View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3630_high_2 (Length: 675)

Name: NF3630_high_2
Description: NF3630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3630_high_2
NF3630_high_2
[»] chr4 (35 HSPs)
chr4 (49-666)||(5211998-5212612)
chr4 (58-119)||(25753611-25753672)
chr4 (58-145)||(29113462-29113547)
chr4 (58-145)||(43943686-43943771)
chr4 (58-117)||(5488406-5488465)
chr4 (58-117)||(12016689-12016748)
chr4 (58-117)||(12016897-12016956)
chr4 (58-119)||(27048414-27048475)
chr4 (58-158)||(29669684-29669782)
chr4 (58-119)||(52214652-52214713)
chr4 (58-118)||(53386118-53386178)
chr4 (58-117)||(13254422-13254481)
chr4 (58-117)||(23018509-23018568)
chr4 (58-97)||(28395236-28395275)
chr4 (58-117)||(29669369-29669428)
chr4 (58-117)||(36558472-36558531)
chr4 (58-117)||(45427258-45427317)
chr4 (60-119)||(52827240-52827299)
chr4 (58-117)||(53740221-53740280)
chr4 (58-116)||(21497689-21497747)
chr4 (58-116)||(21498227-21498285)
chr4 (58-96)||(21498591-21498629)
chr4 (57-119)||(28085731-28085793)
chr4 (58-116)||(28245828-28245886)
chr4 (58-116)||(28246033-28246091)
chr4 (58-158)||(34206261-34206360)
chr4 (58-158)||(991204-991302)
chr4 (58-115)||(6778682-6778739)
chr4 (58-158)||(15665153-15665251)
chr4 (70-146)||(49380898-49380972)
chr4 (58-158)||(51469481-51469579)
chr4 (58-94)||(41176768-41176804)
chr4 (58-94)||(43972417-43972453)
chr4 (58-94)||(50858074-50858110)
chr4 (58-94)||(51470545-51470581)
[»] chr7 (24 HSPs)
chr7 (58-240)||(37272051-37272228)
chr7 (58-158)||(1661197-1661295)
chr7 (58-146)||(6783050-6783136)
chr7 (58-119)||(40137702-40137763)
chr7 (58-117)||(31374804-31374863)
chr7 (58-159)||(29780146-29780245)
chr7 (68-145)||(2179667-2179743)
chr7 (58-145)||(8681897-8681982)
chr7 (67-150)||(9379008-9379089)
chr7 (58-157)||(43288533-43288630)
chr7 (58-97)||(23396668-23396707)
chr7 (58-117)||(28910071-28910130)
chr7 (58-117)||(43384286-43384345)
chr7 (58-116)||(48116302-48116360)
chr7 (70-146)||(6782838-6782912)
chr7 (58-158)||(7135249-7135347)
chr7 (66-119)||(14691109-14691162)
chr7 (58-99)||(23821366-23821407)
chr7 (58-119)||(33855728-33855789)
chr7 (58-119)||(43288301-43288362)
chr7 (58-94)||(1663610-1663646)
chr7 (58-145)||(35866645-35866730)
chr7 (58-94)||(36092398-36092434)
chr7 (58-94)||(41670895-41670931)
[»] chr8 (22 HSPs)
chr8 (58-218)||(34248302-34248457)
chr8 (58-204)||(34248033-34248175)
chr8 (58-146)||(16454641-16454727)
chr8 (58-145)||(43599324-43599409)
chr8 (58-117)||(10989040-10989099)
chr8 (58-117)||(10989247-10989306)
chr8 (58-117)||(15011035-15011094)
chr8 (58-117)||(20760666-20760725)
chr8 (58-119)||(36997203-36997264)
chr8 (58-145)||(8559594-8559679)
chr8 (58-145)||(33435896-33435981)
chr8 (58-117)||(3183917-3183976)
chr8 (58-117)||(18905895-18905954)
chr8 (58-117)||(22277563-22277622)
chr8 (58-117)||(32931440-32931499)
chr8 (58-117)||(40902399-40902458)
chr8 (58-117)||(42228810-42228869)
chr8 (58-119)||(41371170-41371229)
chr8 (58-119)||(39124961-39125022)
chr8 (58-94)||(21653866-21653902)
chr8 (58-94)||(23027834-23027870)
chr8 (58-94)||(36993953-36993989)
[»] chr6 (23 HSPs)
chr6 (58-146)||(24558800-24558886)
chr6 (58-146)||(5269279-5269365)
chr6 (58-119)||(28149830-28149891)
chr6 (58-117)||(10733444-10733503)
chr6 (58-117)||(15101117-15101176)
chr6 (58-117)||(16877016-16877075)
chr6 (58-115)||(17147911-17147968)
chr6 (62-154)||(30539239-30539329)
chr6 (58-114)||(16876836-16876892)
chr6 (58-145)||(24558596-24558681)
chr6 (58-117)||(1744848-1744907)
chr6 (58-117)||(8144056-8144115)
chr6 (58-117)||(12134489-12134548)
chr6 (58-117)||(19054532-19054591)
chr6 (58-117)||(19712615-19712674)
chr6 (58-117)||(24055115-24055174)
chr6 (58-116)||(10418344-10418402)
chr6 (58-99)||(22911496-22911537)
chr6 (70-119)||(25184040-25184089)
chr6 (58-119)||(25999060-25999121)
chr6 (58-119)||(26098791-26098852)
chr6 (58-145)||(11313388-11313473)
chr6 (56-112)||(29256446-29256502)
[»] chr5 (37 HSPs)
chr5 (58-145)||(38376744-38376829)
chr5 (58-117)||(28358041-28358100)
chr5 (58-159)||(38131763-38131862)
chr5 (58-145)||(13413597-13413682)
chr5 (58-145)||(35526994-35527079)
chr5 (58-117)||(48110-48169)
chr5 (58-145)||(35527280-35527366)
chr5 (58-209)||(38663199-38663345)
chr5 (58-99)||(18914374-18914415)
chr5 (58-146)||(37656738-37656824)
chr5 (58-114)||(48317-48373)
chr5 (58-114)||(2908568-2908624)
chr5 (58-114)||(2908775-2908831)
chr5 (58-145)||(3762919-3763004)
chr5 (58-114)||(24792128-24792184)
chr5 (58-145)||(30330662-30330747)
chr5 (58-145)||(40169047-40169132)
chr5 (58-210)||(29432363-29432510)
chr5 (58-97)||(34457155-34457194)
chr5 (58-117)||(37995640-37995699)
chr5 (58-117)||(43490469-43490528)
chr5 (59-117)||(11632470-11632528)
chr5 (58-159)||(14769838-14769937)
chr5 (58-96)||(24125122-24125160)
chr5 (62-116)||(28156070-28156124)
chr5 (58-150)||(36307929-36308018)
chr5 (58-158)||(13843697-13843795)
chr5 (58-99)||(18914167-18914208)
chr5 (58-158)||(27760075-27760173)
chr5 (58-146)||(37781850-37781936)
chr5 (58-99)||(43490222-43490263)
chr5 (69-145)||(43490273-43490347)
chr5 (58-94)||(1892096-1892132)
chr5 (58-94)||(12965252-12965288)
chr5 (62-145)||(36878339-36878420)
chr5 (63-91)||(38669986-38670014)
chr5 (58-145)||(40168865-40168950)
[»] chr3 (43 HSPs)
chr3 (58-117)||(19820534-19820593)
chr3 (58-119)||(50692563-50692624)
chr3 (58-145)||(39956680-39956765)
chr3 (58-145)||(49477547-49477632)
chr3 (58-145)||(51338447-51338532)
chr3 (58-117)||(4191128-4191187)
chr3 (58-117)||(11414402-11414461)
chr3 (58-117)||(39078777-39078836)
chr3 (58-117)||(50692362-50692421)
chr3 (67-145)||(54495544-54495620)
chr3 (58-119)||(1736994-1737055)
chr3 (58-158)||(50203863-50203961)
chr3 (58-142)||(50338388-50338470)
chr3 (57-145)||(53640177-53640263)
chr3 (58-145)||(4029650-4029735)
chr3 (58-145)||(9264092-9264177)
chr3 (57-117)||(34715460-34715520)
chr3 (62-145)||(39956477-39956558)
chr3 (59-158)||(43101378-43101475)
chr3 (58-114)||(49477369-49477425)
chr3 (58-145)||(51642641-51642726)
chr3 (58-97)||(9264299-9264338)
chr3 (58-117)||(22339780-22339839)
chr3 (58-117)||(44573678-44573737)
chr3 (58-117)||(44573975-44574034)
chr3 (58-97)||(51642434-51642473)
chr3 (58-97)||(54591471-54591510)
chr3 (58-96)||(37058777-37058815)
chr3 (58-116)||(40230645-40230703)
chr3 (57-119)||(45941336-45941397)
chr3 (57-94)||(14170004-14170041)
chr3 (57-94)||(34356847-34356884)
chr3 (57-94)||(48407547-48407584)
chr3 (64-97)||(53639977-53640010)
chr3 (58-94)||(3985835-3985871)
chr3 (58-145)||(9264506-9264591)
chr3 (58-94)||(10453709-10453745)
chr3 (58-114)||(21832205-21832261)
chr3 (58-94)||(22407447-22407483)
chr3 (58-94)||(22407654-22407690)
chr3 (58-145)||(26926920-26927004)
chr3 (65-97)||(37223804-37223836)
chr3 (58-94)||(51338409-51338445)
[»] chr2 (38 HSPs)
chr2 (57-145)||(883606-883692)
chr2 (61-145)||(12431911-12431993)
chr2 (58-145)||(17727417-17727502)
chr2 (58-145)||(27545122-27545207)
chr2 (58-145)||(32667196-32667281)
chr2 (58-117)||(883889-883948)
chr2 (58-117)||(20998995-20999054)
chr2 (58-119)||(10429776-10429837)
chr2 (58-119)||(28895564-28895624)
chr2 (58-145)||(3435492-3435577)
chr2 (58-157)||(25441697-25441794)
chr2 (58-145)||(31761344-31761429)
chr2 (58-117)||(3976477-3976536)
chr2 (58-117)||(6183372-6183431)
chr2 (62-117)||(7877883-7877938)
chr2 (58-117)||(11969091-11969150)
chr2 (58-117)||(21214207-21214266)
chr2 (58-97)||(33985777-33985816)
chr2 (58-97)||(34775416-34775455)
chr2 (60-99)||(39108277-39108316)
chr2 (58-117)||(42768340-42768399)
chr2 (58-117)||(43195823-43195882)
chr2 (58-96)||(16007037-16007075)
chr2 (61-158)||(18901873-18901968)
chr2 (59-117)||(21213892-21213950)
chr2 (58-116)||(25286266-25286324)
chr2 (58-119)||(10542069-10542130)
chr2 (58-158)||(10849497-10849595)
chr2 (70-150)||(13839277-13839355)
chr2 (58-158)||(23054326-23054424)
chr2 (58-146)||(25621291-25621377)
chr2 (70-119)||(32810894-32810943)
chr2 (58-91)||(33145672-33145705)
chr2 (58-99)||(39108412-39108453)
chr2 (58-119)||(39596712-39596773)
chr2 (58-94)||(93144-93180)
chr2 (58-94)||(901985-902021)
chr2 (58-94)||(5424788-5424824)
[»] chr1 (30 HSPs)
chr1 (57-145)||(39649089-39649175)
chr1 (58-117)||(43361558-43361617)
chr1 (58-145)||(5222707-5222792)
chr1 (58-145)||(52846855-52846940)
chr1 (58-117)||(8520099-8520158)
chr1 (58-117)||(17419826-17419885)
chr1 (58-117)||(19937049-19937108)
chr1 (58-97)||(26366838-26366877)
chr1 (58-97)||(29272913-29272952)
chr1 (58-97)||(29273072-29273111)
chr1 (58-97)||(29273231-29273270)
chr1 (58-117)||(31305750-31305809)
chr1 (58-117)||(38474322-38474381)
chr1 (58-97)||(43361763-43361802)
chr1 (58-97)||(48558327-48558366)
chr1 (58-116)||(20735795-20735853)
chr1 (57-99)||(21538822-21538864)
chr1 (58-116)||(22892439-22892497)
chr1 (58-158)||(2697337-2697435)
chr1 (58-158)||(4022131-4022229)
chr1 (58-119)||(21428064-21428125)
chr1 (58-158)||(40664210-40664308)
chr1 (58-94)||(463089-463125)
chr1 (58-94)||(2104266-2104302)
chr1 (58-94)||(11149429-11149465)
chr1 (58-114)||(15013567-15013623)
chr1 (58-145)||(15392038-15392123)
chr1 (58-94)||(20735584-20735620)
chr1 (58-94)||(36332174-36332210)
chr1 (58-94)||(45264724-45264760)
[»] scaffold0166 (1 HSPs)
scaffold0166 (58-114)||(34511-34567)
[»] scaffold0029 (1 HSPs)
scaffold0029 (58-145)||(76865-76950)
[»] scaffold0434 (1 HSPs)
scaffold0434 (58-117)||(13345-13404)
[»] scaffold0419 (1 HSPs)
scaffold0419 (58-96)||(4245-4283)
[»] scaffold1138 (1 HSPs)
scaffold1138 (58-119)||(2085-2146)
[»] scaffold0054 (1 HSPs)
scaffold0054 (58-99)||(11349-11390)


Alignment Details
Target: chr4 (Bit Score: 566; Significance: 0; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 49 - 666
Target Start/End: Original strand, 5211998 - 5212612
Alignment:
Q  49 ttgcttcaataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaa 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  5211998 ttgcttcaataactcattcttacaaaaccggattgtaaggtgaggattgtctattctttataaactcttat--taagagtcttacctatctgatgtgaaa 5212095  T
Q  149 ctaaatccactactccatcaaaaccaacccaaggcagcttaaatttcgcaattaggcgactagaggcggaccacagtaatgacggaatttcctactaaat 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5212096 ctaaatccactactccatcaaaaccaacccaaggcagcttaaatttcgcaattaggcgactagaggcggaccacagtaatgacggaatttcctactaaat 5212195  T
Q  249 caaaagattgtttttgaagctaggctgagaccatagaggatgaatctagctcaatacataagttaagtcaatgattaacagatgccggttctatagctct 348  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5212196 cagaagattgtttttgaagctaggctgagaccatagaggatgaatctagctcaatacataagttaagtcaatgattaacagatgccggttcaatagctct 5212295  T
Q  349 caactccaggaagtctagcatgaaaagaagacgtgacaccaagattggattattcttaaaagccccatcaattattttannnnnnnnaaggggagcccta 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||    
T  5212296 caactccaggaagtctagcatgaaaagaagacgtgacaccaagattggattattcttaaaagccccatcaattatttta-tttttttaaggggagcccta 5212394  T
Q  449 tcgatattacttctttgataataggagctttagaatgatgaatatcaacttttaagctttcgagaatgaggaagtcactgatagagttggttgaatcctt 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5212395 tcgatattacttctttgataataggagctttagaatgatgaatatcaacttttaagctttcgagaatgaggaagtcactgatagagttggttgaatcctt 5212494  T
Q  549 agttttatttcctaaagggaatcatttggaatgaagggagaaattgttgatttcctaggaataactctattgttaaatctagcttgatttgtggaaaacc 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5212495 agttttatttcctaaagggaatcatttggaatgaagggagaaattgttgatttcctaggaataactctattgttaaatctagcttgatttgtggaaaacc 5212594  T
Q  649 aaatagagttgatgatgt 666  Q
    ||||||||||||||||||    
T  5212595 aaatagagttgatgatgt 5212612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 25753611 - 25753672
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||||    
T  25753611 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttat 25753672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 29113547 - 29113462
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||| | ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||||||||||    
T  29113547 taactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatctgatgtg 29113462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 43943771 - 43943686
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  43943771 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 43943686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 5488465 - 5488406
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  5488465 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 5488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 12016689 - 12016748
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  12016689 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 12016748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 12016897 - 12016956
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  12016897 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 12016956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 27048414 - 27048475
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||||    
T  27048414 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttat 27048475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 29669684 - 29669782
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||  | | ||||||  || ||||||||||||  ||||||||||    
T  29669684 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagtgctatctatctgatgtgggactaaatcca 29669781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 52214713 - 52214652
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||||    
T  52214713 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttat 52214652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 53386118 - 53386178
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctta 118  Q
    |||||||| ||||||||||||  |||||||||||||| ||||   ||||||||||||||||    
T  53386118 taactcatccttacaaaaccgacttgtaaggtgaggaatgtctcctctttataaactctta 53386178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 13254481 - 13254422
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  13254481 taactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactctt 13254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 23018568 - 23018509
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  23018568 taactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactctt 23018509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 28395275 - 28395236
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  28395275 taactcatccttacaaaaccggcttgtaaggtgaggattg 28395236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 29669369 - 29669428
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  29669369 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 29669428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 36558472 - 36558531
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| ||   | |||||||||||||||    
T  36558472 taactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactctt 36558531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 45427258 - 45427317
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  45427258 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 45427317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 52827240 - 52827299
Alignment:
Q  60 actcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||||    
T  52827240 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttat 52827299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 53740280 - 53740221
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  53740280 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 53740221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 21497689 - 21497747
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||    
T  21497689 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21497747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 21498285 - 21498227
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||    
T  21498285 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 21498629 - 21498591
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggatt 96  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  21498629 taactcatccttacaaaaccggcttgtaaggtgaggatt 21498591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 28085793 - 28085731
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    ||||||| | ||||||||||||| |||||||||||||| || |   |||||||||||||||||    
T  28085793 ataactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttat 28085731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 28245886 - 28245828
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| ||| ||||||||||||| |   ||||||||||||||    
T  28245886 taactcatccttacaaaaccggcttgcaaggtgaggattgcctcctctttataaactct 28245828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 28246091 - 28246033
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| ||| ||||||||||||| |   ||||||||||||||    
T  28246091 taactcatccttacaaaaccggtttgcaaggtgaggattgccttctctttataaactct 28246033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 34206261 - 34206360
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataa-actcttatattaagagtcttacctatctgatgtgaaactaaatcc 156  Q
    |||||||| ||||| ||||||| |||||||||||||| || |   ||||||||| |||||  ||| |||||||||| ||| | ||||||| |||||||||    
T  34206261 taactcatccttacgaaaccggcttgtaaggtgaggagtgcctcctctttataagactct--tatcaagagtcttatctaaccgatgtgagactaaatcc 34206358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 991302 - 991204
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   || |||||||||||  | | |||||| ||| ||||| ||||||  ||||||||||    
T  991302 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactct--tctcaagagtgttatctatccgatgtgggactaaatcca 991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 6778682 - 6778739
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactc 115  Q
    |||||||  ||||||||||||| |||| ||||||||||||||   |||||||||||||    
T  6778682 taactcaaccttacaaaaccggcttgtgaggtgaggattgtctcctctttataaactc 6778739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 15665251 - 15665153
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||| ||||||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  15665251 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactct--tctcaagagtcctatctatccgatgtgggactaaatcca 15665154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 49380898 - 49380972
Alignment:
Q  70 acaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| |||||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtga 49380972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 51469579 - 51469481
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| |||||| |||||| |||||||||||||| || |   ||||||||||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  51469579 taactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagtcctatctatccgatgtgggactaaatcca 51469482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 41176804 - 41176768
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  41176804 taactcatccttacaaaaccggcttgtaaggtgagga 41176768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 43972453 - 43972417
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  43972453 taactcatccttacaaaaccggcttgtaaggtgagga 43972417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 50858110 - 50858074
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  50858110 taactcatccttacaaaaccggcttgtaaggtgagga 50858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 51470581 - 51470545
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  51470581 taactcatccttacaaaaccggcttgtaaggtgagga 51470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 7e-17; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 58 - 240
Target Start/End: Original strand, 37272051 - 37272228
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||  ||| ||||||| || ||| | ||||||  |||||||||     
T  37272051 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tatcaagagtcctatctaaccgatgtgggactaaatcc- 37272147  T
Q  158 ctactccatcaaaaccaacccaaggcagcttaaatttcgcaattaggcgactagaggcggaccacagtaatgacggaatttcc 240  Q
      || || ||||| ||||| | ||||| || |||| |||||||||||||||||| || ||||| || ||| | ||||||||||    
T  37272148 --accccctcaaagccaacacgaggcaactcaaatgtcgcaattaggcgactaggggtggaccgcaataaaggcggaatttcc 37272228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 1661197 - 1661295
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||||||||||||||||| |||||||||||||| || |   ||||||||||||||  | | |||||| ||| ||||| ||||||  ||||||||||    
T  1661197 taactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagttttatctatccgatgtgggactaaatcca 1661294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 6783136 - 6783050
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| |||||||    
T  6783136 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtga 6783050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 40137702 - 40137763
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| | |||||||||||| ||||  ||||||||||||||||||    
T  40137702 taactcatccttacaaaaccggctcgtaaggtgaggagtgtctcttctttataaactcttat 40137763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 31374863 - 31374804
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  31374863 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 31374804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 29780245 - 29780146
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| |||| |||||||  |||||||||||||| ||||   ||||||||||||||  | | ||||||| || |||| |||||||| ||||||||||    
T  29780245 taactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactct--tctcaagagtcatatctatttgatgtgagactaaatcca 29780148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 2179743 - 2179667
Alignment:
Q  68 ttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||| || |||||||||||||||||||   ||||||||||||||| | | |||||||||| ||||| ||||||    
T  2179743 ttacaaaactggtttgtaaggtgaggattgtctcctctttataaactctt-tctcaagagtcttatctatccgatgtg 2179667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 8681982 - 8681897
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||||||||||||||||  || || | ||| ||||| |  |||||||||||||||  ||| |||||||||| ||||||||||||    
T  8681982 taactcattcttacaaaaccgacttatatgttgaagattgcctcttctttataaactct--tatcaagagtcttatctatctgatgtg 8681897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 9379089 - 9379008
Alignment:
Q  67 cttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaact 150  Q
    ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| |||||| ||||    
T  9379089 cttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtggaact 9379008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 43288630 - 43288533
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    ||||| || ||||||||||||| |||||||||||||| || |   ||||||||||||||  | | |||||||||| | | | ||||||||||||||||||    
T  43288630 taactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tgtcaagagtcttatcaaaccgatgtgaaactaaatcca 43288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 23396707 - 23396668
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  23396707 taactcatccttacaaaaccggcttgtaaggtgaggattg 23396668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 28910130 - 28910071
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  28910130 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 28910071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 43384286 - 43384345
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  43384286 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 43384345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 48116302 - 48116360
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| |||||||||||||| |||    ||||||||||||||    
T  48116302 taactcatccttacaaaaccggcttgtaaggtgaggagtgtgtcctctttataaactct 48116360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 6782912 - 6782838
Alignment:
Q  70 acaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| |||||||    
T  6782912 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtga 6782838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 7135249 - 7135347
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    ||||||||  |||||||||||| |||||||||||||| || |   ||||||||||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  7135249 taactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagtcctatctatccgatgtgtgactaaatcca 7135346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 14691162 - 14691109
Alignment:
Q  66 tcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    ||||||||||| || |||||||||||||| ||||   |||||||||||||||||    
T  14691162 tcttacaaaactggcttgtaaggtgaggagtgtctcctctttataaactcttat 14691109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 23821366 - 23821407
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||||| ||||||||||||| ||||||||||| |||||||    
T  23821366 taactcatccttacaaaaccggcttgtaaggtgatgattgtc 23821407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 33855789 - 33855728
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||||||||||||||||| |  ||||||||||| ||||   |||||||||||| ||||    
T  33855789 taactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattat 33855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 43288362 - 43288301
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||  ||||||||||||||||||||| |||||| || |   |||||||||||||||||    
T  43288362 taactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttat 43288301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 1663610 - 1663646
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  1663610 taactcatccttacaaaaccggcttgtaaggtgagga 1663646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 35866645 - 35866730
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||| |||| |||| |   ||| ||||||||||  ||| |||||||||| ||||| ||||||    
T  35866645 taactcatccttacaaaaccggcttgtaagttgagtattgccccctctatataaactct--tatcaagagtcttatctatccgatgtg 35866730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 36092398 - 36092434
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  36092398 taactcatccttacaaaaccggcttgtaaggtgagga 36092434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 41670931 - 41670895
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  41670931 taactcatccttacaaaaccggcttgtaaggtgagga 41670895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 218
Target Start/End: Complemental strand, 34248457 - 34248302
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||  ||| ||||||| || ||| |  |||||  |||||||||     
T  34248457 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tatcaagagtcctatctaaccaatgtgggactaaatcc- 34248361  T
Q  158 ctactccatcaaaaccaacccaaggcagcttaaatttcgcaattaggcgactagaggcgga 218  Q
      || || ||||| ||||| ||||||| || |||| |||||||||||||||||| ||||||    
T  34248360 --accccctcaaagccaacacaaggcaactcaaatgtcgcaattaggcgactaggggcgga 34248302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 34248175 - 34248033
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||  ||| ||||||| || ||| | ||||||  ||||||||||    
T  34248175 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tatcaagagtcctatctaaccgatgtgggactaaatcca 34248078  T
Q  158 ctactccatcaaaaccaacccaaggcagcttaaatttcgcaattagg 204  Q
    |  | || ||||| ||||| ||||||| || |||| |||||||||||    
T  34248077 c--ccccctcaaagccaacacaaggcaactcaaatgtcgcaattagg 34248033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 16454641 - 16454727
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | |||||||||||| ||||| |||||||    
T  16454641 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tcttaagagtcttatctatccgatgtga 16454727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 43599409 - 43599324
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  43599409 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 43599324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 10989040 - 10989099
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  10989040 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 10989099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 10989247 - 10989306
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  10989247 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 10989306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 15011035 - 15011094
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  15011035 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 15011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 20760666 - 20760725
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  20760666 taactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactctt 20760725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 36997264 - 36997203
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||||    
T  36997264 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttat 36997203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 8559679 - 8559594
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  8559679 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 8559594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 33435981 - 33435896
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||  |||||||||||| |||||||||||||||||||   | | ||||||||||  ||| |||||||||| ||||| ||||||    
T  33435981 taactcatctttacaaaaccggcttgtaaggtgaggattgtctcctttatataaactct--tatcaagagtcttatctatccgatgtg 33435896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 3183917 - 3183976
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    ||||||||  |||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  3183917 taactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 3183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 18905954 - 18905895
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  18905954 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 18905895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 22277622 - 22277563
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||| | ||||   |||||||||||||||    
T  22277622 taactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactctt 22277563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 32931499 - 32931440
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  32931499 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 32931440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 40902399 - 40902458
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    ||||| || ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  40902399 taacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 40902458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 42228869 - 42228810
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||| ||| ||||||||||||||||| |   |||||||||||||||    
T  42228869 taactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactctt 42228810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 41371170 - 41371229
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||| | | |||||||||||||| ||||  ||||||||||||||||||    
T  41371170 taactcatccttacaaaatcagtttgtaaggtgaggaatgtc--ttctttataaactcttat 41371229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 39125022 - 39124961
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    ||||||||||||||||||| || ||||||| |||||| || |   |||||||||||||||||    
T  39125022 taactcattcttacaaaactggcttgtaagatgaggagtgcctcctctttataaactcttat 39124961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 21653902 - 21653866
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  21653902 taactcatccttacaaaaccggcttgtaaggtgagga 21653866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 23027834 - 23027870
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  23027834 taactcattcttaaaaaaccggcttgtaaggtgagga 23027870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 36993953 - 36993989
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  36993953 taactcatccttacaaaaccggcttgtaaggtgagga 36993989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 24558886 - 24558800
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||| | |||||||||||||||||||   ||||||||||||||| ||  |||||||||| ||||| |||||||    
T  24558886 taactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactcttcta--aagagtcttatctatccgatgtga 24558800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 5269279 - 5269365
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| |||||||    
T  5269279 taactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactct--tctcaagagtcttatctatccgatgtga 5269365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 28149891 - 28149830
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||||    
T  28149891 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttat 28149830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 10733444 - 10733503
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| ||||   |||||||||||||||    
T  10733444 taactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactctt 10733503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 15101117 - 15101176
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  15101117 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 15101176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 16877016 - 16877075
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  16877016 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 16877075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 17147911 - 17147968
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactc 115  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||    
T  17147911 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactc 17147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 30539329 - 30539239
Alignment:
Q  62 tcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaat 154  Q
    |||| ||||||||||||| |||||||||||||| ||||    |||||||||||||  ||| |||||||||| ||||| ||||||  |||||||    
T  30539329 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactct--tatcaagagtcttatctatccgatgtgggactaaat 30539239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 16876836 - 16876892
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||    
T  16876836 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 16876892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 24558681 - 24558596
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| || |||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||||||||||    
T  24558681 taactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatctgatgtg 24558596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 1744848 - 1744907
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  1744848 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 1744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 8144115 - 8144056
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  8144115 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 8144056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 12134489 - 12134548
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||| |||| ||||   |||||||||||||||    
T  12134489 taactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactctt 12134548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 19054591 - 19054532
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  19054591 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactctt 19054532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 19712615 - 19712674
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||| | ||||||||||||||||| |   |||||||||||||||    
T  19712615 taactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactctt 19712674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 24055115 - 24055174
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  24055115 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactctt 24055174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 10418344 - 10418402
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||    
T  10418344 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 10418402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 22911496 - 22911537
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  22911496 taactcattcttacaaaaccgacttgtaaggtgaggagtgtc 22911537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 25184089 - 25184040
Alignment:
Q  70 acaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||||| ||||| |||||||||||||   |||||||||||||||||    
T  25184089 acaaaaccggcttgtacggtgaggattgtcttctctttataaactcttat 25184040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 25999121 - 25999060
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||||||||||||||||| |  ||||||||||| ||||   |||||||||||| ||||    
T  25999121 taactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattat 25999060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 26098852 - 26098791
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||||||||||||||||| |  ||||||||||| ||||   |||||||||||| ||||    
T  26098852 taactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattat 26098791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 11313388 - 11313473
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| |||||||||| || ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  11313388 taactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 11313473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 29256446 - 29256502
Alignment:
Q  56 aataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaa 112  Q
    |||||||||| |||||||||| |  |||||||||||||||||||   ||||||||||    
T  29256446 aataactcatccttacaaaactgatttgtaaggtgaggattgtctcatctttataaa 29256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 38376829 - 38376744
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| |||||||||||||||||||   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  38376829 taactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactct--tctcaagagtcttatctatccgatgtg 38376744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 28358041 - 28358100
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||||||||   |||||||||||||||    
T  28358041 taactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactctt 28358100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 38131862 - 38131763
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| ||||   ||||||||||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  38131862 taactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactct--tctcaagagtcctatctatccgatgtgggactaaatcca 38131765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 13413682 - 13413597
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| |||| |||||||    
T  13413682 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatttgatgtg 13413597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 35526994 - 35527079
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  35526994 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 35527079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 48110 - 48169
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  48110 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 48169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 35527280 - 35527366
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||| ||||||||| |  ||||||||||| ||||| ||||||    
T  35527280 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttct-ctaagagtcttagctatccgatgtg 35527366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 38663345 - 38663199
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| ||||||||||| || || |   ||||||||||||||  ||| ||||||| || ||  ||||||||  |||||||||     
T  38663345 taactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactct--tatcaagagtcctatcttactgatgtgggactaaatcc- 38663249  T
Q  158 ctactccatcaaaaccaacccaaggcagcttaaatttcgcaattaggcgact 209  Q
      || || ||||| ||||| | ||||| || |||| ||||||||||||||||    
T  38663248 --accccctcaaagccaacacgaggcaactcaaatgtcgcaattaggcgact 38663199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 18914374 - 18914415
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  18914374 taactcattcttacaaaaccagcttgtaaggtgaggattgtc 18914415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 37656738 - 37656824
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| |||||||    
T  37656738 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtga 37656824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 48317 - 48373
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||    
T  48317 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 48373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 2908568 - 2908624
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||    
T  2908568 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 2908775 - 2908831
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||    
T  2908775 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 3763004 - 3762919
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||| ||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  3763004 taactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 3762919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 24792128 - 24792184
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||||||||||||||||| ||||| |||||||| ||||   ||||||||||||    
T  24792128 taactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 24792184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 30330747 - 30330662
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||| ||||||||||   ||| ||||||||| ||||| ||||||    
T  30330747 taactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctatataaactct--aattcagagtcttatctatccgatgtg 30330662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 40169047 - 40169132
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| |||||||||||| |||| |   |||||||| |||||  | | |||||||||| ||||||||||||    
T  40169047 taactcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttatatactct--tctcaagagtcttatctatctgatgtg 40169132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 29432510 - 29432363
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||| | || |   ||||||||||||||  ||| ||||||| || ||| |  |||||  |||||||||     
T  29432510 taactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactct--tatcaagagtcctatctaaccaatgtgggactaaatcc- 29432414  T
Q  158 ctactccatcaaaaccaacccaaggcagcttaaatttcgcaattaggcgacta 210  Q
      || || ||||| ||||| | ||||| || |||| |||||||||||||||||    
T  29432413 --accccctcaaagccaacacgaggcaactcaaatgtcgcaattaggcgacta 29432363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 34457194 - 34457155
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  34457194 taactcatccttacaaaaccggcttgtaaggtgaggattg 34457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 37995640 - 37995699
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  37995640 taactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactctt 37995699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 43490469 - 43490528
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||| |||||||| ||||||   |||||||||||||||    
T  43490469 taactcatccttacaaaaccggcttggaaggtgagtattgtcttctctttataaactctt 43490528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 11632528 - 11632470
Alignment:
Q  59 aactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    ||||||| ||||||||||||| || |||||||||||||| |   |||||||||||||||    
T  11632528 aactcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactctt 11632470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 14769838 - 14769937
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||| ||||||||| ||||| |||||||| ||||   ||||||||||||||  | | |||| || || ||||| ||||||| ||||||||||    
T  14769838 taactcatcctttcaaaaccggcttgtacggtgaggagtgtctcgtctttataaactct--tctcaagaatcctatctatccgatgtgagactaaatcca 14769935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 24125160 - 24125122
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggatt 96  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  24125160 taactcatccttacaaaaccggcttgtaaggtgaggatt 24125122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 28156124 - 28156070
Alignment:
Q  62 tcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||    
T  28156124 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct 28156070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 36307929 - 36308018
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaact 150  Q
    |||||||| |||||||| |||| ||| ||||||||||||| |   |||||||||||||||   | |||||||||| ||||| |||||| ||||    
T  36307929 taactcatccttacaaatccggcttgcaaggtgaggattgactcctctttataaactctt---tcaagagtcttatctatccgatgtggaact 36308018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 13843795 - 13843697
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| ||||||||||||||  | |   ||||||||||||||  | | ||||||  || ||||||||||||  ||||||||||    
T  13843795 taactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactct--tctcaagagtactatctatctgatgtgggactaaatcca 13843698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 18914167 - 18914208
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  18914167 taactcattcttacaaaaccaacttgtaaggtgaggattgtc 18914208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 27760173 - 27760075
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||  ||||||||||||| |||||||||||||| || |  ||||||| |||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  27760173 taactcaaccttacaaaaccggcttgtaaggtgaggagtgcctcttctttagaaactct--tctcaagagtcctatctatccgatgtgggactaaatcca 27760076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 37781850 - 37781936
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||| | ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| |||||||    
T  37781850 taactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtga 37781936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 43490222 - 43490263
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  43490222 taactcatcctcacaaaaccggcttgtaaggtgaggattgtc 43490263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 43490273 - 43490347
Alignment:
Q  69 tacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||||| ||||||||||| |||||||   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  43490273 tacaaaaccggcttgtaaggtgaagattgtctcctctttataaactct--tctcaagagtcttatctatccgatgtg 43490347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 1892096 - 1892132
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  1892096 taactcatccttacaaaaccggcttgtaaggtgagga 1892132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 12965252 - 12965288
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  12965252 taactcatccttacaaaaccggcttgtaaggtgagga 12965288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 36878420 - 36878339
Alignment:
Q  62 tcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||| |||||||||  || |||||||||||||||||||   | ||||||||||||  ||| || ||||||| ||||||||||||    
T  36878420 tcatccttacaaaattggcttgtaaggtgaggattgtctcctgtttataaactct--tatcaaaagtcttatctatctgatgtg 36878339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 91
Target Start/End: Original strand, 38669986 - 38670014
Alignment:
Q  63 cattcttacaaaaccggattgtaaggtga 91  Q
    |||||||||||||||||||||||||||||    
T  38669986 cattcttacaaaaccggattgtaaggtga 38670014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 40168865 - 40168950
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||| | ||||||| ||||||||| |   |||||||| |||||  | | |||||||||| ||||||||||||    
T  40168865 taactcatccttacaaaaccagcttgtaagatgaggattgcctcctctttatatactct--tctcaagagtcttatctatctgatgtg 40168950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 19820534 - 19820593
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||||||||   |||||||||||||||    
T  19820534 taactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactctt 19820593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 50692624 - 50692563
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||||    
T  50692624 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttat 50692563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 39956680 - 39956765
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||  ||||||||||||    
T  39956680 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttgtctatctgatgtg 39956765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 49477632 - 49477547
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  49477632 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 49477547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 51338447 - 51338532
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||||||||||    
T  51338447 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatctgatgtg 51338532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 4191128 - 4191187
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||| |||||||||   |||||||||||||||    
T  4191128 taactcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttataaactctt 4191187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 11414461 - 11414402
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| || ||||||||||||||||   |||||||||||||||    
T  11414461 taactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactctt 11414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 39078777 - 39078836
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  39078777 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 39078836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 50692421 - 50692362
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  50692421 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 50692362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 54495620 - 54495544
Alignment:
Q  67 cttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||||||| |||||||||||||||||||   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  54495620 cttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactct--tctcaagagtcttatctatccgatgtg 54495544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 1737055 - 1736994
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||||||||||||||||| | ||||||||| || |||||  |||||||||| ||||||    
T  1737055 taactcattcttacaaaaccggttagtaaggtgatgagtgtcatgtctttataaattcttat 1736994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 50203863 - 50203961
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| || ||||||||||| || |   ||||||||||||||  | | |||||||||| ||||| ||||||| |||||| |||    
T  50203863 taactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactct--tctcaagagtcttatctatccgatgtgagactaaaccca 50203960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 50338388 - 50338470
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgat 142  Q
    |||||||  ||||||||||||| ||||||||||| |||||||   ||| ||||||||||  ||| |||||||||| |||||||||    
T  50338388 taactcaaccttacaaaaccggcttgtaaggtgaagattgtctcctctatataaactct--tatcaagagtcttatctatctgat 50338470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 53640177 - 53640263
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||| |||||| |||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||||||||||    
T  53640177 ataactcatccttacataaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatctgatgtg 53640263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 4029650 - 4029735
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||| ||||||    ||||||||||||||  | | |||||||||| ||||| ||||||    
T  4029650 taactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactct--tctcaagagtcttatctatccgatgtg 4029735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 9264092 - 9264177
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  9264092 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 9264177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 34715460 - 34715520
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    ||||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  34715460 ataactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 34715520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 39956477 - 39956558
Alignment:
Q  62 tcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||| |||||||||| || |||||||||||||||||||   ||||||||||||||  | |||||| ||||  ||||||||||||    
T  39956477 tcatccttacaaaactggcttgtaaggtgaggattgtctcctctttataaactct--tcttaagattcttgtctatctgatgtg 39956558  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 43101378 - 43101475
Alignment:
Q  59 aactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatccac 158  Q
    ||||||| ||||||||||||  |||||||||||||| || |   ||||||||||||||  | | ||||||| || ||||||||||||  |||||||||||    
T  43101378 aactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagtcctatctatctgatgtgggactaaatccac 43101475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 49477425 - 49477369
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||    
T  49477425 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 49477369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 51642641 - 51642726
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  51642641 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 51642726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 9264299 - 9264338
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  9264299 taactcatccttacaaaaccggcttgtaaggtgaggattg 9264338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 22339839 - 22339780
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||  ||||||||||||||||| |   |||||||||||||||    
T  22339839 taactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactctt 22339780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 44573737 - 44573678
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  44573737 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 44573678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 44574034 - 44573975
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  44574034 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 44573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 51642434 - 51642473
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  51642434 taactcatccttacaaaaccggcttgtaaggtgaggattg 51642473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 54591471 - 54591510
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  54591471 taactcatgcttacaaaaccggcttgtaaggtgaggattg 54591510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 37058777 - 37058815
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggatt 96  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  37058777 taactcatccttacaaaaccggtttgtaaggtgaggatt 37058815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 40230645 - 40230703
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||  ||||||||||||| ||||||||||||||||| |   ||||||||||||||    
T  40230645 taactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct 40230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 45941336 - 45941397
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    ||||||||| ||||||||||||| ||||||||||||   || || ||||||||||||||||||    
T  45941336 ataactcatccttacaaaaccggcttgtaaggtgagagatg-catttctttataaactcttat 45941397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 14170004 - 14170041
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgagga 94  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  14170004 ataactcatccttacaaaaccggcttgtaaggtgagga 14170041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 34356847 - 34356884
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgagga 94  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  34356847 ataactcatccttacaaaaccggcttgtaaggtgagga 34356884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 48407584 - 48407547
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgagga 94  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  48407584 ataactcatccttacaaaaccggcttgtaaggtgagga 48407547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 53639977 - 53640010
Alignment:
Q  64 attcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||||||||||| |||||||||||||||||    
T  53639977 attcttacaaaaccggcttgtaaggtgaggattg 53640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 3985871 - 3985835
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  3985871 taactcatccttacaaaaccggcttgtaaggtgagga 3985835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 9264506 - 9264591
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| |||||| |||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  9264506 taactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 9264591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 10453709 - 10453745
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  10453709 taactcatccttacaaaaccggcttgtaaggtgagga 10453745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 21832205 - 21832261
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||| ||||||||||||| |||| |||||||||||| |   ||||||||||||    
T  21832205 taactcatccttacaaaaccggcttgtgaggtgaggattgcctcatctttataaact 21832261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 22407447 - 22407483
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  22407447 taactcatccttacaaaaccggcttgtaaggtgagga 22407483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 22407654 - 22407690
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  22407654 taactcatccttacaaaaccggcttgtaaggtgagga 22407690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 26927004 - 26926920
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| |||| |||||||| |  ||||||||||||||||   ||| ||||||||||  ||| |||||||||| ||||||||||||    
T  26927004 taactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactct--tatcaagagtcttatctatctgatgtg 26926920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 37223836 - 37223804
Alignment:
Q  65 ttcttacaaaaccggattgtaaggtgaggattg 97  Q
    ||||||||||||||| |||||||||||||||||    
T  37223836 ttcttacaaaaccggcttgtaaggtgaggattg 37223804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 51338409 - 51338445
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  51338409 taactcatccttacaaaaccggcttgtaaggtgagga 51338445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 883606 - 883692
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  883606 ataactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 883692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 12431993 - 12431911
Alignment:
Q  61 ctcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||| ||||||||||||| |||||||||||||||||||   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  12431993 ctcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactct--tctcaagagtcttatctatccgatgtg 12431911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 17727502 - 17727417
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  17727502 taactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactct--tctcaagagtcttatctatccgatgtg 17727417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 27545122 - 27545207
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  27545122 taactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 27545207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 32667281 - 32667196
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||| ||||||| |   ||| ||||||||||  ||| |||||||||| ||||||||||||    
T  32667281 taactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactct--tatcaagagtcttatctatctgatgtg 32667196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 883948 - 883889
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |  | ||||||||||||||    
T  883948 taactcatccttacaaaaccggcttgtaaggtgaggattgcctctcctttataaactctt 883889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 20998995 - 20999054
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  20998995 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 20999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 10429837 - 10429776
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| ||||||| |||||| ||||   |||||||||||||||||    
T  10429837 taactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaactcttat 10429776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 28895624 - 28895564
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||||| |||||||||||||| ||||  || |||||||||||||||    
T  28895624 taactcatccttacaaaaccggcttgtaaggtgaggagtgtctctt-tttataaactcttat 28895564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 3435492 - 3435577
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   ||| ||||||||||  | | |||||||||| ||||| ||||||    
T  3435492 taactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaactct--tctcaagagtcttatctatccgatgtg 3435577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 25441794 - 25441697
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||  | | ||||||  || ||||||||||||  ||||||||||    
T  25441794 taactcatccttacaaaaccggcttgtaaggtgaggagtgccccctctttataaactct--tctcaagagtactatctatctgatgtgggactaaatcca 25441697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 31761429 - 31761344
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||| ||| ||||||||||||||||| |   ||| ||||||||||  |||||||||||||| ||| | ||||||    
T  31761429 taactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctatataaactct--tattaagagtcttatctacccgatgtg 31761344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 3976477 - 3976536
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  3976477 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 3976536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 6183372 - 6183431
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||| | ||||   |||||||||||||||    
T  6183372 taactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactctt 6183431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 7877938 - 7877883
Alignment:
Q  62 tcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||| ||||||||||||| |||||||||||||| ||||   |||||||||||||||    
T  7877938 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactctt 7877883  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 11969150 - 11969091
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  11969150 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 11969091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 21214207 - 21214266
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  21214207 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 21214266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 33985777 - 33985816
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  33985777 taactcatccttacaaaaccggcttgtaaggtgaggattg 33985816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 34775455 - 34775416
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  34775455 taactcatccttacaaaaccggcttgtaaggtgaggattg 34775416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 39108316 - 39108277
Alignment:
Q  60 actcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  39108316 actcatccttacaaaaccggcttgtaaggtgaggattgtc 39108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 42768340 - 42768399
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  42768340 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 42768399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 43195882 - 43195823
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  43195882 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 43195823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 16007075 - 16007037
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggatt 96  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  16007075 taactcatccttacaaaaccggcttgtaaggtgaggatt 16007037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 18901873 - 18901968
Alignment:
Q  61 ctcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatccac 158  Q
    |||||||||||||||| || ||||||||||| || || |   ||||||||||||||  | | |||||||||| ||||| ||||||  |||||||||||    
T  18901873 ctcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactct--tttcaagagtcttatctatccgatgtgggactaaatccac 18901968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 21213892 - 21213950
Alignment:
Q  59 aactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    ||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  21213892 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 21213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 25286266 - 25286324
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| |||||||||||||| |||    ||||||||||||||    
T  25286266 taactcatccttacaaaaccggcttgtaaggtgaggagtgtttcctctttataaactct 25286324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 10542069 - 10542130
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| ||||||||||| | ||||||| |||||| ||||   |||||||||||||||||    
T  10542069 taactcatccttacaaaaccagcttgtaagatgaggagtgtctcctctttataaactcttat 10542130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 10849497 - 10849595
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| |||||||||||   |||||||||||||| || |   ||||||||||||||  ||| ||||| | || |||||||| ||| |||||||||||    
T  10849497 taactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactct--tatcaagagccctatctatctgaagtggaactaaatcca 10849594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 13839277 - 13839355
Alignment:
Q  70 acaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaact 150  Q
    |||||||||||||||||||||||||||| |   |||||| |||||||  | | |||||||||  ||||| |||||||||||    
T  13839277 acaaaaccggattgtaaggtgaggattgcctcatctttagaaactct--tctcaagagtcttgtctatccgatgtgaaact 13839355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 23054424 - 23054326
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| ||||||||||||  |||||||||||||| || |   ||||||||||||||  | | ||||||  || ||||||||||||  ||||||||||    
T  23054424 taactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagttatatctatctgatgtgggactaaatcca 23054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 25621291 - 25621377
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtga 146  Q
    |||||||| ||||||||||||| ||||||||||||| ||||    |||||||| |||||  | | |||||||||| ||||| |||||||    
T  25621291 taactcatccttacaaaaccggcttgtaaggtgagggttgtttcctctttatatactct--tctcaagagtcttatctatccgatgtga 25621377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 32810894 - 32810943
Alignment:
Q  70 acaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||||| ||||||||||| |||||||   |||||||||||||||||    
T  32810894 acaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttat 32810943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 33145672 - 33145705
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtga 91  Q
    |||||||||||||||||||||| |||||||||||    
T  33145672 taactcattcttacaaaaccggcttgtaaggtga 33145705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 39108453 - 39108412
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||||| ||||||||||||| || ||||||||||||||||    
T  39108453 taactcatccttacaaaaccggtttataaggtgaggattgtc 39108412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 39596712 - 39596773
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| || ||||||||||||||||||| ||||| || |   |||||||||||||||||    
T  39596712 taactcatcctcacaaaaccggattgtaaggcgaggagtgcctcctctttataaactcttat 39596773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 93144 - 93180
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  93144 taactcatccttacaaaaccggcttgtaaggtgagga 93180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 902021 - 901985
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  902021 taactcatccttacaaaaccggcttgtaaggtgagga 901985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 5424788 - 5424824
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  5424788 taactcatccttacaaaaccggcttgtaaggtgagga 5424824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 39649089 - 39649175
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  39649089 ataactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 39649175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 43361558 - 43361617
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  43361558 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 43361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 5222792 - 5222707
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| |||| |||||||| |||||||||||||||||||   |||  |||||||||  ||| |||||||||| ||||| ||||||    
T  5222792 taactcatccttataaaaccggcttgtaaggtgaggattgtctcctctacataaactct--tatcaagagtcttatctatcagatgtg 5222707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 52846855 - 52846940
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| ||||||||||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  52846855 taactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 52846940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 8520099 - 8520158
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    ||||||||  |||||||||||| |||||||||||||| || |  ||||||||||||||||    
T  8520099 taactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactctt 8520158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 17419885 - 17419826
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  17419885 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 17419826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 19937049 - 19937108
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  19937049 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 19937108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 26366838 - 26366877
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  26366838 taactcatccttacaaaaccggcttgtaaggtgaggattg 26366877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 29272913 - 29272952
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  29272913 taactcatccttacaaaaccggcttgtaaggtgaggattg 29272952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 29273072 - 29273111
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  29273072 taactcatccttacaaaaccggcttgtaaggtgaggattg 29273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 29273231 - 29273270
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  29273231 taactcatccttacaaaaccggcttgtaaggtgaggattg 29273270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 31305809 - 31305750
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  31305809 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 31305750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 38474381 - 38474322
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| ||||||||||||| |||||||||||||| || |   |||||||||||||||    
T  38474381 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 38474322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 43361763 - 43361802
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  43361763 taactcatccttacaaaaccggcttgtaaggtgaggattg 43361802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 48558327 - 48558366
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattg 97  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  48558327 taactcatccttacaaaaccggcttgtaaggtgaggattg 48558366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 20735853 - 20735795
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| ||||||||||||| |||||||||||||| || |   ||||||||||||||    
T  20735853 taactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 20735795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 21538822 - 21538864
Alignment:
Q  57 ataactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||| |||| ||||||||||||| |||||||||||||||||||    
T  21538822 ataaatcatccttacaaaaccggcttgtaaggtgaggattgtc 21538864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 22892439 - 22892497
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactct 116  Q
    |||||||| |||||||||||||||||| ||||||||| || |   ||||||||||||||    
T  22892439 taactcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactct 22892497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 2697337 - 2697435
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||| | ||||||||||||| |||||||||||||| || |   ||||||||||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  2697337 taactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagtcctatctatccgatgtgggactaaatcca 2697434  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 4022131 - 4022229
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||||||| |||||||||| || |||||||||||||| || |   ||||||||||||||  | | ||||||| || ||||| ||||||  ||||||||||    
T  4022131 taactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactct--tctcaagagtcctatctatccgatgtgggactaaatcca 4022228  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 21428064 - 21428125
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| || |||||||||| ||||||||| ||||||||||  | | |||||||||||||    
T  21428064 taactcatcctcacaaaaccggtttgtaaggtaaggattgtcacctttatataaactcttat 21428125  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 40664308 - 40664210
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtgaaactaaatcca 157  Q
    |||| ||| ||||||||||||| |||||||| ||||| || |   ||||||||||||||  ||| ||||||| || ||| | ||||||| ||||||||||    
T  40664308 taacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactct--tatcaagagtcctatctaaccgatgtgagactaaatcca 40664211  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 463089 - 463125
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  463089 taactcatccttacaaaaccggcttgtaaggtgagga 463125  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 2104266 - 2104302
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  2104266 taactcatccttacaaaaccggcttgtaaggtgagga 2104302  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 11149429 - 11149465
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  11149429 taactcatccttacaaaaccggcttgtaaggtgagga 11149465  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 15013623 - 15013567
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    ||||||||| |||||||||||| |||||||||||| | ||||   ||||||||||||    
T  15013623 taactcatttttacaaaaccggcttgtaaggtgagaagtgtcttctctttataaact 15013567  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 15392123 - 15392038
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    |||||||| ||||||||||||| |||||| |||||||||| |   |||||||| |||||  | | |||||||||| ||||| ||||||    
T  15392123 taactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactct--tctcaagagtcttatctatccgatgtg 15392038  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 20735620 - 20735584
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  20735620 taactcatccttacaaaaccggcttgtaaggtgagga 20735584  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 36332210 - 36332174
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  36332210 taactcatccttacaaaaccggcttgtaaggtgagga 36332174  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 45264760 - 45264724
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgagga 94  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  45264760 taactcatccttacaaaaccggcttgtaaggtgagga 45264724  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 34511 - 34567
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaact 114  Q
    |||||||||||||||||||||| ||||| |||||||| ||||   ||||||||||||    
T  34511 taactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 34567  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 76950 - 76865
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttatattaagagtcttacctatctgatgtg 145  Q
    ||||||||  |||||||||||| ||||||||||||||||| |   ||||||||||||||  | | |||||||||| ||||| ||||||    
T  76950 taactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct--tctcaagagtcttatctatccgatgtg 76865  T

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Target: scaffold0434 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 13404 - 13345
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactctt 117  Q
    |||||||| || |||||||||| ||||||||||||||||| |   |||||||||||||||    
T  13404 taactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 13345  T

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Target: scaffold0419 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 4245 - 4283
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggatt 96  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  4245 taactcatccttacaaaaccggcttgtaaggtgaggatt 4283  T

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Target: scaffold1138 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 2085 - 2146
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtcaattctttataaactcttat 119  Q
    |||||||| |||||||||| || ||||||||||||||||| |   ||| |||||||||||||    
T  2085 taactcatccttacaaaactggcttgtaaggtgaggattgcctcctctatataaactcttat 2146  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 11349 - 11390
Alignment:
Q  58 taactcattcttacaaaaccggattgtaaggtgaggattgtc 99  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  11349 taactcattcttacaaaaccgacttgtaaggtgaggagtgtc 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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