View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3628_low_52 (Length: 203)
Name: NF3628_low_52
Description: NF3628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3628_low_52 |
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Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 49160751 - 49160919
Alignment:
| Q |
15 |
aagcatagggagatgcacgtgattgagaagaagagagtctcgatgttgaggtggtgatggatgatttggatagagatggacggagggaggaacgtatcaa |
114 |
Q |
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| T |
49160751 |
aagcatagggagatgcacgtgattgagaagaagagagtctcgaggttgaggtggtgatggatgatttggatagagatggacggagggaggaacgtatcaa |
49160850 |
T |
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| Q |
115 |
agacgaaacgattctccgtgaagccatctttcaaagagagagaggtttgtgaagtgaagaagaagtaaa |
183 |
Q |
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| T |
49160851 |
agacgaaacgattctccgtgaagccatctttcaaagagagagaggtttgtgaagtgaagaagaagtaaa |
49160919 |
T |
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