)||(15879153-15879197)
chr3 (182-233)||(316879-316930)
chr3 (184-235)||(2050607-2050658)
chr3 (184-235)||(3578884-3578935)
chr3 (184-235)||(13839686-13839737)
chr3 (184-235)||(16995461-16995512)
chr3 (184-235)||(17102159-17102210)
chr3 (184-235)||(54037509-54037560)
chr3 (182-232)||(12487166-12487216)
chr3 (185-235)||(14304870-14304920)
chr3 (182-236)||(39657349-39657403)
chr3 (182-232)||(40939955-40940005)
chr3 (184-233)||(12029583-12029632)
chr3 (182-235)||(38528549-38528602)
chr3 (182-235)||(50111439-50111492)
chr3 (187-235)||(3993364-3993412)
chr3 (184-232)||(13818338-13818386)
chr3 (184-235)||(2845002-2845053)
chr3 (184-231)||(5240118-5240165)
chr3 (184-235)||(14285748-14285799)
chr3 (184-235)||(19232582-19232633)
chr3 (184-231)||(19260241-19260288)
chr3 (184-235)||(19947511-19947562)
chr3 (184-227)||(55513692-55513735)
chr3 (184-234)||(15856654-15856704)
chr3 (182-235)||(14527447-14527500)
chr3 (182-235)||(17522256-17522309)
chr3 (182-235)||(38810378-38810431)
chr3 (182-235)||(41662342-41662395)
chr3 (182-235)||(47784128-47784181)
chr3 (187-235)||(2448702-2448750)
chr3 (184-236)||(17192316-17192368)
chr3 (188-232)||(19570067-19570111)
chr3 (187-235)||(33342690-33342738)
[»] scaffold0121 (1 HSPs)
scaffold0121 (31-160)||(46976-47105)
[»] scaffold0209 (1 HSPs)
scaffold0209 (31-173)||(14688-14830)
[»] scaffold0116 (1 HSPs)
scaffold0116 (182-235)||(30908-30961)
[»] scaffold0035 (2 HSPs)
scaffold0035 (182-235)||(108834-108887)
scaffold0035 (182-235)||(117335-117388)
[»] scaffold1539 (1 HSPs)
scaffold1539 (184-235)||(356-407)
[»] scaffold1164 (1 HSPs)
scaffold1164 (184-235)||(2175-2226)
[»] scaffold0740 (1 HSPs)
scaffold0740 (184-235)||(5106-5157)
[»] scaffold0597 (1 HSPs)
scaffold0597 (184-231)||(373-420)
[»] scaffold0218 (1 HSPs)
scaffold0218 (184-235)||(4575-4626)
[»] scaffold0816 (1 HSPs)
scaffold0816 (182-232)||(2436-2486)
[»] scaffold0643 (1 HSPs)
scaffold0643 (182-236)||(313-367)
[»] scaffold0447 (2 HSPs)
scaffold0447 (182-232)||(5384-5434)
scaffold0447 (182-232)||(9998-10048)
[»] scaffold0383 (1 HSPs)
scaffold0383 (182-232)||(7993-8043)
[»] scaffold0023 (1 HSPs)
scaffold0023 (185-235)||(92483-92533)
[»] scaffold1867 (1 HSPs)
scaffold1867 (182-235)||(967-1020)
[»] scaffold0673 (2 HSPs)
scaffold0673 (182-235)||(6217-6270)
scaffold0673 (184-235)||(208-258)
[»] scaffold0537 (1 HSPs)
scaffold0537 (182-235)||(720-773)
[»] scaffold0243 (1 HSPs)
scaffold0243 (182-235)||(1732-1785)
[»] scaffold0190 (1 HSPs)
scaffold0190 (182-235)||(10762-10815)
[»] scaffold0183 (1 HSPs)
scaffold0183 (182-235)||(5060-5113)
[»] scaffold0117 (1 HSPs)
scaffold0117 (182-235)||(10938-10991)
[»] scaffold0083 (1 HSPs)
scaffold0083 (182-235)||(15657-15710)
[»] scaffold0014 (2 HSPs)
scaffold0014 (182-235)||(86158-86211)
scaffold0014 (182-235)||(160125-160178)
[»] scaffold0162 (4 HSPs)
scaffold0162 (187-235)||(12531-12579)
scaffold0162 (184-235)||(25834-25885)
scaffold0162 (182-235)||(6442-6495)
scaffold0162 (195-235)||(7621-7661)
[»] scaffold0021 (4 HSPs)
scaffold0021 (182-234)||(12880-12932)
scaffold0021 (182-235)||(16726-16779)
scaffold0021 (182-235)||(26257-26310)
scaffold0021 (187-230)||(131625-131668)
[»] scaffold1979 (1 HSPs)
scaffold1979 (184-235)||(64-115)
[»] scaffold0175 (1 HSPs)
scaffold0175 (184-235)||(5519-5570)
[»] scaffold0049 (1 HSPs)
scaffold0049 (184-235)||(20983-21034)
[»] scaffold0039 (1 HSPs)
scaffold0039 (184-235)||(11907-11958)
[»] scaffold0037 (2 HSPs)
scaffold0037 (184-235)||(24097-24148)
scaffold0037 (187-235)||(97639-97687)
[»] scaffold0034 (2 HSPs)
scaffold0034 (184-235)||(80667-80718)
scaffold0034 (184-235)||(41485-41536)
[»] scaffold0028 (1 HSPs)
scaffold0028 (184-235)||(107205-107256)
[»] scaffold0012 (1 HSPs)
scaffold0012 (184-235)||(246862-246913)
[»] scaffold0011 (1 HSPs)
scaffold0011 (184-235)||(122581-122632)
[»] scaffold0004 (1 HSPs)
scaffold0004 (184-235)||(192888-192939)
[»] scaffold0001 (1 HSPs)
scaffold0001 (184-235)||(69995-70045)
[»] scaffold0876 (1 HSPs)
scaffold0876 (182-232)||(589-639)
[»] scaffold0310 (1 HSPs)
scaffold0310 (182-232)||(5790-5840)
[»] scaffold0260 (2 HSPs)
scaffold0260 (189-235)||(9140-9186)
scaffold0260 (189-235)||(10679-10725)
[»] scaffold0068 (2 HSPs)
scaffold0068 (182-232)||(48950-49000)
scaffold0068 (182-232)||(62398-62448)
[»] scaffold0396 (1 HSPs)
scaffold0396 (182-235)||(11078-11131)
[»] scaffold0123 (1 HSPs)
scaffold0123 (31-124)||(35497-35589)
[»] scaffold0302 (1 HSPs)
scaffold0302 (187-235)||(12907-12955)
[»] scaffold0122 (1 HSPs)
scaffold0122 (187-235)||(19343-19391)
[»] scaffold0016 (1 HSPs)
scaffold0016 (184-232)||(165038-165086)
[»] scaffold0686 (1 HSPs)
scaffold0686 (188-235)||(5271-5318)
[»] scaffold0342 (1 HSPs)
scaffold0342 (182-233)||(13097-13148)
[»] scaffold0335 (1 HSPs)
scaffold0335 (184-235)||(6810-6861)
[»] scaffold0184 (1 HSPs)
scaffold0184 (184-235)||(30669-30720)
[»] scaffold0160 (1 HSPs)
scaffold0160 (184-235)||(811-861)
[»] scaffold0132 (1 HSPs)
scaffold0132 (184-235)||(43162-43213)
[»] scaffold0078 (1 HSPs)
scaffold0078 (184-235)||(42124-42175)
[»] scaffold0077 (1 HSPs)
scaffold0077 (184-235)||(14880-14931)
[»] scaffold0044 (1 HSPs)
scaffold0044 (184-235)||(39126-39177)
[»] scaffold0026 (1 HSPs)
scaffold0026 (184-235)||(89258-89309)
[»] scaffold1272 (1 HSPs)
scaffold1272 (182-236)||(1058-1112)
[»] scaffold0700 (1 HSPs)
scaffold0700 (182-236)||(3275-3329)
[»] scaffold0498 (1 HSPs)
scaffold0498 (189-235)||(9672-9718)
[»] scaffold0359 (1 HSPs)
scaffold0359 (182-232)||(2132-2182)
[»] scaffold0682 (1 HSPs)
scaffold0682 (184-229)||(7984-8029)
[»] scaffold0338 (1 HSPs)
scaffold0338 (182-235)||(9812-9865)
[»] scaffold0234 (1 HSPs)
scaffold0234 (184-233)||(16800-16848)
[»] scaffold0207 (1 HSPs)
scaffold0207 (184-229)||(11468-11513)
[»] scaffold0120 (1 HSPs)
scaffold0120 (182-235)||(22324-22376)
[»] scaffold0032 (1 HSPs)
scaffold0032 (184-233)||(56391-56440)
[»] scaffold0022 (1 HSPs)
scaffold0022 (182-235)||(111913-111966)
[»] scaffold0008 (1 HSPs)
scaffold0008 (182-235)||(127593-127646)
[»] scaffold0150 (1 HSPs)
scaffold0150 (182-226)||(29323-29367)
[»] scaffold0013 (1 HSPs)
scaffold0013 (183-235)||(36253-36304)


Alignment Details
Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 14587010 - 14586866
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14587010 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaacgaggat 14586911  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14586910 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 14586866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 41723956 - 41724086
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41723956 acaaccatggttttccatcgttggcctttcttagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcactgca 41724055  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||    
T  41724056 acgaagcgcggttcatctgagggtcatgtgg 41724086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 23983694 - 23983549
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23983694 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 23983595  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtggt 176  Q
    |||||||||||||||||||| || |||||| |||||||||||||||    
T  23983594 ggaaccgcgctgcaacgaagtgcagttcatttgagggtcatgtggt 23983549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 33801795 - 33801939
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  33801795 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaacttttagggtttgtatgaacggtcaataaggat 33801894  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  33801895 ggaaccgcgctgcaacgaagcgcggttcatctaagggtcatgtgg 33801939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 52632009 - 52631874
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52632009 cttctacaaccatggttttccatcgttggcctttcatagataaggacctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatagaaccgcg 52631910  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||||||||||||||||||||||||    
T  52631909 ctgcaacgaagtgcggttcatctgagggtcatgtgg 52631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 44755081 - 44754939
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44755081 ctcttcttccttctacaaccatggttttccatcgttggcttttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 44754982  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgt 173  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  44754981 ggaactgcgctgcaacgaagcgcggttcatctaagggtcatgt 44754939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 12700226 - 12700082
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12700226 ctcttcttccttctacaaccatggttttccatcgttggtctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 12700127  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||    
T  12700126 ggaaccgcgatgcaacgaagcgcggttcatttgagggtcatgtgg 12700082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 29961861 - 29962005
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29961861 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacagtcaatgaggat 29961960  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||    
T  29961961 ggaaccgcgctacaacgaagtgtggttcatctgagggtcatgtgg 29962005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 44496950 - 44497092
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    ||||||| ||||| |||||||||||||| || | |||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44496950 ctcttctttcttctacaaccatggtttttcatcgttggtct--catagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 44497047  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  44497048 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 44497092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 42882264 - 42882122
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||| ||||| | |||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  42882264 cttctacaaccatggtcttccatcattggcctttcatagataatggccttgttgaaaactttatgggtttgtatgaacggtcaatgaggatggaaccgcg 42882165  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtggttcttag 182  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  42882164 ctgcaacgaagtgcggttcatccgagggtcatgtggttcttag 42882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 3517267 - 3517130
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3517267 ctcttcttccttctacaaccatggttttccatcgttgacctttcatagataagggcctcgttgaaaactttcagggtttgtattaacggtcaatgaggat 3517168  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggt 168  Q
    |||||| |||||||||||| ||||||| ||||||||||    
T  3517167 ggaaccacgctgcaacgaaacgcggtttatctgagggt 3517130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 41899935 - 41899806
Alignment:
Q  46 caaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaa 145  Q
    ||||||||||||| || | ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  41899935 caaccatggtttttcatcgttggcctttcatagataagggtctcgttgaaaacttccagggtttgtatgaacggtcaatgaggatgaaaccgcgcttcaa 41899836  T
Q  146 cgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| ||||||||||||||||||||||||    
T  41899835 cgaagtgcggttcatctgagggtcatgtgg 41899806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 12528937 - 12529073
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaacttt-cagggtttgtatgaacggtcaatgaggatggaaccgc 138  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12528937 cttctacaaccatggttttccattgttggcctttcatagataagggcctcgttgaaaacttttcagggtttgtatgaacggtcaatgaggatggaaccgc 12529036  T
Q  139 gctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| |||||| ||  ||||||||||||||||||||    
T  12529037 gctgcgacgaagtgcaattcatctgagggtcatgtgg 12529073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 22859134 - 22859278
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||| ||||||||| || | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22859134 ctcttcttccttctacaatcatggtttttcatcgttggcgtttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 22859233  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||    
T  22859234 ggaaccgcgttacaacgaagtgcggttcatctgagggtcatgtgg 22859278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 27217303 - 27217429
Alignment:
Q  49 ccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacga 148  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
T  27217303 ccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttaagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaaaaa 27217402  T
Q  149 agcgcggttcatctgagggtcatgtgg 175  Q
    || |||||||||||| |||||||||||    
T  27217403 agtgcggttcatctgggggtcatgtgg 27217429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 38861165 - 38861297
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  38861165 cttctacaacgatggttttccatcgttggcctttcatagataagggcctcgtggaaaactttcagggtttgtatgaacggtcaatgaggatggaactgcg 38861264  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatg 172  Q
    |||||| |||| |||| |||| |||||||||||    
T  38861265 ctgcaatgaagtgcggctcatatgagggtcatg 38861297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 41086881 - 41087024
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  41086881 ctcttcttccttctacaaccatggtttttcatcgttggcctttcatagataatgacctctttgaaaactttcagggtttgtatgaacggtcaatgaggat 41086980  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| || ||||| | ||||||||||||||||||||||    
T  41086981 ggaaccgcgct-catcgaagtgaggttcatctgagggtcatgtgg 41087024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 41091649 - 41091792
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  41091649 ctcttcttccttctacaaccatggtttttcatcgttggcctttcatagataatgacctctttgaaaactttcagggtttgtatgaacggtcaatgaggat 41091748  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| || ||||| | ||||||||||||||||||||||    
T  41091749 ggaaccgcgct-catcgaagtgaggttcatctgagggtcatgtgg 41091792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 50261647 - 50261504
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50261647 ctcttcttccttctacaaccatggtttttcatcgttagcttttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 50261548  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    | |||||||||||||| ||| ||||||||||| | ||||||||||    
T  50261547 gtaaccgcgctgcaacaaagtgcggttcatct-aaggtcatgtgg 50261504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 37952710 - 37952819
Alignment:
Q  66 tggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgag 165  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||    
T  37952710 tggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacaatcaatgaggatggaaccgcgctgcaacgaaacgcggttcatctaag 37952809  T
Q  166 ggtcatgtgg 175  Q
    |||| |||||    
T  37952810 ggtcgtgtgg 37952819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 49852189 - 49852334
Alignment:
Q  30 tctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgagga 129  Q
    ||||||||  |||| |||||||||||||| || | ||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| | ||||    
T  49852189 tctcttcttccttctacaaccatggtttttcaacgttgccctttcatagataagggtctcattgaaaactttcagggattgtatgaacggtcactaagga 49852288  T
Q  130 tggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||| |||| ||||||||| || |||||||||||    
T  49852289 tggaaccgcgctgcaatgaagtgcggttcatttgggggtcatgtgg 49852334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 48963967 - 48963864
Alignment:
Q  72 ttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcat 171  Q
    ||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  48963967 ttcatagataaaggtctcgtttaaaacttttagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcacagttcatttgagggtcat 48963868  T
Q  172 gtgg 175  Q
    ||||    
T  48963867 gtgg 48963864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 21719109 - 21719056
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  21719109 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 21719056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 20887219 - 20887270
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  20887219 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 20887270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 35521716 - 35521767
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  35521716 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 35521767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 35055626 - 35055576
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  35055626 gcttgtgtgtgattattcatcattgggtgtattttcatgggttttcgtgtt 35055576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 27329158 - 27329211
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  27329158 gcttgtgtgtgatcattcatcattgtgtgcattttcatgggtttccgtgttaga 27329211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 20913865 - 20913817
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  20913865 tgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 20913817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 13103997 - 13103946
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  13103997 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 13103946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 20932183 - 20932132
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  20932183 ttgtgtgtgattattcatcatttggtgcattttcatgggtttccgtgttaga 20932132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 20346863 - 20346817
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||    
T  20346863 tgtgattattcatcattgggtgtattttcatgggtttccatgttaga 20346817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4975178 - 4975125
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||| | ||||| ||| ||||||||||||||||||||||||    
T  4975178 gcttgtgtgtgaatattaatcattgggtgcattttcatgggtttccgtgttaga 4975125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 36355657 - 36355710
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||    
T  36355657 gcttgtgtgtaattattcatcattgggtgtatttacatggatttccgtgttaga 36355710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 17023805 - 17023757
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||    
T  17023805 gcttgtgtgtgattattcatcattgggtgcattttcatgggttttcgtg 17023757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 41217057 - 41217109
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttag 234  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||| ||||||||    
T  41217057 gcttgtgtgtgaatattcatcattgggtgcattttcatgggttttcgtgttag 41217109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 20446524 - 20446473
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||  ||| ||||| ||| ||||||||||||||||||||||||    
T  20446524 ttgtgtgtgatttatcatcattgggtgcattttcatgggtttccgtgttaga 20446473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 20532288 - 20532237
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||  ||| ||||| ||| ||||||||||||||||||||||||    
T  20532288 ttgtgtgtgatttatcatcattgggtgcattttcatgggtttccgtgttaga 20532237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 44320495 - 44320444
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||||   ||| ||| ||||||||||||||||||||||||    
T  44320495 ttgtgtgtgattattcatacttgggtgcattttcatgggtttccgtgttaga 44320444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 20348402 - 20348356
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||  ||||||||||||| |||||||||||||    
T  20348402 tgtgattattcatcattggatgtattttcatggatttccgtgttaga 20348356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 34551270 - 34551320
Alignment:
Q  100 ttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaag 150  Q
    ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||    
T  34551270 ttcagggattgtatgaacggtcaatgaggatggcaacgcactgcaaagaag 34551320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 20954861 - 20954914
Alignment:
Q  183 cttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    |||||||||||||| ||| ||||| ||| |||||||||||||| |||| |||||    
T  20954861 cttgtgtgtgattaatcatcattgcgtgcattttcatgggttttcgtgctagag 20954914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 15860871 - 15860919
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||| ||| ||| ||||| ||| ||||||||||||||||||||||||    
T  15860871 tgtgtggttaatcatcattgggtgcattttcatgggtttccgtgttaga 15860919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 7e-61; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 20092354 - 20092484
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20092354 acaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 20092453  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| ||||||||||||||||||||||||    
T  20092454 acgaagtgcggttcatctgagggtcatgtgg 20092484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 39259976 - 39259832
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39259976 ctcttcttccttctacaaccatggttttccatcgttggtctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 39259877  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  39259876 ggaaccgcgctgcaacgaagcgcggttcatttgagggtcatgtgg 39259832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 11076694 - 11076838
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11076694 ctcttcttccttctacaaccatggtttttcatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggccaatgaggat 11076793  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11076794 ggaaccgtgctgcaacgaagtgcggttcatctgagggtcatgtgg 11076838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 31700719 - 31700575
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  31700719 ctcttcttccttctacaaccatggttttccatcattggtctttcatagataagggcctcgttgaaaactttcagggtttgtgtgaacggacaatgaggat 31700620  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  31700619 ggaaccgcgctgcaacgaagtgcggttcatcttagggtcatgtgg 31700575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 35683688 - 35683544
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35683688 ctcttcttccttctacaaccatggttttccatcgttggcttttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 35683589  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||| ||||||||||||||| | |||||||||||||||| |||||    
T  35683588 ggaatcgcgctgcaacgaagtgtggttcatctgagggtcctgtgg 35683544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 37098796 - 37098947
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||| |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37098796 ctcttcttccttctacaatcatggttttccatcgttgacctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 37098895  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtggttcttag 182  Q
    ||||| ||| | |||||||| ||||||||||||| |||||||||||||||||    
T  37098896 ggaactgcgttacaacgaagtgcggttcatctgaaggtcatgtggttcttag 37098947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 42131567 - 42131436
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42131567 cttctacaaccatggttttccaccgttggcctttcatagataagtgcatcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 42131468  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcat 171  Q
    |||||||| ||| |||||||||||||||||||    
T  42131467 ctgcaacggagcacggttcatctgagggtcat 42131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 32338297 - 32338438
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    ||||||| ||||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32338297 ctcttctttcttctacaaccatggttttccatcgttggtctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 32338396  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||   ||||||||| || |||||||||||    
T  32338397 ggaaccgcgctgcaacga---gcggttcatttgggggtcatgtgg 32338438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 8239661 - 8239517
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  8239661 ctcttcttccttctacaaccatggttttccatcattggcctttcatagataagggtctcattgaaaactttaagggtttgtatgaacggtcaatgaggat 8239562  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  8239561 ggaaccgcgctgcaacgaagtgcggttcctctaagggtcatgtgg 8239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 586069 - 585927
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  586069 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaacttttagggtttgtatgaacgatcaatgaggat 585970  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgt 173  Q
    | |||||| ||||||||||| ||||||||||| ||||||||||    
T  585969 gaaaccgcactgcaacgaagtgcggttcatctaagggtcatgt 585927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 627854 - 627996
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  627854 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaacttttagggtttgtatgaacgatcaatgaggat 627953  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgt 173  Q
    | |||||| ||||||||||| ||||||||||| ||||||||||    
T  627954 gaaaccgcactgcaacgaagtgcggttcatctaagggtcatgt 627996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 13545927 - 13545783
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  13545927 ctcttcttccttctacaaccatggttttccatcgtaggtctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggttaatgatgat 13545828  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| |||||||||| || |||||||||||||||||||||    
T  13545827 ggaaccgcgttgcaacgaagtgcagttcatctgagggtcatgtgg 13545783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 13678546 - 13678690
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  13678546 ctcttcttccttctacaaccatggttttccatcgtaggtctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggttaatgatgat 13678645  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| |||||||||| || |||||||||||||||||||||    
T  13678646 ggaaccgcgttgcaacgaagtgcagttcatctgagggtcatgtgg 13678690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 39318270 - 39318126
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||| |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39318270 ctcttcttccttctacaacaatggtttttcatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggac 39318171  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||| ||  |||||||||||||| |||||||||    
T  39318170 ggaaccgcgctgcaacaaaatgcggttcatctgagagtcatgtgg 39318126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 43098191 - 43098056
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||| ||||||| | || |||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||    
T  43098191 cttctacaaccatgattttccatcgtttgcctttcatagataagggtctcgttgaaaacttttagggtttgtatgaacgatcaatgaggatggaactgcg 43098092  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43098091 ctgcaacgaagtgcggttcatctgagggtcatgtgg 43098056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 6347792 - 6347920
Alignment:
Q  47 aaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaac 146  Q
    |||||| ||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||    
T  6347792 aaccatcgtttttcatcgttggcctttcatagataagggtctcgttgaaaactttcaaggtttgtatgaacggtcaatgtggatggaacagtgctgcaac 6347891  T
Q  147 gaagcgcggttcatctgagggtcatgtgg 175  Q
    |||| ||||||||||||||||||||||||    
T  6347892 gaagtgcggttcatctgagggtcatgtgg 6347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 40104923 - 40104780
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  40104923 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacgttcaatgaggat 40104824  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    |||| ||  ||||||||||  | ||||||||||| |||||||||    
T  40104823 ggaaacgtactgcaacgaaatgtggttcatctgaaggtcatgtg 40104780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 32947489 - 32947641
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||| |||| |||||  |||||||||| | |||| |||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||  ||    
T  32947489 ctcttctaccttctacaactgtggttttccatcgttggtctttcatatataaggatctcgttgaaaacttttagggtttgtatgaacggtcaatgaaaat 32947588  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtca-tgtggttcttag 182  Q
    ||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||    
T  32947589 ggaaccgcgctgcaatgaagtgcggttcatatgagggtcagtgtggttcttag 32947641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 28249245 - 28249351
Alignment:
Q  69 cctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||  ||||    
T  28249245 cctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgtggatggaaccgtgctgcaacgaagtgcggttcatctaggggt 28249344  T
Q  169 catgtgg 175  Q
    | |||||    
T  28249345 cgtgtgg 28249351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 23143792 - 23143657
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||| ||||||| | | ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23143792 cttctacaaccatgattttccatcgtgggcctttcatagataaggatctcgttgaaaactttcagggtttgtatgaacgggcaatgagaatggaaccgcg 23143693  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| | ||| |||||||||||  |||| ||||||    
T  23143692 ctgcagcaaagtgcggttcatctaggggttatgtgg 23143657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9950523 - 9950572
Alignment:
Q  186 gtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  9950523 gtgtgtgattattcatcattgggtgtattttcatgggtttccgtgttaga 9950572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22221722 - 22221775
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  22221722 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 22221775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22228064 - 22228117
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  22228064 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 22228117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 37612543 - 37612490
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  37612543 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 37612490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 16404404 - 16404455
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  16404404 ttgtgtgtgattattcatcattgggtgcatttgcatgggtttccgtgttaga 16404455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 19992456 - 19992507
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  19992456 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 19992507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 43372891 - 43372942
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  43372891 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 43372942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 16193255 - 16193304
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    |||||||| |||||||| ||||| ||| ||||||||||||||||||||||    
T  16193255 ttgtgtgttattattcatcattgggtgcattttcatgggtttccgtgtta 16193304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 22982149 - 22982096
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||  ||| ||||||||||||||||||||||||    
T  22982149 gcttgtgtgtgatcattcatcatttggtgcattttcatgggtttccgtgttaga 22982096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 21493878 - 21493929
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||| |||||    
T  21493878 ttgtgtgtgattattcatcattgggtgcattttcatggatttccgtattaga 21493929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 25297018 - 25296967
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| | ||||| ||| |||||||||||||| |||||||||    
T  25297018 ttgtgtgtgattatttatcattgggtgcattttcatgggttttcgtgttaga 25296967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 25759038 - 25758987
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| | ||||| ||| |||||||||||||| |||||||||    
T  25759038 ttgtgtgtgattatttatcattgggtgcattttcatgggttttcgtgttaga 25758987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 275302 - 275256
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||| ||| ||||||||| ||||||||||||| ||||||||||    
T  275302 tgtgattaatcatcattgagtgcattttcatgggttcccgtgttaga 275256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 640547 - 640593
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||| ||| ||||||||| ||||||||||||| ||||||||||    
T  640547 tgtgattaatcatcattgagtgcattttcatgggttcccgtgttaga 640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 826353 - 826399
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||| ||| ||||||||| ||||||||||||| ||||||||||    
T  826353 tgtgattaatcatcattgagtgcattttcatgggttcccgtgttaga 826399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20560998 - 20561048
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||  ||||| ||| |||| |||||||||||||||||||    
T  20560998 tgtgtgtgattattcttcattgggtgcatttccatgggtttccgtgttaga 20561048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20572560 - 20572610
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||  ||||| ||| |||| |||||||||||||||||||    
T  20572560 tgtgtgtgattattcttcattgggtgcatttccatgggtttccgtgttaga 20572610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20653404 - 20653454
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| ||||  ||| |||| |||||||||||||||||||    
T  20653404 tgtgtgtgattattcatcattaggtgcatttccatgggtttccgtgttaga 20653454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 20529227 - 20529275
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    |||||||||||||| ||||| ||| |||||||| ||||||||||||||||    
T  20529227 tgtgtgattattcatcattgggtgcattttcat-ggtttccgtgttagag 20529275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 21258904 - 21258957
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||| || |||||||||    
T  21258904 gcttgtgtgtgatcattcaacattgggtgcattttcatgggctttcgtgttaga 21258957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24278695 - 24278747
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||||| ||| |||||||||||||| |||||||||    
T  24278695 gcttgtgtgtgattatt-atcattgggtgcattttcatgggttttcgtgttaga 24278747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 24733878 - 24733821
Alignment:
Q  100 ttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggtt 157  Q
    ||||||| ||||||||||||| |||| ||||||  || |||||||| |||||||||||    
T  24733878 ttcagggattgtatgaacggttaatggggatggtgccacgctgcaaagaagcgcggtt 24733821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 17286035 - 17285991
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttc 226  Q
    ||||||||||||||||||| || || ||| |||||||||||||||    
T  17286035 gcttgtgtgtgattattcatcactgggtgcattttcatgggtttc 17285991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 23838038 - 23837990
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||| ||||    
T  23838038 gcttgtgtgtgaatattcatcattgggtgcattttcatgggttttcgtg 23837990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 34847497 - 34847353
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    ||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34847497 ctcttctttcttctacaaccatagttttccatcgttggcctttcatagataagggcctcgttgaaaactttcaggatttgtatgaacggtcaatgaggat 34847398  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  34847397 ggaaccgcgctgcaatgaagcgcggttcatctgagggtcatgtgg 34847353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 33951398 - 33951542
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33951398 ctcttcttccttctacaaccatggttttccatcgttggtctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 33951497  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  33951498 ggaaccgcgctacaacgaagcgcagttcatctgagggtcatgtgg 33951542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 44866511 - 44866646
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44866511 cttctacaaccatggttttccatcgttggcctttcatagataaggacctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 44866610  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||| |||||| ||||||||||||||||||||||||    
T  44866611 ctgctacgaagtgcggttcatctgagggtcatgtgg 44866646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 46255338 - 46255485
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  46255338 cttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggttaatgaggatggaaccacg 46255437  T
Q  140 ctgcaacgaagcgcggttcatctgagggtca-tgtggttcttagcttg 186  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||    
T  46255438 cttcaacgaagcgcggttcatctgagggtcagtgtggttcttagcttg 46255485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 25528773 - 25528638
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  25528773 cttctacaaccatggttttccatcattggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggttaatgaggacggaaccgcg 25528674  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| || |||||||||||||||||||||    
T  25528673 ctgcaacgaagtgcagttcatctgagggtcatgtgg 25528638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 14816331 - 14816187
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||||||   || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14816331 ctcttcttccttctacaaccatggttttccattgttagcctttcatagataagggcctcgtggaaaactttcagggtttatatgaacggtcaatgaggat 14816232  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  14816231 ggaaccgcgctgcaacgaagtgcggttcttctaagggtcatgtgg 14816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 15263327 - 15263183
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||||||   || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  15263327 ctcttcttccttctacaaccatggttttccattgttagcctttcatagataagggcctcgtggaaaactttcagggtttatatgaacggtcaatgaggat 15263228  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  15263227 ggaaccgcgctgcaacgaagtgcggttcttctaagggtcatgtgg 15263183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 35794929 - 35795085
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  35794929 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaattttcaaggtttgtatgaacagtcaatgaggat 35795028  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtca-tgtggttcttagcttg 186  Q
    ||||||||| ||||||||||  ||||||| |||||||||| |||| |||||||||||    
T  35795029 ggaaccgcgttgcaacgaagtacggttcacctgagggtcagtgtgattcttagcttg 35795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 36311753 - 36311610
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| || |||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  36311753 ctcttcttccttctacgaccatggtttcccatcgttggcctttcatagataaaggcctcgttgaaaactttcagggtttgtatgaacggttaatgaggat 36311654  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    | ||| |||||||||||||||||||||||||||| ||||||||||    
T  36311653 gaaactgcgctgcaacgaagcgcggttcatctga-ggtcatgtgg 36311610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 43458681 - 43458765
Alignment:
Q  91 ttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  43458681 ttgaaaactttcagggtttgtatgaacggtaaatgaggatggaaccgcgctgcaacgaggtgcggttcatctgagggtcatgtgg 43458765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 11288296 - 11288243
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  11288296 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 11288243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 13036491 - 13036542
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  13036491 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 13036542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 144501 - 144451
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  144501 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgtt 144451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12247488 - 12247541
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  12247488 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttccgtgttaga 12247541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13275635 - 13275582
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  13275635 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttccgtgttaga 13275582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 14268292 - 14268345
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  14268292 gcttgtgtgtgattatttatcattgggtgtattttcatgggttttcgtgttaga 14268345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 45451546 - 45451599
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||    
T  45451546 gcttgtgtgtgattattcatcattgggtgcattttcatggatttccgtgttaga 45451599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 127279 - 127228
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  127279 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 127228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 1936411 - 1936462
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  1936411 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 1936462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 17816849 - 17816896
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgt 231  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  17816849 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgt 17816896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 26068987 - 26069038
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  26068987 ttgtgtgtgattattcatcattgactgcattttcatgggttttcgtgttaga 26069038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 26069645 - 26069696
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  26069645 ttgtgtgtgattattcatcattgactgcattttcatgggttttcgtgttaga 26069696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 26093432 - 26093483
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  26093432 ttgtgtgtgattattcatcattgactgcattttcatgggttttcgtgttaga 26093483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 3895865 - 3895815
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||| |||||||    
T  3895865 gcttgtgtgtgattattcatcattgggtgcattttcatgggttaccgtgtt 3895815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 110659 - 110704
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgt 229  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  110659 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgt 110704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 12369215 - 12369260
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||    
T  12369215 tgtgtgattattcatcattgagttcattttcatgggtttccgtgtt 12369260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 12759859 - 12759806
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| |||||||||| || ||||||||||    
T  12759859 gcttgtgtgtgattattcatcattgggtgcattttcatggattcccgtgttaga 12759806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 33560476 - 33560423
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||| | ||||||||| |||||||||||||| |||||||||    
T  33560476 gcttgtgtgtgaatatttatcattgagtgcattttcatgggttttcgtgttaga 33560423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 34240591 - 34240644
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||| |||||||| |||||||||    
T  34240591 gcttgtgtgtgattattcatcattgggtgcattttaatgggttttcgtgttaga 34240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 49047064 - 49047117
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||||||    
T  49047064 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttctgtgttaga 49047117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 7293839 - 7293791
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  7293839 tgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 7293791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 7283447 - 7283498
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| | ||||| ||| |||||||||||||||||| |||||    
T  7283447 ttgtgtgtgattattaatcattgggtgcattttcatgggtttccgtattaga 7283498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 19050152 - 19050105
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgt 231  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||    
T  19050152 ttgtgtgtgattattcatcattgggtgcattttcatgggttttcgtgt 19050105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 25124992 - 25124941
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||| ||| |||||||||||||||||| |||||    
T  25124992 ttgtgtgtgattattcatctttgggtgcattttcatgggtttccgtattaga 25124941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 32493461 - 32493512
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||| |||||||||    
T  32493461 ttgtgtgtgattattcatcattgggtgcattttcatgagttttcgtgttaga 32493512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 36053502 - 36053451
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||    
T  36053502 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgataga 36053451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 13378331 - 13378277
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||||| |||| |||||    
T  13378331 gcttgtgtgtgattaatcatcattgggtgcattttcatgggttttcgtgctagag 13378277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 31079433 - 31079483
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgta-ttttcatgggtttccgtgtta 233  Q
    ||||||||||||||||| ||||||||| | ||||||||| |||||||||||    
T  31079433 ttgtgtgtgattattcatcattgagtgcatttttcatggatttccgtgtta 31079483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 20582999 - 20583052
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | | ||| ||| |||||||||||||| |||||||||    
T  20582999 gcttgtgtgtgattatttatcgttgggtgcattttcatgggttttcgtgttaga 20583052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 31267786 - 31267714
Alignment:
Q  84 ggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggtt 157  Q
    |||||| ||||||| |||||||| ||||||||||||||||||  ||||| | ||| |||||| |||| ||||||    
T  31267786 ggcctctttgaaaa-tttcagggattgtatgaacggtcaatggtgatggcaacgcactgcaaagaagtgcggtt 31267714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 13390185 - 13390137
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    ||||||||||||||||||| ||||| ||| || ||||||||||| ||||    
T  13390185 gcttgtgtgtgattattcatcattgggtgcatgttcatgggttttcgtg 13390137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 8735157 - 8735301
Alignment:
Q  30 tctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgagga 129  Q
    ||||||||  |||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8735157 tctcttcttccttctacaaccatggttttccattgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtataaacggtcaatgagga 8735256  T
Q  130 tggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8735257 tggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtg 8735301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 12785621 - 12785765
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12785621 ctcttcttccttctacaaccatggttttccatggttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaataaggat 12785720  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12785721 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 12785765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 12724138 - 12724282
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12724138 ctcttcttccttctacaaccatggttttccatggttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaataaggat 12724237  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  12724238 ggaaccgcgctgcaatgaagcgcggttcatctgagggtcatgtgg 12724282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 16513263 - 16513119
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16513263 ctcttcttccttctacaactatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacagtcaatgaggat 16513164  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  16513163 ggaaccgcgctgcaacgaagcgcggttcatccgagggtcatgtgg 16513119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 18809443 - 18809578
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18809443 cttctacaatcatggttttccatcattggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaactgcg 18809542  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||| |||||||||||||||||||||||    
T  18809543 ctgcaacgaagcacggttcatctgagggtcatgtgg 18809578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 25976811 - 25976666
Alignment:
Q  30 tctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgagga 129  Q
    ||||||||  |||| ||||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25976811 tctcttcttccttcaacaaccatggttttccatcgttggcttttcatagataagggcctcattgaaaactttcagggtttgtatgaacggtcaatgagga 25976712  T
Q  130 tggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  25976711 tggaaccgcgctgcaacgaagtgcggttcatctgggggtcatgtgg 25976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 13821758 - 13821614
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13821758 ctcttcttccttctacaaccatggatttccatcgctggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 13821659  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  13821658 ggaaccgcgctacaatgaagcgcggttcatctgagggtcatgtgg 13821614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 27114767 - 27114911
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27114767 ctcttcttccttctacaaccatagttttccatcgttggcctttcatagataaggacctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 27114866  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  27114867 ggaaccgcgctgcaacgaagtacggttcatctgagggtcatgtgg 27114911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 38679137 - 38678992
Alignment:
Q  30 tctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgagga 129  Q
    ||||||||  |||| ||||||||| ||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38679137 tctcttcttccttctacaaccatgattttccatcgttggtctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgagga 38679038  T
Q  130 tggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  38679037 tggaaccgcgctgcaatgaagcgcagttcatctgagggtcatgtgg 38678992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 2606010 - 2605870
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||| |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||    
T  2606010 ctcttcttccttctacaaccatggttttccatcgttgtcctttcatagataaaggtcttgttgaaaactttcagggtttgtatgaacggtcaatgaggat 2605911  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcat 171  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  2605910 ggaaccgcgctgcaacgaagtgcggttcatctgagggtcat 2605870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 3557086 - 3557230
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  3557086 ctcttcttccttctacaaccatggttttccatcgttggcttttcatagataagggtctcgttgaaaactttcaaggtttgtatgaacgatcaatgaggat 3557185  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  3557186 ggaaccgcgctgcaacgaagtgcagttcatctgagggtcatgtgg 3557230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 8197840 - 8197984
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8197840 ctcttcttccttctacaaccatggtttttcatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgtggat 8197939  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||    
T  8197940 ggaaccgcgctgcaacgaagtgcggttcatcttagggtcctgtgg 8197984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 37013290 - 37013434
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    ||||||| ||||| ||||||||||||||||| | |||| ||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  37013290 ctcttctttcttctacaaccatggttttccatcgttggtctttcatagataacgacctcgttgaaaactttcagggtttgtatgaacggacaatgaggat 37013389  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||    
T  37013390 ggaaccgcgctgcaaagaagcgtggttcatctgggggtcatgtgg 37013434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 8298883 - 8298780
Alignment:
Q  72 ttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcat 171  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8298883 ttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcat 8298784  T
Q  172 gtgg 175  Q
    ||||    
T  8298783 gtgg 8298780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 37883921 - 37884051
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    |||||||| |||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||  ||||    
T  37883921 acaaccatcgttttccaacgttggcctttcatagataagggtctcgttgaaaattttcagggtttgtatgaacggtcaataaggatggaaccgcattgca 37884020  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    | |||| ||||||||||||||||||||||||    
T  37884021 atgaagtgcggttcatctgagggtcatgtgg 37884051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 11719591 - 11719448
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||| ||| || | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  11719591 ctcttcttccttctacaaccatggattttcatcgttggcctttcatagataagggcctcgttgaaa-ctttcagggtttgtatgaacggttaatgaggat 11719493  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||  |||||||||||| ||||||| ||||||||||||||||    
T  11719492 ggaaccatgctgcaacgaagtgcggttcctctgagggtcatgtgg 11719448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 26279519 - 26279663
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  26279519 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataatggcctcgttgaaaactttcagggtttgtatgaatggtcaatgaggat 26279618  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| || ||||||||| | | |||||||||| || ||||||||    
T  26279619 ggaactgcactgcaacgaggtgtggttcatctggggatcatgtgg 26279663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 37029971 - 37029831
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||| |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37029971 ctcttcttccttctacaaccatgatttttcatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacagtcaatgaggat 37029872  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcat 171  Q
    | ||| |||||||||||||| ||  ||||||||||||||||    
T  37029871 gtaactgcgctgcaacgaagtgcaattcatctgagggtcat 37029831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 9714955 - 9714827
Alignment:
Q  47 aaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaac 146  Q
    ||||||||||||||| | |||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  9714955 aaccatggttttccatcgttggtctttcatagatgtgggcctcgttgaaaactttcaaggtttgtatgaacggtcaatgaggatggaaccgtgctgcaac 9714856  T
Q  147 gaagcgcggttcatctgagggtcatgtgg 175  Q
     ||| |||| ||||||| |||||||||||    
T  9714855 aaagtgcgggtcatctgggggtcatgtgg 9714827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 20337098 - 20337022
Alignment:
Q  99 tttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  20337098 tttcagggtttgtatgaacggtcaacgaggatggaaccgcgctgcaataaagtgcggttcatctgagggtcatgtgg 20337022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 27347116 - 27347011
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||  |||||| | ||| ||||||||||| |  |||||| || |||| |||||||| |||||||||||||||||| |||||||||||||    
T  27347116 cttctacaaccatgtgtttccatcgttgacctttcatagaaagaggcctctttaaaaattttcagggattgtatgaacggtcaatggggatggaaccgcg 27347017  T
Q  140 ctgcaa 145  Q
    ||||||    
T  27347016 ctgcaa 27347011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 27950565 - 27950688
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||  |||||| | || |||||||||| | |  |||||| ||| ||| |||||||| |||||||||| |||||||  ||||||||||||    
T  27950565 cttctacaaccatgtgtttccatcgttagcctttcataaaaagaggcctctttggaaattttcagggattgtatgaacagtcaatggagatggaaccgcg 27950664  T
Q  140 ctgcaacgaagcgcggttcatctg 163  Q
    |||| | |||| ||||||||||||    
T  27950665 ctgcgaagaagtgcggttcatctg 27950688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 433313 - 433260
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  433313 gcttgtgtgtgattattcatcattgagtgcattttcatgggttttcgtgttaga 433260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4866109 - 4866056
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  4866109 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 4866056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 32951531 - 32951480
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  32951531 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 32951480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7729302 - 7729249
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  7729302 gcttgtgtgtgaatattcatcattgggtgcattttcatgggtttccgtgttaga 7729249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 11584911 - 11584863
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  11584911 tgtgtgattattcatcatcgagtgcattttcatgggtttccgtgttaga 11584863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 21651551 - 21651503
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||    
T  21651551 tgtgtgattattcatcattgagtgcatcttcatgggtttccgtgttaga 21651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 1167605 - 1167656
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||  || ||||||||||||||||||||||||    
T  1167605 ttgtgtgtgattattcatcattggatgcattttcatgggtttccgtgttaga 1167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 21205780 - 21205729
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  21205780 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtattaga 21205729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 27181966 - 27182017
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| |||||||    
T  27181966 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccatgttaga 27182017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 3674745 - 3674692
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| | ||||| ||| ||||||||||||||||||||||||    
T  3674745 gcttgtgtgtgatcatttatcattgggtgcattttcatgggtttccgtgttaga 3674692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22662076 - 22662129
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  | ||||||||| ||||||||||||| ||||||||||    
T  22662076 gcttgtgtgtgattatcaatcattgagtgcattttcatgggttcccgtgttaga 22662129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 21222055 - 21222103
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||    
T  21222055 gcttgtgtgtgattattcatcattgggtgcattttcatgggttttcgtg 21222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 23467314 - 23467263
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    |||||||| |||| ||||| ||||| ||| ||||||||||||||||||||||    
T  23467314 gcttgtgtatgatcattcatcattgggtgcattttcatgggtttccgtgtta 23467263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 23515403 - 23515352
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| | ||||| ||| ||||||||| ||||||||||||||    
T  23515403 ttgtgtgtgattatttatcattgggtgcattttcatgagtttccgtgttaga 23515352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 23980901 - 23980952
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||  || ||||| ||||||||||||||||||    
T  23980901 ttgtgtgtgattattcatcattggatgcatttttatgggtttccgtgttaga 23980952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 25944050 - 25944101
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||  ||||||||||||||||||||||||    
T  25944050 ttgtgtgtgattaatcatcattgggtacattttcatgggtttccgtgttaga 25944101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 11336572 - 11336610
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatg 220  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  11336572 gcttgtgtgtgattattcatcattgagtgcattttcatg 11336610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 24182507 - 24182557
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| |||||  || ||||||||||||||| ||||||||    
T  24182507 tgtgtgtgattattcatcattggttgcattttcatgggtttctgtgttaga 24182557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 19349894 - 19349841
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| |||   ||||| ||| ||||||||||||||||||||||||    
T  19349894 gcttgtgtgtgatcattattcattgggtgcattttcatgggtttccgtgttaga 19349841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 23494767 - 23494714
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| || || ||||| ||| |||||||||||||| |||||||||    
T  23494767 gcttgtgtgtgatcatccatcattgggtggattttcatgggttttcgtgttaga 23494714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 24224792 - 24224840
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    ||||||||||||||||| | ||||| ||| |||||||||||||| ||||    
T  24224792 gcttgtgtgtgattatttatcattgggtgcattttcatgggttttcgtg 24224840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 40728492 - 40728636
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40728492 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 40728591  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  40728592 ggaaccacgctgcaacgaagcgcgattcatctgagggtcatgtgg 40728636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 55137125 - 55137269
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  55137125 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcattgaaaactttcagggtttgtatgaacggtcaatgaggat 55137224  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  55137225 ggaaccgcgctgcaacgaagcgcggttcatctgagggacatgtgg 55137269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 31093570 - 31093714
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    ||||||| ||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  31093570 ctcttctttcttctacaatcatggttttccatcgttggcctttcatagataagggcctcgttgaaaacattcagggtttgtatgaacgatcaatgaggat 31093669  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  31093670 ggaaccgcgctgtaacgaagcgcggttcatctgagggtcatgtgg 31093714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 33281549 - 33281693
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33281549 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtgaatgaggat 33281648  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  33281649 ggaaccgcgctgcaacgaagtgcggttcatctaagggtcatgtgg 33281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 35159184 - 35159328
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  35159184 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaataaggat 35159283  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  35159284 ggaaccgcgctgcaacgaagcgcgattcatctgagggtcatgtgg 35159328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 45462709 - 45462844
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45462709 cttctacaaccatggttttccatcgttggcctttcatagataagagcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaactgcg 45462808  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| |||||||||||||||||||||||||||||    
T  45462809 ctgcaatgaagcgcggttcatctgagggtcatgtgg 45462844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 40 - 174
Target Start/End: Complemental strand, 56463324 - 56463190
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  56463324 cttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacgggcaatgaggatggaaccgcg 56463225  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    ||||||||||| |||||||||||||||| ||||||    
T  56463224 ctgcaacgaagtgcggttcatctgagggacatgtg 56463190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 168180 - 168051
Alignment:
Q  46 caaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaa 145  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  168180 caaccatggttttctatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaa 168081  T
Q  146 cgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| || |||||||||||||||||||||    
T  168080 cgaagtgcagttcatctgagggtcatgtgg 168051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 4189567 - 4189411
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  4189567 ctcttcttccttctacaaccatggttttctatcgttggcctttcatagataagggcctcgttgaaaactttccgggtttatatgaacggtcaatgaggat 4189468  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtca-tgtggttcttagcttg 186  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  4189467 ggaaccgcgctgcaacgaagtgcggttcatctgtgggtcagtgtggttcttagcttg 4189411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 16024345 - 16024473
Alignment:
Q  47 aaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaac 146  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16024345 aaccatggttttccatcgttggcctttcatagataagggcatcgttgaaaactttcagggtttgtatgaacagtcaatgaggatggaaccgcgctgcaac 16024444  T
Q  147 gaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| |||||||||||||||||    
T  16024445 gaagcgcggtttatctgagggtcatgtgg 16024473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 2013389 - 2013245
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    ||||||| ||||| |||||||||| |||||| | |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  2013389 ctcttctttcttctacaaccatggatttccatcgttggcctttcatagataagggcttcattgaaaactttcagggtttgtatgaacgatcaatgaggat 2013290  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  2013289 ggaaccgcgctgcaacgaagtgaggttcatctgagggtcatgtgg 2013245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 9035764 - 9035632
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9035764 cttctacaaccatggttttcgatcattggcctttcatagataagggccttgttgaaaactttcagggtttgtatgaacgatcaatgaggatggaaccgcg 9035665  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatg 172  Q
    ||||||||||||||||||||| |||||||||||    
T  9035664 ctgcaacgaagcgcggttcatttgagggtcatg 9035632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 15542505 - 15542361
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15542505 ctcttcttccttctacaaccatggttttccatcgttggcctttcatcgataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 15542406  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  15542405 ggaaccgtgctgcaacgaagtgcggttcatttgagggtcatgtgg 15542361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 35319552 - 35319408
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35319552 ctcttcttccttctacaactatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttttatgaacggtcaatgaggat 35319453  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||    
T  35319452 ggaaccgcgctacaatgaagtgcggttcatctgagggtcatgtgg 35319408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 4048606 - 4048741
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  4048606 cttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcaggatttgtatgaacggtcaatgaggatggagccgcg 4048705  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||||||||| || |||||||||||    
T  4048706 ctgcaacgaagtgcggttcatttgcgggtcatgtgg 4048741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 45229546 - 45229676
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  45229546 acaaccatggttttccatcgttggtctttcatagataagggtctcgttgaaaactttgagggtctgtatgaacggtcaatgaggatggaaccgcgctgca 45229645  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    || ||||||||||||||||||||||||||||    
T  45229646 acaaagcgcggttcatctgagggtcatgtgg 45229676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 52501886 - 52502016
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||    
T  52501886 acaaccatggttttccatcgttggcctttcatagataagggccttgttaaaaactttcagggtttgtatgaacggtcaattaggatgaaaccacgctgca 52501985  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||    
T  52501986 acgaagcgcggttcatctgagggtcatgtgg 52502016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 6963938 - 6964081
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||| ||| | ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6963938 ctcttcttccttctacaaccatggtttaccatcattggc-tttcatggataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 6964036  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  6964037 ggaaccgcgctgcaacgaagtgcggttcatctgagagtcatgtgg 6964081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 28780446 - 28780302
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  28780446 ctcttcttccttctacaaccatgattttccatagttggcctttcatagataagggtttcgttgaaaactttcagggtttgcatgaacggtcaatgaggat 28780347  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  28780346 ggaaccgcgatgcaacgaagcgcggttcatctgagggtcatgtgg 28780302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 45925055 - 45925199
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||    
T  45925055 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatcaagat 45925154  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| ||||||||||||| || |||||||||||||||||||||    
T  45925155 ggaaccacgctgcaacgaagtgcagttcatctgagggtcatgtgg 45925199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 52416593 - 52416464
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    |||||||||||||| || | ||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52416593 acaaccatggtttttcatcgttggcctttcatagataagggtcttgttaaaaactttcagggtttgtatgaacggtcaatgatgatggaaccgcgctgca 52416494  T
Q  145 acgaagcgcggttcatctgagggtcatgtg 174  Q
    |||||||||||||||||||| |||||||||    
T  52416493 acgaagcgcggttcatctgatggtcatgtg 52416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 28310550 - 28310415
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28310550 cttctacaaccatggttttcaatcgttggcctttcatagataagggcatcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggtaccgcg 28310451  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| |||| | ||||||| ||||||||||||||    
T  28310450 ctgcaaagaagtgtggttcatttgagggtcatgtgg 28310415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 38217932 - 38217793
Alignment:
Q  48 accatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacg 147  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  38217932 accatggttttccattgttggcctttcatagataagggtctcgttgaaattttttagggtttgtatgaacggtcaatgaggatggaaccgcgctgctacg 38217833  T
Q  148 aagcgcggttcatctgagggtca-tgtggttcttagcttg 186  Q
    ||| ||||||||||||||||||| ||||||||||||||||    
T  38217832 aagtgcggttcatctgagggtcagtgtggttcttagcttg 38217793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 16452414 - 16452557
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16452414 ctcttcttccttctacaaccatggttttccatcgttggcctttcataaataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 16452513  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||  | |||||||||||| ||||||||||| ||||||||||||    
T  16452514 ggaattgtgctgcaacgaagtgcggttcatct-agggtcatgtgg 16452557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 49374779 - 49374923
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | |||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||||    
T  49374779 ctcttcttccttctacaaccatggtttttcatcgttggcctttcatagataagggccttgttgaaaaatttcagggtttgtataaatggtcaatgaggat 49374878  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||    
T  49374879 ggaactgcgctgcaacgaagtgcggttcatctgagggtcacgtgg 49374923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 51539080 - 51539224
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||| |||| | |||||| |||||||| | ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  51539080 ctcttctaccttcaataaccatagttttccatcgttgacctttcatatataagggtctcgttgaaaactttcagggtttgtatgaacggtcaacgaggat 51539179  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  51539180 ggaaccgcgctgcaacgaagggcggttcatttgagggtcacgtgg 51539224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 30004029 - 30004164
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||||||| || | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30004029 cttctacaaccatggtttttcatcgttggcctttcatagataagagcctcgttgaaaacttttagggtttgtatgaacggtcaatgaggatggaaccgcg 30004128  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||| |||  || ||||| ||||||||||||||    
T  30004129 ctgcaacaaagtacgattcatatgagggtcatgtgg 30004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 38550938 - 38550803
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||| || | |||||||||||| |||||||||||||||||||    
T  38550938 cttctacaaccatggttttcgatcgttggcctttcataaataagggcctcgttgaaaacttttagaggttgtatgaacggccaatgaggatggaaccgcg 38550839  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| |||||||||||| |||||||||||    
T  38550838 ctgcaacgaagtgcggttcatctgggggtcatgtgg 38550803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 1603248 - 1603392
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  1603248 ctcttcttccttctacaaccatggttttccttcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgatgat 1603347  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||| ||||||||||| |||| |  ||||||||| |||||||||||    
T  1603348 ggatccgcgctgcaaagaagtgatgttcatctgggggtcatgtgg 1603392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 43841579 - 43841469
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43841579 ctcttcttccttctacaaccatggttttccatcgttgacctttcatggataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 43841480  T
Q  131 ggaaccgcgct 141  Q
    |||||||||||    
T  43841479 ggaaccgcgct 43841469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 5419381 - 5419456
Alignment:
Q  99 tttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||  ||| | ||||||||| |||||||||||    
T  5419381 tttcagggtttgtatgaacggtcaacgaggatggaatcacgctgcaataaagtgtggttcatctaagggtcatgtg 5419456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 8871842 - 8871892
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  8871842 gcttgtgtgtgattattcatcattgagtgcattttcatgggtttccgtgtt 8871892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 52264904 - 52264957
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  52264904 gcttgtgtgtgattattcatcattgagtgcatttttatgggtttccgtgttaga 52264957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 12836595 - 12836646
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  12836595 ttgtgtgtgattattcttcattgagtgcattttcatgggtttccgtgttaga 12836646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 13808899 - 13808950
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  13808899 gcttgtgtgtgatcattcatcattgggtgtattttcatgggtttccgtgtta 13808950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 54117659 - 54117710
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  54117659 ttgtgtgtgattattcttcattgagtgcattttcatgggtttccgtgttaga 54117710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 44347700 - 44347650
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  44347700 gcttgtgtgtgattattcatcattgagtgcattttcatgtgtttccgtgtt 44347650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13247291 - 13247238
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  13247291 gcttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 13247238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 13722466 - 13722519
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||    
T  13722466 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttctgtgttaga 13722519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 15045687 - 15045634
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  15045687 gcttgtgtgtgaatattcatcattgggtgcattttcatgggtttccgtgttaga 15045634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 15108737 - 15108790
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  15108737 gcttgtgtgtgaatattcatcattgggtgcattttcatgggtttccgtgttaga 15108790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 55375976 - 55376029
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  55375976 gcttgtgtgtgaatattcatcattgggtgcattttcatgggtttccgtgttaga 55376029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 9296359 - 9296308
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  9296359 ttgtgtgtgattattcattattgggtgcattttcatgggtttccgtgttaga 9296308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 53704125 - 53704176
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||    
T  53704125 ttgtgtgtgattattcatcattgggtgcattctcatgggtttccgtgttaga 53704176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 23269303 - 23269356
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||||||    
T  23269303 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttctgtgttaga 23269356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 30231891 - 30231944
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||| |||||||||    
T  30231891 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttgcgtgttaga 30231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 9290485 - 9290437
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  9290485 tgtgtgattattcattattgggtgcattttcatgggtttccgtgttaga 9290437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 25118578 - 25118626
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  25118578 tgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 25118626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 122737 - 122690
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgt 231  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||    
T  122737 ttgtgtgtgattattcatcattgggtgcattttcatgggttttcgtgt 122690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 20812917 - 20812968
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    ||||||||||||||||||| ||||| ||| |||||| |||||||| ||||||    
T  20812917 gcttgtgtgtgattattcatcattgggtgcattttcgtgggtttctgtgtta 20812968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 44056791 - 44056741
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||| |||||||||||||||    
T  44056791 ttgtgtgtgattattcatcattgggtgcattttcat-ggtttccgtgttaga 44056741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 53907109 - 53907160
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||| ||||||||    
T  53907109 ttgtgtgtgattattcatcattgggtgcatttccatgggtttctgtgttaga 53907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 16733050 - 16733000
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||| |||| |||||||| ||||| ||| |||||||||||||||||||||    
T  16733050 gcttgcgtgtaattattcatcattgggtgcattttcatgggtttccgtgtt 16733000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 37956415 - 37956469
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    ||||||||||||| ||||| ||| | ||  |||||||||||||||||||||||||    
T  37956415 gcttgtgtgtgatcattcatcatggggtacattttcatgggtttccgtgttagag 37956469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 41165442 - 41165496
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||| |||| |||||    
T  41165442 gcttgtgtgtgaatattcatcattgggtgcattttcatgggttttcgtgctagag 41165496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 13438450 - 13438503
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||||||||| ||||| |||| ||| |||||||||    
T  13438450 gcttgtgtgtgattatttatcattgagtgcattttaatggattttcgtgttaga 13438503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 16523653 - 16523608
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgt 229  Q
    ||||||||||||| ||| ||||| |||||||||||||| |||||||    
T  16523653 ttgtgtgtgattaatcatcattgggtgtattttcatggatttccgt 16523608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 47534445 - 47534498
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||| || ||||||    
T  47534445 gcttgtgtgtgattatttatcattgggtgtattttcatgagttttcgcgttaga 47534498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 20754504 - 20754583
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatg 125  Q
    ||||| ||| ||||||| | ||||||||| ||||| |  || ||| ||||||| |||||||| ||||||||||||||||||    
T  20754504 acaacaatgtttttccatccttggcctttaatagaaagaggtctctttgaaaa-tttcagggattgtatgaacggtcaatg 20754583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 15912183 - 15912318
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15912183 cttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaactgcg 15912282  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15912283 ctgcaacaaagcgcggttcatctgagggtcatgtgg 15912318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 38208804 - 38208939
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  38208804 cttctacaaccatggttttccatcgttggtctttcatagataagggtctcgttgaaaacttttagggtttgtatgaacggtcaataaggatggaaccgcg 38208903  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  38208904 ctgcaacgaagcgcggttcatctgagggtcatgtgg 38208939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 45234701 - 45234835
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||||||| || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45234701 cttctacaaccatggtttttcatcgttggcctttcatagataagggcttcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccacg 45234800  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    ||||||| |||||||||||||||||||||||||||    
T  45234801 ctgcaacaaagcgcggttcatctgagggtcatgtg 45234835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 38703259 - 38703115
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  38703259 ctcttcttccttctacaaccatggtttttcatcattggcctttcatagataagggtctcgttgaaaactttcaggatttgtatgaacggttaatgaggat 38703160  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  38703159 ggaaccgcgctgcaacgaagcgcggttcatctgaaggtcatgtgg 38703115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 45117538 - 45117686
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggttt----gtatgaacggtcaatga 126  Q
    |||||||  |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  45117538 ctcttcttccttctacaaccatggttttccatcattggcctttcatagataagggcctcgttgaaaactttcagggtttgtacgtatgaacggtcaatga 45117637  T
Q  127 ggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45117638 ggatggaaccgcgctgcaacgaagtgcggttcatttgagggtcatgtgg 45117686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 1209589 - 1209445
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  1209589 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcaaggtttgtatgaacggtaaatgaggat 1209490  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||| ||| ||||||||| || |||||||||||    
T  1209489 ggaaccgcgctgcaacaaagtgcggttcatttgtgggtcatgtgg 1209445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 17137376 - 17137232
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  17137376 ctcttcttccttctacaaccatggttttccatcgttggtctttcatagataagggtctcgttgaaaactttcagggtttatatgaacagtcaatgaggat 17137277  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  17137276 ggaaccgcgttgcaacgaagcgcagttcatctgagggtcatgtgg 17137232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 44760519 - 44760654
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44760519 cttctacaaccatggttttccatcgttggtctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 44760618  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| | ||  || |||||||||||||||||||||    
T  44760619 ctgcagcaaattgcagttcatctgagggtcatgtgg 44760654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 1115567 - 1115711
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||| ||||||||||||| |  || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1115567 ctcttcttccttctacatccatggttttccatcgctgacctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 1115666  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
     ||||||||||||||||||| ||| ||||||||||||||||||||    
T  1115667 agaaccgcgctgcaacgaagtgcgattcatctgagggtcatgtgg 1115711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 7941202 - 7941062
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  7941202 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttaagggcttgtatgaacggtcaatgaggat 7941103  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcat 171  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  7941102 ggaaccgcgctgcaacgaagtgcgattcatctgggggtcat 7941062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 17309424 - 17309542
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17309424 ctcttcttccttctacaaccatggttttccatcgttggtctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 17309523  T
Q  131 ggaaccgcgctgcaacgaa 149  Q
    |||||||||||||||||||    
T  17309524 ggaaccgcgctgcaacgaa 17309542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 6404578 - 6404722
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  6404578 ctcttcttccttctacagccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcaaggtttgtatgaacggtcaatgaagat 6404677  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||| ||||||||| |||| ||| ||||||||| | ||||||||    
T  6404678 ggaactgcgctgcaatgaagtgcgattcatctgaagatcatgtgg 6404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 31993750 - 31993608
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  31993750 ctcttcttccttctacaaccatggtttttcatcgttggcctttcatggataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaaaat 31993651  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    |||||||||||||| | ||| ||||||||| || ||||||||||    
T  31993650 ggaaccgcgctgcaccaaagtgcggttcatatg-gggtcatgtg 31993608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 30490362 - 30490298
Alignment:
Q  111 tatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30490362 tatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 30490298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 16414979 - 16415105
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||  |||||| | ||||||||||||||| |  ||| || ||| ||| ||||| || |||||||||||||||||| |||||||||||||    
T  16414979 cttctacaaccatgtgtttccatcgttggcctttcatagaaagaggcatctttggaaattttcaaggattgtatgaacggtcaatggggatggaaccgcg 16415078  T
Q  140 ctgcaacgaagcgcggttcatctgagg 166  Q
    |||||| |||| |||||||||||||||    
T  16415079 ctgcaaagaagggcggttcatctgagg 16415105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 16251839 - 16251722
Alignment:
Q  56 tttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaagcgcgg 155  Q
    |||||| | ||||||||||||||| |  ||| || ||| ||| ||||| || |||||||||||||||||| | ||||||||||||||||| |||| ||||    
T  16251839 tttccatcgttggcctttcatagaaagaggcatctttggaaattttcaaggattgtatgaacggtcaatgggaatggaaccgcgctgcaaagaagtgcgg 16251740  T
Q  156 ttcatctgagggtcatgt 173  Q
    |||||||  |||||||||    
T  16251739 ttcatctaggggtcatgt 16251722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 13279165 - 13279294
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||         ||||| |||||||        
T  13279165 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagat--gggcctcgttgaaaactttcag---------gaacgatcaatga---- 13279249  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||| || |||||||||| | ||||||||||||||||||||||||    
T  13279250 ggaatcgtgctgcaacgatgtgcggttcatctgagggtcatgtgg 13279294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 42535482 - 42535431
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  42535482 ttgtgtgtgattattcatcattgagtgcattttcatgggtttccgtgttaga 42535431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 723247 - 723194
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  723247 gcttgtgtgtgattaatcatcattgagtgcattttcatgggtttccgtgttaga 723194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 18965418 - 18965528
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||  |||||| | ||||  ||||||||| |  |||||| ||| ||| |||||||| ||||||||||  |||||| |||||||||||||    
T  18965418 cttctacaaccatgtgtttccatcgttggtttttcatagaaagaggcctctttggaaattttcagggattgtatgaacaatcaatggggatggaaccgcg 18965517  T
Q  140 ctgcaacgaag 150  Q
    |||||| ||||    
T  18965518 ctgcaaagaag 18965528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19794121 - 19794171
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  19794121 tgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 19794171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 25602907 - 25602855
Alignment:
Q  183 cttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||    
T  25602907 cttgtgtgtgattattcatcattgggtgcattttcatgggttcccgtgttaga 25602855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 463565 - 463514
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||    
T  463565 ttgtgtgtgattattcatcattgggtgcaatttcatgggtttccgtgttaga 463514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 9652294 - 9652345
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  9652294 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 9652345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 22863771 - 22863720
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||    
T  22863771 ttgtgtgtgattattcatcattgggtgcattttcgtgggtttccgtgttaga 22863720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 68852 - 68799
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||||||    
T  68852 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttctgtgttaga 68799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 19433197 - 19433250
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| |||||  || ||||||||||||||||||||||||    
T  19433197 gcttgtgtgtgatcattcatcattggatgcattttcatgggtttccgtgttaga 19433250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 23836079 - 23836132
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| |||||  || |||||||||||||| |||||||||    
T  23836079 gcttgtgtgtgattattcatcattggatgcattttcatgggtttacgtgttaga 23836132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 2664 - 2708
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttc 226  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  2664 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttc 2708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 2155247 - 2155295
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    |||||||||||| |||||| ||||||||| |||||||||||||| ||||    
T  2155247 gcttgtgtgtgaatattcatcattgagtgcattttcatgggttttcgtg 2155295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 7322389 - 7322345
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttc 226  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  7322389 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttc 7322345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 8892052 - 8892001
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||| ||||| |||||||||    
T  8892052 ttgtgtgtgattattcatcattgggtgcattttcataggttttcgtgttaga 8892001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 36890056 - 36890107
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||| |||||||||| ||||| ||| |||||||||||||||| |||||||    
T  36890056 ttgtgtatgattattcatcattgggtgcattttcatgggtttccatgttaga 36890107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 36981870 - 36981921
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||  || ||||||| ||||||||||||||||    
T  36981870 ttgtgtgtgattattcatcattggatgcattttcacgggtttccgtgttaga 36981921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 43642371 - 43642422
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||  ||||||||    
T  43642371 ttgtgtgtgattattcatcattgggtgcattttcatgggtttatgtgttaga 43642422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16446607 - 16446554
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||| | ||||| ||| |||||||||||||| |||||||||    
T  16446607 gcttgtgtgtgaatatttatcattgtgtgcattttcatgggttttcgtgttaga 16446554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22579269 - 22579322
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| || ||||| |||||  || ||||||||||||||||||||||||    
T  22579269 gcttgtgtgtaatcattcatcattggatgcattttcatgggtttccgtgttaga 22579322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22762735 - 22762788
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||| ||||||| ||| ||||| ||| |||||||||||||| |||||||||    
T  22762735 gcttgtgcgtgattaatcatcattgggtgcattttcatgggttttcgtgttaga 22762788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 23821172 - 23821225
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||| |||||||||| ||| ||||| ||| ||||||||||| ||||||||||||    
T  23821172 gcttatgtgtgattaatcatcattgggtgcattttcatgggattccgtgttaga 23821225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 23830251 - 23830304
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||| |||||||||| ||| ||||| ||| ||||||||||| ||||||||||||    
T  23830251 gcttatgtgtgattaatcatcattgggtgcattttcatgggattccgtgttaga 23830304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 32466727 - 32466674
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||| ||||||||||| ||| | ||| |||||||| |||||||||||||||    
T  32466727 gcttgtgcgtgattattcatcatggggtgcattttcataggtttccgtgttaga 32466674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 45536847 - 45536932
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatg 125  Q
    |||| ||||||||||||||||| |   | ||||||||||| |  |||||| ||||||| |||||||| || |||||| ||||||||    
T  45536847 cttctacaaccatggttttccatcaccgacctttcatagaaacaggcctctttgaaaattttcagggattttatgaatggtcaatg 45536932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 24293906 - 24293953
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  24293906 tgtgtgattattcatcattgggtgcattttcatggg-ttccgtgttaga 24293953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 25875311 - 25875359
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| | ||| ||| ||||||||| ||||||||||||||    
T  25875311 tgtgtgattattcatcgttgggtgcattttcatgagtttccgtgttaga 25875359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 16395798 - 16395928
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16395798 acaactatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaacgcgctgca 16395897  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||    
T  16395898 acgaagcgcggttcatctgagggtcatgtgg 16395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 31722567 - 31722423
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31722567 ctcttcttccttctacaaccatggttttccaccgttggcctttcatagatgtgggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 31722468  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  31722467 ggaacctcgctgcaacgaagcgcggttcatttgagggtcatgtgg 31722423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 439488 - 439622
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  439488 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagacaagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 439587  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgag 165  Q
    | |||||||||||||||||||||||||||||||||    
T  439588 gaaaccgcgctgcaacgaagcgcggttcatctgag 439622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 11975449 - 11975593
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  11975449 ctcttcttccttctacaaccatggttttacatcgttggactttcatagataagggcctcgttgaaaactttcagggtttgtattaaaggtcaatgaggat 11975548  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  11975549 ggaaccgcgctacaacgaagcgcagttcatctgagggtcatgtgg 11975593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 304220 - 304364
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  304220 ctcttcttccttctacaaccatggttttccatcgttgtcctttcatagacaagggcctcgttgaaaacttccagggtttgtatgaacagtcaatgaggat 304319  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||    
T  304320 ggaaccgcgttgcaacgaagcgcggtttatctaagggtcatgtgg 304364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 31318982 - 31319111
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  31318982 ctcttcttccttctacaaccatggttttccatcgttgacctttcatagataagggcctcgttgaaaactttcaggatttgtatgaacggtcaatgcggat 31319081  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcat 160  Q
    |||||||||||| ||| |||||||||||||    
T  31319082 ggaaccgcgctgtaacaaagcgcggttcat 31319111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 9304620 - 9304486
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||||||| || | |||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||| |     
T  9304620 cttctacaaccatggtttttcatcgttggtctttcatagataaaggcctcgttgaaaactttcagggtttgtatgaacagtcaatgatgatgaaaccac- 9304522  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
     | |||||||| ||||||||||| ||||||| ||||    
T  9304521 atacaacgaagtgcggttcatctaagggtcacgtgg 9304486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 31271813 - 31271896
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatg 114  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31271813 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatg 31271896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16086839 - 16086789
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  16086839 tgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 16086789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 18399817 - 18399767
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||||||||||    
T  18399817 tgtgtgtgattattcatcattgagagcattttcacgggtttccgtgttaga 18399767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 18571161 - 18571111
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||||    
T  18571161 gcttgtgtgtgataattcatcattgggtgcattttcatgggtttccgtgtt 18571111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 18778007 - 18777957
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||||||| ||||||||||    
T  18778007 gcttgtgtgtgattattcatcattgggtgcattttcatggatttccgtgtt 18777957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 25743859 - 25743912
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||| |||||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  25743859 gcttatgtgtgattattcatcattgggtgcattttcatgggtttccgtattaga 25743912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 19982687 - 19982735
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||  ||| ||||||||| ||||||||||||||||||||||||    
T  19982687 tgtgtgattgatcatcattgagtgcattttcatgggtttccgtgttaga 19982735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 21624000 - 21623956
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttc 226  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  21624000 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttc 21623956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 25633110 - 25633158
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||| ||||||| ||||| ||| ||||||||||||||||||||||||    
T  25633110 tgtgtggttattcatcattgggtgcattttcatgggtttccgtgttaga 25633158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 13014093 - 13014144
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| || ||||| ||| |||||||||||||||| |||||||    
T  13014093 ttgtgtgtgattatccatcattgggtgcattttcatgggtttccatgttaga 13014144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 18584182 - 18584131
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||| |||||||| ||||| ||| ||||||||||||| ||||||||||    
T  18584182 ttgtgtgttattattcatcattgggtgcattttcatgggttcccgtgttaga 18584131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16107338 - 16107288
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| ||||  ||| |||||||||||||| |||||||||    
T  16107338 tgtgtgtgattattcatcatttggtgcattttcatgggtttacgtgttaga 16107288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 31629066 - 31629016
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||| |||| |||||||| ||||| ||| |||||||||||||||||||||    
T  31629066 gcttgcgtgtaattattcatcattgggtgcattttcatgggtttccgtgtt 31629016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 13620208 - 13620257
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    ||||||||||||| ||| ||||| ||  ||||||||||||||||||||||    
T  13620208 ttgtgtgtgattaatcatcattgggtacattttcatgggtttccgtgtta 13620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 35008848 - 35008896
Alignment:
Q  186 gtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  35008848 gtgtgtgatt-ttcatcattgggtgcattttcatgggtttccgtgttaga 35008896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 35014550 - 35014598
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||| ||| ||||||||||||||| ||||||||    
T  35014550 tgtgtgattaatcatcattgggtgcattttcatgggtttctgtgttaga 35014598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 10508890 - 10508746
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10508890 ctcttcttccttctacaaccatggttttccatcattggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggccaatgaggat 10508791  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||    
T  10508790 ggaaccgcgttgcaacgaagcgcggttcatcttagggtcatgtgg 10508746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 41182364 - 41182508
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41182364 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 41182463  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  41182464 ggaaccgcactgcaacgaagcacggttcatctgagggtcatgtgg 41182508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 36402488 - 36402353
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  36402488 cttctacaaccatggttttccatcgttggcctttcatagataagagcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaacttcg 36402389  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  36402388 ctgcaacgaagcgcggttcatctgagggtcatgtgg 36402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 40940216 - 40940360
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||| ||||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  40940216 ctcttcttccttctacaaccatgattttccatcgttggcctttcatagataagggtctggttgaaaactttcagggtttgtatgaacggtcagtgaggat 40940315  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40940316 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 40940360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 53816399 - 53816543
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  53816399 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcgttgaaaactttcagggtttatatgaacggtcaatgaagat 53816498  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  53816499 ggaaccgcgctgcaatgaagagcggttcatctgagggtcatgtgg 53816543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 32530269 - 32530413
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| |||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32530269 ctcttcttccttctacaaccatggtttttcatcgttgacctttcatagataagggcctcgttgaaaactttcagggtttgtataaacggtcaatgaggat 32530368  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
     ||||||||||||||||||| ||||||||||||||||||||||||    
T  32530369 agaaccgcgctgcaacgaagtgcggttcatctgagggtcatgtgg 32530413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 39587044 - 39587179
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39587044 cttctacaaccatggttttccatcgttggcctttcatagataaaggcatcgttgaaaactttcagggtttgtatgaatggtcaatgaggatggaaccgcg 39587143  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||||||| | ||||||||||||||||||||||    
T  39587144 ctgcaacgaagtgtggttcatctgagggtcatgtgg 39587179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 40 - 174
Target Start/End: Complemental strand, 26501864 - 26501730
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  26501864 cttctacaaccatggttttccatcgttggcttttcatagataagggtctcgttgaaaactttaagggtttgtatgaatggtcaatgaggatggaaccgcg 26501765  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtg 174  Q
    ||| |||||||||||||||||||||||||||||||    
T  26501764 ctgaaacgaagcgcggttcatctgagggtcatgtg 26501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 47647396 - 47647526
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||||||||||||||| | || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  47647396 acaaccatggttttccatcgtttgcctttcatagataaggacctcgttgaaaactttcaaggtttgtatgaacggtcaatgaggatggaaccacgctgca 47647495  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| ||||||||||||||||||||||||    
T  47647496 acgaagtgcggttcatctgagggtcatgtgg 47647526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 227838 - 227977
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataaggg-cctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgc 143  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  227838 acaaccatggttttccatcgttggcctttcatagataaggggccttgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgttgc 227937  T
Q  144 aacgaagcgcggttcatctgagggtc-atgtggttcttag 182  Q
    ||||||| |||||||||||| ||||| |||||||||||||    
T  227938 aacgaagtgcggttcatctgtgggtcaatgtggttcttag 227977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 39353603 - 39353738
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| ||||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39353603 cttctacaaccatggttttccatcgttgacctttcatagataagggcgtcgttgaaaactttcagggtttgtatgaacggtcaatgaggctggaaccgcg 39353702  T
Q  140 ctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    ||||||| ||| ||||||||| ||||||||||||||    
T  39353703 ctgcaactaagtgcggttcatttgagggtcatgtgg 39353738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 31764849 - 31764725
Alignment:
Q  51 atggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaacgaag 150  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  31764849 atggttttccatcgttggcctttcatagataagggtctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcactgcaaagaag 31764750  T
Q  151 cgcggttcatctgagggtcatgtgg 175  Q
     |||||||||||| |||||||||||    
T  31764749 tgcggttcatctgggggtcatgtgg 31764725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 41193420 - 41193276
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | |||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  41193420 ctcttcttccttctacaaccatggttttccatcgttggcctttcattgataagcgcgtcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 41193321  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||||| ||||||||| | || |||||||||||||||||||||    
T  41193320 ggaaccgcactgcaacgatgtgcagttcatctgagggtcatgtgg 41193276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 149780 - 149927
Alignment:
Q  40 cttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcg 139  Q
    |||| |||||||||| ||| || | |||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |    
T  149780 cttctacaaccatggattttcatcgttggcctttcgtagataagggcctcattgaaacctttcagggattgtatgaacggtcaatgaggatggaaccgtg 149879  T
Q  140 ctgcaacgaagcgcggttcatctgagggtca-tgtggttcttagcttg 186  Q
     |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  149880 ttgcaacaaagcgcggttcatctgagggtcagtgtggttcttagcttg 149927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 6936904 - 6937033
Alignment:
Q  45 acaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgca 144  Q
    ||||||||| ||||||  | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  6936904 acaaccatgtttttccgtcgttggcctttcatagataagggcctcattgaaaactttcaaggtttgtatgaacggtcaatgaggat-gaaccgcgctgca 6937002  T
Q  145 acgaagcgcggttcatctgagggtcatgtgg 175  Q
    |||||| ||||||||||| |||| |||||||    
T  6937003 acgaagtgcggttcatctaagggccatgtgg 6937033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 47013420 - 47013292
Alignment:
Q  47 aaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggatggaaccgcgctgcaac 146  Q
    ||||||||||||||| | |||||||||||||||||| || ||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||||    
T  47013420 aaccatggttttccatcgttggcctttcatagataaaggtctcgttgaaatttttcagggtttgtatgaacaatcaatgaggatggaaccgcgctgcaac 47013321  T
Q  147 gaagcgcggttcatctgagggtcatgtgg 175  Q
     || |||||||||||||||||| ||||||    
T  47013320 aaatcgcggttcatctgagggttatgtgg 47013292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 49165766 - 49165638
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  49165766 ctcttcttccttctacaaccatggttttccatcgttgacctttcgtagataagggcctcgttgaaaactttcagggtttgtatgaacgatcaatgatgat 49165667  T
Q  131 ggaaccgcgctgcaacgaagcgcggttca 159  Q
    |||||| ||||||||||||| | ||||||    
T  49165666 ggaaccacgctgcaacgaagtgaggttca 49165638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 17955392 - 17955445
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  17955392 gcttgtgtgtgattattcatcattgagtgtattttcatgggtttctgtgttaga 17955445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7854828 - 7854775
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  7854828 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 7854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 16181320 - 16181371
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  16181320 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 16181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 28559010 - 28558959
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  28559010 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 28558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 51960520 - 51960571
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  51960520 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 51960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12348680 - 12348733
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| |||||  || ||||||||||||||||||||||||    
T  12348680 gcttgtgtgtgattattcatcattggatgcattttcatgggtttccgtgttaga 12348733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16880990 - 16880937
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||    
T  16880990 gcttgtgtgtgattaatcatcattgagtgcattttcatgggttttcgtgttaga 16880937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 45582477 - 45582428
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  45582477 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgtta 45582428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 48422431 - 48422378
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||    
T  48422431 gcttgtgtgtgaatattcatcattgagtgcattttcatgggtttctgtgttaga 48422378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 15879197 - 15879153
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttc 226  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  15879197 gcttgtgtgtgattattcatcattgagtgcattttcatgggtttc 15879153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 316879 - 316930
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    |||||||| |||||||||| ||||| ||| ||||||||||||||||||||||    
T  316879 gcttgtgtttgattattcatcattgggtgcattttcatgggtttccgtgtta 316930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 2050658 - 2050607
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  2050658 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 2050607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 3578935 - 3578884
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||||||    
T  3578935 ttgtgtgtgattattcatcattgggtgcattttcatgggttttcgtgttaga 3578884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 13839737 - 13839686
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||| |||||||||| ||||| ||| ||||||||||||||||||||||||    
T  13839737 ttgtgtttgattattcatcattgggtgcattttcatgggtttccgtgttaga 13839686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 16995461 - 16995512
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||| |||||||||||||||    
T  16995461 ttgtgtgtgattattcatcattgggtgcattttcataggtttccgtgttaga 16995512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 17102210 - 17102159
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||    
T  17102210 ttgtgtgtgattattcatcattgggtgcattttaatgggtttccgtgttaga 17102159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 54037509 - 54037560
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  54037509 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 54037560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 12487166 - 12487216
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||||    
T  12487166 gcttgtgtgtgatcattcatcattgggtgaattttcatgggtttccgtgtt 12487216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14304920 - 14304870
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| |||||  || ||||||||||||||||||||||||    
T  14304920 tgtgtgtgattattcatcattggatgcattttcatgggtttccgtgttaga 14304870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 39657403 - 39657349
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    ||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||||||    
T  39657403 gcttgtgtgtgatcattcatcattgggtgcattttcatggatttccgtgttagag 39657349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 40940005 - 40939955
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||||    
T  40940005 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttccgtgtt 40939955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 12029583 - 12029632
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||    
T  12029583 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgtta 12029632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 38528602 - 38528549
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||||| |||||||||    
T  38528602 gcttgtgtgcgattattcatcattgggtgcattttcatgggttttcgtgttaga 38528549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 50111439 - 50111492
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| || ||||||    
T  50111439 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttacgagttaga 50111492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 3993412 - 3993364
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  3993412 tgtgtgattaatcatcattgtgtgcattttcatgggtttccgtgttaga 3993364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 13818386 - 13818338
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||||||    
T  13818386 ttgtgtgtgactattcatcattgggtgcattttcatgggtttccgtgtt 13818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 2845053 - 2845002
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||  ||| ||||||||||||||||||||||||    
T  2845053 ttgtgtgtgattaatcatcatttggtgcattttcatgggtttccgtgttaga 2845002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 5240118 - 5240165
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgt 231  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||||||    
T  5240118 ttgtgtgtgattattcatcattgggtgcattttcatgagtttccgtgt 5240165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 14285799 - 14285748
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||| |||||    
T  14285799 ttgtgtgtgattattcatcattgggtgcattttcatggatttccgtattaga 14285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 19232633 - 19232582
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||| ||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  19232633 ttgtgcgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 19232582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 19260241 - 19260288
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgt 231  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||    
T  19260241 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgt 19260288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 19947562 - 19947511
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| | |||||  || ||||||||||||||||||||||||    
T  19947562 ttgtgtgtgattatttatcattggatgcattttcatgggtttccgtgttaga 19947511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 55513735 - 55513692
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttcc 227  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||    
T  55513735 ttgtgtgtgattattcatcattgggtgcattttcatgggtttcc 55513692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 15856654 - 15856704
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttag 234  Q
    ||||||||||||||||| | ||| ||| |||||||||||||||| ||||||    
T  15856654 ttgtgtgtgattattcatctttgggtgcattttcatgggtttccatgttag 15856704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 14527447 - 14527500
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||| ||||||| ||| ||||| ||| |||||||||||||| |||||||||    
T  14527447 gcttgtgcgtgattaatcatcattgggtgcattttcatgggttttcgtgttaga 14527500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 17522256 - 17522309
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| |||||||| ||||| |||  ||||||||| |||||||||||||    
T  17522256 gcttgtgtgttattattcatcattgggtgccttttcatggatttccgtgttaga 17522309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 38810378 - 38810431
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||  ||| |||||||||||||||||| |||||    
T  38810378 gcttgtgtgtgatcattcatcatttggtgcattttcatgggtttccgtattaga 38810431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 41662395 - 41662342
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | | ||| ||| |||||||||||||| |||||||||    
T  41662395 gcttgtgtgtgattatttatctttgggtgcattttcatgggttttcgtgttaga 41662342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 47784128 - 47784181
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||  |||||| ||||| ||| |||||||||||||| |||||||||    
T  47784128 gcttgtgtgtggctattcatcattgggtgcattttcatgggttttcgtgttaga 47784181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 2448702 - 2448750
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||||||| |||||||||||||| ||| |||||    
T  2448702 tgtgtgattaatcatcattgagtgcattttcatgggttttcgtattaga 2448750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 17192368 - 17192316
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    ||||||||||||| | | ||||||||| |||||||||||||| |||| |||||    
T  17192368 ttgtgtgtgattaattatcattgagtgcattttcatgggttttcgtgctagag 17192316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 19570067 - 19570111
Alignment:
Q  188 gtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    |||||| |||||| ||||| ||| |||||||||||||||||||||    
T  19570067 gtgtgactattcatcattgggtgcattttcatgggtttccgtgtt 19570111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 33342738 - 33342690
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||| ||| ||||||||| ||||||||||||||    
T  33342738 tgtgtgattaatcatcattgggtgcattttcatgagtttccgtgttaga 33342690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 47105 - 46976
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  47105 ctcttcttccttctacaaccatggttttccatctttgacctttcatagataagggtctcgttgaaaactttcaaggtttgtatgaacggtcaatgaggat 47006  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcat 160  Q
    |||||||| |||||| |||| |||||||||    
T  47005 ggaaccgcactgcaaagaagtgcggttcat 46976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 14830 - 14688
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaatgaggat 130  Q
    |||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  14830 ctcttcttccttctacaaccatggttttccatcgttggcctttcatagataagggcctcattgaaaacttttagggtttgtatgaacgatcaatgaggat 14731  T
Q  131 ggaaccgcgctgcaacgaagcgcggttcatctgagggtcatgt 173  Q
    | |||||  ||||||||||| |||||||||||  |||||||||    
T  14730 gaaaccgtactgcaacgaagtgcggttcatctaggggtcatgt 14688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 30961 - 30908
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  30961 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 30908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 108834 - 108887
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  108834 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 108887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 117335 - 117388
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  117335 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 117388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 407 - 356
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  407 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 2226 - 2175
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  2226 ttgtgtgtgattattcatcattgagtgcatttccatgggtttccgtgttaga 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 5157 - 5106
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  5157 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 5106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 373 - 420
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgt 231  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  373 ttgtgtgtgattattcatcattgggtgtattttcatgggtttccgtgt 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 4575 - 4626
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  4575 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 4626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 2436 - 2486
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  2436 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgtt 2486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 367 - 313
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    |||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||    
T  367 gcttgtgtctgatcattcatcattgggtgtattttcatgggtttccgtgttagag 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 5434 - 5384
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  5434 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgtt 5384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 10048 - 9998
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  10048 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgtt 9998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 8043 - 7993
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  8043 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgtt 7993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 92533 - 92483
Alignment:
Q  185 tgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  92533 tgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 92483  T

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Target: scaffold1867 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 1020 - 967
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  1020 gcttgtgtgtgattattcatcatttggtgcattttcatgggtttccgtgttaga 967  T

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Target: scaffold0673 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 6217 - 6270
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||    
T  6217 gcttgtgtgtaattattcatcattgggtgcattttcatgggtttccgtgttaga 6270  T

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Target: scaffold0673; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 208 - 258
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||||||| |||||||||||||||    
T  208 ttgtgtgtgattattcatcattgggtgcattttcat-ggtttccgtgttaga 258  T

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Target: scaffold0537 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 773 - 720
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  773 gcttgtgtgtgattattcatcattgggtgcatttccatgggtttccgtgttaga 720  T

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Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1732 - 1785
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||| ||||||||| |||||||||||||| |||||||||    
T  1732 gcttgtgtgtgaatattcatcattgagtgcattttcatgggttttcgtgttaga 1785  T

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Target: scaffold0190 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 10815 - 10762
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||    
T  10815 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttccctgttaga 10762  T

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Target: scaffold0183 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 5060 - 5113
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  5060 gcttgtgtgtgattattcatcattaggtgcattttcatgggtttccgtgttaga 5113  T

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Target: scaffold0117 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 10938 - 10991
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||    
T  10938 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttctgtgttaga 10991  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 15710 - 15657
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||    
T  15710 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttctgtgttaga 15657  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 86211 - 86158
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  86211 gcttgtgtgtgattattcctcattgggtgcattttcatgggtttccgtgttaga 86158  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 160178 - 160125
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| | ||| ||| |||||||||||||| |||||||||    
T  160178 gcttgtgtgtgatcattcatcgttgggtgcattttcatgggttttcgtgttaga 160125  T

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Target: scaffold0162 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 12579 - 12531
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  12579 tgtgtgattattcatcattgggtgcattttcatgggtttccgtgttaga 12531  T

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Target: scaffold0162; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 25834 - 25885
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||  ||| |||||||||| |||||||||||||    
T  25834 ttgtgtgtgattattcatcatttggtgcattttcatggatttccgtgttaga 25885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 6442 - 6495
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||||| ||| ||||| |||||||| |||||||||    
T  6442 gcttgtgtgtgattatttatcattgggtgcattttaatgggttttcgtgttaga 6495  T

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Target: scaffold0162; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 7621 - 7661
Alignment:
Q  195 tattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||| ||||| ||| ||||||||||||||||||||||||    
T  7621 tattcatcattgggtgcattttcatgggtttccgtgttaga 7661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 12932 - 12880
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttag 234  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||    
T  12932 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttccgtgttag 12880  T

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Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16779 - 16726
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||||||    
T  16779 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttctgtgttaga 16726  T

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Target: scaffold0021; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 26310 - 26257
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||||||    
T  26310 gcttgtgtgtgatcattcatcattgggtgcattttcatgggtttctgtgttaga 26257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 131625 - 131668
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtg 230  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||    
T  131625 tgtgtgattattcatcattgggtgcattttcatgggtttccgtg 131668  T

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Target: scaffold1979 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 115 - 64
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  115 ttgtgtgtgattattcatcattgggtgcattttcatgggtttccgtgctaga 64  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 5570 - 5519
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  5570 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 21034 - 20983
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| |||||  || ||||||||||||||||||||||||    
T  21034 ttgtgtgtgattattcatcattggatgcattttcatgggtttccgtgttaga 20983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 11907 - 11958
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  11907 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 11958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 24097 - 24148
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  24097 ttgtgtgtgattattcatcattgggtgcatttccatgggtttccgtgttaga 24148  T

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Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 97687 - 97639
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||  || ||||| ||| ||||||||||||||||||||||||    
T  97687 tgtgtgattagccatcattgggtgcattttcatgggtttccgtgttaga 97639  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 80718 - 80667
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  80718 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 80667  T

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Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 41536 - 41485
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  41536 ttgtgcgtgattattcatcattgggtgcattttcatgggattccgtgttaga 41485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 107205 - 107256
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  107205 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 107256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 246862 - 246913
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  246862 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 246913  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 122581 - 122632
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||||||||    
T  122581 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgttaga 122632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 192888 - 192939
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  192888 ttgtgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 192939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 69995 - 70045
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  69995 ttgtgtgtgattattcatcattgggtgtattttcat-ggtttccgtgttaga 70045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 639 - 589
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||| | ||||| ||| |||||||||||||||||||||    
T  639 gcttgtgtgtgattatttatcattgggtgcattttcatgggtttccgtgtt 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 5790 - 5840
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  5790 gcttgtgtgtgattattcatcattgggtgcattttcctgggtttccgtgtt 5840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 9186 - 9140
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||    
T  9186 tgtgattattcatcattgggtgtattttcatgggtttccatgttaga 9140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 10725 - 10679
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||| |||||  ||||||||||||| |||||||||||||    
T  10725 tgtgattattcatcattggatgtattttcatggatttccgtgttaga 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 49000 - 48950
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| |||||    
T  49000 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttctgtgtt 48950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 62448 - 62398
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| |||||    
T  62448 gcttgtgtgtgattattcatcattgggtgcattttcatgggtttctgtgtt 62398  T

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Target: scaffold0396 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 11078 - 11131
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||||| |||||||||    
T  11078 gcttgtgtgtgattactcatcattgggtgcattttcatgggttttcgtgttaga 11131  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 35497 - 35589
Alignment:
Q  31 ctcttctatcttcgacaaccatggttttccagctttggcctttcatagataagggcctcgttgaaaactttcagggtttgtatgaacggtcaat 124  Q
    |||||| |||| | ||||| |||||||| || ||||||||||||||||| |   ||||| ||||||| |||||||| ||||||||| |||||||    
T  35497 ctcttccatctacaacaacaatggtttttcatctttggcctttcatagaaagatgcctctttgaaaa-tttcaggggttgtatgaatggtcaat 35589  T

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Target: scaffold0302 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 12955 - 12907
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  12955 tgtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 12907  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 19343 - 19391
Alignment:
Q  187 tgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||| ||||| ||  ||||||||||||||||||||||||    
T  19343 tgtgtgattattcatcattgggtacattttcatgggtttccgtgttaga 19391  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 165086 - 165038
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||||||||||||||| |||||| || ||||| |||||||||||||||    
T  165086 ttgtgtgtgattattcatcattgaatgcattttaatgggtttccgtgtt 165038  T

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Target: scaffold0686 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 5271 - 5318
Alignment:
Q  188 gtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  5271 gtgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 5318  T

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Target: scaffold0342 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 13148 - 13097
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    |||||||||||||  |||| ||||||||| |||||||||||||| |||||||    
T  13148 gcttgtgtgtgatcgttcatcattgagtgcattttcatgggttttcgtgtta 13097  T

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Target: scaffold0335 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 6861 - 6810
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||| |||||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  6861 ttgtatgtgattaatcatcattgggtgcattttcatgggtttccgtgttaga 6810  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 30669 - 30720
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||    
T  30669 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgctaga 30720  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 861 - 811
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  861 ttgtgtgtgattattcatcattgggtgcattt-catgggtttccgtgttaga 811  T

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Target: scaffold0132 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 43213 - 43162
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||    
T  43213 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgctaga 43162  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 42175 - 42124
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||    
T  42175 ttgtgtgtgattattcttcattgggtgcattttcatgggtttccgtgctaga 42124  T

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Target: scaffold0077 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 14880 - 14931
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| | ||| ||| |||||||||||||||||| |||||    
T  14880 ttgtgtgtgattattcatctttgggtgcattttcatgggtttccgtattaga 14931  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 39177 - 39126
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||| ||| ||||||| |||||| |||||||||    
T  39177 ttgtgtgtgattattcatcattgggtgcattttcaagggtttacgtgttaga 39126  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 89258 - 89309
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||| ||||||||| ||||| ||| |||| |||||||||    
T  89258 ttgtgtgtgattattcatcattgagtgcatttttatgagttttcgtgttaga 89309  T

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Target: scaffold1272 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 1112 - 1058
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    |||||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||    
T  1112 gcttgtgtgtgattgttcatcattgggtgcattttcatgggttttcgtgctagag 1058  T

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Target: scaffold0700 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 3329 - 3275
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttagag 236  Q
    ||||||||||||||||| | ||||| ||| |||||||||||||| |||| |||||    
T  3329 gcttgtgtgtgattatttatcattgtgtgcattttcatgggttttcgtgctagag 3275  T

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Target: scaffold0498 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 9718 - 9672
Alignment:
Q  189 tgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||  |||| ||| ||||||||||||||||||||||||    
T  9718 tgtgattattcataattgggtgcattttcatgggtttccgtgttaga 9672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 2182 - 2132
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtt 232  Q
    ||||| |||| |||||||| ||||| ||| |||||||||||||||||||||    
T  2182 gcttgcgtgtaattattcatcattgggtgcattttcatgggtttccgtgtt 2132  T

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Target: scaffold0682 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 7984 - 8029
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgt 229  Q
    ||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  7984 ttgtgtgtgattattcatcattgggtgcattttcatggatttccgt 8029  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9865 - 9812
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||||||  |||| ||| |||| |||||||||||| ||||||    
T  9865 gcttgtgtgtgattattcataattgggtgcatttccatgggtttccgcgttaga 9812  T

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Target: scaffold0234 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 16800 - 16848
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    ||||||||||||||||| ||||| ||| ||||||||||| ||||||||||    
T  16800 ttgtgtgtgattattcatcattgggtgcattttcatggg-ttccgtgtta 16848  T

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Target: scaffold0207 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 11513 - 11468
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgt 229  Q
    ||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  11513 ttgtgtgtgattattcatcattgggtgcattttcatggatttccgt 11468  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 22376 - 22324
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||| ||||| ||| |||||||| | |||||||||||||    
T  22376 gcttgtgtgtgattattcatcattgggtgcattttcat-gatttccgtgttaga 22324  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 56440 - 56391
Alignment:
Q  184 ttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgtta 233  Q
    |||||||||| |||||| ||||| ||| ||||| ||||||||||||||||    
T  56440 ttgtgtgtgactattcatcattgggtgcatttttatgggtttccgtgtta 56391  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 111913 - 111966
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    ||||||||||||||||||  ||||| ||| |||| |||||||| ||||||||||    
T  111913 gcttgtgtgtgattattcgtcattgggtgcatttccatgggttcccgtgttaga 111966  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 127593 - 127646
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||| |||||||||||| |||||  || |||||||||||||||||| |||||    
T  127593 gcttgtatgtgattattcatcattggatgcattttcatgggtttccgtattaga 127646  T

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Target: scaffold0150 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 29367 - 29323
Alignment:
Q  182 gcttgtgtgtgattattcagcattgagtgtattttcatgggtttc 226  Q
    ||||||||||||||||||| ||||| ||| |||||| ||||||||    
T  29367 gcttgtgtgtgattattcatcattgggtgcattttcttgggtttc 29323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 36304 - 36253
Alignment:
Q  183 cttgtgtgtgattattcagcattgagtgtattttcatgggtttccgtgttaga 235  Q
    |||||||||||||||| | ||||| ||| |||||||||||||| |||||||||    
T  36304 cttgtgtgtgattatttatcattgggtgcattttcatgggttt-cgtgttaga 36253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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