View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3629_high_37 (Length: 208)

Name: NF3629_high_37
Description: NF3629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3629_high_37
NF3629_high_37
[»] chr5 (13 HSPs)
chr5 (12-186)||(30622713-30622886)
chr5 (12-118)||(17208074-17208180)
chr5 (12-118)||(32473388-32473494)
chr5 (30-118)||(41334675-41334763)
chr5 (30-118)||(7617133-7617221)
chr5 (33-118)||(38470579-38470664)
chr5 (30-118)||(2614661-2614749)
chr5 (30-118)||(22512305-22512393)
chr5 (30-116)||(5256997-5257083)
chr5 (30-118)||(18033982-18034070)
chr5 (30-118)||(33801469-33801557)
chr5 (46-118)||(33855071-33855143)
chr5 (61-116)||(25915030-25915085)
[»] chr7 (26 HSPs)
chr7 (12-118)||(31513287-31513393)
chr7 (12-118)||(40236919-40237025)
chr7 (12-117)||(31408627-31408732)
chr7 (12-118)||(33384870-33384977)
chr7 (12-118)||(27535225-27535331)
chr7 (30-116)||(10573751-10573837)
chr7 (33-118)||(5194246-5194331)
chr7 (30-118)||(35069721-35069809)
chr7 (19-116)||(4638200-4638297)
chr7 (33-118)||(43317443-43317528)
chr7 (30-118)||(24001024-24001112)
chr7 (30-118)||(42538443-42538531)
chr7 (19-118)||(9216302-9216400)
chr7 (19-118)||(24280597-24280696)
chr7 (30-118)||(41861674-41861764)
chr7 (51-118)||(39998408-39998475)
chr7 (19-118)||(42972852-42972951)
chr7 (30-116)||(43343636-43343722)
chr7 (30-116)||(44326180-44326266)
chr7 (30-116)||(44416946-44417032)
chr7 (30-115)||(26898414-26898499)
chr7 (30-118)||(5015395-5015483)
chr7 (30-118)||(5810936-5811024)
chr7 (33-118)||(45326020-45326105)
chr7 (30-109)||(32029829-32029908)
chr7 (30-116)||(16180369-16180454)
[»] chr3 (24 HSPs)
chr3 (12-118)||(10457886-10457992)
chr3 (12-118)||(25996268-25996374)
chr3 (12-118)||(9434124-9434230)
chr3 (12-118)||(4190259-4190365)
chr3 (13-118)||(52627972-52628077)
chr3 (12-118)||(34791829-34791935)
chr3 (12-118)||(51757593-51757699)
chr3 (18-118)||(42100688-42100788)
chr3 (30-118)||(46941053-46941141)
chr3 (30-118)||(45126940-45127028)
chr3 (30-118)||(40808865-40808953)
chr3 (30-117)||(54237097-54237184)
chr3 (19-116)||(27748565-27748662)
chr3 (30-118)||(24688414-24688502)
chr3 (30-118)||(25413681-25413769)
chr3 (30-118)||(36150130-36150218)
chr3 (30-118)||(47191038-47191125)
chr3 (18-118)||(53273684-53273784)
chr3 (30-118)||(54246160-54246248)
chr3 (30-117)||(40480750-40480837)
chr3 (30-117)||(42394431-42394518)
chr3 (19-69)||(51249357-51249407)
chr3 (24-114)||(29558240-29558330)
chr3 (30-116)||(53581870-53581956)
[»] chr1 (23 HSPs)
chr1 (12-118)||(38335918-38336024)
chr1 (12-118)||(48119628-48119734)
chr1 (12-118)||(35003294-35003400)
chr1 (12-118)||(44112677-44112783)
chr1 (12-118)||(46168383-46168489)
chr1 (12-118)||(38113189-38113295)
chr1 (12-118)||(45639726-45639832)
chr1 (12-118)||(35000107-35000213)
chr1 (12-118)||(41065153-41065259)
chr1 (12-118)||(45427739-45427845)
chr1 (12-118)||(26585462-26585568)
chr1 (12-118)||(45705825-45705931)
chr1 (30-118)||(37814778-37814866)
chr1 (30-118)||(43571098-43571186)
chr1 (30-118)||(23989535-23989624)
chr1 (61-118)||(14427347-14427404)
chr1 (30-118)||(5489776-5489864)
chr1 (30-116)||(2497574-2497660)
chr1 (30-118)||(48498974-48499062)
chr1 (30-118)||(750317-750405)
chr1 (30-116)||(4401329-4401416)
chr1 (30-71)||(4888090-4888131)
chr1 (46-118)||(24769527-24769599)
[»] chr4 (35 HSPs)
chr4 (12-118)||(17619146-17619252)
chr4 (12-118)||(711960-712066)
chr4 (12-118)||(55272370-55272476)
chr4 (13-116)||(3756242-3756344)
chr4 (12-118)||(32728357-32728463)
chr4 (12-118)||(46827700-46827806)
chr4 (12-116)||(35037007-35037111)
chr4 (12-118)||(48435573-48435679)
chr4 (12-116)||(38851515-38851619)
chr4 (19-118)||(28988473-28988572)
chr4 (12-118)||(960864-960970)
chr4 (30-118)||(33703141-33703229)
chr4 (38-118)||(49229684-49229764)
chr4 (19-118)||(1771267-1771366)
chr4 (30-117)||(41878407-41878494)
chr4 (30-118)||(27316725-27316813)
chr4 (30-118)||(27864564-27864652)
chr4 (30-118)||(55966358-55966446)
chr4 (31-118)||(28982835-28982922)
chr4 (30-116)||(27893854-27893940)
chr4 (28-118)||(48463460-48463550)
chr4 (30-118)||(35017733-35017820)
chr4 (19-118)||(41847971-41848070)
chr4 (30-116)||(43949813-43949900)
chr4 (12-81)||(19879991-19880060)
chr4 (33-118)||(25051693-25051778)
chr4 (12-118)||(36004110-36004204)
chr4 (30-118)||(23035980-23036068)
chr4 (30-118)||(27550309-27550397)
chr4 (30-116)||(39631102-39631189)
chr4 (30-116)||(43514698-43514784)
chr4 (19-116)||(41327544-41327641)
chr4 (30-118)||(45490325-45490413)
chr4 (33-118)||(12496956-12497041)
chr4 (20-68)||(56215899-56215947)
[»] chr2 (28 HSPs)
chr2 (12-118)||(12415454-12415560)
chr2 (12-118)||(12427514-12427620)
chr2 (12-118)||(43114557-43114663)
chr2 (12-118)||(966828-966934)
chr2 (12-118)||(18491705-18491811)
chr2 (12-116)||(11825648-11825752)
chr2 (12-116)||(41281968-41282072)
chr2 (12-118)||(16803968-16804074)
chr2 (12-118)||(16843250-16843356)
chr2 (12-116)||(4299414-4299518)
chr2 (12-118)||(34895735-34895841)
chr2 (12-94)||(4451944-4452026)
chr2 (19-117)||(34817777-34817875)
chr2 (30-118)||(30838632-30838720)
chr2 (12-118)||(14285676-14285782)
chr2 (33-116)||(6518484-6518566)
chr2 (19-118)||(13780736-13780835)
chr2 (30-118)||(1750414-1750502)
chr2 (30-118)||(4764738-4764826)
chr2 (30-118)||(16096747-16096835)
chr2 (30-118)||(12302265-12302353)
chr2 (12-100)||(12531657-12531744)
chr2 (30-117)||(19047158-19047245)
chr2 (32-118)||(43335777-43335863)
chr2 (46-116)||(33229303-33229374)
chr2 (30-116)||(43490413-43490499)
chr2 (33-116)||(8896598-8896681)
chr2 (32-118)||(42026767-42026855)
[»] chr8 (28 HSPs)
chr8 (12-118)||(35181516-35181622)
chr8 (12-118)||(16603620-16603726)
chr8 (12-118)||(34304788-34304894)
chr8 (12-117)||(16358827-16358933)
chr8 (12-118)||(18066712-18066818)
chr8 (12-116)||(33629987-33630091)
chr8 (32-118)||(1375542-1375628)
chr8 (30-116)||(42295197-42295283)
chr8 (12-118)||(19386559-19386670)
chr8 (30-118)||(11582766-11582854)
chr8 (30-118)||(29705362-29705450)
chr8 (30-118)||(36743495-36743583)
chr8 (30-116)||(29800962-29801048)
chr8 (12-118)||(10678146-10678240)
chr8 (30-118)||(2165975-2166063)
chr8 (30-116)||(20148762-20148848)
chr8 (30-116)||(26125637-26125723)
chr8 (30-116)||(42699259-42699345)
chr8 (31-116)||(30912575-30912660)
chr8 (30-118)||(5754903-5754991)
chr8 (30-118)||(30660754-30660842)
chr8 (30-110)||(31384672-31384752)
chr8 (30-118)||(42197447-42197535)
chr8 (30-117)||(45397317-45397404)
chr8 (30-118)||(2546996-2547084)
chr8 (19-118)||(40528635-40528735)
chr8 (19-68)||(32328818-32328867)
chr8 (82-118)||(28977146-28977182)
[»] chr6 (18 HSPs)
chr6 (12-118)||(33242403-33242509)
chr6 (12-116)||(27441544-27441648)
chr6 (19-118)||(3213400-3213499)
chr6 (18-118)||(33253913-33254013)
chr6 (12-118)||(31109216-31109322)
chr6 (33-118)||(7273350-7273435)
chr6 (30-118)||(26670021-26670109)
chr6 (30-118)||(13743233-13743321)
chr6 (30-118)||(13748733-13748821)
chr6 (30-118)||(21293689-21293777)
chr6 (30-116)||(24203999-24204085)
chr6 (30-118)||(7292747-7292835)
chr6 (30-118)||(7367549-7367637)
chr6 (30-118)||(9698345-9698433)
chr6 (30-118)||(26466799-26466887)
chr6 (19-118)||(30014343-30014442)
chr6 (30-118)||(21279929-21280017)
chr6 (33-116)||(30735984-30736067)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-116)||(45713-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (12-118)||(35450-35556)
[»] scaffold0119 (1 HSPs)
scaffold0119 (30-118)||(685-773)
[»] scaffold0385 (1 HSPs)
scaffold0385 (30-118)||(11251-11339)
[»] scaffold0038 (1 HSPs)
scaffold0038 (30-117)||(112656-112743)
[»] scaffold0187 (2 HSPs)
scaffold0187 (30-118)||(14200-14288)
scaffold0187 (30-118)||(24528-24616)
[»] scaffold0157 (1 HSPs)
scaffold0157 (33-118)||(23436-23521)


Alignment Details
Target: chr5 (Bit Score: 119; Significance: 5e-61; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 30622713 - 30622886
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||    
T  30622713 gagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaac 30622811  T
Q  112 attttccnnnnnnnnctaacaaaactatatatttgtcactgaaatacaatacaagtacatatattgttgttttcc 186  Q
    |||||||        ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  30622812 attttccttttttttctaacaaaactatgtgtttgtcactgaaatacaatacaagtacatatattgttgttttcc 30622886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 17208180 - 17208074
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  17208180 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaac 17208081  T
Q  112 attttcc 118  Q
    |||||||    
T  17208080 attttcc 17208074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 32473388 - 32473494
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  32473388 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaac 32473487  T
Q  112 attttcc 118  Q
    |||||||    
T  32473488 attttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 41334675 - 41334763
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| || ||| |||||||||| ||||||||||||||||||||||||||    
T  41334675 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 7617221 - 7617133
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| || |||   |||||||| ||||||||||||||||||||||||||    
T  7617221 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcc 7617133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 38470664 - 38470579
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||| || |||||||||||||||||||||| |||||||| ||||||    ||||||| ||||||||||| ||||||||||||||    
T  38470664 ttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcc 38470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 2614661 - 2614749
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  2614661 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 22512393 - 22512305
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||||| || ||||||   ||||| || ||||||||||||||||||||||||||    
T  22512393 tggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 5257083 - 5256997
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| |||| |||||| ||||||||||||    
T  5257083 tggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 18034070 - 18033982
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| ||| |||| ||||||   ||||| || ||||||||||||||||||||||||||    
T  18034070 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 33801557 - 33801469
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| ||||| || ||||||  ||||||  | |||||| |||||||||||||||||||    
T  33801557 tggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcc 33801469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 33855071 - 33855143
Alignment:
Q  46 ttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||| | | |||| |||||||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  33855071 ttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 25915030 - 25915085
Alignment:
Q  61 taatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||| ||| |||| |||||| ||||||| || ||||||||||||||||||||||||    
T  25915030 taatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 31513393 - 31513287
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  31513393 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaac 31513294  T
Q  112 attttcc 118  Q
    |||||||    
T  31513293 attttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 40237025 - 40236919
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  40237025 gagatgaaagagaaaatatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaac 40236926  T
Q  112 attttcc 118  Q
    |||||||    
T  40236925 attttcc 40236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 31408627 - 31408732
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||||||||||||||    
T  31408627 gagatgaaagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaac 31408726  T
Q  112 attttc 117  Q
    ||||||    
T  31408727 attttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 33384977 - 33384870
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaata-aggtgtatgattaaagggtgttcatgtaa 110  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||| ||| |||||||||| ||||||||||  |||||||||||||| | |||||||||||    
T  33384977 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaa 33384878  T
Q  111 cattttcc 118  Q
    ||||||||    
T  33384877 cattttcc 33384870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 27535225 - 27535331
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||| |||||||||| || |||||||||| || ||||  ||||| || |||||||  ||||||||||||||||||||||||||||    
T  27535225 gagatgaaagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaac 27535324  T
Q  112 attttcc 118  Q
    |||||||    
T  27535325 attttcc 27535331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 10573837 - 10573751
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| ||||||||||||||| | |||| |||||||| ||||||| | ||||||| ||||||||||| ||||||||||||    
T  10573837 tggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 5194246 - 5194331
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| |||||| ||||||||||||||  ||| |||| |||||| |||||||||| |||| |||||||||||||||||||||    
T  5194246 ttgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 35069809 - 35069721
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||| ||| |||||| ||||||| || ||||| ||||||||||||||||||||    
T  35069809 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 4638200 - 4638297
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||| ||| |||||||||||||| || |||||||||||||| ||||  ||||||| ||||||   |||||||| |||| |||||||||||||||||||    
T  4638200 aagataaagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 43317528 - 43317443
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| |||||| |||||||||| ||| |||| || | |||||| |||||||||| |||| |||||||||||||||||||||    
T  43317528 ttgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 43317443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 24001024 - 24001112
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  24001024 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 42538443 - 42538531
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  42538443 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 9216400 - 9216302
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| ||||| |||||||||||| || |||||||||||||  |||||||| |||| ||||||| | | || || ||||||||||||||||||||||||||    
T  9216400 aagataaaatgtggttgtgagatgaacttaccaaaatatctctaatgcat-gggtgtacaataggatataggaataaagggtgttcatgtaacattttcc 9216302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 24280597 - 24280696
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||| | || ||||||||| |||||||||||||||   || |||||||| | || |||| ||||||||| ||||||||||||| ||||||||||||    
T  24280597 aagagaaagtgtgattgtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcc 24280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 41861764 - 41861674
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatc-ct-taatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||||||||| ||||||||||||| || |||| ||| |||| || |||  ||||||||| ||||||||||||||||||||||||||    
T  41861764 tggttgtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcc 41861674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  51 aaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| |||| |||||||| ||||||| | ||||||||||||  ||||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 42972951 - 42972852
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| ||||| |||||||||||| || |||||||||||||| |||| |||| ||| ||||||   ||||| || |||||| |||||| ||||||||||||    
T  42972951 aagataaaatgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 43343636 - 43343722
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || ||| |||||||||| |||| |||||||| ||||||| ||||||  | |||| | |||||||||||||||||    
T  43343636 tggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 44326266 - 44326180
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| ||||  ||| ||| ||||||  | ||||||| ||||||||||| ||||||||||||    
T  44326266 tggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 44416946 - 44417032
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || ||| |||||||||| |||| |||||||| ||||||| ||||||  | |||| | |||||||||||||||||    
T  44416946 tggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 26898414 - 26898499
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattt 115  Q
    ||||||| |||| || |||||||||||||| |||| |||||  | ||||||  ||||||||| |||| ||||||||||||||||||    
T  26898414 tggttgtaagatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 5015483 - 5015395
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||| ||| ||||||   |||||  | ||||| ||||||||||||||||||||    
T  5015483 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 5015395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 5810936 - 5811024
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || ||| |||||||||| ||||  || |||| ||||||  |||||| || ||||||||| ||||||||||||||||    
T  5810936 tggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 45326105 - 45326020
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| || |||||||||||||| ||||  ||||||| ||||||  | ||||||| |||| |||||| |||||||| |||||    
T  45326105 ttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 32029829 - 32029908
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgta 109  Q
    ||||||| |||| ||||||||||||||||| |||| |||||||| ||||||  |||||| || ||||  ||||| |||||    
T  32029829 tggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 16180369 - 16180454
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| |||||||||||||||   |||| | |||||| ||||||  |||||| || |||| |||||| ||||||||||||    
T  16180369 tggttgtgagatgaatttaccaaaatatttataatacgtggggtgtacaat-gggtgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 10457886 - 10457992
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  10457886 gagatgaaagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaac 10457985  T
Q  112 attttcc 118  Q
    |||||||    
T  10457986 attttcc 10457992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 25996374 - 25996268
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||    
T  25996374 gagatgaaagagaaaatatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaac 25996275  T
Q  112 attttcc 118  Q
    |||||||    
T  25996274 attttcc 25996268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 9434230 - 9434124
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||| ||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  9434230 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaac 9434131  T
Q  112 attttcc 118  Q
    |||||||    
T  9434130 attttcc 9434124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 4190259 - 4190365
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||  |||| |||  ||| ||||||| |||||||||||||||||||||||||||||    
T  4190259 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaac 4190358  T
Q  112 attttcc 118  Q
    |||||||    
T  4190359 attttcc 4190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 52627972 - 52628077
Alignment:
Q  13 agatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaaca 112  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||| ||||||||||| ||| ||||||| | ||||||||||||||||||||| ||||||    
T  52627972 agatgaaagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaaca 52628071  T
Q  113 ttttcc 118  Q
    ||||||    
T  52628072 ttttcc 52628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 34791935 - 34791829
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||  ||||| ||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  34791935 gagatgaaagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaac 34791836  T
Q  112 attttcc 118  Q
    |||||||    
T  34791835 attttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 51757699 - 51757593
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||| ||||| ||| ||||||||| ||| ||||||| ||||||||||||||||||||| ||||||     
T  51757699 gagatgaaagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaat 51757600  T
Q  112 attttcc 118  Q
    |||||||    
T  51757599 attttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 42100788 - 42100688
Alignment:
Q  18 aaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    ||||| ||||| |||||||||||| || |||||||||||||| |||| |||||||| |||||| ||||||| || |||||||||||||||||||||||||    
T  42100788 aaagataaaatgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 42100689  T
Q  118 c 118  Q
    |    
T  42100688 c 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 46941141 - 46941053
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| |||||| || |||| || ||||||||||||||||||||||||||    
T  46941141 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 45126940 - 45127028
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| ||||||||||| ||||||||||||||    
T  45126940 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 40808953 - 40808865
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  |||||| || |||| |||||| ||||||||||||||    
T  40808953 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcc 40808865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 54237184 - 54237097
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || |||||||||||||||||||||||||    
T  54237184 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 27748662 - 27748565
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||| ||| ||| |||||||||| || |||||||||||||| |||| |||  ||| || ||| |||||||||| |||| |||||||||||||||||||    
T  27748662 aagataaagtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 24688414 - 24688502
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||   |||||  | ||||||||||||||||||||||||||    
T  24688414 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 24688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 25413769 - 25413681
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| |||  ||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  25413769 tggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 25413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 36150218 - 36150130
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| | || ||| |||| || |||  ||||||||| |||||||| |||||||||||||||||    
T  36150218 tggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 47191038 - 47191125
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || ||| |||||||||  |||| |||||| | |||||| ||||||| || ||||||||||||||||||||||||||    
T  47191038 tggttgtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 47191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 53273684 - 53273784
Alignment:
Q  18 aaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    ||||| ||| |||||||||||||| || |||||||||||||| |||| |||||| | |||||| |||| || || |||| | ||||||| ||||||||||    
T  53273684 aaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttc 53273783  T
Q  118 c 118  Q
    |    
T  53273784 c 53273784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 54246160 - 54246248
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||  |||| ||| |||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  54246160 tggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 40480837 - 40480750
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || |||||||||||||| |||| ||| || | ||||||  ||  ||||| |||||||||||||||||||||||||    
T  40480837 tggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 42394431 - 42394518
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||    |||| || |||||||||||||||||||||||||    
T  42394431 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 51249407 - 51249357
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatg 69  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  51249407 aagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatg 51249357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 29558240 - 29558330
Alignment:
Q  24 aaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatt 114  Q
    ||||| || ||||||||| |||||||||| |||| | ||||  || |||| |||||| || ||||||| |||||||||||||| |||||||    
T  29558240 aaaatgtgattgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacatt 29558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 53581870 - 53581956
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || ||| |||||||||| |||| ||| || | ||||||   |||||||| ||||| ||||||||||||||||||    
T  53581870 tggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 38336024 - 38335918
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  38336024 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaac 38335925  T
Q  112 attttcc 118  Q
    |||||||    
T  38335924 attttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 48119734 - 48119628
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  48119734 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 48119635  T
Q  112 attttcc 118  Q
    |||||||    
T  48119634 attttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 35003400 - 35003294
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||    
T  35003400 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 35003301  T
Q  112 attttcc 118  Q
    |||||||    
T  35003300 attttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 44112783 - 44112677
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  44112783 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 44112684  T
Q  112 attttcc 118  Q
    |||||||    
T  44112683 attttcc 44112677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 46168489 - 46168383
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||| | | |||||||||||||||||||||||||    
T  46168489 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaac 46168390  T
Q  112 attttcc 118  Q
    |||||||    
T  46168389 attttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 38113189 - 38113295
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||||||||||| || |||||||||||||| ||||||||||||| || |||||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  38113189 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataac 38113288  T
Q  112 attttcc 118  Q
    |||||||    
T  38113289 attttcc 38113295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 45639726 - 45639832
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| |||||||||||||    
T  45639726 gagatgaaagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaac 45639825  T
Q  112 attttcc 118  Q
    |||||||    
T  45639826 attttcc 45639832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 35000107 - 35000213
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||  ||||||||||  ||||||||||||| ||||||||||||||    
T  35000107 gagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaac 35000206  T
Q  112 attttcc 118  Q
    |||||||    
T  35000207 attttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 41065259 - 41065153
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||| |||||||||| |||||||||||||| || ||||||||||  || ||||||||||||| ||||| | |||||||||||||||||||||||||||||    
T  41065259 gagaggaaagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaac 41065160  T
Q  112 attttcc 118  Q
    |||||||    
T  41065159 attttcc 41065153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 45427739 - 45427845
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||| ||| |||||||||| || ||||||| |||||||||||||| ||| ||||||||||    
T  45427739 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaac 45427838  T
Q  112 attttcc 118  Q
    |||||||    
T  45427839 attttcc 45427845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 26585568 - 26585462
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||  ||||||| ||||    
T  26585568 gagatgaaagagaaagtatgattgcgagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaac 26585469  T
Q  112 attttcc 118  Q
    |||||||    
T  26585468 attttcc 26585462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 45705931 - 45705825
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| |||||| |||||| ||| |||||||||| || |||||||   |||||||||||||||||||||| ||||    
T  45705931 gagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataac 45705832  T
Q  112 attttcc 118  Q
    |||||||    
T  45705831 attttcc 45705825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 37814866 - 37814778
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| || |||||||||||||||||||||| |||||||| |||||| || ||||||| ||||||||||| ||||||||||||||    
T  37814866 tggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 43571098 - 43571186
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| |||||| ||||||| || ||||||||||||||||||||||||||    
T  43571098 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 23989535 - 23989624
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatg-attaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||   ||||||| || |||||||||||||||||||||||||    
T  23989535 tggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcc 23989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 14427404 - 14427347
Alignment:
Q  61 taatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 14427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 5489864 - 5489776
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  5489864 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 2497574 - 2497660
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||||||||  ||||||| ||||||    ||||||| |||| |||||| ||||||||||||    
T  2497574 tggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 48498974 - 48499062
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||| ||| ||||||   |||||  | ||||| ||||||||||||||||||||    
T  48498974 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 48499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 750317 - 750405
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||| |||||| |||||| |||||||||| | || |||||||| ||||||  |||||| ||   ||||||||||| ||||||||||||    
T  750317 tggttttgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcc 750405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 4401416 - 4401329
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatg-attaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||  |||| |||||||| |||||| | ||||| | || |||| ||||||||||| ||||||    
T  4401416 tggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 4888131 - 4888090
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggg 71  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  4888131 tggttgtgagataaacttaccaaaatatccctaatacatggg 4888090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 24769527 - 24769599
Alignment:
Q  46 ttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||||| |||| |||||||| ||||||   |||||  | |||| |||||||||| ||||||||||    
T  24769527 ttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcc 24769599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 7e-42; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 17619146 - 17619252
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  17619146 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaac 17619245  T
Q  112 attttcc 118  Q
    |||||||    
T  17619246 attttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 712066 - 711960
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  712066 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaac 711967  T
Q  112 attttcc 118  Q
    |||||||    
T  711966 attttcc 711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 55272370 - 55272476
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| ||||||||||||    
T  55272370 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaac 55272469  T
Q  112 attttcc 118  Q
    |||||||    
T  55272470 attttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 3756242 - 3756344
Alignment:
Q  13 agatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaaca 112  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3756242 agatgaaaga-aaagtatgattgtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaaca 3756340  T
Q  113 tttt 116  Q
    ||||    
T  3756341 tttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 32728463 - 32728357
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||||||||| ||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  32728463 gagatgaaagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaac 32728364  T
Q  112 attttcc 118  Q
    |||||||    
T  32728363 attttcc 32728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 46827700 - 46827806
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||||||||||||||||||| ||||||||||||||||||||||  | |||||||||| |||| |||||||  ||||||||||||||||||||||||||||    
T  46827700 gagatgaaagagaaaatatgtttgtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaac 46827799  T
Q  112 attttcc 118  Q
    |||||||    
T  46827800 attttcc 46827806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 35037111 - 35037007
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||| |||||||||    
T  35037111 gagaagaaagaaaaaatatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaac 35037012  T
Q  112 atttt 116  Q
    |||||    
T  35037011 atttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 48435573 - 48435679
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||| ||| |||| ||||||||| |||||||||| || ||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  48435573 gagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaac 48435672  T
Q  112 attttcc 118  Q
    | |||||    
T  48435673 actttcc 48435679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 38851619 - 38851515
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| |||||| |||||| ||| |||||||||| || |||| || | |||||||||||||| | ||||||||||    
T  38851619 gagatgaaagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaac 38851520  T
Q  112 atttt 116  Q
    |||||    
T  38851519 atttt 38851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 28988572 - 28988473
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||| | ||||| |||||| |||||| |||||| ||| || |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  28988572 aagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcc 28988473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 960864 - 960970
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| || | || | |||| ||||||||||||| ||| ||||| || |||| |||||||  ||||||||||||||||||||||||||||    
T  960864 gagatgaaagagaaagtacgattataagatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaac 960963  T
Q  112 attttcc 118  Q
    |||||||    
T  960964 attttcc 960970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 33703229 - 33703141
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||||| ||||  | ||||||||||||||||||||||||||    
T  33703229 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 33703141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 49229684 - 49229764
Alignment:
Q  38 agataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| ||||||||| |||||||||||||||||  || ||||||| |||||||||||||||| ||||||| |||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcc 49229764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 1771267 - 1771366
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| ||||| |||||||||||| || ||| |||||||||  |||| |||||||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  1771267 aagataaaatgtggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 41878494 - 41878407
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || ||| |||||||||| ||||| || |||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  41878494 tggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 27316725 - 27316813
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||| |||||| || ||||||||||||||||||| |||||||| || ||| ||||||| || |||||||||||| | |||||||||||    
T  27316725 tggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 27864652 - 27864564
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| |||| |||||| ||||||||||||||    
T  27864652 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcc 27864564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 55966358 - 55966446
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||| | ||||||  | ||||||| ||||||||||| ||||||||||||||    
T  55966358 tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 55966446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 28982835 - 28982922
Alignment:
Q  31 ggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||||| || |||||||||||||| ||||  ||||| | ||||||| ||||||  | ||||||||||||||||||||||||||    
T  28982835 ggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcc 28982922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 27893854 - 27893940
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| |||| |||||| ||||||||||||    
T  27893854 tggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 48463460 - 48463550
Alignment:
Q  28 tatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||||| || |||||||||||||| |||| |||||| | |||||| |  ||||||| |||| |||||| ||||||||||||||    
T  48463460 tatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcc 48463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 35017820 - 35017733
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| || | |||||||| |||||| || | || || ||||||||||||||||||||||||||    
T  35017820 tggttgtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 41848070 - 41847971
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||| | |||||||| ||| ||||| ||||||| ||  ||||||||||||| |||||| |||||| |||  ||||| ||||| |||||||||||||    
T  41848070 aagagaaagtgtggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 43949813 - 43949900
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatg-attaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| |||||||| |||||| ||||| | | || |||||||||||||||| ||||||    
T  43949813 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 19880060 - 19879991
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaata 81  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||| ||| ||||  ||||||| |||||||    
T  19880060 gagatgaaagagaaagtatgattgtgagatgaatttaccaaaatgtccataatatatggggtgtacaata 19879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 25051778 - 25051693
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| || |||||||||||||| |||| ||| |||| ||||||  |||||| || ||||| |||||||||| |||||||||    
T  25051778 ttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 36004110 - 36004204
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||  |||||||            ||||||||||||||| ||||||||||    
T  36004110 gagatgaaagagaaagtatggttgtgagataaatttatcaaaatgtccctaatatatggggt------------gtatgattaaagggtattcatgtaac 36004197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 23036068 - 23035980
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| ||||  || |||| ||||||| |||||| || ||||||  ||||||||||||||||||    
T  23036068 tggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcc 23035980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 27550397 - 27550309
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||| |||| || |||||||||||||| |||| |||| ||| ||||||   |||||  | ||||||||||||||||||||||||||    
T  27550397 tggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 39631189 - 39631102
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatg-attaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| |||| ||| |||||| ||||||| | || |||||| ||||||||| ||||||    
T  39631189 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 43514698 - 43514784
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || ||||||||||| || |||| ||||  || ||||||   ||||| || ||||||||||||||||||||||||    
T  43514698 tggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 41327544 - 41327641
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||| | ||| |||||||| ||||||||||||| ||| || |||||  ||| ||||||  ||||| ||| ||||||||||  ||||||||||||    
T  41327544 aagagaaagtgtggatgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 45490325 - 45490413
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| ||||||| ||| ||||| |||| |||| ||| ||||||  | ||||| | ||||  ||||||||||||||||||||    
T  45490325 tggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 12497041 - 12496956
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| |||| || |||||||||||||  |||| |||||| | ||||||   ||||| || |||||||||||||| |||||||||||    
T  12497041 ttgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 56215899 - 56215947
Alignment:
Q  20 agagaaaatatggttgtgagataaatttaccaaaatatccttaatgcat 68  Q
    ||||||| | |||||||||||||||||| ||||||||||  ||||||||    
T  56215899 agagaaagtgtggttgtgagataaattttccaaaatatcgctaatgcat 56215947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 12415454 - 12415560
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12415454 gagatgaaagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaac 12415553  T
Q  112 attttcc 118  Q
    |||||||    
T  12415554 attttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 12427514 - 12427620
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12427514 gagatgaaagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaac 12427613  T
Q  112 attttcc 118  Q
    |||||||    
T  12427614 attttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 43114663 - 43114557
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  43114663 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 43114564  T
Q  112 attttcc 118  Q
    |||||||    
T  43114563 attttcc 43114557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 966828 - 966934
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  966828 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 966927  T
Q  112 attttcc 118  Q
    |||||||    
T  966928 attttcc 966934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 18491811 - 18491705
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||||||||||| || |||||||||||||| ||||||||||||| | ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  18491811 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaac 18491712  T
Q  112 attttcc 118  Q
    |||||||    
T  18491711 attttcc 18491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 11825648 - 11825752
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||||||||| || |||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  11825648 gagatgaaagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 11825747  T
Q  112 atttt 116  Q
    |||||    
T  11825748 atttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 41281968 - 41282072
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || ||| |||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  41281968 gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 41282067  T
Q  112 atttt 116  Q
    |||||    
T  41282068 atttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 16804074 - 16803968
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || ||| |||||| ||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  16804074 gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaac 16803975  T
Q  112 attttcc 118  Q
    |||||||    
T  16803974 attttcc 16803968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 16843356 - 16843250
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || ||| |||||| ||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  16843356 gagatgaaagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaac 16843257  T
Q  112 attttcc 118  Q
    |||||||    
T  16843256 attttcc 16843250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 4299414 - 4299518
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||| |||||| || |||| ||||||||| ||||||||||||| || ||||||||||| || ||||||| |||||||||||||||||||||||| ||||    
T  4299414 gagattaaagagtaagtatgattgtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataac 4299513  T
Q  112 atttt 116  Q
    |||||    
T  4299514 atttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 34895735 - 34895841
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||| ||| |||| ||||||||| |||||||||| || ||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  34895735 gagatgaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaac 34895834  T
Q  112 attttcc 118  Q
    | |||||    
T  34895835 actttcc 34895841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 4451944 - 4452026
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgatta 94  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||  ||| ||||||||| ||||||||||    
T  4451944 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgtacaataagatgtatgatta 4452026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 34817777 - 34817875
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||| | |||||||||||| ||||||||||||| | | || |||||||||| |||||| |||||| ||| |||||||||||||||||||||||||    
T  34817777 aagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 30838720 - 30838632
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||||| ||||  | ||||||||||||||||||||||||||    
T  30838720 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 30838632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 14285782 - 14285676
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||||  | |||||| |||||||||||||||| |||||  || |||| ||||||| |||||||||||||||||||||  |||||     
T  14285782 gagatgaaagagaaagtatgactctgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaat 14285683  T
Q  112 attttcc 118  Q
    |||||||    
T  14285682 attttcc 14285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 6518484 - 6518566
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    ||||||||| || |||||||||| ||| ||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||    
T  6518484 ttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 13780736 - 13780835
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||| | |||||||||||| |||||| |||||||||| ||||| ||||||| |||||| |||||| ||| ||||  ||||| ||||||||||||||    
T  13780736 aagagaaagtgtggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 1750502 - 1750414
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| ||| |||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  1750502 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 4764738 - 4764826
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| |||||||||||||||   |||| |||||||| ||||||| |||||| || |||| |||||| ||||||||||||||    
T  4764738 tggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcc 4764826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 16096835 - 16096747
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || | |||||||||||| |||| |||||||| || |||  |||||| || ||||||||||||||||||||||||||    
T  16096835 tggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 12302265 - 12302353
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| ||| |||| ||||||  ||||||  | ||||||||||||||||||||||||||    
T  12302265 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 12531657 - 12531744
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggt 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||   || |||||| || ||| ||||||  ||||||||||||||||||    
T  12531657 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaa-gcccataatgcttgaggtgtacaattgggtgtatgattaaagggt 12531744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 19047245 - 19047158
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||    |||| || |||||||||||||||||||||||||    
T  19047245 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 43335777 - 43335863
Alignment:
Q  32 gttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||| || |||||||||||||| |||| |||||| | |||||| ||||||| || |||| | ||||||| |||||||||||    
T  43335777 gttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcc 43335863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 33229374 - 33229303
Alignment:
Q  46 ttaccaaaatatccttaatgcatggggtatacaataaggtgtatg-attaaagggtgttcatgtaacatttt 116  Q
    |||||||||||||| |||| |||||||| |||||| ||||||| | || |||||||||||||||| ||||||    
T  33229374 ttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 43490413 - 43490499
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    ||||| |||||| || |||||||||||||| |||| ||| | || ||||||  | |||| || ||||||||||||||||||||||||    
T  43490413 tggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 8896598 - 8896681
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    ||||||||| ||||||||||||||| | || || || |||| ||||||    ||| ||| ||||||||||||||||||||||||    
T  8896598 ttgtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 42026855 - 42026767
Alignment:
Q  32 gttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaa--gggtgttcatgtaacattttcc 118  Q
    |||||||||| ||||| ||||||||||| ||||||  ||| | ||||||    ||||||| ||||  ||||||||||||||||||||||    
T  42026855 gttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcc 42026767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 35181622 - 35181516
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  35181622 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaac 35181523  T
Q  112 attttcc 118  Q
    |||||||    
T  35181522 attttcc 35181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 16603620 - 16603726
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    |||||||||||| || |||||||||||||| ||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  16603620 gagatgaaagagtaagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaac 16603719  T
Q  112 attttcc 118  Q
    |||||||    
T  16603720 attttcc 16603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 34304894 - 34304788
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||||||||| ||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  34304894 gagatgaaagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaac 34304795  T
Q  112 attttcc 118  Q
    |||||||    
T  34304794 attttcc 34304788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 16358827 - 16358933
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttc-atgtaa 110  Q
    ||||||||| ||||| |||||||||||||| |||||| |||||||| ||||||||||||| | ||||||| |||||||||||||||||| ||| ||||||    
T  16358827 gagatgaaaaagaaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaa 16358926  T
Q  111 cattttc 117  Q
    |||||||    
T  16358927 cattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 18066712 - 18066818
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| || |||| ||||||||| |||| |||||| | |||||||   |||||||||||||||||||||||||||    
T  18066712 gagatgaaagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaac 18066811  T
Q  112 attttcc 118  Q
    |||||||    
T  18066812 attttcc 18066818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 33629987 - 33630091
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| ||| |||||||||| || |||| ||||| ||| |||||||| |||| |||||| ||||||||||||||||||||||| ||||||    
T  33629987 gagatgaaagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaac 33630086  T
Q  112 atttt 116  Q
    |||||    
T  33630087 atttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 1375628 - 1375542
Alignment:
Q  32 gttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||||||||||||||||||| ||||  ||||||| ||||||  ||||||||| |||| ||||||||||||| |||||||    
T  1375628 gttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 42295283 - 42295197
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| ||||| || |||||| ||||||| || ||||||||||||||||||||||||    
T  42295283 tggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 19386559 - 19386670
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatg---gggta--tacaataaggtgtatgattaaagggtgttcat 106  Q
    ||||||||||||||| ||| |||||||||| |||||| ||||| || |||||||||||   | | |  || |||| ||||||||||||||||||||||||    
T  19386559 gagatgaaagagaaagtatagttgtgagatgaatttatcaaaacattcttaatgcatgaaagagaaagtataatagggtgtatgattaaagggtgttcat 19386658  T
Q  107 gtaacattttcc 118  Q
    ||||||||||||    
T  19386659 gtaacattttcc 19386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 11582854 - 11582766
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  11582854 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 29705450 - 29705362
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || ||| |||||||||| |||| |||||||| ||||||  ||||||  | ||||||||||||||||||||||||||    
T  29705450 tggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 36743495 - 36743583
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  36743495 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 29800962 - 29801048
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| |||| |||||| ||||||||||||    
T  29800962 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 10678146 - 10678240
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||  |||||||            ||||||||||||||| ||||||||||    
T  10678146 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatatatggggt------------gtatgattaaagggtattcatgtaac 10678233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 2165975 - 2166063
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||| |||||| || |||||||||||||  |||| |||||||||||||||  |||||| || |||| ||||||||||||| |||||||    
T  2165975 tggttatgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 20148848 - 20148762
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| ||||  ||| ||| ||||||  | ||||||| ||||||||||| ||||||||||||    
T  20148848 tggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 26125723 - 26125637
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||    ||||||| ||||||||||| ||||||||||||    
T  26125723 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 42699345 - 42699259
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||| ||||||||| |||| |||  ||| ||||||  |||||| || ||||||||||||||||||||||||    
T  42699345 tggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 30912575 - 30912660
Alignment:
Q  31 ggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    ||||||||||| || ||||||||||| || |||| ||||  || ||||||  |||||| || ||||||||||||||||||||||||    
T  30912575 ggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 5754991 - 5754903
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| ||||  ||||| | ||||||  | |||| || |||| |||||||||||||||||||||    
T  5754991 tggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcc 5754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 30660754 - 30660842
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||| |||| || |||||||||||||| |||| ||| |||| ||||||  | ||||  | ||||||||||||||||||||||||||    
T  30660754 tggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcc 30660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 31384752 - 31384672
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaa 110  Q
    |||||||||||| || |||||||||||| | |||| |||||||| |||||||   |||| || ||||||||||||||||||    
T  31384752 tggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaa 31384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 42197447 - 42197535
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| | || | ||||  |||||| || |||| |||||||||||||||||||||    
T  42197447 tggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 45397404 - 45397317
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || |||| ||||||||| |||| ||| |||| || |||  |||||| || ||||||||||||| |||||||||||    
T  45397404 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 2547084 - 2546996
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| |||| ||| ||||||   |||||  | ||||| ||||||||||||||||||||    
T  2547084 tggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 2546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 40528635 - 40528735
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatg-attaaagggtgttcatgtaacattttc 117  Q
    |||||||| | ||||||||||||||||||| |||||| ||| ||||  ||||||| ||||||  ||| | || || ||||||||||||||||  ||||||    
T  40528635 aagagaaagtgtggttgtgagataaatttatcaaaatgtccctaatatatggggtgtacaatggggtttgtgaataaaagggtgttcatgtattattttc 40528734  T
Q  118 c 118  Q
    |    
T  40528735 c 40528735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 32328818 - 32328867
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcat 68  Q
    |||||||| ||| ||||||||||||| |||||||||||| | ||||||||    
T  32328818 aagagaaagtatagttgtgagataaacttaccaaaatattcctaatgcat 32328867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 28977182 - 28977146
Alignment:
Q  82 aggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||| || ||||||||||||||||||||||||||    
T  28977182 aggtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 33242509 - 33242403
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||    
T  33242509 gagatgaaagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaac 33242410  T
Q  112 attttcc 118  Q
    |||||||    
T  33242409 attttcc 33242403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 27441648 - 27441544
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| || | ||||||| |||||||||||||||||||||||||||||    
T  27441648 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaac 27441549  T
Q  112 atttt 116  Q
    |||||    
T  27441548 atttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 3213499 - 3213400
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| |||||| || ||||||| ||||||||||| ||||||||||||||    
T  3213499 aagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 3213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 33254013 - 33253913
Alignment:
Q  18 aaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    ||||| ||| |||| ||||||||| |||||||||| || ||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||    
T  33254013 aaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttc 33253914  T
Q  118 c 118  Q
    |    
T  33253913 c 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 31109216 - 31109322
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||||| |||| || || | |||||| |||||||||| || |||||||||| || |||  | |||||||||||||||||||||||||||    
T  31109216 gagatgaaagagaaaatgtggtcgtaagttgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaac 31109315  T
Q  112 attttcc 118  Q
    |||||||    
T  31109316 attttcc 31109322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 7273350 - 7273435
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| || |||||||||||||  |||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  7273350 ttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 26670021 - 26670109
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||| ||| |||||| ||||||| || ||||||||||||||||||||||||||    
T  26670021 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 13743233 - 13743321
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| |||| |||||||||||||||||||||    
T  13743233 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 13748733 - 13748821
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||||| ||||||  | ||||||| |||| |||||||||||||||||||||    
T  13748733 tggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 21293689 - 21293777
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    ||||||||| || |||||||||||||||||||||| |||||||| |||| | |  ||||||| ||||||||||| ||||||||||||||    
T  21293689 tggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcc 21293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 24203999 - 24204085
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    |||||||||||| || |||||||||||||| |||| ||||| || ||||||| |||||| || |||| |||||||||||||||||||    
T  24203999 tggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 7292835 - 7292747
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| || ||| |||||||||| |||| ||||||| |||||||||||||    
T  7292835 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcc 7292747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 7367637 - 7367549
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||||| | |||||| |||||||||| |||| | ||||||| |||||||||||    
T  7367637 tggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcc 7367549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 9698345 - 9698433
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||  | |||| || ||||||||||||||||||||||||||    
T  9698345 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 26466887 - 26466799
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || ||||||||||| || |||| ||||| || ||||||  |||||| || ||||||||||| ||||||||||||||    
T  26466887 tggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 30014442 - 30014343
Alignment:
Q  19 aagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| ||| |||||||||||||| || |||||||||||| | |||| |||||| | || |||  | |||| || ||||||||||||||||||||||||||    
T  30014442 aagataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 21280017 - 21279929
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| ||||||||||||||||| |||| |||||| | | ||||    ||||  | ||||||||||||||||||||||||||    
T  21280017 tggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcc 21279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 30736067 - 30735984
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacatttt 116  Q
    ||||||||| || |||||||||||||  |||| |||| ||| ||||||  |||||| || ||||  ||||||||||||||||||    
T  30736067 ttgtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 45713 - 45817
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| || | ||||||| |||||||||||||||||||||||||||||    
T  45713 gagatgaaagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaac 45812  T
Q  112 atttt 116  Q
    |||||    
T  45813 atttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 35450 - 35556
Alignment:
Q  12 gagatgaaagagaaaatatggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaac 111  Q
    ||||||||||||||| |||||||||||||| |||||||||| || ||| ||||||||||||| ||||||| |||||||||||||| |||||| |||||||    
T  35450 gagatgaaagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaac 35549  T
Q  112 attttcc 118  Q
    |||||||    
T  35550 attttcc 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 773 - 685
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| |||| |||| ||| |||||| ||||||| || ||||||||||||||||||||||||||    
T  773 tggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T

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Target: scaffold0385 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 11339 - 11251
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||||||||||||| ||||  ||||||| ||||||  ||||||||| ||||| |||||||||| |||||||||    
T  11339 tggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcc 11251  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 112743 - 112656
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttc 117  Q
    |||||||||||| || |||||||||||||| |||| ||| |||| ||||||    |||| || |||||||||||||||||||||||||    
T  112743 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

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Target: scaffold0187 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 14200 - 14288
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| ||| || | ||||||  ||||||  | ||||||||||||||||||||||||||    
T  14200 tggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T

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Target: scaffold0187; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 24528 - 24616
Alignment:
Q  30 tggttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||||||||||| || |||| ||||||||| |||| ||| || | ||||||  ||||||  | ||||||||||||||||||||||||||    
T  24528 tggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 23436 - 23521
Alignment:
Q  33 ttgtgagataaatttaccaaaatatccttaatgcatggggtatacaataaggtgtatgattaaagggtgttcatgtaacattttcc 118  Q
    |||| |||| || |||||||||||||  |||| |||||| | ||||||   ||||| || |||||||||||||| |||||||||||    
T  23436 ttgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

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