View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3629_high_27 (Length: 249)
Name: NF3629_high_27
Description: NF3629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3629_high_27 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 36543039 - 36542800
Alignment:
| Q |
10 |
aagaatatcaagcattgtgaaaagccaaatatcacaaaaacaccatatacttagaaaactttcagtcactaaataatattattctcattcaaatggacaa |
109 |
Q |
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| T |
36543039 |
aagaatatcaagcattgtgaaaagccaaatatcacaaaaacaccatatacttagaaaactttcagacaataaataatattattctcattcaaatgtaaaa |
36542940 |
T |
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| Q |
110 |
ctctaatgccccaaccaacccgattgctttatagattttaaagtggagaatttgattaaggtgaaagcggtgggggcaaaattggtctatgagaagatga |
209 |
Q |
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| T |
36542939 |
ctctaatgccccaaccaacccgattgctttatagattttaaagtggagaatttgattaaggtgaaagcggtgggggcaaaattggtctatgagaagatga |
36542840 |
T |
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| Q |
210 |
tgttgttggattgattataggagaatattaaagtgagtga |
249 |
Q |
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| T |
36542839 |
tgttgttggattgattataggagaatattaaagtgagtga |
36542800 |
T |
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