View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3630_low_1 (Length: 944)

Name: NF3630_low_1
Description: NF3630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3630_low_1
NF3630_low_1
[»] chr7 (65 HSPs)
chr7 (14-520)||(38138265-38138771)
chr7 (730-926)||(38139006-38139202)
chr7 (574-726)||(38138826-38138978)
chr7 (221-371)||(420287-420437)
chr7 (224-382)||(19302559-19302713)
chr7 (286-428)||(9210498-9210639)
chr7 (224-302)||(19022581-19022659)
chr7 (224-310)||(39629953-39630039)
chr7 (219-315)||(34744011-34744107)
chr7 (224-363)||(45338384-45338522)
chr7 (224-427)||(30570927-30571122)
chr7 (224-309)||(11619154-11619239)
chr7 (226-427)||(18865050-18865249)
chr7 (221-269)||(3928003-3928051)
chr7 (226-298)||(19214404-19214476)
chr7 (245-369)||(31744238-31744362)
chr7 (287-428)||(46078017-46078160)
chr7 (240-315)||(46280284-46280359)
chr7 (328-430)||(21568728-21568830)
chr7 (224-429)||(48469919-48470118)
chr7 (348-429)||(3308372-3308453)
chr7 (253-357)||(43694595-43694693)
chr7 (283-428)||(45263963-45264110)
chr7 (277-401)||(45806526-45806650)
chr7 (254-425)||(4970819-4970985)
chr7 (225-296)||(21196271-21196342)
chr7 (241-345)||(20258465-20258569)
chr7 (241-345)||(20269529-20269633)
chr7 (224-292)||(21568491-21568559)
chr7 (224-335)||(33601406-33601516)
chr7 (224-428)||(38499909-38500118)
chr7 (326-428)||(23989582-23989684)
chr7 (231-309)||(27863728-27863806)
chr7 (219-305)||(28341048-28341133)
chr7 (224-310)||(49019856-49019942)
chr7 (359-428)||(33128627-33128696)
chr7 (366-427)||(33678663-33678724)
chr7 (224-305)||(45790422-45790502)
chr7 (161-229)||(20526528-20526596)
chr7 (224-268)||(27566690-27566734)
chr7 (361-428)||(19131240-19131307)
chr7 (339-401)||(20428364-20428426)
chr7 (163-291)||(529382-529510)
chr7 (162-231)||(18765364-18765433)
chr7 (229-310)||(28614421-28614502)
chr7 (359-424)||(33552942-33553007)
chr7 (226-310)||(45593515-45593600)
chr7 (359-428)||(46139822-46139891)
chr7 (224-320)||(17944339-17944435)
chr7 (240-320)||(38639992-38640072)
chr7 (254-333)||(12110325-12110404)
chr7 (224-331)||(15309562-15309668)
chr7 (224-315)||(33602023-33602113)
chr7 (246-333)||(33678745-33678832)
chr7 (227-310)||(40377851-40377934)
chr7 (238-305)||(40439047-40439114)
chr7 (255-345)||(11700293-11700383)
chr7 (156-229)||(17942152-17942226)
chr7 (228-310)||(40252107-40252189)
chr7 (246-300)||(40530427-40530481)
chr7 (224-269)||(20428503-20428548)
chr7 (235-300)||(39967918-39967983)
chr7 (246-315)||(44821942-44822011)
chr7 (374-427)||(47795838-47795891)
chr7 (285-369)||(48140145-48140227)
[»] chr4 (56 HSPs)
chr4 (226-427)||(50681087-50681288)
chr4 (229-369)||(54069418-54069558)
chr4 (224-315)||(7839357-7839448)
chr4 (226-427)||(50662736-50662921)
chr4 (156-333)||(39691064-39691248)
chr4 (224-401)||(41336658-41336834)
chr4 (224-428)||(46592205-46592410)
chr4 (225-428)||(44797762-44797960)
chr4 (224-353)||(21731652-21731778)
chr4 (224-369)||(54425974-54426117)
chr4 (256-428)||(17204008-17204180)
chr4 (224-399)||(55414416-55414591)
chr4 (224-354)||(2243993-2244125)
chr4 (224-310)||(46588069-46588156)
chr4 (223-369)||(33586950-33587095)
chr4 (224-305)||(17822861-17822942)
chr4 (286-428)||(25904268-25904414)
chr4 (224-421)||(15173299-15173493)
chr4 (230-368)||(15177204-15177342)
chr4 (224-382)||(22030120-22030277)
chr4 (223-357)||(29388555-29388689)
chr4 (271-369)||(31076429-31076527)
chr4 (219-292)||(44862975-44863048)
chr4 (224-296)||(39603166-39603238)
chr4 (273-369)||(42404043-42404139)
chr4 (359-427)||(44863083-44863151)
chr4 (224-363)||(9760375-9760516)
chr4 (233-315)||(53294119-53294201)
chr4 (307-427)||(43505829-43505947)
chr4 (224-309)||(55302238-55302323)
chr4 (224-303)||(41512646-41512725)
chr4 (228-401)||(18425710-18425882)
chr4 (228-297)||(40831030-40831098)
chr4 (293-429)||(19494783-19494919)
chr4 (203-307)||(42121479-42121581)
chr4 (224-310)||(11347766-11347853)
chr4 (234-357)||(20108950-20109073)
chr4 (237-315)||(2996556-2996634)
chr4 (235-333)||(17884033-17884131)
chr4 (224-266)||(24169295-24169337)
chr4 (224-269)||(13126572-13126617)
chr4 (373-429)||(27028-27084)
chr4 (238-310)||(16199991-16200063)
chr4 (379-427)||(47119086-47119134)
chr4 (246-353)||(3155548-3155655)
chr4 (382-425)||(39603585-39603628)
chr4 (232-267)||(56249555-56249590)
chr4 (359-401)||(23277320-23277362)
chr4 (224-425)||(44138442-44138633)
chr4 (275-369)||(45935268-45935361)
chr4 (224-289)||(26861-26925)
chr4 (224-257)||(13216207-13216240)
chr4 (224-269)||(25904219-25904264)
chr4 (224-292)||(43505940-43506009)
chr4 (246-351)||(51630058-51630163)
chr4 (224-269)||(55064864-55064909)
[»] chr2 (53 HSPs)
chr2 (228-422)||(32592463-32592656)
chr2 (224-428)||(43279525-43279729)
chr2 (224-401)||(26201925-26202102)
chr2 (169-366)||(39073630-39073827)
chr2 (234-429)||(12464479-12464674)
chr2 (223-310)||(20952343-20952430)
chr2 (224-428)||(15757654-15757866)
chr2 (223-351)||(11201376-11201505)
chr2 (224-428)||(41407171-41407376)
chr2 (224-425)||(41851408-41851609)
chr2 (153-401)||(42868393-42868634)
chr2 (223-364)||(12194885-12195027)
chr2 (223-364)||(12289730-12289872)
chr2 (224-428)||(39659505-39659708)
chr2 (237-401)||(41241141-41241305)
chr2 (224-381)||(45229429-45229585)
chr2 (290-428)||(15305526-15305665)
chr2 (224-315)||(5745781-5745872)
chr2 (223-269)||(20926532-20926578)
chr2 (224-314)||(24100910-24101002)
chr2 (238-401)||(33319822-33319986)
chr2 (215-427)||(38010283-38010495)
chr2 (293-428)||(42659216-42659351)
chr2 (338-428)||(1633656-1633746)
chr2 (234-288)||(23956038-23956092)
chr2 (373-427)||(43570297-43570351)
chr2 (229-426)||(12795664-12795860)
chr2 (224-269)||(15305703-15305748)
chr2 (256-369)||(20933684-20933797)
chr2 (237-302)||(40279403-40279468)
chr2 (274-345)||(6541747-6541817)
chr2 (224-369)||(2227095-2227240)
chr2 (374-427)||(9395011-9395064)
chr2 (347-428)||(11863801-11863882)
chr2 (246-311)||(14364197-14364262)
chr2 (253-310)||(27695620-27695677)
chr2 (230-287)||(36125372-36125429)
chr2 (224-369)||(41812088-41812231)
chr2 (224-320)||(1625878-1625974)
chr2 (336-427)||(31744237-31744326)
chr2 (224-267)||(42420219-42420263)
chr2 (235-302)||(40279263-40279330)
chr2 (235-302)||(40279333-40279400)
chr2 (290-353)||(42420356-42420419)
chr2 (238-315)||(1810648-1810724)
chr2 (173-218)||(9174908-9174953)
chr2 (224-269)||(10258708-10258753)
chr2 (364-425)||(16451021-16451082)
chr2 (359-428)||(19608746-19608815)
chr2 (224-265)||(33981155-33981196)
chr2 (235-320)||(40279175-40279260)
chr2 (224-269)||(40682391-40682436)
chr2 (359-428)||(40682494-40682563)
[»] chr3 (55 HSPs)
chr3 (234-417)||(39980610-39980793)
chr3 (226-427)||(35959454-35959655)
chr3 (224-428)||(20880347-20880550)
chr3 (224-398)||(36631047-36631221)
chr3 (233-428)||(20170393-20170588)
chr3 (261-427)||(30956659-30956825)
chr3 (261-427)||(30972471-30972637)
chr3 (173-315)||(47132314-47132454)
chr3 (224-334)||(30443857-30443967)
chr3 (224-428)||(53789457-53789661)
chr3 (224-314)||(13715568-13715660)
chr3 (224-401)||(4400943-4401118)
chr3 (224-301)||(46478684-46478763)
chr3 (228-400)||(12862256-12862419)
chr3 (224-382)||(37689149-37689303)
chr3 (237-310)||(901912-901985)
chr3 (233-304)||(4526373-4526444)
chr3 (226-320)||(20257513-20257608)
chr3 (274-428)||(24684869-24685023)
chr3 (341-426)||(1508694-1508779)
chr3 (232-428)||(3845566-3845762)
chr3 (224-322)||(49556833-49556932)
chr3 (228-310)||(18405831-18405913)
chr3 (238-292)||(35696244-35696298)
chr3 (224-265)||(31365184-31365225)
chr3 (347-428)||(31365391-31365472)
chr3 (224-333)||(36189531-36189639)
chr3 (256-345)||(49034291-49034380)
chr3 (265-401)||(29520516-29520651)
chr3 (223-291)||(35394493-35394561)
chr3 (373-428)||(47132247-47132302)
chr3 (224-298)||(21367667-21367741)
chr3 (241-311)||(50600191-50600261)
chr3 (232-345)||(1816536-1816649)
chr3 (224-305)||(51929353-51929434)
chr3 (161-229)||(584128-584196)
chr3 (265-369)||(5331223-5331326)
chr3 (224-264)||(26911619-26911659)
chr3 (221-269)||(43015617-43015665)
chr3 (235-298)||(36887504-36887567)
chr3 (253-379)||(583965-584091)
chr3 (227-269)||(28795852-28795894)
chr3 (390-428)||(42747913-42747951)
chr3 (224-269)||(944591-944636)
chr3 (224-269)||(19983804-19983848)
chr3 (217-266)||(25925774-25925822)
chr3 (226-347)||(26878068-26878189)
chr3 (239-308)||(26990502-26990571)
chr3 (173-222)||(31365120-31365169)
chr3 (224-269)||(35574864-35574908)
chr3 (225-278)||(43062711-43062764)
chr3 (238-307)||(44747418-44747487)
chr3 (374-423)||(47249604-47249653)
chr3 (247-316)||(47587450-47587519)
chr3 (257-306)||(49092771-49092820)
[»] chr1 (85 HSPs)
chr1 (230-428)||(1510312-1510509)
chr1 (224-380)||(42174775-42174929)
chr1 (224-427)||(3234011-3234222)
chr1 (224-428)||(14576650-14576853)
chr1 (224-320)||(17603380-17603476)
chr1 (224-310)||(49938735-49938821)
chr1 (231-427)||(1509623-1509818)
chr1 (224-354)||(24915047-24915177)
chr1 (224-369)||(51929535-51929681)
chr1 (229-429)||(473035-473233)
chr1 (231-354)||(47432040-47432162)
chr1 (224-427)||(51688576-51688778)
chr1 (224-310)||(36872720-36872805)
chr1 (224-345)||(41184646-41184767)
chr1 (232-428)||(41195197-41195394)
chr1 (229-401)||(18556824-18556994)
chr1 (251-426)||(33541731-33541906)
chr1 (231-362)||(36872204-36872332)
chr1 (220-310)||(36872576-36872666)
chr1 (230-310)||(33546455-33546535)
chr1 (272-428)||(41505557-41505712)
chr1 (226-427)||(17830025-17830222)
chr1 (338-428)||(5741532-5741622)
chr1 (273-382)||(14385808-14385917)
chr1 (224-301)||(30286515-30286592)
chr1 (227-380)||(37631558-37631711)
chr1 (227-303)||(43230769-43230845)
chr1 (223-333)||(13809963-13810073)
chr1 (235-428)||(27820344-27820530)
chr1 (224-385)||(27976508-27976678)
chr1 (235-333)||(34290201-34290299)
chr1 (303-428)||(14331659-14331784)
chr1 (223-315)||(27970289-27970382)
chr1 (230-306)||(5709619-5709694)
chr1 (340-428)||(17727207-17727295)
chr1 (238-354)||(30581746-30581861)
chr1 (338-428)||(5720851-5720941)
chr1 (227-353)||(7862023-7862149)
chr1 (237-299)||(26779934-26779996)
chr1 (224-301)||(36872425-36872500)
chr1 (342-428)||(38247324-38247409)
chr1 (359-428)||(5894284-5894353)
chr1 (224-320)||(6556949-6557046)
chr1 (232-357)||(26678844-26678968)
chr1 (357-426)||(27146367-27146436)
chr1 (225-298)||(38503462-38503535)
chr1 (224-428)||(37473269-37473477)
chr1 (389-428)||(34795565-34795604)
chr1 (224-267)||(37517162-37517205)
chr1 (272-354)||(30581992-30582074)
chr1 (221-310)||(40977396-40977486)
chr1 (224-269)||(2295125-2295170)
chr1 (226-315)||(7107516-7107604)
chr1 (224-269)||(15477594-15477639)
chr1 (224-269)||(29904780-29904825)
chr1 (235-300)||(37842362-37842427)
chr1 (359-428)||(47498964-47499033)
chr1 (246-310)||(10809333-10809397)
chr1 (173-249)||(33204326-33204402)
chr1 (235-310)||(7137005-7137080)
chr1 (237-296)||(11893200-11893259)
chr1 (232-315)||(12287196-12287279)
chr1 (173-256)||(14385725-14385808)
chr1 (154-229)||(39976123-39976198)
chr1 (235-310)||(45975678-45975753)
chr1 (235-305)||(7218081-7218151)
chr1 (291-341)||(15477535-15477585)
chr1 (359-401)||(17834157-17834199)
chr1 (391-429)||(24562466-24562504)
chr1 (224-298)||(27146251-27146325)
chr1 (373-427)||(30581683-30581737)
chr1 (375-428)||(35058893-35058947)
chr1 (224-262)||(42575465-42575503)
chr1 (256-428)||(44931960-44932132)
chr1 (224-269)||(341476-341521)
chr1 (226-310)||(596162-596247)
chr1 (359-428)||(1829075-1829144)
chr1 (224-269)||(3887628-3887673)
chr1 (249-306)||(5709561-5709618)
chr1 (221-310)||(10799450-10799538)
chr1 (359-428)||(22343958-22344027)
chr1 (254-291)||(34795451-34795488)
chr1 (273-378)||(37517239-37517344)
chr1 (244-345)||(37769676-37769777)
chr1 (338-423)||(42391241-42391326)
[»] chr5 (47 HSPs)
chr5 (224-424)||(25461643-25461842)
chr5 (224-427)||(25460963-25461165)
chr5 (224-393)||(16457975-16458143)
chr5 (224-333)||(16937879-16937988)
chr5 (224-357)||(29925782-29925915)
chr5 (233-428)||(13697764-13697959)
chr5 (225-427)||(24030398-24030601)
chr5 (227-308)||(32009682-32009764)
chr5 (244-369)||(36227724-36227848)
chr5 (224-295)||(37954689-37954760)
chr5 (286-427)||(32372495-32372636)
chr5 (277-428)||(32941341-32941485)
chr5 (224-310)||(12857334-12857420)
chr5 (326-428)||(25461853-25461955)
chr5 (224-288)||(12857701-12857765)
chr5 (224-427)||(10639825-10640027)
chr5 (246-341)||(12425528-12425623)
chr5 (359-430)||(28776853-28776924)
chr5 (152-333)||(34102224-34102419)
chr5 (374-427)||(3520302-3520355)
chr5 (224-329)||(12554488-12554592)
chr5 (173-222)||(42100400-42100449)
chr5 (228-281)||(42500242-42500294)
chr5 (225-310)||(43300866-43300951)
chr5 (233-320)||(17652239-17652326)
chr5 (230-368)||(41197577-41197716)
chr5 (223-354)||(35445999-35446130)
chr5 (373-428)||(40426632-40426687)
chr5 (224-298)||(3735154-3735228)
chr5 (317-427)||(12554334-12554444)
chr5 (244-310)||(27298061-27298127)
chr5 (224-428)||(9202744-9202938)
chr5 (326-427)||(26005336-26005437)
chr5 (257-401)||(34458539-34458684)
chr5 (235-315)||(6587114-6587194)
chr5 (347-431)||(7319130-7319214)
chr5 (233-345)||(23994721-23994832)
chr5 (228-356)||(32022013-32022141)
chr5 (224-320)||(39105442-39105538)
chr5 (337-428)||(3735600-3735691)
chr5 (235-305)||(15309000-15309070)
chr5 (359-430)||(36797207-36797278)
chr5 (235-297)||(4014431-4014493)
chr5 (224-269)||(3932672-3932717)
chr5 (388-429)||(32009577-32009618)
chr5 (379-428)||(36145202-36145251)
chr5 (388-429)||(42500369-42500410)
[»] chr8 (42 HSPs)
chr8 (224-369)||(16825534-16825678)
chr8 (229-429)||(12976085-12976281)
chr8 (224-401)||(10758253-10758429)
chr8 (224-428)||(28763243-28763442)
chr8 (239-427)||(38750229-38750417)
chr8 (224-354)||(26771209-26771339)
chr8 (173-310)||(9130251-9130388)
chr8 (227-421)||(15180418-15180611)
chr8 (224-428)||(35534609-35534809)
chr8 (224-320)||(18133634-18133730)
chr8 (293-428)||(1058139-1058274)
chr8 (231-310)||(11861792-11861871)
chr8 (224-311)||(37945584-37945670)
chr8 (329-427)||(14956396-14956494)
chr8 (223-279)||(35643983-35644039)
chr8 (228-320)||(27028809-27028901)
chr8 (250-310)||(29818936-29818996)
chr8 (293-376)||(12497296-12497379)
chr8 (229-279)||(43045726-43045776)
chr8 (236-353)||(10114435-10114551)
chr8 (221-310)||(16736072-16736161)
chr8 (225-333)||(29205773-29205880)
chr8 (226-369)||(25930552-25930695)
chr8 (373-428)||(40981000-40981055)
chr8 (235-333)||(21653046-21653144)
chr8 (224-426)||(29168053-29168250)
chr8 (227-309)||(36963353-36963434)
chr8 (233-298)||(35749575-35749640)
chr8 (232-310)||(41595967-41596047)
chr8 (161-310)||(42052044-42052193)
chr8 (223-363)||(6525753-6525892)
chr8 (224-320)||(10120734-10120830)
chr8 (229-269)||(11407349-11407389)
chr8 (162-222)||(12496993-12497053)
chr8 (226-310)||(38648339-38648423)
chr8 (233-308)||(30251459-30251534)
chr8 (326-401)||(32975957-32976032)
chr8 (359-426)||(41475181-41475248)
chr8 (224-298)||(13822048-13822121)
chr8 (375-424)||(9956949-9956998)
chr8 (254-303)||(30657798-30657847)
chr8 (240-333)||(38602298-38602391)
[»] chr6 (27 HSPs)
chr6 (248-428)||(6538387-6538562)
chr6 (224-411)||(18076083-18076277)
chr6 (230-315)||(6536598-6536683)
chr6 (207-427)||(12836150-12836371)
chr6 (276-428)||(24626165-24626317)
chr6 (286-400)||(6909930-6910045)
chr6 (224-295)||(9763563-9763634)
chr6 (224-315)||(34430457-34430548)
chr6 (225-369)||(8201162-8201306)
chr6 (301-393)||(30536383-30536475)
chr6 (233-400)||(6016380-6016547)
chr6 (223-290)||(14929718-14929785)
chr6 (224-427)||(34430587-34430789)
chr6 (224-333)||(2735034-2735143)
chr6 (238-310)||(8844660-8844732)
chr6 (240-288)||(30536520-30536568)
chr6 (255-369)||(6200488-6200602)
chr6 (235-315)||(20368187-20368267)
chr6 (326-401)||(35070728-35070804)
chr6 (246-353)||(837234-837341)
chr6 (359-428)||(264251-264320)
chr6 (235-320)||(415282-415367)
chr6 (224-265)||(848022-848063)
chr6 (324-401)||(30926435-30926512)
chr6 (235-300)||(31624088-31624153)
chr6 (359-428)||(35069432-35069501)
chr6 (226-315)||(35099020-35099108)
[»] scaffold0050 (1 HSPs)
scaffold0050 (223-294)||(58746-58817)
[»] scaffold0221 (1 HSPs)
scaffold0221 (224-309)||(22220-22305)
[»] scaffold0103 (1 HSPs)
scaffold0103 (224-298)||(51975-52051)
[»] scaffold0018 (1 HSPs)
scaffold0018 (337-428)||(157977-158068)


Alignment Details
Target: chr7 (Bit Score: 479; Significance: 0; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 14 - 520
Target Start/End: Original strand, 38138265 - 38138771
Alignment:
Q  14 atcagtgataattttgattagtaacagagtatcgttcaatcaagtccaaacaaggtttaaatatatgttttttggatttagactcagtacgtttttctgt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38138265 atcagtgataattttgattagtaacagagtatcgttcaatcaagtccaaacaaggtttaaatatatgttttttggatttagactcagtacgtttttctgt 38138364  T
Q  114 ttaaattcagtccctgcaaattcaaaaaacggttgcttttagggccagtttggaatgatttatttgagcttatctattggaataaattctgtgagactgt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  38138365 ttaaattcagtccctgcaaattcaaaaaacggttgcttttagggcctgtttggaatgacttatttgagcttatctattggaataaattctgtgagactga 38138464  T
Q  214 gtgagagaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38138465 gtgagagaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatca 38138564  T
Q  314 atgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagc 413  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38138565 atgtaacgttactttatcttatactataaaaatagcttatccaaccttatacataaactcttatcatgacaagtgattgtgctataagacgcaaataagc 38138664  T
Q  414 tgtttatccaaacagagtccctgacacgtcagcttatgtggcataagtttattgggtcacgaatgacatatggactaaaagcaattgaatttgtaaggac 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38138665 tgtttatccaaacagagtccctgacacgtcagcttatgtggcataagtttattgggtcacgaatgacatatggactaaaagcaattgaatttgtaaggac 38138764  T
Q  514 cgaatct 520  Q
    |||||||    
T  38138765 cgaatct 38138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 730 - 926
Target Start/End: Original strand, 38139006 - 38139202
Alignment:
Q  730 gagatgacatggttgtatacatgtacaatggaacttatatgaatcaacctacttaagatttgaaatggtgagtgcgaaggaggaagagtgagtacctgac 829  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38139006 gagatgacatggttgtatacatgtacaatggaacttatatgaatcaacctacttaagagttgaaatggtgagtgcgaaggaggaagagtgagtacctgac 38139105  T
Q  830 gaatgaggtgagactgagggatcgaaatgaggcatttggcgctccaaaggggatcattgaggtcggcgccatggcgttcaagctcagtcgctaaacc 926  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38139106 gaatgaggtgagactgagggatcgaaatgaggcatttggcgctccaaaggggatcattgaggtcggcgccatggcgttcaagctcagtcgctaaacc 38139202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 574 - 726
Target Start/End: Original strand, 38138826 - 38138978
Alignment:
Q  574 cgttataattacatggactaaaatcatatttaaacatttaagcaattaacaatttccataacagttcataaataaatgatacatataaaaaaggaataaa 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38138826 cgttataattacatggactaaaatcatatttaaacatttaagcaattaacaatttccataacagttcataaataaatgatacatataaaaaaggaataaa 38138925  T
Q  674 attaggttaattaaaaccctaagatcactatttgtatacaactacaggggaaa 726  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38138926 attaggttaattaaaaccctaagatcactatttgtatacaactacaggggaaa 38138978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 420437 - 420287
Alignment:
Q  221 aatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    ||||||||||| |||||  |||| |||||||||||||||||||||||||  |||||||||| |   |||||||||||||||||||||||| ||||  |||    
T  420437 aatttatgacagttttctaaagcctttttcaacttattttcataagttctccaatatagcttacggaaacaacttatagcatatacaaaaacaattgaac 420338  T
Q  321 attactttatcttatactataaaaacagcttatgcaaccttatacataaac 371  Q
    |||| |||||||| | ||||||| | ||||||||||| |||||||||||||    
T  420337 attattttatcttttgctataaacatagcttatgcaagcttatacataaac 420287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 19302559 - 19302713
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||||||||||||| |||||||||||||||||||||||||||     ||||||| |||||||||||||||| ||||||||||| |||| |||| ||    
T  19302559 ttatgacaattttcataaacttttttcaacttattttcataagttc----ttatagcttataaaaacaacttataacatatacaaaaacaatttaacgtt 19302654  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatga 382  Q
    ||| |||||| | || |||||| ||||||||||| | |||| |||||| |||| |||||    
T  19302655 actatatcttctgctgtaaaaatagcttatgcaaacatatatataaacgcttaacatga 19302713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 286 - 428
Target Start/End: Complemental strand, 9210639 - 9210498
Alignment:
Q  286 aaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaa 385  Q
    |||||||||||||||||||| ||||  ||| |||||| | ||||| || | ||||||||  ||||||||||| ||||||||||| |  ||||||||| ||    
T  9210639 aaaacaacttatagcatataaaaaag-aatttaacatcattttatttttttctataaaagtagcttatgcaagcttatacataagcgattatcatgataa 9210541  T
Q  386 gtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
     || ||| ||||||||  |||||||||||||||||||||||||    
T  9210540 atgtttgcgctataagctgcaaataagctgtttatccaaacag 9210498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 19022581 - 19022659
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcat 302  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  19022581 ttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcat 19022659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 39629953 - 39630039
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||| | ||||||||   |||||||||||||||    
T  39629953 ttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaaacaaagcatagcatatacaaaa 39630039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 219 - 315
Target Start/End: Complemental strand, 34744107 - 34744011
Alignment:
Q  219 agaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||| ||||||||||||||| |||||||||||  |||||||| ||||||||  |||||||||| || ||||||||||||| ||||||||||| ||||    
T  34744107 agaacttatgacaattttcacaagcttttttcgccttatttttataagttctccaatatagcttatgaaaacaacttataccatatacaaaaacaat 34744011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 224 - 363
Target Start/End: Complemental strand, 45338522 - 45338384
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||| || || |||||||||||||||||||| |||||  |||||||||| | |||||||||||| ||||||||||||| |||| |||  ||    
T  45338522 ttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagctta-aaaaacaacttacagcatatacaaaaacaatttaaggtt 45338424  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttat 363  Q
    | ||||| || | |||| |||| | ||||||||| |||||    
T  45338423 attttattttttgctatgaaaataacttatgcaagcttat 45338384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 30570927 - 30571122
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||  |||| ||| | ||||||| | ||||||||||||||||||  ||| |||| ||    
T  30570927 ttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatatacaaaaataatttaacttt 30571026  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||| |||   ||||| ||  |||||||| || ||||||||||  | |||||||||         | |||||||||  ||||||||||||||||||||    
T  30571027 attttacctttcgctatataagtagcttatgtaagcttatacatatgcacttatcatg--------ctatgctataagctgcaaataagctgtttatcca 30571118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 11619154 - 11619239
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaa 309  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||  ||||| |||||||||| | ||||||||| ||||    
T  11619154 ttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaattgatagcatattcaaa 11619239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 18865050 - 18865249
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||    | ||| || || |||| ||||||||||||||||| || |||  |||  ||||    
T  18865050 atgacattttttataagtttttttcaacttattttcataagttctctgaaataacttatgaaaa-aacttatagcatatacataa-caacttaattttac 18865147  T
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
     ||||||| | ||||   || | |||||| || |||||| |||||| |||||||||| ||| | ||||||||||||  ||||||||| ||||||||||||    
T  18865148 attatcttttgctatcttaataacttatgtaaacttataaataaacacttatcatgataagcgtttgtgctataagctgcaaataagttgtttatccaaa 18865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 3928003 - 3928051
Alignment:
Q  221 aatttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3928003 aatttatgacaattttcataagcttttttcaacttattttcataagttc 3928051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 19214404 - 19214476
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    |||||||||||||||| ||| |||||||||||||||||||||||  |||||||||| ||| ||||||||||||    
T  19214404 atgacaattttcataaacttgtttcaacttattttcataagttctacaatatagcttatacaaacaacttata 19214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 245 - 369
Target Start/End: Complemental strand, 31744362 - 31744238
Alignment:
Q  245 tttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaa 344  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||  |||||| ||||||| ||||| |||| ||||  || ||||||||  ||||| |||    
T  31744362 tttttcaacttattttcataagttcttcaatatagtttataaaattaacttaaagcatatccaaaaacaatttaacgctattttatctttaactatgaaa 31744263  T
Q  345 acagcttatgcaaccttatacataa 369  Q
    | || ||||||||  ||||||||||    
T  31744262 ataggttatgcaagtttatacataa 31744238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 46078160 - 46078017
Alignment:
Q  287 aaacaacttatagcatata--caaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgaca 384  Q
    |||||||||||||||||||  ||||| |||| |||| ||  |||||||| | ||||||||| | |||||| || ||||||||||| | |||||||||| |    
T  46078160 aaacaacttatagcatatatacaaaaacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcgcttatcatgata 46078061  T
Q  385 agtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
     ||| ||||||| ||||  ||| ||||||||||| |||||||||    
T  46078060 tgtgtttgtgctttaagttgcatataagctgtttgtccaaacag 46078017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 46280284 - 46280359
Alignment:
Q  240 aagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||||||| | |||||||||||||||  |||||||||| ||||||||| |||||||||||||||||| ||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaat 46280359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 430
Target Start/End: Original strand, 21568728 - 21568830
Alignment:
Q  328 tatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    |||||| | ||||||||| ||||||||||| |||||||||||   |||||||||| |||  ||| |||||||||  ||||| ||||||||||||||||||    
T  21568728 tatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaaaca 21568827  T
Q  428 gag 430  Q
    |||    
T  21568828 gag 21568830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 429
Target Start/End: Complemental strand, 48470118 - 48469919
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||| || ||||||||||||||||| | ||||| ||||||||||  |||| |||||| || |||||||||||||  |||||||||| |||| |||| |     
T  48470118 ttatggcatttttcataagcttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaactta 48470019  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | || || ||| |||||||| |  |||||||| || | |      ||| ||||| ||||||||||||  |||||||||||||| | |||    
T  48470018 attttatcttttgctgtagaaatagcttatgaaggcttatacaaaagcgc------tgataagtgtttgtgctataagctgcaaataagctgttcaccca 48469925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 348 - 429
Target Start/End: Original strand, 3308372 - 3308453
Alignment:
Q  348 gcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacaga 429  Q
    ||||||| |||||||||||||| | |||||||||| |||| |||||||||||||   ||||||||||||||||| |||||||    
T  3308372 gcttatgtaaccttatacataagcacttatcatgaaaagtacttgtgctataagctccaaataagctgtttatctaaacaga 3308453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 43694595 - 43694693
Alignment:
Q  253 cttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagctta 352  Q
    ||||||||||||||||| || |||||||| ||||||||| |||||||||||||||||| |||| ||     | |||||||| | ||||||||||||||||    
T  43694595 cttattttcataagttcttcgatatagcttataaaaacagcttatagcatatacaaaaacaattta-----aatttatctt-ttctataaaaacagctta 43694688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 283 - 428
Target Start/End: Complemental strand, 45264110 - 45263963
Alignment:
Q  283 ataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaaca--gcttatgcaaccttatacataaactcttatcat 380  Q
    ||||||| | |||||||||||||||||| |||| |||| ||| || ||||| | ||||||||| |  ||||||| || ||||| | ||| | ||| ||||    
T  45264110 ataaaaatagcttatagcatatacaaaaacaatttaactttatttcatctttttctataaaaaaatagcttatgtaagcttatgcgtaagcgcttttcat 45264011  T
Q  381 gacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    || ||| |||||||  ||||| |||||||||| |||||||||||||||    
T  45264010 gataagcgcttgtgtgataagccgcaaataagttgtttatccaaacag 45263963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 277 - 401
Target Start/End: Original strand, 45806526 - 45806650
Alignment:
Q  277 tagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactctta 376  Q
    ||||| |||||||||||||||||||  || |||| |||| |||| ||| ||| |||| | ||||||| | ||||||||||| |||||||||||   ||||    
T  45806526 tagcttataaaaacaacttatagcaattagaaaaacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgctta 45806625  T
Q  377 tcatgacaagtgcttgtgctataag 401  Q
    | |||| |||||||| |||||||||    
T  45806626 ttatgataagtgcttttgctataag 45806650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 425
Target Start/End: Original strand, 4970819 - 4970985
Alignment:
Q  254 ttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttat 353  Q
    ||||||||||||||||   |||||| || ||||||| |||||||||||||||||||| ||||      ||| |||||||| | ||||| ||| |||||||    
T  4970819 ttattttcataagttctctaatatatcttataaaaagaacttatagcatatacaaaaacaat-----tttattttatcttttgctatagaaatagcttat 4970913  T
Q  354 gcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    | || ||||||||||| | |||||||||  | |  ||| | |||||||  |||||||||| |||||||||||    
T  4970914 gtaagcttatacataaccgcttatcatggtagggactttttctataagctgcaaataagccgtttatccaaa 4970985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 21196342 - 21196271
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaactta 296  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||  ||||| |||| ||||||||||||||    
T  21196342 tatgacaattttcatatgctttttttaacttattttcttaagttctgcaataaagcttataaaaacaactta 21196271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 20258569 - 20258465
Alignment:
Q  241 agcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactat 340  Q
    |||||||||||| |||||||||||  |||  ||||| |||| |  ||||||||||||||||  ||||||| |||| |||||||| |||||||| | ||||    
T  20258569 agcttttttcaatttattttcatatattctccaatacagcttagtaaaacaacttatagcaattacaaaaacaatttaacattattttatcttttgctat 20258470  T
Q  341 aaaaa 345  Q
    |||||    
T  20258469 aaaaa 20258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 241 - 345
Target Start/End: Complemental strand, 20269633 - 20269529
Alignment:
Q  241 agcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactat 340  Q
    ||||||||||||||||||||||||| |||  ||||| |||| |  ||||||||||||| ||| ||||||| |||| |||| ||  |||||||| | ||||    
T  20269633 agcttttttcaacttattttcataaattctccaatacagcttagtaaaacaacttataacatttacaaaaacaatttaactttgttttatcttttgctat 20269534  T
Q  341 aaaaa 345  Q
    |||||    
T  20269533 aaaaa 20269529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 21568491 - 21568559
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaa 292  Q
    |||| |||||||||||||||| ||||||||||| || |||||||||  |||||||||| ||||||||||    
T  21568491 ttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaacaa 21568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 33601406 - 33601516
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||   || |||||| || |||||||||||||||| ||||||||  ||| |||| ||    
T  33601406 ttatgacacttttcataagcttttttcagcttaaattcataagttctctaagatagcttat-aaaacaacttatagcaaatacaaaaataatttaacttt 33601504  T
Q  324 actttatcttat 335  Q
    | ||||| ||||    
T  33601505 attttattttat 33601516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 38499909 - 38500118
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaactta------tagcatatacaaaatcaatgt 317  Q
    |||||||| |||||||||||||||| || |||||||||||||||||  ||| || ||| || || ||| ||||      ||||||||||||||  ||| |    
T  38499909 ttatgacatttttcataagctttttccagcttattttcataagttctccaagattgcttatgaagacagcttaacaatttagcatatacaaaag-aatat 38500007  T
Q  318 aacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtt 417  Q
    ||| ||| | |||| | | | | ||||| | ||| || || | ||||||||| | |||||||||| ||| |||||||||||||   ||||||||||||||    
T  38500008 aactttattatatcatttccaacaaaaataacttctgtaatcatatacataagcgcttatcatgataagcgcttgtgctataaactgcaaataagctgtt 38500107  T
Q  418 tatccaaacag 428  Q
    |||| ||||||    
T  38500108 tatctaaacag 38500118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 23989582 - 23989684
Alignment:
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||||| ||||||||||| || |||||||| |||||||||||   |||||||||| ||| || ||| |||||||  ||||||||| ||||  ||||||    
T  23989582 tttatcttttactataaaaatagtttatgcaaacttatacataagaacttatcatgataagcgcgtgtactataagctgcaaataagttgttactccaaa 23989681  T
Q  426 cag 428  Q
    |||    
T  23989682 cag 23989684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 27863728 - 27863806
Alignment:
Q  231 aattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaa 309  Q
    |||||||| || ||||||||| ||||| |||||||||||   ||||||| | || ||||||||||||||||||||||||    
T  27863728 aattttcaaaaacttttttcagcttatgttcataagttctctaatatagtttattaaaacaacttatagcatatacaaa 27863806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 28341048 - 28341133
Alignment:
Q  219 agaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    |||| ||||||||||||||| ||||||||| || |||| ||||||||||||   ||||||| | ||| |||||||||||||||||||    
T  28341048 agaacttatgacaattttcaaaagctttttccagctta-tttcataagttctctaatatagtttatacaaacaacttatagcatata 28341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 49019942 - 49019856
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||| |||||||| || ||||||||   ||||||||||||||||  ||||||| || ||||||| | ||||||||||||||||||    
T  49019942 ttatgaaaattttcacaatcttttttcggtttattttcataagttctacaatataacttataaaaatagcttatagcatatacaaaa 49019856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 33128696 - 33128627
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||| ||||| | |||||||||| ||||| ||||||| ||||  |||||||||||||||||||||||||    
T  33128696 cttatgcataagcacttatcatgataagtgtttgtgctgtaagctgcaaataagctgtttatccaaacag 33128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 33678724 - 33678663
Alignment:
Q  366 ataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    |||| |||||||||||| |||  |||||||||||||| ||||||||||||||| ||||||||    
T  33678724 ataagctcttatcatgataagcacttgtgctataagatgcaaataagctgtttgtccaaaca 33678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 45790422 - 45790502
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    ||||||||||||| | ||||||||| || ||||||||||||||||   |||||||| | |||||||||||||||||| ||||    
T  45790422 ttatgacaatttttaaaagcttttt-cagcttattttcataagttatccaatatagtttataaaaacaacttatagcttata 45790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 20526596 - 20526528
Alignment:
Q  161 gtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatga 229  Q
    ||||||| ||| ||||||||| ||||||||||| | ||||| ||||||||||| |||||||| ||||||    
T  20526596 gtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatga 20526528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 27566690 - 27566734
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagtt 268  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||    
T  27566690 ttatgacaactttcacaagcttttttcaacttattttcataagtt 27566734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 361 - 428
Target Start/End: Complemental strand, 19131307 - 19131240
Alignment:
Q  361 tatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||| |||||||| | || |||||||||||||||   |||| |||||||||||||||||||    
T  19131307 tatacataaacgcttatcataataattgcttgtgctataagcttcaaacaagctgtttatccaaacag 19131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 339 - 401
Target Start/End: Complemental strand, 20428426 - 20428364
Alignment:
Q  339 ataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    |||||| || |||||| |||||||||||||| | |||||||||| ||||| ||||||||||||    
T  20428426 ataaaaccaccttatgtaaccttatacataagcgcttatcatgagaagtgtttgtgctataag 20428364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 529510 - 529382
Alignment:
Q  163 ttggaatgatttatttgagcttatctattggaataaattct-gtgagactgtgtgagagaatttatgacaattttcataagcttttttcaacttattttc 261  Q
    ||||| ||| ||||||||||||||||| ||| |||||  || ||||| || | || ||||| ||||||||| || |||||||| |||||||| |||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgaggctatttgggagaacttatgacaagtt-cataagctgttttcaacatattttc 529412  T
Q  262 ataagttcgtcaatatagctaataaaaaca 291  Q
    ||||| ||  ||| |||||| || ||||||    
T  529411 ataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 18765433 - 18765364
Alignment:
Q  162 tttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgaca 231  Q
    |||||| || |||||||||||||||||||||  |||| || ||||||||||| || ||||| ||||||||    
T  18765433 tttggattgctttatttgagcttatctattgacataagttttgtgagactgtttgggagaacttatgaca 18765364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 310
Target Start/End: Complemental strand, 28614502 - 28614421
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||| ||||||||||||  ||| ||||||||||||  ||||| ||||  |||||||| || ||| |||||||||||    
T  28614502 acaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaaacagctaatatcatatacaaaa 28614421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 33552942 - 33553007
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaa 424  Q
    ||||||||||| | |||||||||  |||||||||||| |||||  ||||||||| |||||||||||    
T  33552942 cttatacataagcgcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 45593600 - 45593515
Alignment:
Q  226 atgacaattttcataagcttttttcaactt-attttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||| |||||||||||||||||| | || |||||| |||||||  ||| |||||| | ||||| | ||||||||||||||||||    
T  45593600 atgacatttttcataagcttttttccagtttattttcgtaagttctccaagatagcttagaaaaatagcttatagcatatacaaaa 45593515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 46139891 - 46139822
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||| |||| | |||||||||| ||||||||||| ||||||  ||||||||| |||||| ||||||||    
T  46139891 cttatagataatcacttatcatgataagtgcttgtgttataagctgcaaataagttgtttaaccaaacag 46139822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 17944339 - 17944435
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||||||| |||||||| |||||||||| |||| |||||||| ||   ||| ||| || || ||||||||||| | ||||||||||| |||| ||||    
T  17944339 ttatgacacttttcatatgcttttttcagcttaatttcataaattatccaagataacttatgaaaacaacttacaacatatacaaaaacaatttaac 17944435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 38640072 - 38639992
Alignment:
Q  240 aagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    ||||||||||| | |||||||||||| ||   |||||||||| ||||||| ||||||||| ||||| |||| |||| ||||    
T  38640072 aagcttttttcgatttattttcataacttatccaatatagcttataaaaataacttatagtatataaaaaaacaatttaac 38639992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 12110404 - 12110325
Alignment:
Q  254 ttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    |||||||||||||||| |||| |||||| || |||||| |||||||| ||||| ||| |||| | || ||| ||||||||    
T  12110404 ttattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 15309562 - 15309668
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||| |||||||||||| ||||||| || ||||||||||||| |||  | | ||| || || ||||||||||| | ||||||||||| |||| |||| ||    
T  15309562 ttatcacaattttcatatgctttttgca-cttattttcataaattctccgaaataacttatgaaaacaacttaaaacatatacaaaaacaatttaacttt 15309660  T
Q  324 actttatc 331  Q
    | ||||||    
T  15309661 attttatc 15309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 33602023 - 33602113
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||| ||||||||||| ||||||| ||||  |||||||||||   || |||||| || ||||| |||||||||| |||||||| ||||    
T  33602023 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 33602113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 33678832 - 33678745
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    ||||||||||||||||| |||||   ||| |||||| || |||||| |||||||| | ||||||| | || |||| ||||||||||||    
T  33678832 ttttcaacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaactttactttatctt 33678745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 40377851 - 40377934
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||| ||||| |||||||||||| |  ||||||||||||||||  |||||||| | || ||||||||||  | |||||||||||    
T  40377851 tgactattttaataagcttttttgagtttattttcataagttctccaatataggttatgaaaacaacttgcaacatatacaaaa 40377934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 40439114 - 40439047
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    ||||||| |||| ||||||||| |||||| || |||  ||||||||| ||||||||||||| ||||||    
T  40439114 ataagctgtttttaacttatttccataagctcttcaggatagctaatgaaaacaacttataacatata 40439047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 11700293 - 11700383
Alignment:
Q  255 tattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaa 345  Q
    |||||||||||||||   ||| ||||| ||||||  | ||||| ||||||| |||| ||||||||| ||| |||||||| | |||||||||    
T  11700293 tattttcataagttctcaaatttagcttataaaagaagcttattgcatatataaaaacaatgtaactttattttatctttttctataaaaa 11700383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 17942226 - 17942152
Alignment:
Q  156 ggccagtttggaatgatttatttgagcttatctattggaataaa-ttctgtgagactgtgtgagagaatttatga 229  Q
    |||| ||||||||||| || |||||||||||||| || ||||||   |||||||||||| |||||||| ||||||    
T  17942226 ggcctgtttggaatgacttgtttgagcttatctactgcaataaacacctgtgagactgtctgagagaacttatga 17942152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 40252107 - 40252189
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||| ||||||| | ||| |||||||||||||||||  ||| ||| || || |||| | |||||| |||||||||||    
T  40252107 gacaattttcgtaagcttctatcagcttattttcataagttctccaagataacttatgaaaagagcttataacatatacaaaa 40252189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 40530427 - 40530481
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagc 300  Q
    |||||||||||||||||||||||| | |  |||||| || |||||||||||||||    
T  40530427 ttttcaacttattttcataagttctttaggatagcttattaaaacaacttatagc 40530481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 20428548 - 20428503
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||| || |||||||||||||||| ||||||||| |||||||    
T  20428548 ttatgacagttctcataagcttttttcagcttattttcgtaagttc 20428503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 39967983 - 39967918
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagc 300  Q
    |||||||||| |||||||||||||||||| |||||    | |||||| || |||||||||||||||    
T  39967983 ttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagc 39967918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 44822011 - 44821942
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    ||||||||||||||||||||||||  ||  |||||| || |||||| |||||| | ||||||||| ||||    
T  44822011 ttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaat 44821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 47795891 - 47795838
Alignment:
Q  374 ttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||||||| ||| |||| |||||||||  |||||||||||||||||| |||||    
T  47795891 ttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 48140227 - 48140145
Alignment:
Q  285 aaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    ||||||||||||||||||||  |||| |||| ||   ||| |||||||| |  |||||||| ||||||||||| |||||||||||    
T  48140227 aaaaacaacttatagcatattgaaaaacaatctag--ttattttatcttttgttataaaaatagcttatgcaagcttatacataa 48140145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 3e-57; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 50681087 - 50681288
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    ||||||||||||||||||||||||||| |||||||||||| |||  |||||||||| ||| |||||||||||||||||||||||| |||| ||||||||     
T  50681087 atgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttatataaacaacttatagcatatacaaaaacaatttaacattat 50681186  T
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||||||| ||||||||| ||||| || || ||||||||||||| |||||||||| |||| |||||||||||||    ||||||| ||||||||||||    
T  50681187 tttatcttatcctataaaaatagcttttgtaagcttatacataaacgcttatcatgataagttcttgtgctataagctataaataagttgtttatccaaa 50681286  T
Q  426 ca 427  Q
    ||    
T  50681287 ca 50681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 229 - 369
Target Start/End: Original strand, 54069418 - 54069558
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttt 328  Q
    |||||||||||||||| |||| |||||||||||||| |||| |||||||| || |||||||||| ||||||||||||||||| |||| |||||||| |||    
T  54069418 acaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaacaatttaacattatttt 54069517  T
Q  329 atcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    ||||| |  |||||||| ||| ||||||| |||||||||||    
T  54069518 atcttttgatataaaaatagcatatgcaagcttatacataa 54069558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 7839357 - 7839448
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||| ||||||||||||||||| ||||    
T  7839357 ttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaaacaat 7839448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 50662736 - 50662921
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    ||||||||||||||||||||||||||||||||||||| || |||  |||||||||| ||| |||||||||||||||||||      |||| ||||||||     
T  50662736 atgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttatagcatata------caatttaacattat 50662829  T
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||||||| ||||||||| ||          ||||||||||||| || ||||||| |||  |||||| ||||||  ||||||||| ||||||||||||    
T  50662830 tttatcttatgctataaaaatag----------cttatacataaacgctcatcatgataagctcttgtgatataagctgcaaataagttgtttatccaaa 50662919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 156 - 333
Target Start/End: Original strand, 39691064 - 39691248
Alignment:
Q  156 ggccagtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatg---aca----attttcataagcttttt 248  Q
    |||| ||||| | ||| ||||||||||||||||| | | |||| || ||||||||||| ||||||||||||||   |||    ||||   |||| |||||    
T  39691064 ggcctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagcttatttatctaagtttttt 39691163  T
Q  249 tcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||  | | |||||||| ||||||||    
T  39691164 tcaacttattttcgtaagttcttcaatatagcttataaaaacaacttatagcatatacaaaacaattttaacattattttatctt 39691248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 224 - 401
Target Start/End: Complemental strand, 41336834 - 41336658
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||| |||   ||||| | |||||||| ||||| ||||||||||| |||| |||| ||    
T  41336834 ttatgacagttttcataagcttttttcaacttattttcgtaaattcttcaccctagcttagaaaaacaatttataacatatacaaaaacaatttaacttt 41336735  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    | |||||||| | ||||||||| ||||||||||| | |||||||||   |||||||| | |||  |||||||||||||    
T  41336734 attttatctt-tgctataaaaatagcttatgcaagcctatacataagtgcttatcataataagaacttgtgctataag 41336658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 46592205 - 46592410
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaat-aaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||  ||||||| || || |||||||||||||| |||||| ||||||||| || | |    
T  46592205 ttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttataacatatataaaatcaatttaccgt 46592304  T
Q  323 tactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcc 422  Q
     | || || || | ||||||||| |||| |||| | ||||| ||||  | |||||||| | ||||||||||||| ||||  | |||||||||| |||| |    
T  46592305 catttaattttttgctataaaaatagctcatgctagcttatgcataggcacttatcattataagtgcttgtgctttaagctgtaaataagctggttatac 46592404  T
Q  423 aaacag 428  Q
    ||||||    
T  46592405 aaacag 46592410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 225 - 428
Target Start/End: Complemental strand, 44797960 - 44797762
Alignment:
Q  225 tatgacaattttcataagcttttttc-aacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||| |||||||||| ||||||  ||||||| || ||||| ||  ||||| |||| |||||||||||||||||| || ||||||||||| |||| ||    
T  44797960 tatgacatttttcataagtttttttttaacttatctttataagctctccaatacagcttataaaaacaacttatagcgtacacaaaatcaatttaacgtt 44797861  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
      |||||||| | ||||||||| |||||||||||      | |||| |||||| ||||| ||  ||||||||||||||  ||||||||| ||||||||||    
T  44797860 gttttatcttttgctataaaaatagcttatgcaa------atataatctcttaccatgataatcgcttgtgctataagttgcaaataagttgtttatcca 44797767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 224 - 353
Target Start/End: Original strand, 21731652 - 21731778
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||| ||||||||||||| |||||||||||||| |||||||| |||  |||||||||| ||||||||||||||||||| |||||||| |||   ||  ||    
T  21731652 ttatcacaattttcataaacttttttcaacttactttcataaattctccaatatagcttataaaaacaacttatagcacatacaaaaacaa---aatgtt 21731748  T
Q  324 actttatcttatactataaaaacagcttat 353  Q
    |||||||||| | ||||||||| |||||||    
T  21731749 actttatcttttgctataaaaatagcttat 21731778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 54426117 - 54425974
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| | |||||||||||||||| |||||| |||  |||| ||   ||    
T  54426117 ttatgacaattttcataagcttttttcaagttattttcataagttctccaatatagattataaaaacaacttataacatatataaa--caatttagtgtt 54426020  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    | |||||||  | ||| ||||  ||||||||||| |||||||||||    
T  54426019 attttatctgctgctacaaaagtagcttatgcaagcttatacataa 54425974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 256 - 428
Target Start/End: Complemental strand, 17204180 - 17204008
Alignment:
Q  256 attttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgc 355  Q
    ||||||||||||||  ||| ||| ||||| |||  ||||| |||||||||||||| |||| |||| ||| |||| | | | ||||||||||||||||||     
T  17204180 attttcataagttctccaagataactaatgaaactaacttgtagcatatacaaaaacaatataactttattttaacatttgctataaaaacagcttatgt 17204081  T
Q  356 aaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    || || | |||||| |  ||||| ||| |||||||||| |||||||  ||||||||| |||||||||||||||    
T  17204080 aagctaacacataagcggttatcgtgataagtgcttgttctataagctgcaaataagttgtttatccaaacag 17204008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 224 - 399
Target Start/End: Original strand, 55414416 - 55414591
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||| ||| || || ||||||| ||||||||||| |||||  ||  |||| ||    
T  55414416 ttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaaaaattaacttt 55414515  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctata 399  Q
    | |||||||| | | ||| ||| ||||||||||  |||||| ||||   |||||||||  ||| ||||| ||||||    
T  55414516 attttatcttttccaatagaaatagcttatgcacgcttataaataagaacttatcatggtaagcgcttgagctata 55414591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 354
Target Start/End: Complemental strand, 2244125 - 2243993
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaata--aaaacaacttatagcat-atacaaaatcaatgtaac 320  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||  |||||||||| |||  ||||||||||||||||| |||||||| ||| ||||     
T  2244125 ttatgacaatattcataaacttttttcaccttattttcataagttctccaatatagcttatattaaaacaacttatagcataatacaaaaacaacgtaat 2244026  T
Q  321 attactttatcttatactataaaaacagcttatg 354  Q
    |||| |||||||| | ||||||||  ||||||||    
T  2244025 attattttatctt-ttctataaaactagcttatg 2243993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 46588069 - 46588156
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaat-aaaaacaacttatagcatatacaaaa 310  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||  ||||||| || || ||||||||||||||||||||| ||||    
T  46588069 ttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttatagcatatataaaa 46588156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 223 - 369
Target Start/End: Original strand, 33586950 - 33587095
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||  | |||||||| ||||||||||| |||| ||||||||||| |  |  ||| |    
T  33586950 tttaagacaatattcataagcttttcttaacttattttcataagttctccgatatagcttataaaaacaacctataacatatacaaaaac-gttcaacgt 33587048  T
Q  323 tactttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    |  ||||||||   ||||||||| ||||||||||| |||||||||||    
T  33587049 tgttttatctttcgctataaaaatagcttatgcaagcttatacataa 33587095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 17822861 - 17822942
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||  ||| |||||| || ||||||||||||||||||||    
T  17822861 ttatgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatata 17822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 286 - 428
Target Start/End: Original strand, 25904268 - 25904414
Alignment:
Q  286 aaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataa----actcttatcatg 381  Q
    |||||| ||||||||| ||||||||||||| |||| ||| |||||||| | || |||||| |||||||| || |||||| ||||    |  |||||||||    
T  25904268 aaaacagcttatagcaaatacaaaatcaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatg 25904367  T
Q  382 acaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    | |||||||||||||||||   |||||| || |||||||||||||||    
T  25904368 ataagtgcttgtgctataatctgcaaatgagttgtttatccaaacag 25904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 224 - 421
Target Start/End: Original strand, 15173299 - 15173493
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||| ||||||||| | |||||||| ||| |   | ||||||| |||||||| |||||||||| ||| || | |||| || | ||    
T  15173299 ttatgacaattttcataagtttttttcaaatgattttcattagtcc---agtatagcttataaaaaccacttatagcacatagaagaacaatttatcgtt 15173395  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatc 421  Q
    | ||||||||   |||| |||  ||||||||||| ||||||||||  | |||||||||| ||| | |||||||| |||  | ||||||||| ||||||    
T  15173396 attttatctttagctattaaagtagcttatgcaagcttatacatatgcgcttatcatgataagcgtttgtgctacaagctgaaaataagctatttatc 15173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 230 - 368
Target Start/End: Original strand, 15177204 - 15177342
Alignment:
Q  230 caattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttta 329  Q
    ||||||||||||| ||||||||| | |||||||| |||||   | ||||||| |||||||| |||||||||| ||| || | |||| |||| ||| ||||    
T  15177204 caattttcataagtttttttcaaatgattttcattagttctctagtatagcttataaaaaccacttatagcacatagaagaacaatttaacgttatttta 15177303  T
Q  330 tcttatactataaaaacagcttatgcaaccttatacata 368  Q
    ||||   |||| |||| ||||||||||| ||||||||||    
T  15177304 tctttagctattaaaatagcttatgcaagcttatacata 15177342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 22030277 - 22030120
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||||||| |||  ||||||||||||||||   ||| || ||  ||| |||||||||||||||||||||||  ||| |||| ||    
T  22030277 ttatgacaattttcaaaagcttttctcaggttattttcataagttctctaatttaacttgtaagaacaacttatagcatatacaaaaataatataacttt 22030178  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatga 382  Q
    | |||||| | | ||||| ||| ||||||||  | ||||||||||| | ||||||||||    
T  22030177 attttatcct-ttctatagaaatagcttatgtgagcttatacataagcgcttatcatga 22030120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 357
Target Start/End: Complemental strand, 29388689 - 29388555
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    |||||||||||||| ||| ||| |||||||||||||||||||| |||  || ||||||| |||||||| ||||||  ||| ||||||| |||| |||| |    
T  29388689 tttatgacaatttttatatgctcttttcaacttattttcataaattctccagtatagcttataaaaactacttatcacatctacaaaaacaatttaacgt 29388590  T
Q  323 tactttatcttatactataaaaacagcttatgcaa 357  Q
    ||  ||||||| |  |||||||| |||||| ||||    
T  29388589 tatcttatcttttgttataaaaagagcttaggcaa 29388555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 31076429 - 31076527
Alignment:
Q  271 tcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    ||||||||||| |||||||||| ||||||||||||||||| || | |||  ||| |||||||| | || |||||| ||||||||||| |||||||||||    
T  31076429 tcaatatagcttataaaaacaatttatagcatatacaaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttatacataa 31076527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 44862975 - 44863048
Alignment:
Q  219 agaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaa 292  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||||||||  |||| ||||| ||||||||||    
T  44862975 agaaattatgacgattttcataagcttttttcaacttatttgcataagttctacaatttagcttataaaaacaa 44863048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 39603166 - 39603238
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaactta 296  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||  ||||||| || ||||||||||||||    
T  39603166 ttatgacaatttttataagctttttttaagttattttcataagttctccaatataccttataaaaacaactta 39603238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 273 - 369
Target Start/End: Original strand, 42404043 - 42404139
Alignment:
Q  273 aatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    ||||| ||| ||||||||| |||| ||||| ||||||| |||| |||||||| |||||||| | ||||||||| ||| ||||||| |||||||||||    
T  42404043 aatatggcttataaaaacagcttacagcatgtacaaaaacaatttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataa 42404139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 44863083 - 44863151
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||| ||||| | |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  44863083 cttatgcataagcacttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 224 - 363
Target Start/End: Complemental strand, 9760516 - 9760375
Alignment:
Q  224 ttatgacaattttcataagcttttttcaac--ttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaaca 321  Q
    ||||| |||||||||| || ||||||| |   ||||||||||||||||  |||||||||| ||||||||||||||||||||||  ||||  ||| ||||     
T  9760516 ttatggcaattttcattagtttttttcgatatttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaact 9760417  T
Q  322 ttactttatcttatactataaaaacagcttatgcaaccttat 363  Q
    ||| |||||||| | | ||||||| | |||||| || |||||    
T  9760416 ttattttatctttttcaataaaaataacttatgaaagcttat 9760375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 315
Target Start/End: Original strand, 53294119 - 53294201
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||| ||||| |||||| ||| |||||||||||||   ||||||| | |||||||||||||||||||||||||||| ||||    
T  53294119 ttttcaaaagctattttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatatacaaaaacaat 53294201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 427
Target Start/End: Complemental strand, 43505947 - 43505829
Alignment:
Q  307 aaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgca 406  Q
    |||| |||| |||| ||| |||||||| | ||||||||| ||||||||||| |||||||||||   ||||||||||   ||  ||||||||||||  |||    
T  43505947 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgca 43505850  T
Q  407 aataagctgtttatccaaaca 427  Q
    |||||| ||||||||||||||    
T  43505849 aataagttgtttatccaaaca 43505829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 55302323 - 55302238
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaa 309  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||   ||| |||||| || | |||| ||||||| |||||||||    
T  55302323 ttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttatgataacagcttatagtatatacaaa 55302238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 41512725 - 41512646
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcata 303  Q
    |||| ||| ||||||||||||||| ||| ||||||||||||||||| || | | |||| || ||||||||||||||||||    
T  41512725 ttataacacttttcataagcttttatcatcttattttcataagttcttccagaaagcttatgaaaacaacttatagcata 41512646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 401
Target Start/End: Complemental strand, 18425882 - 18425710
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactt 327  Q
    |||| |||||||||||||||| ||||||||||| ||| ||||  ||| || |||  | ||||||  ||||| ||| ||||||| |||| |||| ||| ||    
T  18425882 gacatttttcataagctttttccaacttatttttatatgttctccaagatggcttttgaaaacattttataacatgtacaaaaacaatttaactttattt 18425783  T
Q  328 tatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    || | | | | || |||| |||| ||| || ||||||||||| | |||||||||  ||||||||||||||||||    
T  18425782 taccatttgccat-aaaatagctcatgtaatcttatacataatcacttatcatggtaagtgcttgtgctataag 18425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 40831030 - 40831098
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttat 297  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||  |||| ||||| |||||||||||||||    
T  40831030 gacaacttttataagcttttttcaactta-tttcataagttctccaatctagcttataaaaacaacttat 40831098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 293 - 429
Target Start/End: Complemental strand, 19494919 - 19494783
Alignment:
Q  293 cttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttg 392  Q
    |||| ||||||||||||| |||| || | ||| |||||| | | ||||| ||  |||||||| |||||||||||||    |||||||||| |||| ||||    
T  19494919 cttagagcatatacaaaaacaatttagctttattttatcatttgctatagaactagcttatgtaaccttatacataggtgcttatcatgaaaagtacttg 19494820  T
Q  393 tgctataagacgcaaataagctgtttatccaaacaga 429  Q
    |||||||||   | |||||| |||||||| |||||||    
T  19494819 tgctataagctccgaataagatgtttatctaaacaga 19494783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 42121581 - 42121479
Alignment:
Q  203 tgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcat 302  Q
    ||||||||||| |||||||| |||||||| | |||||||||| ||| || ||||||| || ||||||  ||| |||||| || ||||||||||||||| |    
T  42121581 tgtgagactgtttgagagaacttatgaca-tgttcataagctgttt-cagcttatttccacaagttctccaagatagctcatgaaaacaacttatagctt 42121484  T
Q  303 ataca 307  Q
    |||||    
T  42121483 ataca 42121479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 11347853 - 11347766
Alignment:
Q  224 ttatgacaattttcataagcttttttcaactt-attttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||||||||||| |||| |||||  |||||||||||||  | ||| | || ||||||| ||||||||| ||||||||||    
T  11347853 ttatgacaattttcataagctatttttaacttgtttttcataagttctccgataaatcttataaaaataacttatagtatatacaaaa 11347766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 20109073 - 20108950
Alignment:
Q  234 tttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    ||||| ||||||||||| ||| ||||||| ||||||   |||||| || ||||||||| |||||| ||||||||||| |||  |||| | | ||||||||    
T  20109073 tttcacaagcttttttcgactcattttcaaaagttctctaatatatcttataaaaacagcttataccatatacaaaaacaacttaacttcattttatctt 20108974  T
Q  334 atactataaaaacagcttatgcaa 357  Q
     | || |||||  |||||||||||    
T  20108973 ttcctctaaaactagcttatgcaa 20108950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 2996634 - 2996556
Alignment:
Q  237 cataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||||||||||||||||||||||| | ||  ||| |||||| || ||||||||||||| | |||| |||| ||||    
T  2996634 cataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaat 2996556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 17884131 - 17884033
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    |||||||| | |||||| || ||||||||||| ||  |||||||||| || ||||||||| ||| | ||||||||| |||| |||| ||| ||||||||    
T  17884131 ttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatctt 17884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 24169337 - 24169295
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataag 266  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  24169337 ttatgacatttttcataagattttttcaacttattttcataag 24169295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 13126572 - 13126617
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||| || |||||||||||||||| |||||||||||||||||    
T  13126572 ttatgacatttatcataagcttttttcagcttattttcataagttc 13126617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 27028 - 27084
Alignment:
Q  373 cttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacaga 429  Q
    |||||||||| ||| ||||||||||||||  ||||| ||| ||||||||||||||||    
T  27028 cttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacaga 27084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 16199991 - 16200063
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||| ||||| | ||||||||||||||| |  ||| |||||| || |||||| ||||||||||||||||||    
T  16199991 ataagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaa 16200063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 47119086 - 47119134
Alignment:
Q  379 atgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    |||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  47119086 atgataagtgcttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 353
Target Start/End: Complemental strand, 3155655 - 3155548
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaa 345  Q
    |||||| ||||||||||| ||||| |||| |||| | || |||||| ||| |||| | ||||||| |||| |||| ||| |||||||| | ||||| |||    
T  3155655 ttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgctatagaaa 3155556  T
Q  346 cagcttat 353  Q
     |||||||    
T  3155555 tagcttat 3155548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 425
Target Start/End: Original strand, 39603585 - 39603628
Alignment:
Q  382 acaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||||| |||||||||||  ||||||||||||||||||||||    
T  39603585 acaagtgcctgtgctataagctgcaaataagctgtttatccaaa 39603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 267
Target Start/End: Complemental strand, 56249590 - 56249555
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagt 267  Q
    |||||||||||||||||||||||||||||| |||||    
T  56249590 attttcataagcttttttcaacttattttcttaagt 56249555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 23277362 - 23277320
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  23277362 cttatacataagctcttatcattataagtgcttgtgctataag 23277320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 425
Target Start/End: Complemental strand, 44138633 - 44138442
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| | |||| ||||  |||||| |||||||||||||||||  ||| || | | || ||||||| ||| ||  ||||| ||| |||| |||| ||    
T  44138633 ttatgacattattcacaagcaattttcagcttattttcataagttctccaacatggtttatgaaaacaaattacaggctatacgaaagcaatttaacttt 44138534  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||||| ||||||          ||||||||||| |   |||||||| |||||||||| ||| |||  ||||||||||||||||||||    
T  44138533 attttatcttctgctatagaaacag----------cttatacataagcaagtatcatgataagtgcttgtactaaaagctgcaaataagctgtttatcca 44138444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 45935268 - 45935361
Alignment:
Q  275 tatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    ||||||| |||||||||||||   |||||||||||| |||  |||| ||| || ||||| | ||||||| | ||||||||||| |||||||||||    
T  45935268 tatagcttataaaaacaacttcg-gcatatacaaaaacaaattaacgttaattaatcttttgctataaacatagcttatgcaagcttatacataa 45935361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 26861 - 26925
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaa 289  Q
    ||||||||| ||||| ||||||||| ||  ||||||||||||||||  |||||||||| |||||||    
T  26861 ttatgacaaatttcacaagcttttt-cagattattttcataagttctccaatatagcttataaaaa 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 13216207 - 13216240
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttat 257  Q
    |||||||||||||||||||||||||| |||||||    
T  13216207 ttatgacaattttcataagctttttttaacttat 13216240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 25904219 - 25904264
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||    
T  25904219 ttatgccatttttcataagcttttttcagcttatttttataagttc 25904264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 43506009 - 43505940
Alignment:
Q  224 ttatgacaattttcataagctttttt-caacttattttcataagttcgtcaatatagctaataaaaacaa 292  Q
    |||||| | ||||||||||||||||| ||||||||||||||| | ||  |||| ||||| ||||||||||    
T  43506009 ttatgagagttttcataagctttttttcaacttattttcatatgatctccaatctagcttataaaaacaa 43505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 51630163 - 51630058
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaa 345  Q
    |||||| ||||||||||||| ||| |||| |||||| || |||| | |||||||| ||||  ||| |||| |||| ||| |||||||| | ||||| |||    
T  51630163 ttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgctatataaa 51630064  T
Q  346 cagctt 351  Q
     |||||    
T  51630063 tagctt 51630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 55064909 - 55064864
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||| ||||||  ||||||||||| |||||||||||||||||    
T  55064909 ttatgacatttttcaatagcttttttcatcttattttcataagttc 55064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 228 - 422
Target Start/End: Complemental strand, 32592656 - 32592463
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactt 327  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||| ||| |||||||||||||||||| ||||||||| |||| |||||||| ||    
T  32592656 gacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagcgtatacaaaa-caatttaacattattt 32592558  T
Q  328 tatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcc 422  Q
    |||||| | ||||||||| || |||||||| ||||||||||| | ||||| |||| ||||| ||||||||||||   |||||||| |||||||||    
T  32592557 tatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatgataagtgtttgtgctataagctacaaataagttgtttatcc 32592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 43279525 - 43279729
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||||||||  |||||||| |||| | |||||    
T  43279525 ttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagc--atacaaaaacaatttcacatt 43279622  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataaga--cgcaaataagctgtttatc 421  Q
    | |||||||| |  |||||||| ||||||||||| |||| | || | | |||| ||||| ||||||||| | ||||| |   ||||||||||||||||||    
T  43279623 attttatcttttgatataaaaatagcttatgcaagcttagaaattagcgcttaacatgataagtgcttgagttataaaaactgcaaataagctgtttatc 43279722  T
Q  422 caaacag 428  Q
    |||||||    
T  43279723 caaacag 43279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 224 - 401
Target Start/End: Complemental strand, 26202102 - 26201925
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||||||||||||||  ||| | | |||| |||| ||    
T  26202102 ttatgacaattttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatagca-gtacgagaccaatttaacgtt 26202004  T
Q  324 actttatct-tatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    | ||||||| | | ||||||||| ||||||||||| |||||| ||||   |||||||||| ||| ||||||||||||||    
T  26202003 attttatctctttgctataaaaatagcttatgcaagcttatatataagggcttatcatgataagcgcttgtgctataag 26201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 169 - 366
Target Start/End: Original strand, 39073630 - 39073827
Alignment:
Q  169 tgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaacttattttcataagtt 268  Q
    ||||||||||||| | |||||  |  |||| || ||||||||||| ||  |||| ||||||||||||||||||| ||  |||||||||||||||  ||||    
T  39073630 tgatttatttgagttcatctaccgacataatttttgtgagactgtttggaagaacttatgacaattttcataagtttcgttcaacttattttcactagtt 39073729  T
Q  269 cgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttataca 366  Q
    |  |||||||||| |||||||  ||||||||||||||||||| |||| |||| ||| |||||||| || | ||||||   ||||||||| ||||||||    
T  39073730 ctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaacgttattttatcttttaatgtaaaaatgtcttatgcaaacttataca 39073827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 234 - 429
Target Start/End: Original strand, 12464479 - 12464674
Alignment:
Q  234 tttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    ||||| |||||||||||| |||||||||| ||||||  ||| |||||| || |||| | |||||||||||||||||| |||| |||| ||| ||||||||    
T  12464479 tttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatctt 12464578  T
Q  334 atactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacaga 429  Q
     | ||| | ||| |||||||| || ||| ||||||  | |||||||||| |||||| || | ||||||   ||||||||| |||||||||||||||    
T  12464579 tttctacagaaatagcttatgtaagcttctacatatgcacttatcatgataagtgcgtgcgttataagctacaaataagccgtttatccaaacaga 12464674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 20952430 - 20952343
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  20952430 tttatgccaattttcattaacttttttcaacttattttcataagttctccaatatagctaataaaaacaacttatagcatataaaaaa 20952343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 15757654 - 15757866
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatac-aaaatcaatgtaacat 322  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||     ||||||| ||||| |||||||||||||||||| |||| |||| |||| |    
T  15757654 ttatgacaattttcagaagcttttttcagcttattttcatacgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaactt 15757753  T
Q  323 tactttatcttatactataaaaacagcttatgcaaccttatacataaact-------cttatcatgacaagtgcttgtgctataagacgcaaataagctg 415  Q
    || |||||| | | || || | | ||||||||  | ||||||||||| ||       |||||||||| ||| ||||||||||||||  | ||||||||||    
T  15757754 tattttatcattttctttagatatagcttatgtgagcttatacataagcttttatcgcttatcatgataagcgcttgtgctataagctgaaaataagctg 15757853  T
Q  416 tttatccaaacag 428  Q
    |||||||||||||    
T  15757854 tttatccaaacag 15757866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 223 - 351
Target Start/End: Original strand, 11201376 - 11201505
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttatttt-cataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaaca 321  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||  ||||||||   | ||||||||||||||| |||||||||| |||| | ||     
T  11201376 tttatgacaactttcataagcttttttcaactcatttttcataagttctccaatatagtatacaaaaacaacttatagtatatacaaaaacaattttacc 11201475  T
Q  322 ttactttatcttatactataaaaacagctt 351  Q
    ||| |||||||| || ||||||||||||||    
T  11201476 ttattttatcttttaatataaaaacagctt 11201505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 224 - 428
Target Start/End: Complemental strand, 41407376 - 41407171
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaat-caatgtaacat 322  Q
    ||||| || ||||||||||||| ||| |  ||||||||| ||||||   || | | || ||||||| ||||||||||||||||||||  |||| |||| |    
T  41407376 ttatggcatttttcataagcttgtttaaggttattttcacaagttctcaaagaaaacttataaaaataacttatagcatatacaaaaaacaatttaactt 41407277  T
Q  323 tactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcc 422  Q
    || |||||||| |  || | ||| |||||||| || |||||||||||   |||||||||| ||| ||||||||||||||  ||||| |||||||||||||    
T  41407276 tattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatgataagcgcttgtgctataagctgcaaacaagctgtttatcc 41407177  T
Q  423 aaacag 428  Q
    ||||||    
T  41407176 aaacag 41407171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 224 - 425
Target Start/End: Complemental strand, 41851609 - 41851408
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||||||||||| ||| |||| |||||||| |||  ||| ||||||  | ||||||||||||||||||||||||| |||| |||| ||    
T  41851609 ttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaacttt 41851510  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | | |||||| | ||||| ||| | ||  || || |||||| |||| |  ||| ||||| ||| |||||||||||| |  ||||||||| ||||||||||    
T  41851509 attgtatcttttcctatataaatatctcgtgtaagcttatatataagcgtttagcatgataagcgcttgtgctatatgctgcaaataagatgtttatcca 41851410  T
Q  424 aa 425  Q
    ||    
T  41851409 aa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 153 - 401
Target Start/End: Original strand, 42868393 - 42868634
Alignment:
Q  153 tagggccagtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaa 252  Q
    ||||||| ||||||| ||  ||||||||||||||||||||| |||  ||  |||| ||||| || ||||| ||||||||| |||||  |||||||||||     
T  42868393 tagggcctgtttggattgccttatttgagcttatctattggcatacgtttcgtgacactgtttgggagaacttatgacaa-tttca-cagcttttttcag 42868490  T
Q  253 cttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagctta 352  Q
    |||||||||||||||||  ||||||| || |  |||| | ||||    |||||||||| |||| |||| ||| |||||||| | |||| |||| ||||||    
T  42868491 cttattttcataagttctccaatataactta-caaaatagctta----atatacaaaaacaatttaactttattttatctttttctatgaaaatagctta 42868585  T
Q  353 tgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    || || ||||| ||||| | | |||||||| ||| ||||||||||||||    
T  42868586 tgtaaacttatgcataagcgcctatcatgataagcgcttgtgctataag 42868634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 12195027 - 12194885
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata-caaaatcaatgtaaca 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| || ||| ||||||| |||| |||||| ||||| ||||  ||      
T  12195027 tttatgacaattttcataagcttttttcaacttattttcacaagttctccaatataacttatataaacaacctataacatataccaaaaacaattgaatg 12194928  T
Q  322 ttactttatcttatactataaaaacagcttatgcaaccttata 364  Q
    | | |||||||| | ||||| |||||||||| |||| ||||||    
T  12194927 tcattttatcttttcctatagaaacagcttaagcaagcttata 12194885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 12289872 - 12289730
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata-caaaatcaatgtaaca 321  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||  | |||||||||||||||| ||| || ||||| |||| |||      
T  12289872 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataacatgtaccaaaaacaatttaatg 12289773  T
Q  322 ttactttatcttatactataaaaacagcttatgcaaccttata 364  Q
    | | |||||||| | || || |||||||||| |||| ||||||    
T  12289772 tcattttatcttttcctgtagaaacagcttaagcaagcttata 12289730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 39659505 - 39659708
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||| |||  ||||||||| ||| ||||| |||||||||||   ||||||||| |||||||||| ||||| |||| |||||| |||| |||| ||    
T  39659505 ttatgacaaattttctaagcttttgtcaccttatcttcataagttctctaatatagcttataaaaacaagttataacatagacaaaaacaatttaacgtt 39659604  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | | |||||| |  ||| |||| ||  ||| ||| ||||||||||| | |||||||||| |||   ||||||| ||||  ||||||||| ||||||||||    
T  39659605 attgtatcttttgttat-aaaatagtgtatccaaacttatacataagcgcttatcatgataagcatttgtgctctaagctgcaaataagttgtttatcca 39659703  T
Q  424 aacag 428  Q
    |||||    
T  39659704 aacag 39659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 237 - 401
Target Start/End: Original strand, 41241141 - 41241305
Alignment:
Q  237 cataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttata 336  Q
    ||||||||||||||| |||| ||||| |||||   ||| ||| || |  ||||| ||||||||||||||||||| |||| |||| | | |||||||| |     
T  41241141 cataagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaacttcattttatcttttc 41241240  T
Q  337 ctataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    ||||| ||| |||||||| || ||||| ||||| | | |||||||| ||||||||||||||||||    
T  41241241 ctatagaaatagcttatgtaagcttatccataagcgcatatcatgataagtgcttgtgctataag 41241305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 224 - 381
Target Start/End: Complemental strand, 45229585 - 45229429
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||   || |||||| || ||||||| | ||| ||||||||||| |||| |||| |     
T  45229585 ttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagcttatgaaaacaa-tgataacatatacaaaaacaatttaacctc 45229487  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatg 381  Q
    | |||||| | | ||||| ||| |||||||| || ||||||||||| | |||||||||    
T  45229486 attttatcgtttgctatagaaatagcttatgtaaacttatacataagcacttatcatg 45229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 290 - 428
Target Start/End: Complemental strand, 15305665 - 15305526
Alignment:
Q  290 caacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatg-acaagtg 388  Q
    |||||||||||| ||||||||  ||| |||||||| |||||| | | ||||||||| ||||||||||| |||||||| || | |||| |||| | ||  |    
T  15305665 caacttatagcaaatacaaaaataatttaacattattttatcatttgctataaaaatagcttatgcaagcttatacacaagcacttaccatgtataaacg 15305566  T
Q  389 cttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||| ||||| |||  |||||||||||||||||||||||||    
T  15305565 cttatgctaaaagttgcaaataagctgtttatccaaacag 15305526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 5745781 - 5745872
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||| |   ||||||||| ||| ||| ||||||||||||||| |||| ||||    
T  5745781 ttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatataaaaaaacaat 5745872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 20926578 - 20926532
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  20926578 tttatgacaattttcattagcttttttcaacttattttcataagttc 20926532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 24101002 - 24100910
Alignment:
Q  224 ttatgacaattttcataagctttttt-caacttattttcataagttcgtcaatatagctaataaaaacaacttatagca-tatacaaaatcaa 314  Q
    |||||||||| ||||||||||||||| | |||| |||| |||||||| ||||||||||| || ||||||| |||||| | |||||||||||||    
T  24101002 ttatgacaatattcataagctttttttctacttgtttttataagttcttcaatatagcttattaaaacaatttatagtattatacaaaatcaa 24100910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 238 - 401
Target Start/End: Original strand, 33319822 - 33319986
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac-attactttatcttata 336  Q
    |||||||||||||| |||||||||||||||||  ||| |||| | || ||||||  |||||| |||||||||| || | ||||  |||  ||||| | ||    
T  33319822 ataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaacttttatgttatcattta 33319921  T
Q  337 ctataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    ||||||||| || ||||| || ||| ||||||| |  |||||| || ||| ||||||||||||||    
T  33319922 ctataaaaatagtttatgtaaacttttacataagcgattatcaggataagcgcttgtgctataag 33319986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 427
Target Start/End: Complemental strand, 38010495 - 38010283
Alignment:
Q  215 tgagagaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatataca--aaatc 312  Q
    ||||| ||||||||||| |||| |||||||| ||||| |||||||  | |||||| |||| ||| || |   |||||||||||||||||||||  ||||     
T  38010495 tgagacaatttatgacattttttataagcttctttcagcttatttcgacaagttcttcaagataactta-ccaaacaacttatagcatatacatgaaat- 38010398  T
Q  313 aatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataag 412  Q
    ||| |||||||| |||||||| || |||| ||||| |||| | || |||| || |||   | |||||||| |||  |||||| ||||||  |||||||||    
T  38010397 aatttaacattattttatcttttaatatagaaacaacttacgtaagcttagacgtaagggcatatcatgataagcacttgtgatataagctgcaaataag 38010298  T
Q  413 ctgtttatccaaaca 427  Q
     |||||||| |||||    
T  38010297 ttgtttatctaaaca 38010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 293 - 428
Target Start/End: Original strand, 42659216 - 42659351
Alignment:
Q  293 cttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttg 392  Q
    |||||||||||||||||| |||| | || ||| |||| | | | | ||||||| |||||||| || ||||||||||| | |||||||||| |||||  ||    
T  42659216 cttatagcatatacaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatgataagtgtgtg 42659315  T
Q  393 tgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||| ||  ||||||||| |  ||||||||||||    
T  42659316 tgctattagctgcaaataagtttcttatccaaacag 42659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 1633656 - 1633746
Alignment:
Q  338 tataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||||| |||| || || | ||||||  ||||||||||| |||  ||| |||||||||  |||||||||||||||||||||||||    
T  1633656 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 1633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 23956038 - 23956092
Alignment:
Q  234 tttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaa 288  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||| ||||||    
T  23956038 tttcataagcttttttcaacttattttcataaattcttcaatacagcttataaaa 23956092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 43570351 - 43570297
Alignment:
Q  373 cttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||| |||||||    
T  43570351 cttatcatgataagtgcttgtgctataagctgcaaataagctgtttacccaaaca 43570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 229 - 426
Target Start/End: Complemental strand, 12795860 - 12795664
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttt 328  Q
    |||| |||||||||||||||||  |||| || |||||| ||  |||||||||| | ||||||| |||||||||||||||| | ||||  ||  ||||||     
T  12795860 acaactttcataagcttttttcggcttacttgcataagctcaccaatatagctta-aaaaacagcttatagcatatacaagaacaattaaaatttactta 12795762  T
Q  329 atcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaac 426  Q
    ||| | | |||| |||| |||||||| || |||||  | ||   |||||||||| |||  ||| ||||||||   |||||||| ||||||||||||||    
T  12795761 atccttttctatcaaaatagcttatgtaagcttatgaaaaagtgcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaaac 12795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 15305748 - 15305703
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  15305748 ttatggcaattttcataagtttttttcaacttattttcataagttc 15305703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 256 - 369
Target Start/End: Complemental strand, 20933797 - 20933684
Alignment:
Q  256 attttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgc 355  Q
    |||||||||||||   |||||||||| | |||||||||||| |||||||| | || |||| |||||||| |||||||| |  | |||||| || ||||||    
T  20933797 attttcataagttttccaatatagcttagaaaaacaacttagagcatatatagaagcaatttaacattattttatcttttgttgtaaaaatagattatgc 20933698  T
Q  356 aaccttatacataa 369  Q
    || | |||||||||    
T  20933697 aagcctatacataa 20933684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 40279468 - 40279403
Alignment:
Q  237 cataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcat 302  Q
    ||||| || ||||||||||||||||||||||||  |||||||||| || |||||||||||| ||||    
T  40279468 cataaactgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttatggcat 40279403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 6541747 - 6541817
Alignment:
Q  274 atatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaa 345  Q
    |||||||| || ||||||||||||| |||||| || |||||| |||||||| |||||||| |||||||||||    
T  6541747 atatagcttattaaaacaacttataacatata-aacatcaatttaacattattttatcttttactataaaaa 6541817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 2227240 - 2227095
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||||| | ||||||| ||||||||| |||||||  ||| |||  |||   |||||||||||| |||| |||||| |||| | |  ||    
T  2227240 ttatgacatttttcataaacatttttcagcttattttcgtaagttctacaaaatatttaagggaaacaacttataacatacacaaaaacaattttatttt 2227141  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    | |||||||| ||| ||| ||| |||||||| || || ||||||||    
T  2227140 attttatcttttaccatagaaatagcttatgtaagctcatacataa 2227095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 9395064 - 9395011
Alignment:
Q  374 ttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||||||| ||| |||||||||||||| |||||||||||| | ||||||||||    
T  9395064 ttatcatgataagagcttgtgctataagccgcaaataagctatgtatccaaaca 9395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 11863882 - 11863801
Alignment:
Q  347 agcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||| || ||||| ||||| | |||||||||||||||| ||||||| ||||  | ||||||| |||||||||| ||||    
T  11863882 agcttatgtaagcttatgcataagcgcttatcatgacaagtgtttgtgctgtaagctgaaaataagttgtttatccagacag 11863801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 14364197 - 14364262
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaat 311  Q
    |||||||||||||||||||||||| ||||  |||||  | ||||||||||||| | ||||||||||    
T  14364197 ttttcaacttattttcataagttcttcaaggtagctcctcaaaacaacttataacttatacaaaat 14364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 27695620 - 27695677
Alignment:
Q  253 cttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||| ||||||  |||||||||| ||||||||| |||||| |||||||||||    
T  27695620 cttattttcacaagttccccaatatagcttataaaaacagcttatatcatatacaaaa 27695677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 36125429 - 36125372
Alignment:
Q  230 caattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaa 287  Q
    |||||||| ||||||||||| |||||||||||||||||||  |||| ||||| |||||    
T  36125429 caattttcgtaagctttttttaacttattttcataagttctccaatttagcttataaa 36125372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 369
Target Start/End: Original strand, 41812088 - 41812231
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||   ||| ||||||  |  ||||| ||| |||||||||||||| |||| |||| |     
T  41812088 ttatgacatttttcataagcttttttcaactta-tttcctaagttttccaagatagct-tttgaaacatcttgtagcatatacaaaaacaatttaacttc 41812185  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    | |||| | | | | ||||||| |||||||| || |||||||||||    
T  41812186 attttaccatttgccataaaaatagcttatgtaagcttatacataa 41812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 1625974 - 1625878
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||||||||| |||||||| | |||||| || |||||| |||||||  ||| |||||| || ||||||||||||| | ||||| ||| |||| ||||    
T  1625974 ttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaac 1625878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 31744326 - 31744237
Alignment:
Q  336 actataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||| |||| | |||| |||| ||||||||||| | |||||||| |  |||||||||||||||||   ||||||||||||||| |||||||    
T  31744326 actatgaaaataacttacgcaagcttatacataagcgcttatcatta--agtgcttgtgctataagctacaaataagctgtttaaccaaaca 31744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 42420219 - 42420263
Alignment:
Q  224 ttatgacaattttcataagcttttttcaac-ttattttcataagt 267  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||    
T  42420219 ttatgacaattttcattagcttttttcaactttattttcataagt 42420263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 40279330 - 40279263
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcat 302  Q
    ||||||| || |||||| || ||||||||||||||  |||||||||| || |||||||||||| ||||    
T  40279330 ttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttatggcat 40279263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 40279400 - 40279333
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcat 302  Q
    ||||||| || |||||| || ||||||||||||||  |||||||||| || |||||||||||| ||||    
T  40279400 ttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttatggcat 40279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 42420356 - 42420419
Alignment:
Q  290 caacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttat 353  Q
    ||||||||| ||||||||||| |||| |||| ||| |||||||| | ||||||||| |||||||    
T  42420356 caacttatatcatatacaaaaacaatttaacgttattttatcttttgctataaaaatagcttat 42420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 1810724 - 1810648
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||| ||||||||| |||||||||||||  || |||| |||||| ||||||||||| |||| | ||||||||| ||||    
T  1810724 ataaacttttttcagcttattttcataaactcttcaagatagcttataaaaacaac-tataacttatacaaaaacaat 1810648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 9174953 - 9174908
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgag 218  Q
    ||||||||||||||||||||| |||| || ||||||||||| ||||    
T  9174953 ttatttgagcttatctattggcataagttatgtgagactgtttgag 9174908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 10258753 - 10258708
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||| || ||||||||||||||||| ||||||||| ||||||    
T  10258753 ttatgacagttctcataagcttttttcaatttattttcagaagttc 10258708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 425
Target Start/End: Complemental strand, 16451082 - 16451021
Alignment:
Q  364 acataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||| ||||||||||||  ||||||| |||| ||||  ||||||||| ||||||||||||    
T  16451082 acataagctcttatcatgatcagtgcttatgctgtaagctgcaaataagatgtttatccaaa 16451021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 19608746 - 19608815
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||||   |||||||||  | ||||||||||||||||  ||||||| ||||| |||||||||||    
T  19608746 cttatacataagtgcttatcatggtatgtgcttgtgctataagctgcaaatatgctgtatatccaaacag 19608815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 33981196 - 33981155
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataa 265  Q
    ||||||||  ||||||||||||||||||||||| ||||||||    
T  33981196 ttatgacacatttcataagcttttttcaacttaatttcataa 33981155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 40279260 - 40279175
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    ||||||| || |||||| || ||||||||||||||  ||| |||||| || ||||||||||||| | ||||| ||| |||| ||||    
T  40279260 ttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaaaacaatttaac 40279175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 40682391 - 40682436
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||| | |||||||| | ||||||||||||||||||||||||    
T  40682391 ttatgacattgttcataagttgttttcaacttattttcataagttc 40682436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 40682494 - 40682563
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||| | |||| ||||| ||| ||||| ||||| ||  ||||||||| |||||||||||||||    
T  40682494 cttatacataagcgcttaccatgataagcgcttgcgctatgagttgcaaataagatgtttatccaaacag 40682563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 8e-42; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 234 - 417
Target Start/End: Complemental strand, 39980793 - 39980610
Alignment:
Q  234 tttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| | ||||| |||| |||| ||| | ||| ||    
T  39980793 tttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcatgttcaaaaacaatttaacgttattgtatgtt 39980694  T
Q  334 atactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtt 417  Q
     | ||||||||| |||| |||||| |||||||||||   |||||||||| ||||| |||| |||||||  ||||||||||||||    
T  39980693 ctgctataaaaaaagctaatgcaaacttatacataagtgcttatcatgataagtgtttgtcctataagctgcaaataagctgtt 39980610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 226 - 427
Target Start/End: Original strand, 35959454 - 35959655
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    ||||||||||||| |||||||||||| |||||||||| || |||   ||||||||| ||| |||||||||| |||||||||||||  ||| |||| |||     
T  35959454 atgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaactttat 35959553  T
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||| | | ||||| ||| ||||||||  | ||||||||||| |||||||||||| ||| ||||||| ||||||  ||||||||||||||||||||||    
T  35959554 tttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatgataagagcttgtgatataagctgcaaataagctgtttatccaaa 35959653  T
Q  426 ca 427  Q
    ||    
T  35959654 ca 35959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 224 - 428
Target Start/End: Complemental strand, 20880550 - 20880347
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||  ||||||||  ||||||||||||||||| |||| |||| ||    
T  20880550 ttatgacaattttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaac-tt 20880452  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
      |||||| | | ||||||||| |||||||| || ||||||||||| | ||||| |||| ||  |||||||||||||   ||||||||| ||| ||||||    
T  20880451 gttttatcatttgctataaaaatagcttatgtaagcttatacataagcacttattatgataaccgcttgtgctataaactgcaaataagttgtctatcca 20880352  T
Q  424 aacag 428  Q
    |||||    
T  20880351 aacag 20880347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 224 - 398
Target Start/End: Original strand, 36631047 - 36631221
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||| ||||||| |||||||||||  |||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||| |||| |||| ||    
T  36631047 ttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtacaaaaacaatttaacttt 36631146  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctat 398  Q
    |||||||| | ||||||| ||| |||||| || |  ||||||||||   |||||||||| |||  ||||||||||    
T  36631147 actttatcctttactatagaaatagcttaagcgagtttatacataattgcttatcatgataagcacttgtgctat 36631221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 233 - 428
Target Start/End: Complemental strand, 20170588 - 20170393
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatct 332  Q
    ||||||||||||||||||||||||||||||| |||||   || ||| ||  ||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  20170588 ttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatatacaaaaacaatttaacattattttatct 20170489  T
Q  333 tatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    | | |  |||||| ||||| ||||| || |||||||| | |||||||||| |||   ||||| |||||   ||||||||| ||||| ||| |||||    
T  20170488 tttgcagtaaaaatagcttgtgcaagctgatacataagcgcttatcatgaaaagcagttgtgatataaactgcaaataagttgtttctcccaacag 20170393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 261 - 427
Target Start/End: Original strand, 30956659 - 30956825
Alignment:
Q  261 cataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaacct 360  Q
    |||||||||  ||| ||||||  | ||||||||||||||| ||||||||| |||| |||| ||| |||||||| | ||||| ||| |||||||| || ||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagct 30956758  T
Q  361 tatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||| ||||||  |||||||||| |||  |||||||||||||  ||||||||||||||||||||||||    
T  30956759 tatgcataaatgcttatcatgataagcccttgtgctataagctgcaaataagctgtttatccaaaca 30956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 261 - 427
Target Start/End: Original strand, 30972471 - 30972637
Alignment:
Q  261 cataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaacct 360  Q
    |||||||||  ||| ||||||  | ||||||||||||||| ||||||||| |||| |||| ||| |||||||| | ||||| ||| |||||||| || ||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagct 30972570  T
Q  361 tatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||| ||||||  |||||||||| |||  |||||||||||||  ||||||||||||||||||||||||    
T  30972571 tatgcataaatgcttatcatgataagcccttgtgctataagctgcaaataagctgtttatccaaaca 30972637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 47132454 - 47132314
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaacttattttcataagttcgtc 272  Q
    ||||||||||||||||| ||| |  | || ||||||||||| |  ||||| |||||| || ||| |||||||||||||||||||||||||||| |||  |    
T  47132454 ttatttgagcttatctactggca--agttttgtgagactgttttggagaacttatgaaaaatttaataagcttttttcaacttattttcataacttctcc 47132357  T
Q  273 aatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||    
T  47132356 aatatagcttataaaaacaacctatagcatatacaaaaacaat 47132314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 30443967 - 30443857
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  |||||||| | ||||||||| |||||||||||||||||| |||| |||| |     
T  30443967 ttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaatttaacttc 30443868  T
Q  324 actttatctta 334  Q
    | |||||||||    
T  30443867 attttatctta 30443857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 53789457 - 53789661
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||  ||  |||||| || | ||||||||||||||||||| ||| || | |||  ||    
T  53789457 ttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatataccaaaacattttaatttt 53789556  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | || ||||| | ||||| ||| |||||||| || |||| ||||||   |||||||||| ||| |||||||  |||||  |||| ||||  ||||| |||    
T  53789557 agttcatcttttcctatagaaatagcttatgtaagcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaattaagtcgtttaccca 53789656  T
Q  424 aacag 428  Q
    |||||    
T  53789657 aacag 53789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 13715568 - 13715660
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagct--aataaaaacaacttatagcatatacaaaatcaa 314  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||   |||||| |||   |||||||||||||||| |||||||||||||||    
T  13715568 ttatgacaactttcataagcatttttcaacttattttcataagttgtccaatatcgcttatataaaaacaacttatatcatatacaaaatcaa 13715660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 224 - 401
Target Start/End: Complemental strand, 4401118 - 4400943
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||  |||||||   | | ||||||||||||||||||||| |||  ||| |||| ||    
T  4401118 ttatgacaatttccataagctgtttttaacttattttcataagttctccaatata---acttaaaacaacttatagcatatacgaaaataatttaacgtt 4401022  T
Q  324 actttatcttatactat-aaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    | || | ||| |  ||| ||||| ||||||||||| |||||||||||   ||||| || | ||||| ||||||||||||    
T  4401021 atttcaccttttggtataaaaaaaagcttatgcaaacttatacataagtacttataataataagtgtttgtgctataag 4400943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 46478763 - 46478684
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtca--atatagctaataaaaacaacttatagca 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||  |||||||| |||||| ||||||||||||    
T  46478763 ttatgacagttttcataagcttttttcaacttattttcataagttctccaatatatagcttataaaaccaacttatagca 46478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 12862256 - 12862419
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactt 327  Q
    ||||||||||||||||||||||||||        ||||||||  |||||||||| || ||||||||||||||||||||||||| |||| |||   || ||    
T  12862256 gacaattttcataagcttttttcaac--------ataagttctccaatatagcttatgaaaacaacttatagcatatacaaaa-caatttaaatctattt 12862346  T
Q  328 tatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataa 400  Q
    |||||| | ||||||||| || |||||||| |||| ||||||   |||||||| | ||| |||| ||||||||    
T  12862347 tatcttttgctataaaaatagattatgcaagcttaaacataagtgcttatcattataagcgcttttgctataa 12862419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 37689303 - 37689149
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |    ||||| || ||||||||||| |||||||||||||||| |||| |  | ||    
T  37689303 ttatgacaattttca-aagcttttttcaacttattttcataagtgctctgatata-ctcataaaaacaacctatagcatatacaaaaacaattt--cttt 37689208  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatga 382  Q
    | |||||||| | ||||| ||| ||||||||  | ||||||| ||| | ||||||||||    
T  37689207 attttatcttttgctatagaaatagcttatgtgaacttatacgtaagcacttatcatga 37689149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 901985 - 901912
Alignment:
Q  237 cataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||||||||  |||| |||||| ||||    
T  901985 cataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaaagtataacatatataaaa 901912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 4526373 - 4526444
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatat 304  Q
    |||||||||||| |||| || |||||||||||||||| |||| ||| || ||||||||||||||||||||||    
T  4526373 ttttcataagctgtttttaagttattttcataagttcttcaaaataacttataaaaacaacttatagcatat 4526444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 20257608 - 20257513
Alignment:
Q  226 atgacaattttcataagcttttttcaacttatttt-cataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    ||||||||||||||||| |||||  |||||||||| |||||| ||  ||||||||||   |||||||||||||||||||||||||| |||| ||||    
T  20257608 atgacaattttcataagttttttaaaacttatttttcataagctctccaatatagcttcaaaaaacaacttatagcatatacaaaaacaatttaac 20257513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 274 - 428
Target Start/End: Original strand, 24684869 - 24685023
Alignment:
Q  274 atatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactc 373  Q
    |||| ||| |||||| ||||||||||||||||||||| ||||  ||  ||| |||||||| | ||||||||| |||||||| || ||||| || || | |    
T  24684869 atattgcttataaaagcaacttatagcatatacaaaaacaattaaaatttattttatctttttctataaaaatagcttatgtaaacttatgcaaaagcgc 24684968  T
Q  374 ttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||  ||   ||||||||||||  |||||||| | || |||||||||||    
T  24684969 ttatcatgatgagaatttgtgctataagctgcaaataaaccgtctatccaaacag 24685023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 1508694 - 1508779
Alignment:
Q  341 aaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaac 426  Q
    ||||| || |||||||| ||||||||||| | |||||||||| |||  |||||||||||||  ||||||||||||||| |||||||    
T  1508694 aaaaatagtttatgcaagcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttccaaac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 232 - 428
Target Start/End: Original strand, 3845566 - 3845762
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatc 331  Q
    ||||| |||| ||||||||| |||||||||||||||||  ||| ||| || || |||||| | | ||||||||| |||| || |  ||| | | ||||||    
T  3845566 atttttataatcttttttcagcttattttcataagttctccaagataacttatgaaaacagcatgtagcatatagaaaaacatttcaacttaattttatc 3845665  T
Q  332 ttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||   ||||| ||| |||||||| || |||||||| || | ||||| |  | ||||||||||||||| |   ||||||||| |||||||||||||||    
T  3845666 tttctctatagaaatagcttatgtaagcttatacaaaagcacttattacaataagtgcttgtgctatgaactgcaaataagttgtttatccaaacag 3845762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 49556932 - 49556833
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagc-atatacaaaatcaatgtaacat 322  Q
    |||||||||||||||||||||||||||||||||||| |  |||| |  || ||||||  |||||||||||| | ||| |||||||||| |||| ||||||    
T  49556932 ttatgacaattttcataagcttttttcaacttatttcctcaagtcctccagtatagcctataaaaacaactcaaagcgatatacaaaaacaatctaacat 49556833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 18405831 - 18405913
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||| ||||||||| ||||||  | |||| ||||||||||||  ||| |||||| || |||||||||||||||||||||||||    
T  18405831 gacacttttcataatctttttcaagcttaatttcataagttctccaagatagcttatgaaaacaacttatagcatatacaaaa 18405913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 35696298 - 35696244
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaa 292  Q
    ||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||    
T  35696298 ataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaa 35696244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 31365184 - 31365225
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataa 265  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  31365184 ttatgacaattttcataagcttttttcaactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 347 - 428
Target Start/End: Original strand, 31365391 - 31365472
Alignment:
Q  347 agcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||| |||||||||||   |||||||||| ||   |||||||||||||  |||||||||||||||||||| ||||    
T  31365391 agcttatgcaagcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatccacacag 31365472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 36189639 - 36189531
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||||||| |    ||||||||||||||||  ||||||| || ||||||| | |||||| ||||||||||| |||| |||| ||    
T  36189639 ttatgacaattttcacaagcttttatggt-ttattttcataagttctccaatatatcttataaaaatagcttatatcatatacaaaaacaatttaacttt 36189541  T
Q  324 actttatctt 333  Q
    | ||||||||    
T  36189540 attttatctt 36189531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 49034291 - 49034380
Alignment:
Q  256 attttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaa 345  Q
    ||||||| ||||||  |||||||||| |||||||||||||||||||||| || || |||| ||||  || |||||||| | |||||||||    
T  49034291 attttcagaagttctccaatatagcttataaaaacaacttatagcatatgcacaaacaatttaacggtattttatcttttgctataaaaa 49034380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 401
Target Start/End: Original strand, 29520516 - 29520651
Alignment:
Q  265 agttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttata 364  Q
    ||||| ||||| ||||| |||||||||||||||||||  || || | |||| |||| ||| ||| |||| | |||| |||| ||||||||||| ||||||    
T  29520516 agttcttcaatgtagcttataaaaacaacttatagcaattagaagaacaatttaacgttattttctcttttgctat-aaaatagcttatgcaagcttata 29520614  T
Q  365 cataaactcttatcatgacaagtgcttgtgctataag 401  Q
    |||||   ||||| |||| ||||| || |||||||||    
T  29520615 cataagtgcttattatgataagtgtttatgctataag 29520651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 35394493 - 35394561
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaaca 291  Q
    ||||||||| | |||||||||| |||||||||||||||||||| ||| |||| |||||| || ||||||    
T  35394493 tttatgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaaca 35394561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 47132302 - 47132247
Alignment:
Q  373 cttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||| ||||||||||||||||||  | ||||||| |||||||||||||||    
T  47132302 cttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaacag 47132247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 21367741 - 21367667
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    |||||||| | |||| ||||| |||||| |||||||||||||||||  ||| |||||| || |||||||||||||    
T  21367741 ttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 50600191 - 50600261
Alignment:
Q  241 agcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaat 311  Q
    |||| |||||| |||||||||||||||||  |||||||||| || |||||| |||||||| ||| ||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagcttattcaaaat 50600261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 1816649 - 1816536
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatc 331  Q
    ||||||||| ||| |||||| |||||||| ||||| ||  || ||||||| || ||||||||||||| | ||||||||| || | | || ||| ||||||    
T  1816649 attttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatc 1816550  T
Q  332 ttatactataaaaa 345  Q
    || || ||||||||    
T  1816549 ttttattataaaaa 1816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 51929353 - 51929434
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    ||||||||||||||||| |||||||||| || | | |||||||||    ||||||||| | ||||| |||||||||||||||    
T  51929353 ttatgacaattttcataggcttttttcatctcactatcataagttataaaatatagcttagaaaaaaaacttatagcatata 51929434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 584196 - 584128
Alignment:
Q  161 gtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatga 229  Q
    ||||||| ||| ||||||||||||||||| | | |||| |||||||||||||| |  ||||||||||||    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatga 584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 265 - 369
Target Start/End: Complemental strand, 5331326 - 5331223
Alignment:
Q  265 agttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttata 364  Q
    ||||| ||||| ||||| |||||||||||||||||||  || || | |||| |||| ||| ||| |||| | |||| |||| ||||||||||| ||||||    
T  5331326 agttcttcaatgtagcttataaaaacaacttatagcaattagaagaacaatttaacgttattttctcttttgctat-aaaatagcttatgcaagcttata 5331228  T
Q  365 cataa 369  Q
    |||||    
T  5331227 cataa 5331223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 26911659 - 26911619
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcata 264  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  26911659 ttatgacaattttcataagtttttttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 43015617 - 43015665
Alignment:
Q  221 aatttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||| ||||| ||||||| ||||||||||||| |||||||||||||    
T  43015617 aatttattacaatgttcataaacttttttcaacttgttttcataagttc 43015665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 36887567 - 36887504
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    |||||||| | |||||| ||||||||||||||||| |||| || ||| || |||||||||||||    
T  36887567 ttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 253 - 379
Target Start/End: Complemental strand, 584091 - 583965
Alignment:
Q  253 cttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagctta 352  Q
    |||| |||||||||||| |||| |||||| || |||  ||||||||||||  |||||| |||| |||| ||| |||||| | | ||||| ||| | ||||    
T  584091 cttaatttcataagttcttcaagatagcttatgaaactaacttatagcatgaacaaaaacaatttaactttattttatcattttctatagaaataactta 583992  T
Q  353 tgcaaccttatacataaactcttatca 379  Q
    || || ||||||| ||| | |||||||    
T  583991 tgtaagcttatacgtaagcacttatca 583965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 28795852 - 28795894
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  28795852 tgacaattttcttaagctcttttcagcttattttcataagttc 28795894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 390 - 428
Target Start/End: Original strand, 42747913 - 42747951
Alignment:
Q  390 ttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  42747913 ttgtgctataagttgcaaataagctgtttatccaaacag 42747951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 944636 - 944591
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||||||| ||||| |||||||||||||| ||||||| ||||    
T  944636 ttatgacaatttccataatcttttttcaacttactttcatatgttc 944591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 19983848 - 19983804
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||    
T  19983848 ttatgagatttttcataagcttttt-caacttattttcataagttc 19983804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 25925822 - 25925774
Alignment:
Q  217 agagaatttatgacaattttcataagcttttttcaacttattttcataag 266  Q
    |||||| |||||||| | |||||||||| |||||||||||||||||||||    
T  25925822 agagaacttatgaca-tgttcataagctgttttcaacttattttcataag 25925774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 347
Target Start/End: Complemental strand, 26878189 - 26878068
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    |||||| | ||||||| || |||||| | ||||||||| | ||| |||| ||||||||| ||||||||||||| |   ||||||  |||| |||| |||     
T  26878189 atgacattgttcataaactgttttcagcatattttcattaattcttcaagatagctaatgaaaacaacttataactcgtacaaacacaatttaaccttag 26878090  T
Q  326 tttatcttatactataaaaaca 347  Q
    |||||||| | ||||| |||||    
T  26878089 tttatcttttgctatagaaaca 26878068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 26990502 - 26990571
Alignment:
Q  239 taagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaa 308  Q
    ||||||||||||| |||||||||||||||||  | | |||||| |  |||||||||| |||||| |||||    
T  26990502 taagcttttttcagcttattttcataagttctccgagatagcttaggaaaacaacttgtagcatgtacaa 26990571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 31365120 - 31365169
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgagagaa 222  Q
    ||||||||||||||||||||| |||| || ||||||||||| || |||||    
T  31365120 ttatttgagcttatctattggcataagttttgtgagactgtttgggagaa 31365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 35574864 - 35574908
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||    
T  35574864 ttatgacaattttcataag-ttttttctgcttattttcataagttc 35574908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 43062764 - 43062711
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatata 278  Q
    |||| ||||||||| |||||||||||| ||| |||||||||||||  |||||||    
T  43062764 tatggcaattttcacaagcttttttcagcttcttttcataagttctccaatata 43062711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 44747418 - 44747487
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatataca 307  Q
    |||||||| ||||| ||||||||||||||||   ||| |||||| || |||||| |||||||| ||||||    
T  44747418 ataagcttctttcagcttattttcataagttttccaagatagcttatgaaaacagcttatagcctataca 44747487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 47249604 - 47249653
Alignment:
Q  374 ttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    ||||||||| ||||||||||| ||||||  ||||||||||| ||||||||    
T  47249604 ttatcatgataagtgcttgtgttataagctgcaaataagctatttatcca 47249653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 247 - 316
Target Start/End: Complemental strand, 47587519 - 47587450
Alignment:
Q  247 tttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatg 316  Q
    |||||||| |||||| |||||    |||||||| | |||||||||||||||| ||||||||||| |||||    
T  47587519 tttcaactaattttcttaagtcatccaatatagtttataaaaacaacttataacatatacaaaaacaatg 47587450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 49092820 - 49092771
Alignment:
Q  257 ttttcataagttcgtcaatatagctaataaaaacaacttatagcatatac 306  Q
    |||||||||||||   ||||||||| |||||||||||||| |||||||||    
T  49092820 ttttcataagttctctaatatagcttataaaaacaacttacagcatatac 49092771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 3e-41; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 230 - 428
Target Start/End: Original strand, 1510312 - 1510509
Alignment:
Q  230 caattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttta 329  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||| |||| |||||||||||||||| | ||||||||| ||||  ||||||| ||||    
T  1510312 caattttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctatacaaaaacaattgaacatta-ttta 1510410  T
Q  330 tcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||| |  | |||||| ||||| ||||| |||||| ||||   ||||||| || ||| |||||||||||||||  ||||||||||||||||||||||||    
T  1510411 tcttttgttttaaaaatagcttttgcaagcttatatataagtgcttatcaagataagcgcttgtgctataagatacaaataagctgtttatccaaacag 1510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 224 - 380
Target Start/End: Complemental strand, 42174929 - 42174775
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||  | | |||||||    
T  42174929 ttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaa--actttaacatt 42174832  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcat 380  Q
    |||||||||| |  |||||||| ||| ||||||| ||||||||||| | ||||||||    
T  42174831 actttatcttttgatataaaaatagcctatgcaagcttatacataagcccttatcat 42174775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 224 - 427
Target Start/End: Original strand, 3234011 - 3234222
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaaca-- 321  Q
    |||| ||| |||||||||| ||||||| ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||| |||||      
T  3234011 ttataacagttttcataagtttttttctacttattttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaacaat 3234110  T
Q  322 ------ttactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctg 415  Q
          ||  |||||||| | |||| || | ||||||||||  |||||| |||| | |||||||||| ||| ||||||||||||||  ||||| ||| |     
T  3234111 ttaacgttgttttatcttttgctatgaatatagcttatgcacgcttatatataagcgcttatcatgataagcgcttgtgctataagttgcaaacaagtta 3234210  T
Q  416 tttatccaaaca 427  Q
     |||||||||||    
T  3234211 gttatccaaaca 3234222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 14576650 - 14576853
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||   ||||||||| ||||||| || ||||||||||||||||| |||| |||| ||    
T  14576650 ttatgacaattttcaaaagcttttttcagcttattttca-aagttctctaatatagcttataaaaaaaaattatagcatatacaaaaacaatttaacttt 14576748  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||| | ||||||  ||| ||||||    | |||||| ||||   |||||||||| ||| ||||||||||||||  | ||||||| |||||||||     
T  14576749 attttatcctttactatggaaatagcttacatgagcttataaataagtgcttatcatgataagagcttgtgctataagctggaaataagatgtttatccc 14576848  T
Q  424 aacag 428  Q
    |||||    
T  14576849 aacag 14576853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 17603380 - 17603476
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  17603380 ttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaac 17603476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 49938821 - 49938735
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||| |||||||||||    
T  49938821 ttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaacaacttataacatatacaaaa 49938735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 231 - 427
Target Start/End: Complemental strand, 1509818 - 1509623
Alignment:
Q  231 aattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttat 330  Q
    |||| |||||||||||||||||||||||| || ||||||  ||| | |||| |||||||||||||||  ||||||||||| ||||  | ||||| ||| |    
T  1509818 aattctcataagcttttttcaacttatttacacaagttctccaacagagcttataaaaacaacttattacatatacaaaaacaatacagcatta-tttgt 1509720  T
Q  331 cttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||| | || |||||| || | |||||| |||||| |||| | |||||||||| ||||| ||||||| ||||    ||||||||||||||||||||||    
T  1509719 cttttgctgtaaaaataggtcatgcaagcttatatataagcacttatcatgataagtgattgtgctgtaagctaaaaataagctgtttatccaaaca 1509623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 224 - 354
Target Start/End: Original strand, 24915047 - 24915177
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||  ||| | |||| || |||||| |||||||||||||||||| |||| |||| ||    
T  24915047 ttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaatttaacttt 24915146  T
Q  324 actttatcttatactataaaaacagcttatg 354  Q
    | |||||||| | ||||| ||| || |||||    
T  24915147 attttatcttctgctatagaaatagtttatg 24915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 224 - 369
Target Start/End: Original strand, 51929535 - 51929681
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  |||||||| | ||||||||| ||||  ||||||| |||| |||| | |||||    
T  51929535 ttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagcttaaggcatatataaaaacaattttacatt 51929634  T
Q  324 actttatcttatactataa-aaacagcttatgcaaccttatacataa 369  Q
      |||||||| | |||||| ||| ||| ||||||| |||| ||||||    
T  51929635 ggtttatcttttgctataataaaaagcgtatgcaagcttagacataa 51929681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 229 - 429
Target Start/End: Complemental strand, 473233 - 473035
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttt 328  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| | || ||||||||||||||||||||| || ||| |||| |||| ||| |||    
T  473233 acaattttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaactttatttt 473134  T
Q  329 atcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    | ||| | ||  |||||  |||||  ||| ||   |||||| | |||| ||||| ||| |||| || | ||||  ||||||||| |||||||||||||||    
T  473133 accttttgctgaaaaaattgcttaatcaaact--aacataagcgcttaccatgataagcgcttttgttgtaagctgcaaataagttgtttatccaaacag 473036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 231 - 354
Target Start/End: Complemental strand, 47432162 - 47432040
Alignment:
Q  231 aattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttat 330  Q
    |||||||| |||||||||||| ||||||||||||| ||| |||||||| || || |||||| |||||||||||| ||||| |||| |||| ||| |||||    
T  47432162 aattttcacaagcttttttcagcttattttcataaattcttcaatataacttat-aaaacaccttatagcatattcaaaaacaatttaactttattttat 47432064  T
Q  331 cttatactataaaaacagcttatg 354  Q
    ||| | ||||||||| ||||||||    
T  47432063 ctttttctataaaaatagcttatg 47432040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 51688778 - 51688576
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||| ||| |||||||| |||| |||||||||| |  ||  |||||| |  ||||||||||||||||| ||||||| |||| || | ||    
T  51688778 ttatgacacttttcagaagtttttttcagcttaatttcataagt-ctccacgatagcttacgaaaacaacttatagcatgtacaaaaacaatttatcttt 51688680  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||| | ||| |||| ||| || |||||| |||||| |||||||||| |||  ||||| |||||||  ||||||||| ||||||||||    
T  51688679 attttatcttttcctacataaatagctcatgtaagcttatatataaacacttatcatgataagcacttgtactataagctgcaaataagttgtttatcca 51688580  T
Q  424 aaca 427  Q
    ||||    
T  51688579 aaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 36872805 - 36872720
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||||| ||||||||    
T  36872805 ttatgacaattttgataagcttttt-caacttattttcataagttctgcaatatagcttgtaaaaacaacttatagcacatacaaaa 36872720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 224 - 345
Target Start/End: Original strand, 41184646 - 41184767
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||||| |||||||||||||||||||||||||   |||||| |   |||||| ||| |||||  |||||||||| |||| |||||||    
T  41184646 ttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatatacaaaaacaatttaacatt 41184745  T
Q  324 actttatcttatactataaaaa 345  Q
    | |||||||| | |||||||||    
T  41184746 attttatcttttgctataaaaa 41184767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 232 - 428
Target Start/End: Original strand, 41195197 - 41195394
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattact-ttat 330  Q
    ||||| |||||||||||||| |||||||||||||||||  ||| |||| | || ||||||  | |||| |||||||||| || | |||| ||  | ||||    
T  41195197 attttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagttgatagtatatacaaaaacagtttaacttttatgttat 41195296  T
Q  331 cttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    | | ||||||||||| || ||||| || ||||||||||| |  |||||| || ||| ||||||||||||||  ||||||||| | |||||||||||||    
T  41195297 catttactataaaaatagtttatgtaaacttatacataagcgattatcaggataagcgcttgtgctataagctgcaaataagttatttatccaaacag 41195394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 229 - 401
Target Start/End: Complemental strand, 18556994 - 18556824
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttt 328  Q
    ||||||| |||||||||||||||||||| |||||||| ||    |||||||||  ||||| ||||||||||| ||||||||| |||| ||||| || |||    
T  18556994 acaatttccataagcttttttcaactta-tttcataatttttcaaatatagcttgtaaaagcaacttatagcgtatacaaaa-caatttaacaatatttt 18556897  T
Q  329 atcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    ||||| | | ||||||| ||||||| ||| |||||||| || | ||  ||| || ||||||||||||||||||    
T  18556896 atcttttgcaataaaaatagcttatacaagcttatacacaagcgctcgtcacgataagtgcttgtgctataag 18556824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 251 - 426
Target Start/End: Original strand, 33541731 - 33541906
Alignment:
Q  251 aacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagct 350  Q
    ||||||||| ||||||||| | ||| ||||| |||||||||||||| ||||| |||||||  ||| |||||| | | |||| |   ||||||||| | ||    
T  33541731 aacttatttacataagttctttaatctagcttataaaaacaacttagagcatgtacaaaaagaatttaacatcattatatccttagctataaaaatatct 33541830  T
Q  351 tatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaac 426  Q
    ||| ||| ||||||||||| | |||||||||| ||   ||||||||||||   ||||||||| |||||||||||||    
T  33541831 tattcaagcttatacataagcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaaac 33541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 231 - 362
Target Start/End: Complemental strand, 36872332 - 36872204
Alignment:
Q  231 aattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac-attacttta 329  Q
    |||||||||||||||||||||||||| ||||||| | ||  ||||||||||| |||||||||||||||  | |||||||| |||| |||| |||| ||||    
T  36872332 aattttcataagcttttttcaacttaatttcatatgctc--caatatagctagtaaaaacaacttata--acatacaaaaacaatttaacaattatttta 36872237  T
Q  330 tcttatactataaaaacagcttatgcaacctta 362  Q
    |||| | ||||||||| ||||| ||||| ||||    
T  36872236 tcttttgctataaaaatagcttgtgcaatctta 36872204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 220 - 310
Target Start/End: Complemental strand, 36872666 - 36872576
Alignment:
Q  220 gaatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| |||||  |||| || ||  |||||||||||| ||||||||||||||    
T  36872666 gaatttatgaaaattttcataatcttttttcaacttattttcattagttctacaatgtaccttgtaaaaacaacttgtagcatatacaaaa 36872576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 33546455 - 33546535
Alignment:
Q  230 caattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||||||||||||  ||| |||||||||||| || ||||| ||||| |||||||||||||| |||||||||||||    
T  33546455 caattttcataagctttttcaaacgtattttcataagctcttcaatctagcttataaaaacaacttagagcatatacaaaa 33546535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 272 - 428
Target Start/End: Complemental strand, 41505712 - 41505557
Alignment:
Q  272 caatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaac 371  Q
    |||||||||| ||||||||| |||||| ||||||| ||| |||| |||| ||| ||||  || | ||||||||| |||||||| || |  || ||||| |    
T  41505712 caatatagcttataaaaacagcttataacatatacgaaaacaatttaactttaatttacgtttt-ctataaaaatagcttatgtaagccaatgcataagc 41505614  T
Q  372 tcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
     |||||||| | ||| | ||||||||||||  |||||||||||||||||||||||||    
T  41505613 acttatcatcataagcgtttgtgctataagctgcaaataagctgtttatccaaacag 41505557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 226 - 427
Target Start/End: Complemental strand, 17830222 - 17830025
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    |||||| |||||||||||||||||||||||||||||| ||||   |||| || ||  || |||| ||||| ||||||||||||||  | | |||| |||     
T  17830222 atgacatttttcataagcttttttcaacttattttcaaaagt---tcaagattgcatatgaaaataacttgtagcatatacaaaaatagt-taactttat 17830127  T
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||| | | ||||||||| |||||||| || | |||| ||||   |||||||||| ||||||||||| ||||||  | | ||| | ||||||||||||    
T  17830126 tttatcatttgctataaaaatagcttatgtaatcgtatagataagtgcttatcatgataagtgcttgtgatataagctgaagatatgttgtttatccaaa 17830027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 5741622 - 5741532
Alignment:
Q  338 tataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||| |||||||| || ||||||||||| | |||||||||| | |||||||||||||||| | |||||||| | |||||||||||||    
T  5741622 tataaaaatagcttatgtaaacttatacataagcgcttatcatgataggtgcttgtgctataagccacaaataagatatttatccaaacag 5741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 14385808 - 14385917
Alignment:
Q  273 aatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaact 372  Q
    ||||||||| | |||||||||||||| || |||||||| |||| |||||||| | |||||| | ||||||||| || || ||| | ||||||||||| ||    
T  14385808 aatatagcttacaaaaacaacttataacagatacaaaaacaatttaacattattctatcttttgctataaaaatagtttctgccagcttatacataagct 14385907  T
Q  373 cttatcatga 382  Q
    ||||||||||    
T  14385908 cttatcatga 14385917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 30286515 - 30286592
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagca 301  Q
    ||||||||||||||||||||||||||||||| | |||  | ||||| |||| |||||| |||||||||||||||||||    
T  30286515 ttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaacaacttatagca 30286592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 37631558 - 37631711
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattact 326  Q
    |||||||||||| |||||||||||| |||||||||||||||||  |||||||||| | ||||||| || ||| |||| |||||| |||| || | | | |    
T  37631558 tgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt 37631657  T
Q  327 ttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcat 380  Q
    |||||||   ||||||| | |||||||| || |||||  |||| | ||||||||    
T  37631658 ttatctttctctataaagatagcttatgtaagcttatgtataagcgcttatcat 37631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 43230769 - 43230845
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcata 303  Q
    ||||| |||| |||||||||||||||||||||||||| |||||  |||||||||  |||| ||||||||||||||||    
T  43230769 tgacagtttttataagcttttttcaacttattttcattagttctccaatatagcctataagaacaacttatagcata 43230845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 223 - 333
Target Start/End: Complemental strand, 13810073 - 13809963
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    |||||||||||||||| ||| |||| | | |||||||||| ||||||   ||||||| | ||||||||||  |||||||||||||||| |||| |||| |    
T  13810073 tttatgacaattttcaaaagtttttcttagcttattttcacaagttctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaactt 13809974  T
Q  323 tactttatctt 333  Q
    || ||||||||    
T  13809973 tattttatctt 13809963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 235 - 428
Target Start/End: Original strand, 27820344 - 27820530
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctta 334  Q
    |||||||||| |||||| ||||||||||||| |||  ||| |||||| ||||||||| | |||||| |||||| || |||| || | ||| ||||| ||     
T  27820344 ttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaatttagctttattttatatt- 27820442  T
Q  335 tactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||| ||||||| |      | | | || | |||||||||| ||| |||| |||||||||  ||||||||| |||||||||||||||    
T  27820443 tactataaaaatagcttatac------acaaacaagcccttatcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacag 27820530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 224 - 385
Target Start/End: Complemental strand, 27976678 - 27976508
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttca---------taagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaa 314  Q
    |||||||| ||||||||||||||||||| ||||||||||         |||||||   || |||||| || ||||||||||||||||||||||||| |||    
T  27976678 ttatgacatttttcataagcttttttcagcttattttcattatttcattaagttctcgaagatagcttatgaaaacaacttatagcatatacaaaaacaa 27976579  T
Q  315 tgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaa 385  Q
    | |||| ||  |  ||| | | ||||||||| |||||||| || |||||||||||   |||||||||||||    
T  27976578 tttaactttgttcaatcatttgctataaaaatagcttatgtaagcttatacataaggacttatcatgacaa 27976508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 34290299 - 34290201
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    |||||||| | |||||| ||||||||||||||||| |||| |||||| || |||||| |||||||| |||||||||| ||  |||| ||| ||||||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatacaaaataaaattaactttattttatctt 34290201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 428
Target Start/End: Complemental strand, 14331784 - 14331659
Alignment:
Q  303 atacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataaga 402  Q
    |||||||| |||| |||| ||| |||||||| | || || ||| ||||||||  | |||||||||||   |||||||||| ||| ||||||||||||||     
T  14331784 atacaaaaacaatttaactttattttatcttgttctgtagaaatagcttatgttagcttatacataagtgcttatcatgagaagcgcttgtgctataagc 14331685  T
Q  403 cgcaaataagctgtttatccaaacag 428  Q
      ||||||||||||||||| ||||||    
T  14331684 ttcaaataagctgtttatctaaacag 14331659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 27970289 - 27970382
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtc-aatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||  | || |||| | ||  |||||||||||||||||||||||| ||||    
T  27970289 tttatgacatttttcataagcttttttcagtttattttcataagttccccaaaaatagtttatggaaacaacttatagcatatacaaaaacaat 27970382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 5709694 - 5709619
Alignment:
Q  230 caattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatac 306  Q
    ||||||||||||||||||| ||||||||||||| ||||||  ||||||||||  |||||||| |||||| |||||||    
T  5709694 caattttcataagcttttt-caacttattttcacaagttctccaatatagcttctaaaaacaccttataccatatac 5709619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 340 - 428
Target Start/End: Original strand, 17727207 - 17727295
Alignment:
Q  340 taaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||| ||||||||||||||||||  ||| | |||||| ||| ||||||||||||||||||   || ||||| |||||||||||||||    
T  17727207 taaaaatagcttatgcaaccttatatctaagcgcttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacag 17727295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 30581861 - 30581746
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatac 337  Q
    ||||||| ||||||||||||||||||||| ||   ||||| ||| ||||||| ||||||||||||||| |||| |||| |||| ||| || ||| | | |    
T  30581861 ataagctgttttcaacttattttcataagctcccaaatatggcttataaaaa-aacttatagcatataaaaaaacaatttaactttatttcatcgttttc 30581763  T
Q  338 tataaaaacagcttatg 354  Q
    |||||||| ||||||||    
T  30581762 tataaaaatagcttatg 30581746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 5720941 - 5720851
Alignment:
Q  338 tataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||| |||||| | || ||||||||||| | |||||||||| | ||||||||| |||||| | |||||||| | |||||||||||||    
T  5720941 tataaaaatagcttacgtaaacttatacataagcgcttatcatgataggtgcttgtgttataagccacaaataagatatttatccaaacag 5720851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 353
Target Start/End: Complemental strand, 7862149 - 7862023
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattact 326  Q
    |||||||||||| ||||||| ||   ||||||||| || ||||  | |||||||| ||| ||||| ||||||||||| |||||| |||| || ||| | |    
T  7862149 tgacaattttcacaagctttctttggcttattttcttatgttctgcgatatagcttatagaaacagcttatagcatagacaaaaacaatttaccatcatt 7862050  T
Q  327 ttatcttatactataaaaacagcttat 353  Q
    ||||||| | ||||||||| |||||||    
T  7862049 ttatctttttctataaaaatagcttat 7862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 26779934 - 26779996
Alignment:
Q  237 cataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatag 299  Q
    |||||| | |||||||||||||||||||||||| |||| |||||| || ||||||||||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttatag 26779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 36872500 - 36872425
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagca 301  Q
    |||||| ||||||||||||||||||| ||||||| |||||||| ||  | ||||||| | ||||||||||||||||||    
T  36872500 ttatgaaaattttcataagctttttttaacttatattcataagctc--cgatatagcgagtaaaaacaacttatagca 36872425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 342 - 428
Target Start/End: Complemental strand, 38247409 - 38247324
Alignment:
Q  342 aaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||||||  | |||||||||||   | |||||||| ||||||||||||||||||  |||||| ||||||||||||||||||    
T  38247409 aaaacagcttatgtgagcttatacataagtgcatatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacag 38247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 5894284 - 5894353
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||| | |||||||||| |||  |||||||||||||   ||||||||||||||||||||||||    
T  5894284 cttatacataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaacag 5894353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 6557046 - 6556949
Alignment:
Q  224 ttatgacaattttcataagcttttttcaa-cttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||||||| |||||| ||| ||||||  | |||||| |||||||||| | |||||| || |||||||||||||||| ||||||||||| |||| ||||    
T  6557046 ttatgacagttttcaaaaggttttttttagcttattgtcataagttctttaatataacttataaaaacaacttataacatatacaaaaacaatttaac 6556949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 357
Target Start/End: Complemental strand, 26678968 - 26678844
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatc 331  Q
    |||||||||  |||||||||| | ||||||| ||||||  | || ||||| ||||| |||||||||||||| |||| || ||||||||| ||| ||||||    
T  26678968 attttcatacccttttttcaattcattttca-aagttctccgatgtagcttataaatacaacttatagcatttacataaacaatgtaactttattttatc 26678870  T
Q  332 ttatactataaaaacagcttatgcaa 357  Q
    || | || |||||| || ||||||||    
T  26678869 ttttgctgtaaaaatagtttatgcaa 26678844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 357 - 426
Target Start/End: Original strand, 27146367 - 27146436
Alignment:
Q  357 accttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaac 426  Q
    ||||||||||||||| |||||||||| | || ||| |||||||||  ||||||||||| |||||||||||    
T  27146367 accttatacataaacgcttatcatgatatgtacttatgctataagctgcaaataagctatttatccaaac 27146436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 38503462 - 38503535
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    ||||||| | |||||||| | |||||| |||||||||||||||||  ||| |||||||| ||||||||||||||    
T  38503462 tatgacattgttcataagttgttttcagcttattttcataagttctccaagatagctaacaaaaacaacttata 38503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 428
Target Start/End: Complemental strand, 37473477 - 37473269
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaa------acaacttatagcatatacaaaatcaatgt 317  Q
    |||||||| |||||||||||||||| || |||||||||||||||||  ||| ||| ||  |||||      | | | ||||||||||||| || | |  |    
T  37473477 ttatgacatttttcataagctttttccagcttattttcataagttctccaagataact--taaaatggcttatagcgtatagcatatacataaacgactt 37473380  T
Q  318 aacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtt 417  Q
    ||| ||  |||||| | | ||||||||| |||||||| || |||||||||||   ||| |||||| |||  ||||||| |||||  ||||||||| ||||    
T  37473379 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 37473280  T
Q  418 tatccaaacag 428  Q
    |||||||||||    
T  37473279 tatccaaacag 37473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 389 - 428
Target Start/End: Original strand, 34795565 - 34795604
Alignment:
Q  389 cttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  34795565 cttgtgctataagatgcaaataagctgtttatccaaacag 34795604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 37517162 - 37517205
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagt 267  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  37517162 ttatgacaattttcaaaagcttttttcaatttattttcataagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 30581992 - 30582074
Alignment:
Q  272 caatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatg 354  Q
    |||||||||| ||||||||| ||| |||||||||||||| |||  |||| ||| |||||||| | ||||||||| | ||||||    
T  30581992 caatatagcttataaaaacagcttgtagcatatacaaaaacaagttaactttattttatctttttctataaaaataccttatg 30582074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 40977396 - 40977486
Alignment:
Q  221 aatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaa-cttatagcatatacaaaa 310  Q
    |||||||||||||||||| ||||||||| || |||||||||||| ||||    |||| ||| ||||||  || ||||||||||||||||||    
T  40977396 aatttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaattaaccttatagcatatacaaaa 40977486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 2295170 - 2295125
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||    
T  2295170 ttatgacaattttcataagctctattcaacttattttcacaagttc 2295125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 7107516 - 7107604
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||| |||||||||||||||| || |||||| ||||||||||  ||| |||| ||||  |||||  ||||||||||||||||| ||||    
T  7107516 atgacatttttcataagcttttt-cagcttattgtcataagttctacaaaatagttaatggaaacagtttatagcatatacaaaaacaat 7107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 15477639 - 15477594
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||    
T  15477639 ttatgacaattttcaaaagcttttttcagcttatattcataagttc 15477594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 29904825 - 29904780
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  29904825 ttatggcaattttcaaaagcttttttcaccttattttcataagttc 29904780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 37842362 - 37842427
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagc 300  Q
    |||||||||  |||||| |||||||| |||||||| |||| |||||| || |||||||||||||||    
T  37842362 ttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagc 37842427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 47498964 - 47499033
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||| || | |||||||||| |||  |||||||||||||  ||||||||| |||||||||||||||    
T  47498964 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 47499033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 10809397 - 10809333
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||| |||||||||||||||||  |||||||||| || | ||||||||||||| || ||||||    
T  10809397 ttttcagcttattttcataagttctccaatatagctgatgagaacaacttatagcttacacaaaa 10809333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 33204326 - 33204402
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagctttttt 249  Q
    ||||||||||||||||| ||  |||| || ||||||||||| || ||||| |||||||| | |||||||||| ||||    
T  33204326 ttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatgacattgttcataagctgtttt 33204402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 310
Target Start/End: Original strand, 7137005 - 7137080
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||| | |||||| |||||||||||||||||  ||| |||||| || |||||| |||||||  |||||||||    
T  7137005 ttcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattatacaaaa 7137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 11893259 - 11893200
Alignment:
Q  237 cataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaactta 296  Q
    ||||||||||||||| || |||||||| ||||| |||| |||||| || |||||||||||    
T  11893259 cataagcttttttcagctaattttcattagttcttcaacatagcttatgaaaacaactta 11893200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 12287196 - 12287279
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    ||||||||||| | |||||| ||||||||  |||||||   || |||||| |  ||||||||||||||||||||||||| ||||    
T  12287196 attttcataagttgttttcagcttatttttgtaagttccataagatagcttaagaaaacaacttatagcatatacaaaaacaat 12287279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 14385725 - 14385808
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaactta 256  Q
    ||||||||||||||||| ||| |||| ||  |||||||| | |  ||||| |||||||||||| ||||| ||||| ||||||||    
T  14385725 ttatttgagcttatctactggcataagtttcgtgagactattttggagaacttatgacaatttgcataaacttttatcaactta 14385808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 39976123 - 39976198
Alignment:
Q  154 agggccagtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatga 229  Q
    |||||||||||||| ||| ||||||||| ||||||| ||  |||| || ||||| ||||| |||||||| ||||||    
T  39976123 agggccagtttggactgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatga 39976198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 45975753 - 45975678
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||| |||||| ||||||||||||| |||  ||| |||||| || |||||| ||| |||| |||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttatacaaaa 45975678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 7218081 - 7218151
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    |||| ||||| ||||||||||||||||||||||||  ||  |||| | || ||||||||||||||| ||||    
T  7218081 ttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttata 7218151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 15477585 - 15477535
Alignment:
Q  291 aacttatagcatatacaaaatcaatgtaacattactttatcttatactata 341  Q
    |||||||||||||||||||| |||| |||| ||| |||||||| |||||||    
T  15477585 aacttatagcatatacaaaaacaatttaactttattttatcttttactata 15477535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 17834199 - 17834157
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||    
T  17834199 cttatgcataaacacttatcatgataagtgcttgtgctataag 17834157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 429
Target Start/End: Original strand, 24562466 - 24562504
Alignment:
Q  391 tgtgctataagacgcaaataagctgtttatccaaacaga 429  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  24562466 tgtgctataagctgcaaataagctgtttatccaaacaga 24562504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 27146251 - 27146325
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    |||||||| | |||||||||| ||||||||||| |||| ||||||| |||| |||| | | ||||| ||||||||    
T  27146251 ttatgacattgttcataagctgttttcaacttactttcgtaagttcttcaagatagtttacaaaaataacttata 27146325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 30581737 - 30581683
Alignment:
Q  373 cttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    |||||||||| |||| ||||| |||||||  |||||||| |||||||||||||||    
T  30581737 cttatcatgaaaagtacttgttctataagctgcaaataaactgtttatccaaaca 30581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 428
Target Start/End: Original strand, 35058893 - 35058947
Alignment:
Q  375 tatcatgacaagtgcttgtgctataagacgcaaa-taagctgtttatccaaacag 428  Q
    |||||||| |||||||| |||||||||  ||||| ||||||||||||||||||||    
T  35058893 tatcatgataagtgcttatgctataagttgcaaaataagctgtttatccaaacag 35058947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 42575465 - 42575503
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttca 262  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  42575465 ttatgacagttttcataagcttttttcaacttcttttca 42575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 256 - 428
Target Start/End: Original strand, 44931960 - 44932132
Alignment:
Q  256 attttcataagttcgtcaatatagctaat-aaaaacaacttata--gcatatacaaaatcaatgtaacattactttatcttatactataaaaacagctta 352  Q
    |||||||||||||   |||||||| | || ||||||||||||||  |||||||||||| |||| |||| |   |||||||| | ||||||| | || |||    
T  44931960 attttcataagttttgcaatatagtttattaaaaacaacttatatagcatatacaaaaacaatttaactt---tttatcttttgctataaatatagttta 44932056  T
Q  353 tgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||| ||||||| |||   |||||||||| ||||| |  || |||| |  ||||| || ||||||||||||||||    
T  44932057 tgcaagcttatacctaagtgcttatcatgataagtgttaatgttatatgctgcaaacaaactgtttatccaaacag 44932132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 341521 - 341476
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    ||||||||||||||||||| |||||||||  | |||||||||||||    
T  341521 ttatgacaattttcataagtttttttcaatctgttttcataagttc 341476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 596247 - 596162
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaat-aaaaacaacttatagcatatacaaaa 310  Q
    ||||||||| ||  ||| |||||||||||||||||||| |||||  |  ||||| | || ||||||||||||| ||||||||||||    
T  596247 atgacaattatcgcaagtttttttcaacttattttcattagttctcccgtatagattataaaaaacaacttatggcatatacaaaa 596162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 1829075 - 1829144
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||||| | |||||||||| ||||| || ||||||| |   |||||||| |||||||||||||||    
T  1829075 cttatacataagcgcttatcatgataagtgtttatgctataggtttcaaataagttgtttatccaaacag 1829144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 3887628 - 3887673
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||| | |||||||||| |||| |||||||||||||||||||    
T  3887628 ttatgacattgttcataagctgtttttaacttattttcataagttc 3887673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 5709618 - 5709561
Alignment:
Q  249 tcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatac 306  Q
    |||||||||||||||||||||  |||||| |||  |||||||||| |||| |||||||    
T  5709618 tcaacttattttcataagttctccaatattgcttctaaaaacaacctataccatatac 5709561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 10799538 - 10799450
Alignment:
Q  221 aatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||||  ||| |||| || |||||| |||||||||||||||||  |||| ||||| || | ||||||||||||| || ||||||    
T  10799538 aatttatgacatgttt-ataatctgttttcagcttattttcataagttctccaatgtagctgatgagaacaacttatagcttacacaaaa 10799450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 22344027 - 22343958
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||| ||||| |||||||||||| ||| ||||||||  ||||  ||||||||| || ||||||||||||    
T  22344027 cttatgcataagctcttatcatgataagcgcttgtgcggtaagttgcaaataagttgattatccaaacag 22343958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 291
Target Start/End: Original strand, 34795451 - 34795488
Alignment:
Q  254 ttattttcataagttcgtcaatatagctaataaaaaca 291  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  34795451 ttattttcataagttctccaatatagctaataaaaaca 34795488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 273 - 378
Target Start/End: Original strand, 37517239 - 37517344
Alignment:
Q  273 aatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaact 372  Q
    ||||||||| || |||| ||||||||  |||||||||| |||| |||| ||| ||||| || |  |||| ||| | ||||||| | |||||||||||||     
T  37517239 aatatagcttattaaaataacttataatatatacaaaaacaatttaactttattttatattttggtatagaaataacttatgcgagcttatacataaacg 37517338  T
Q  373 cttatc 378  Q
    ||||||    
T  37517339 cttatc 37517344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 37769676 - 37769777
Alignment:
Q  244 ttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaa 343  Q
    |||||||| ||| ||||||||| |||  ||| | |||| ||||||||||||| ||||||| ||||||  ||| |||| ||| |||||| | | |||||||    
T  37769676 ttttttcagcttgttttcataaattctgcaagacagcttataaaaacaacttgtagcataaacaaaaataatttaactttattttatcatttgctataaa 37769775  T
Q  344 aa 345  Q
    ||    
T  37769776 aa 37769777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 423
Target Start/End: Complemental strand, 42391326 - 42391241
Alignment:
Q  338 tataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    |||||||| || ||| |||| ||||||||||| | |||||||||| |||   ||||||| |||| |||||||||  ||||||||||    
T  42391326 tataaaaatagtttaagcaagcttatacataagcacttatcatgataagcttttgtgctgtaagccgcaaataaattgtttatcca 42391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 3e-35; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 224 - 424
Target Start/End: Original strand, 25461643 - 25461842
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||| |||||||||||||||||  |||||||||||| ||||||||  ||||| |||| |||||||||||||||| ||||||| ||| |||| ||||  |    
T  25461643 ttatggcaattttcataagctttgatcaacttattttaataagttctccaatagagcttataaaaacaacttataacatatactaaaccaatttaacgat 25461742  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||||||||| ||||||||||| |||||| |||| | |||||||||| ||| || |||| ||||||   ||||||||||| |||||||    
T  25461743 a-tttatcttttgctataaaaatagcttatgcaagcttatatataaccacttatcatgagaagagcctgtgttataagctacaaataagctgcttatcca 25461841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 25461165 - 25460963
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||| |||||||||||| | ||||||| ||||||||||| |||||  ||||| |||| || ||||||||||||| ||||||||||| ||||  ||| ||    
T  25461165 ttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaatacaacttt 25461066  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||| ||||| |||||| |||| |||||| |||| |||||||||||| |||||||| |||||||||    | ||||||||||||||||    
T  25461065 a-tttatcttttgctagaaaaatagcttacgcaagcttatatataagctcttatcatgataagtgcttatgctataagctaaatataagctgtttatcca 25460967  T
Q  424 aaca 427  Q
    ||||    
T  25460966 aaca 25460963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 224 - 393
Target Start/End: Original strand, 16457975 - 16458143
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||||||||| ||||||  ||||||||| ||||||  |||| ||||| |||||||||||||||||||||||||||| |||| |||  ||    
T  16457975 ttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcataaaaacaacttatagcatatacaaaaacaatttaa-gtt 16458073  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgt 393  Q
    | |||||||| | ||||||||| ||||||||||| |||||| |||| | ||||||| || ||| ||||||    
T  16458074 attttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcaggataagagcttgt 16458143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 16937879 - 16937988
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||  |||||||||  |||||||||||||||||||||||||||| |||| |||| ||    
T  16937879 ttatgacaaatttcataagcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaacgtt 16937978  T
Q  324 actttatctt 333  Q
    | ||||||||    
T  16937979 attttatctt 16937988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 224 - 357
Target Start/End: Complemental strand, 29925915 - 29925782
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||||| |||||  | ||||||||||||||||||||||||||  |||||||||| ||  ||||||||||||||| ||||| || |||| ||||  |    
T  29925915 ttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttatagcacatacagaaacaatttaacgct 29925816  T
Q  324 actttatcttatactataaaaacagcttatgcaa 357  Q
    | |||||||| | ||||||||| |||||||||||    
T  29925815 attttatcttttgctataaaaatagcttatgcaa 29925782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 233 - 428
Target Start/End: Original strand, 13697764 - 13697959
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaa-tgtaacattactttatc 331  Q
    |||||||||| |||||||||||||||||||||| |||  ||| |||||| |||||| |||||||||  ||||| ||||  || | |||||||| ||||||    
T  13697764 ttttcataagtttttttcaacttattttcataacttctccaacatagcttataaaa-caacttataatatataaaaaaaaaaatttaacattattttatc 13697862  T
Q  332 ttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    || | ||||||||| |  ||||||||  |||| || || | |||||||||| || ||||| || ||||||  ||||||||| |||||||||||||||    
T  13697863 ttttgctataaaaataatttatgcaagtttatgcaaaatcacttatcatgataaatgcttatgttataagctgcaaataagttgtttatccaaacag 13697959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 225 - 427
Target Start/End: Original strand, 24030398 - 24030601
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatc-aatgtaacatt 323  Q
    ||||| ||||| || |||| ||||| | ||||||||||||||||    ||||||||| |||||||||||||||| ||||| |||||   ||| |||| ||    
T  24030398 tatgaaaatttccaaaagcgttttttagcttattttcataagttatctaatatagcttataaaaacaacttataacatatccaaaaaataatttaacttt 24030497  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | ||||||   | |||||  || ||||||||  | ||||||||    | |||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  24030498 attttatcggttgctatagcaatagcttatgtgagcttatacacgcgcacttatcatgataagtgcttgtgctataagctgcaaataagctgtttatcca 24030597  T
Q  424 aaca 427  Q
    ||||    
T  24030598 aaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 32009764 - 32009682
Alignment:
Q  227 tgacaattttcataa-gcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaa 308  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||  |||||||||| |||||||||| |||||||||||||||    
T  32009764 tgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagcttataaaaacaatttatagcatatacaa 32009682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 244 - 369
Target Start/End: Complemental strand, 36227848 - 36227724
Alignment:
Q  244 ttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaa 343  Q
    |||||| ||||||||| ||||||||| ||||||||||| |||||| |||||||||   |||||||||||||| ||||  || |||||||| | |||||||    
T  36227848 tttttttaacttattt-cataagttcttcaatatagcttataaaagcaacttatattgtatacaaaatcaatttaacgctattttatcttttgctataaa 36227750  T
Q  344 aacagcttatgcaaccttatacataa 369  Q
    || || ||| |||| |||||||||||    
T  36227749 aatagattaagcaagcttatacataa 36227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 37954760 - 37954689
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaactt 295  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||||  |||||||||| |||||||||||||    
T  37954760 ttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaacaactt 37954689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 286 - 427
Target Start/End: Complemental strand, 32372636 - 32372495
Alignment:
Q  286 aaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaa 385  Q
    |||||| |||||||||||||||||| ||||  ||| ||| ||||||   | |||||| || || ||||| ||   |||||||||   |||||||||| ||    
T  32372636 aaaacagcttatagcatatacaaaaacaattcaactttattttatcaggtgctataataatagtttatgtaagtgtatacataagggcttatcatgataa 32372537  T
Q  386 gtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||||||||||||||  ||||||||| ||||||||||||||    
T  32372536 gtgcttgtgctataagctgcaaataagttgtttatccaaaca 32372495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 277 - 428
Target Start/End: Complemental strand, 32941485 - 32941341
Alignment:
Q  277 tagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactctta 376  Q
    ||||| ||||||||||||||||||||| |||||| ||      ||||| |||||||| | || |||||  ||| ||||||| ||||||| ||| | ||||    
T  32941485 tagcttataaaaacaacttatagcatacacaaaaaca------cattattttatcttttgctctaaaactagcctatgcaagcttatacgtaagcgctta 32941392  T
Q  377 tcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||  |||||||| |||||||||  || ||||||||||||||||||||||    
T  32941391 tcatggtaagtgctt-tgctataagctgctaataagctgtttatccaaacag 32941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 12857334 - 12857420
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||||| |||||||||||| ||||||||  |||||||  |||||||||| |||||| || || ||||||| |||||||    
T  12857334 ttatgacaattttcacaagcttttttcagcttatttttgtaagttctccaatatagcttataaaatcagctaatagcatgtacaaaa 12857420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 25461853 - 25461955
Alignment:
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||||| | ||||||||| ||||||||||| |||||| |||| | |||||||||| ||| ||||||| ||||||   ||||||| ||| |||||||||    
T  25461853 tttatcttctgctataaaaatagcttatgcaagcttatatataaccacttatcatgataagcgcttgtgttataagctacaaataacctgcttatccaaa 25461952  T
Q  426 cag 428  Q
    |||    
T  25461953 cag 25461955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 12857701 - 12857765
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaa 288  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||  |||||||||| ||||||    
T  12857701 ttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 10640027 - 10639825
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||  ||| |||| | ||  |||||||| ||  ||||||||||| |||| |||  |     
T  10640027 ttatgacatttttcataagctttttctagcttattttcataagttctccaaaatagtttatgtaaacaactcatcacatatacaaaaacaatttaattta 10639928  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||||| ||| |||||||  |  |||||||||||   |||||| ||| ||   ||| |||| ||||  ||||||||||||||||||||    
T  10639927 attttatcttttgctatagaaatagcttatatagacttatacataagtgcttatcgtgataaccacttttgct-taagttgcaaataagctgtttatcca 10639829  T
Q  424 aaca 427  Q
    ||||    
T  10639828 aaca 10639825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 12425623 - 12425528
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactata 341  Q
    ||||||||||||||||||||||||  ||| ||||||  | |||||| |||||||| ||||| ||| |||| |||| ||| |||||||| |||||||    
T  12425623 ttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactata 12425528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 359 - 430
Target Start/End: Complemental strand, 28776924 - 28776853
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacagag 430  Q
    ||||||||||| | |||||||||| ||||||||  ||||||||  ||||||||| |||||||||||||||||    
T  28776924 cttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaacagag 28776853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 333
Target Start/End: Original strand, 34102224 - 34102419
Alignment:
Q  152 ttagggccagtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatga-------------caattttca 238  Q
    |||||||| ||||||||| | ||||||||||||| ||||||| |||| || ||||| ||||| || | ||||||||||             |||||||||    
T  34102224 ttagggcctgtttggaatcacttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagacaattttca 34102323  T
Q  239 taagcttttt-tcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    |||  ||||| |  |||| ||||||| |||||  ||| || ||| |||||||||||||||||||||||||||| |||  |||||||| ||||||||    
T  34102324 taacttttttattgacttgttttcatgagttctccaacatggcttataaaaacaacttatagcatatacaaaaacaaattaacattattttatctt 34102419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 3520355 - 3520302
Alignment:
Q  374 ttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||||||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  3520355 ttatcatgacaagtgcttgtgctataagctgaaaataagttgtttatccaaaca 3520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 329
Target Start/End: Complemental strand, 12554592 - 12554488
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||| ||||||||||||| ||||||   || ||||||| | |||  ||||||||| | |||||||||||||||||||||||||||| |||| |||| ||    
T  12554592 ttatgccaattttcataagattttttgg-ctaattttcaaaggtttttcaatataggttataaaaacaacttatagcatatacaaaaacaatttaacttt 12554494  T
Q  324 acttta 329  Q
     |||||    
T  12554493 ccttta 12554488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 42100449 - 42100400
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgagagaa 222  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  42100449 ttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaa 42100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 42500242 - 42500294
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagct 281  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  42500242 gacaattttcataagctttt-tcaacttattttcataagttctccaatatagct 42500294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 43300951 - 43300866
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||| |||  |||||| | ||||| |||||||||||||||||  ||| |||||| | ||||||||||||||| ||||||||||    
T  43300951 tatgacattttatataagcatgtttcagcttattttcataagttctccaagatagcttacaaaaacaacttataggatatacaaaa 43300866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 17652326 - 17652239
Alignment:
Q  233 ttttcataagcttttttcaa-cttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    ||||||||| |||||||||| ||||||| ||||||||  |||| |||||| || |||||||||||||| |||||||||| |||| ||||    
T  17652326 ttttcataaccttttttcaagcttattt-cataagttgttcaacatagcttatgaaaacaacttatagtatatacaaaagcaatttaac 17652239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 368
Target Start/End: Complemental strand, 41197716 - 41197577
Alignment:
Q  230 caattttcataagcttttttcaacttattttca-taagttcgtcaatatagctaataaaaacaacttatagcatat-acaaaatcaatgtaacattactt 327  Q
    |||||||||| |  |||||||| |||||||||| ||||||  ||||||||||| |||||||||||||||| | ||| | ||||  ||| |||||||  ||    
T  41197716 caattttcatcaatttttttca-cttattttcactaagtttctcaatatagcttataaaaacaacttataacgtataaaaaaaataatttaacattcttt 41197618  T
Q  328 tatcttatactataaaaacagcttatgcaaccttatacata 368  Q
    |||||||| ||||||||| |   ||||||| ||||||||||    
T  41197617 tatcttatgctataaaaataatctatgcaaacttatacata 41197577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 354
Target Start/End: Complemental strand, 35446130 - 35445999
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||  ||  |  ||| || | || |  ||||||| ||||||||| |||| |||| |    
T  35446130 tttatgacatttttcgtaagcttttttcagcttattttcataagttctccacaaatgcttatgagaagaggttatagcgtatacaaaaacaatttaactt 35446031  T
Q  323 tactttatcttatactataaaaacagcttatg 354  Q
    || |||||| | | ||||||||| ||||||||    
T  35446030 tattttatcatttgctataaaaatagcttatg 35445999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 40426687 - 40426632
Alignment:
Q  373 cttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||| ||||||||||||||||||  |||||| || |||||||||||||||    
T  40426687 cttatcatgataagtgcttgtgctataagctgcaaatgagttgtttatccaaacag 40426632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 3735154 - 3735228
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||    |||||  | ||||||||||||||||    
T  3735154 ttatgacaattttcaaaagcttttttcagcttatcttcataagttctcttatataatttataaaaacaacttata 3735228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 317 - 427
Target Start/End: Complemental strand, 12554444 - 12554334
Alignment:
Q  317 taacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgt 416  Q
    |||| ||| |||||| | ||||||||||| |||||||| || ||||| | ||||  |||||||| | ||| | ||||||| ||||  ||||||||| |||    
T  12554444 taactttattttatcatttactataaaaatagcttatggaagcttatgcgtaaatacttatcataataagcgtttgtgctttaagctgcaaataagttgt 12554345  T
Q  417 ttatccaaaca 427  Q
    |||||||||||    
T  12554344 ttatccaaaca 12554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 27298127 - 27298061
Alignment:
Q  244 ttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||||| | |||| ||||||  ||||||| || ||||||||||||||||||||||| ||||    
T  27298127 ttttttcaacttttcttcacaagttctccaatatatcttataaaaacaacttatagcatataaaaaa 27298061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 9202744 - 9202938
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| | |||||||||| ||| || ||||||||||||||||| |||| ||| || || |||||| ||||| || ||||  ||| |||| |||| ||    
T  9202744 ttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaacttt 9202843  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||| | ||| |||||||          | |||| | |||||||||| ||   |||||||||||||  ||||||||| ||||||||||    
T  9202844 attttatcttttgctacagaaatagcttat----------atataagcacttatcatgataaacacttgtgctataagctgcaaataagatgtttatcca 9202933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 26005336 - 26005437
Alignment:
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaa 425  Q
    |||||||| ||  ||| ||| ||||||||||| ||||||||||| |  ||||||| | ||||| ||||||||||||   | |||||| ||||||||||||    
T  26005336 tttatcttttaaaatagaaatagcttatgcaagcttatacataagcaattatcataataagtgtttgtgctataagcttctaataagttgtttatccaaa 26005435  T
Q  426 ca 427  Q
    ||    
T  26005436 ca 26005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 401
Target Start/End: Original strand, 34458539 - 34458684
Alignment:
Q  257 ttttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttt-atcttatactataaaaacagcttatgc 355  Q
    |||| |||||||| |||||||| ||  |||| |||||||| |||||||| ||||||||| |||||||  ||| ||||| | | ||||||| || || | |    
T  34458539 tttttataagttcttcaatataacttctaaacacaacttaaagcatatataaaatcaatttaacattcttttcatcttttgccataaaaatagtttttac 34458638  T
Q  356 aaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    || | ||||| ||||| |||||||||| ||  | ||||||||||||    
T  34458639 aagcctatacgtaaacacttatcatgaaaaacgtttgtgctataag 34458684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 6587114 - 6587194
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||||| ||| || |||||||||| ||||||  || ||||||| || ||||||||||||||| ||||| ||| ||||    
T  6587114 ttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaacaat 6587194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 347 - 431
Target Start/End: Original strand, 7319130 - 7319214
Alignment:
Q  347 agcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacagagt 431  Q
    |||||||| || ||||| |||||   |||||||||| ||| ||||||||||||||  | ||||||||||||||| ||||| ||||    
T  7319130 agcttatgtaagcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaaataagctgtttattcaaaccgagt 7319214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 233 - 345
Target Start/End: Original strand, 23994721 - 23994832
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatct 332  Q
    |||| |||| |||||||||||||||||| |||| |||  ||| ||||||  | |||| | |||||||||||||||||| |||  | |||||  |||||||    
T  23994721 ttttaataaacttttttcaacttatttttataatttctacaagatagcttgtgaaaatagcttatagcatatacaaaaacaa-cttacattgatttatct 23994819  T
Q  333 tatactataaaaa 345  Q
     ||||||||||||    
T  23994820 catactataaaaa 23994832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 228 - 356
Target Start/End: Complemental strand, 32022141 - 32022013
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactt 327  Q
    ||||||||||| |||||||||||| | |||||||  |||||  | ||||||| | |  |||| || |||||||||||||||||  ||  |||| ||| ||    
T  32022141 gacaattttcacaagcttttttcagcctattttctcaagttatttaatatagtttactaaaataatttatagcatatacaaaagtaaattaactttaatt 32022042  T
Q  328 tatcttatactataaaaacagcttatgca 356  Q
    |||||| | ||||||||  ||||||||||    
T  32022041 tatcttttgctataaaactagcttatgca 32022013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 39105538 - 39105442
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||||||| | |||||||||| |||| | |||||||||||||||||  ||| |||||| || ||||||  ||||||| ||||| ||| |||| ||||    
T  39105538 ttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaac 39105442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 3735600 - 3735691
Alignment:
Q  337 ctataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||| ||| |||||||| || ||||| ||||| | |||||||||| ||   |||||||||||||  ||||||| | |||||||||||||||    
T  3735600 ctatagaaatagcttatgtaagcttatccataagcgcttatcatgataatctcttgtgctataagctgcaaataggttgtttatccaaacag 3735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 15309000 - 15309070
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaat-atagctaataaaaacaacttatagcatata 305  Q
    ||||||| || |||||| |||||||||||||| || ||||| ||||||||| ||||||||||||||| ||||    
T  15309000 ttcataacctgttttcatcttattttcataagatc-tcaatgatagctaatgaaaacaacttatagcttata 15309070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 36797207 - 36797278
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacagag 430  Q
    ||||||||||| |  |||| |||| ||||||||||||||||||  |||||||| ||||||| ||||| ||||    
T  36797207 cttatacataagcagttataatgataagtgcttgtgctataagttgcaaataaactgtttacccaaatagag 36797278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 4014431 - 4014493
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttat 297  Q
    |||||||||| |||||| |||||||||||||||||  ||| |||||| || |||||| |||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 3932672 - 3932717
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||| |||||||||||||||||| || ||||||||| |||||||    
T  3932672 ttatgataattttcataagctttttacagcttattttcgtaagttc 3932717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 429
Target Start/End: Complemental strand, 32009618 - 32009577
Alignment:
Q  388 gcttgtgctataagacgcaaataagctgtttatccaaacaga 429  Q
    ||||||||||||||| ||||||||| |||||||| |||||||    
T  32009618 gcttgtgctataagatgcaaataagttgtttatcaaaacaga 32009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 36145251 - 36145202
Alignment:
Q  379 atgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||| ||||| |||||||||  ||||||||||||||||| |||||||    
T  36145251 atgacaattgcttatgctataagctgcaaataagctgtttatacaaacag 36145202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 429
Target Start/End: Original strand, 42500369 - 42500410
Alignment:
Q  388 gcttgtgctataagacgcaaataagctgtttatccaaacaga 429  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  42500369 gcttgtgctataagctggaaataagctgtttatccaaacaga 42500410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 2e-33; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 224 - 369
Target Start/End: Original strand, 16825534 - 16825678
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  || |||||||||||| | || |||||| |||| |||||||    
T  16825534 ttatgacaattttcataagctttt-tcaacttattttcataagttcggcaatatagcttgtagaaacaacttataacgtaaacaaaaacaatttaacatt 16825632  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    | |||||| | |||||||| || |||||||||||  ||||||||||    
T  16825633 attttatcctttactataagaatagcttatgcaaggttatacataa 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 229 - 429
Target Start/End: Complemental strand, 12976281 - 12976085
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattacttt 328  Q
    |||||||||| |||||||||||| ||||||| |||||||||   ||||||||| |||||||||| || ||||||||| ||||| ||| |||| ||| |||    
T  12976281 acaattttcaaaagcttttttcagcttattt-cataagttctctaatatagcttataaaaacaaattgtagcatataaaaaattaatttaactttatttt 12976183  T
Q  329 atcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    || || | ||||| ||| ||||||||  | ||||||||||| | ||||||||||  ||||| |||||||   |  |||||||||||||||||||||||||    
T  12976182 atattttgctatagaaatagcttatgtgagcttatacataagcgcttatcatgatgagtgcctgtgcta---gctgcaaataagctgtttatccaaacag 12976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 224 - 401
Target Start/End: Original strand, 10758253 - 10758429
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||  | ||||||||| ||||| |||||||||||||||||||||| |||| |||| ||    
T  10758253 ttatgacaattttcaaaagcttttttcagcttgttttcataagttgct-aatatagcttataaagacaacttatagcatatacaaaaacaatttaacttt 10758351  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    | |||||  | | ||||| ||| || ||| |  | ||||||||||| | |||||||||| ||||||| ||||||||||    
T  10758352 attttatgatttgctatagaaatagtttacgtgagcttatacataatcacttatcatgataagtgctagtgctataag 10758429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 224 - 428
Target Start/End: Complemental strand, 28763442 - 28763243
Alignment:
Q  224 ttatgacaattttcataagctttttt-caacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||  |||||||||| ||||||||||||| ||||||||  |||| |||| ||        
T  28763442 ttataacaattttcataagctttttttcaacttattt-cataagttcagcaatatagcttataaaaacaacttctagcatatgtaaaagcaattta---- 28763348  T
Q  323 tactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcc 422  Q
     || |||| || | ||||||||| ||| ||||| | | |||||||||| ||||||||||| ||||| || |||||||||   |||||||||||||||| |    
T  28763347 -acgttattttttgctataaaaatagcctatgccagcatatacataaattcttatcatgataagtgtttatgctataagttacaaataagctgtttatac 28763249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 239 - 427
Target Start/End: Complemental strand, 38750417 - 38750229
Alignment:
Q  239 taagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatact 338  Q
    ||||||||||| ||||| ||||| ||  ||| |  |||||||| |||||||||||||||| ||||||||||| || | |||||||| ||| |||    ||    
T  38750417 taagctttttttaacttcttttcgtatcttctttgatatagcttataaaaacaacttatatcatatacaaaaacattttaacattattttttctctgcct 38750318  T
Q  339 ataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||||| ||||||||||| ||||||||||| | |||||||||| |||||| ||| ||  |||   |||||||| ||||||||||||||    
T  38750317 ataaaaatagcttatgcaagcttatacataagcgcttatcatgataagtgcatgtacttcaagcttcaaataagttgtttatccaaaca 38750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 354
Target Start/End: Complemental strand, 26771339 - 26771209
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||   |||||| || ||||||| | |||||||||||||||||| |||| |||  ||    
T  26771339 ttatgacaattttcaaaagcctttttcaacttattttcataagttctctaatatatcttataaaaaaagcttatagcatatacaaaaacaatttaagttt 26771240  T
Q  324 actttatcttatactataaaaacagcttatg 354  Q
    | |||||  | ||||||| ||| ||||||||    
T  26771239 attttatgctttactatagaaatagcttatg 26771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 173 - 310
Target Start/End: Original strand, 9130251 - 9130388
Alignment:
Q  173 ttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaacttattttcataagttcgtc 272  Q
    ||||||||||||||||| ||| |||| || ||||||||| | || || |  |||||||||||||  |||| ||||||||||||||||||| |||||| |     
T  9130251 ttatttgagcttatctactggcataagttttgtgagactatttgggacaccttatgacaatttttgtaagtttttttcaacttattttcacaagttcttt 9130350  T
Q  273 aatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||  || ||||||||||||||||| ||||| ||||    
T  9130351 aatattacttataaaaacaacttatagaatatataaaa 9130388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 227 - 421
Target Start/End: Complemental strand, 15180611 - 15180418
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattact 326  Q
    |||||||||||  ||| |||||| |||||||||||| ||||||  |||||||||| ||| |||||||||||| ||| |||||||  ||| ||||  |||     
T  15180611 tgacaattttcc-aagtttttttaaacttattttcagaagttctccaatatagcttatagaaacaacttataacatttacaaaaataatttaacgatacg 15180513  T
Q  327 ttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatc 421  Q
    ||||||| | || || ||| | ||||||||| |||||| ||||  ||| ||||||| | | ||||||||||||||   |||||||| ||||||||    
T  15180512 ttatcttttgctgtacaaataacttatgcaaacttatagataagttctcatcatgatacgcgcttgtgctataagcttcaaataagttgtttatc 15180418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 35534609 - 35534809
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||| | |||||||||||  |||| ||||||||||||  ||||||| || || |||||||| ||||  | |||||||| |||| |||| ||    
T  35534609 ttatgacaattttaacaagcttttttcggcttactttcataagttctccaatataacttatgaaaacaacatata--acatacaaaaacaatttaacttt 35534706  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||||||||| | |||||| || ||||| ||| | | ||||| |||| ||  || |||||||||||  ||||||||||||||| ||||    
T  35534707 attttatctt-ttctataaaaatatcttatgtaagcttatgcat-agcgcttataatgataaacgcctgtgctataagctgcaaataagctgtttttcca 35534804  T
Q  424 aacag 428  Q
    |||||    
T  35534805 aacag 35534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 18133730 - 18133634
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||  |||||||| | |||||| || ||||||| |||||||||| |||| ||||    
T  18133730 ttataacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaccagcttataggatatacaaaagcaatttaac 18133634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 293 - 428
Target Start/End: Original strand, 1058139 - 1058274
Alignment:
Q  293 cttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttg 392  Q
    |||||||||||||||||| ||   |||| ||| |||||  | | ||||||||| |||||||| || ||||||||||| | ||||||||   ||| |||||    
T  1058139 cttatagcatatacaaaaacagattaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagcgcttatcatagtaagcgcttg 1058238  T
Q  393 tgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||||||  ||||||||||||||||| |||||||    
T  1058239 tgctataagctgcaaataagctgtttattcaaacag 1058274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 11861871 - 11861792
Alignment:
Q  231 aattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||| |||||||||| ||| |||||||||||||||   | ||||||| ||||||||||||||||||||||||||||    
T  11861871 aattttcaaaagctttttttaacgtattttcataagttctctattatagcttataaaaacaacttatagcatatacaaaa 11861792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 37945670 - 37945584
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaat 311  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||   |||||||||| ||||||||||| |||||||||||||||||    
T  37945670 ttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaac-tatagcatatacaaaat 37945584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 427
Target Start/End: Original strand, 14956396 - 14956494
Alignment:
Q  329 atcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaaca 427  Q
    ||||| ||| ||||||| ||||||||||| |||||||||||   |||||||||| ||| | ||||||||||||  ||||||||| ||||||||||||||    
T  14956396 atcttttacaataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcgattgtgctataagctgcaaataagttgtttatccaaaca 14956494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 35643983 - 35644039
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatag 279  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  35643983 tttatgacaattttcataagcttttttcaacttattttcataagctctccaatatag 35644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 320
Target Start/End: Complemental strand, 27028901 - 27028809
Alignment:
Q  228 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||| |||||||||||| |||||| |||||||||||||| ||  ||| |||||| || |||||| ||||||||||||||| || |||| ||||    
T  27028901 gacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaatttaac 27028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 29818936 - 29818996
Alignment:
Q  250 caacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||| ||||    
T  29818936 caacttattttcataagctcgccaatatggcttataaaaacaacttatagcatataaaaaa 29818996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 293 - 376
Target Start/End: Original strand, 12497296 - 12497379
Alignment:
Q  293 cttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactctta 376  Q
    |||||||||||||||||| |||  |||| ||| |||||||| | |||||||||  |||||||||| ||||||||||| ||||||    
T  12497296 cttatagcatatacaaaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataacctctta 12497379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 43045726 - 43045776
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttcgtcaatatag 279  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  43045726 acaattttaataagcttttttcaacttattttcataagttctccaatatag 43045776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 236 - 353
Target Start/End: Complemental strand, 10114551 - 10114435
Alignment:
Q  236 tcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttat 335  Q
    ||||| ||| |||||| |||||||||||| ||||  ||||||||||||| |||||| |||||||| ||||| ||| ||||  ||| ||| |||||||| |    
T  10114551 tcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaattcaac-ttattttatctttt 10114453  T
Q  336 actataaaaacagcttat 353  Q
     ||||| ||| |||||||    
T  10114452 gctatagaaatagcttat 10114435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 16736161 - 16736072
Alignment:
Q  221 aatttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||||||||||| || |||||||| |||||| |||||||||||| ||   |||||||| | ||||| |||||||||| ||| |||||||    
T  16736161 aatttatgacaatatttataagcttctttcaagttattttcataaattttccaatatagtttataaagacaacttataacatgtacaaaa 16736072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 333
Target Start/End: Complemental strand, 29205880 - 29205773
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatta 324  Q
    ||||||| ||||||||||||||||| ||| || |||||||| |||  ||| |||| | || |||| |||||||||||||||||||| |||| |||| | |    
T  29205880 tatgacatttttcataagctttttt-aacctactttcataaattctccaaaatagtttatgaaaataacttatagcatatacaaaaacaatttaacttca 29205782  T
Q  325 ctttatctt 333  Q
     ||||||||    
T  29205781 ttttatctt 29205773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 369
Target Start/End: Original strand, 25930552 - 25930695
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattac 325  Q
    |||||| ||||| ||||||||||||| |||| | ||| ||||||  ||| |||||| || ||||||| ||| ||||||||||||| || | |||  |||     
T  25930552 atgacacttttcgtaagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatacaaaaacattttaattttat 25930651  T
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
    || ||| | | ||||| ||| |||||||| || |||||||||||    
T  25930652 ttcatcctttcctatagaaatagcttatgtaagcttatacataa 25930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 40981055 - 40981000
Alignment:
Q  373 cttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||| || ||| ||||||||||||||  |||||||||||||||||||||||||    
T  40981055 cttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacag 40981000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 21653144 - 21653046
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    |||||||||| |||||| |||||||||||||| ||  ||| ||||||||| ||| ||| || |||| || || |||||||| |||| ||| ||||||||    
T  21653144 ttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaactttattttatctt 21653046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 426
Target Start/End: Original strand, 29168053 - 29168250
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||||||   ||| ||| ||||||| |||||||||  ||| |||||| |  |||||| ||||||||||||||||||      |||  ||    
T  29168053 ttatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagctcaggaaaacagcttatagcatatacaaaa-----ataatttt 29168147  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | |||||||| | ||||| ||| ||||||||  | ||||||||||| | ||| | |||| ||  ||||||||||||||  ||| |||| |||| ||||||    
T  29168148 attttatcttttgctatagaaatagcttatgtgagcttatacataagcacttttgatgataaacgcttgtgctataagctgcagataacctgtgtatcca 29168247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 309
Target Start/End: Original strand, 36963353 - 36963434
Alignment:
Q  227 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaa 309  Q
    |||||||||||| ||||||||| ||||||||||| || |||||   ||||||| | | ||||||||||||||||||| |||||    
T  36963353 tgacaattttcaaaagctttttacaacttatttt-attagttctctaatatagttcagaaaaacaacttatagcataaacaaa 36963434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 35749575 - 35749640
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    ||||||||| ||||||||||| ||||||||||||||| | || |||||| ||  ||||||||||||    
T  35749575 ttttcataaacttttttcaacatattttcataagttctttaagatagcttatggaaacaacttata 35749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 41596047 - 41595967
Alignment:
Q  232 attttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaact--tatagcatatacaaaa 310  Q
    ||||||||||||||||||||| |||||||  ||||||  |||||||| ||  ||||||||| |  ||||||||||||||||    
T  41596047 attttcataagcttttttcaatttatttttgtaagtttttcaatataacttgtaaaaacaaattatatagcatatacaaaa 41595967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 310
Target Start/End: Complemental strand, 42052193 - 42052044
Alignment:
Q  161 gtttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaatttatgacaattttcataagcttttttcaacttatttt 260  Q
    ||||||| ||| |||| | | |||||||| ||| |||| || |||  |||||| || ||||| | | ||||| | |||||||||||||| |||||||||     
T  42052193 gtttggattgacttatctaaacttatctactggcataagttttgtcggactgtttgggagaactcaagacaagtatcataagcttttttaaacttatttc 42052094  T
Q  261 cataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    ||||| || |  ||| ||||| ||||||| |||||| |||||||| ||||    
T  42052093 cataaatttgataatttagcttataaaaataacttaaagcatataaaaaa 42052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 6525892 - 6525753
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacat 322  Q
    ||||||||||||||||||| ||||   | |||| |||||||||||||   ||||||||| ||||||||||| ||| | || || ||||| ||| |||  |    
T  6525892 tttatgacaattttcataaactttcaactacttgttttcataagttctcaaatatagcttataaaaacaacgtatggtatttaaaaaat-aatttaatgt 6525794  T
Q  323 tactttatcttatactataaaaacagcttatgcaaccttat 363  Q
    || ||||  || | ||||||||| ||||||||||| |||||    
T  6525793 tattttagtttttgctataaaaatagcttatgcaagcttat 6525753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 10120830 - 10120734
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    |||||||| || ||||| ||| |||||| |||||||||||||||||  |||||||| ||||  ||||| |||||||  ||||| ||| |||| ||||    
T  10120830 ttatgacatttatcatatgctgttttcagcttattttcataagttctccaatatagttaatgtaaacagcttataggttataccaaaacaatttaac 10120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 11407349 - 11407389
Alignment:
Q  229 acaattttcataagcttttttcaacttattttcataagttc 269  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  11407349 acaattttcacaagcttttttcaacttatttttataagttc 11407389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 12496993 - 12497053
Alignment:
Q  162 tttggaatgatttatttgagcttatctattggaataaattctgtgagactgtgtgagagaa 222  Q
    |||||| ||||||||||||||||||||  ||| |||| || ||||||||||| ||||||||    
T  12496993 tttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaa 12497053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 38648423 - 38648339
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||| || |||||||||||||| | | || ||||||||||||  ||| |||||| || ||||||||| ||| |||||||||||    
T  38648423 atgacagttctcataagcttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaactcataacatatacaaaa 38648339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 30251459 - 30251534
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaa 308  Q
    |||||||||||||||| || |||||||||||||||    ||| |||||| || |||||| |||||| |||||||||    
T  30251459 ttttcataagctttttacagcttattttcataagtggtccaagatagcttatgaaaacagcttataacatatacaa 30251534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 32976032 - 32975957
Alignment:
Q  326 tttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    |||||||| | ||||||||| ||||||||||| |||||| |||| | |||||||| | || |||||||||| ||||    
T  32976032 tttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcataataactgcttgtgctctaag 32975957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 41475181 - 41475248
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaac 426  Q
    |||||||||||   |||||||||||||||| ||||  ||||||  ||||||||| |||||||||||||    
T  41475181 cttatacataagtgcttatcatgacaagtgtttgtcttataagttgcaaataagttgtttatccaaac 41475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 13822048 - 13822121
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttata 298  Q
    |||||||||| |||||| ||||||||||| ||||| |||||||||  ||||| ||| | | ||||||||||||||    
T  13822048 ttatgacaatattcatatgcttttttcaagttattatcataagtttttcaat-tagtttacaaaaacaacttata 13822121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 424
Target Start/End: Original strand, 9956949 - 9956998
Alignment:
Q  375 tatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaa 424  Q
    |||||||| ||||||||||||||||||   |||||||| |||||||||||    
T  9956949 tatcatgataagtgcttgtgctataagctacaaataagttgtttatccaa 9956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 30657798 - 30657847
Alignment:
Q  254 ttattttcataagttcgtcaatatagctaataaaaacaacttatagcata 303  Q
    ||||||||||||||||  |||||||||| ||||||||| |||||| ||||    
T  30657798 ttattttcataagttctccaatatagcttataaaaacatcttataacata 30657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 38602391 - 38602298
Alignment:
Q  240 aagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatctt 333  Q
    ||||| |||||  |||||||||| || |||  || ||||||| ||||||||| |||||||||||| ||||| |||| |||| | | ||||||||    
T  38602391 aagctgttttcggcttattttcacaaattctccagtatagcttataaaaacagcttatagcatatgcaaaagcaatttaacttcattttatctt 38602298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 7e-33; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 248 - 428
Target Start/End: Complemental strand, 6538562 - 6538387
Alignment:
Q  248 ttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaaca 347  Q
    ||||||||||||| ||||||||  |||||||||  ||||||||||||||||||||||||| || |||| ||||||||     |||| | ||| ||||  |    
T  6538562 ttcaacttattttaataagttctccaatatagcctataaaaacaacttatagcatatacataaacaatttaacatta-----tcttttgctaaaaaacta 6538468  T
Q  348 gcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
     ||||||||| ||||||||||| | |||||||| | ||||||||||||||||||  ||||||||||| |||||||||||||    
T  6538467 acttatgcaagcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaacag 6538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 224 - 411
Target Start/End: Complemental strand, 18076277 - 18076083
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgt-------caatatagctaataaaaacaacttatagcatatacaaaatcaatg 316  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||| |       |||||||||| |||||||||||||||||||  || |||| ||||     
T  18076277 ttatgacaattttcatgagctgttttcaacttatattcataagttcttagttcttcaatatagcttataaaaacaacttatagcaattagaaaaacaatt 18076178  T
Q  317 taacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataa 411  Q
    |||| ||| ||| |||| | ||||||||| | ||||||||| |||||||||||   ||||| |||| ||| ||||||||||||||  ||||||||    
T  18076177 taaccttattttctcttttgctataaaaataacttatgcaagcttatacataagtgcttattatgataagcgcttgtgctataagctgcaaataa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 6536683 - 6536598
Alignment:
Q  230 caattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||| ||||    
T  6536683 caattttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaat 6536598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 207 - 427
Target Start/End: Original strand, 12836150 - 12836371
Alignment:
Q  207 agactgtgtgagagaatttatgacaattttcataagctttttt-caacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatata 305  Q
    ||||||| | |||||| ||||||||||||||||||| |||||| |||||||||||| ||||||  | ||||||||| ||||| || ||||| | ||||||    
T  12836150 agactgtctcagagaacttatgacaattttcataaggttttttacaacttattttcgtaagttttttaatatagcttataaagaccacttacaacatata 12836249  T
Q  306 caaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgc 405  Q
     ||||  ||| |||||||| ||||| || | || |||||   |||||||||| ||||||||||| ||||||||| || ||| | ||||| ||||||   |    
T  12836250 gaaaaataatttaacattattttatattttgctttaaaagttgcttatgcaagcttatacataagctcttatcaagataagagtttgtgttataagcaac 12836349  T
Q  406 aaataagctgtttatccaaaca 427  Q
    ||| | ||| ||||||||||||    
T  12836350 aaacaggctctttatccaaaca 12836371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 276 - 428
Target Start/End: Complemental strand, 24626317 - 24626165
Alignment:
Q  276 atagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactctt 375  Q
    |||||| || |||||||||||||| |||||||||| |||| |||| ||  |||||| | | ||||| ||| |||||||| || ||||||||||| |  |     
T  24626317 atagcttatgaaaacaacttatagaatatacaaaaacaatttaactttgttttatcctttcctatagaaatagcttatgtaagcttatacataagcaatc 24626218  T
Q  376 atcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||| |||   ||||||||||||  | ||||||| |||||||||||||||    
T  24626217 atcatgataagcatttgtgctataagctgtaaataagttgtttatccaaacag 24626165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 400
Target Start/End: Original strand, 6909930 - 6910045
Alignment:
Q  286 aaaacaacttatagcatatacaaaatcaatgtaacattactttat-cttatactataaaaacagcttatgcaaccttatacataaactcttatcatgaca 384  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||| | ||| | ||||| ||| |||||||| ||  |||||||||| | |||||||||| |    
T  6909930 aaaacaacttatagcatatacaaaaacaatttaactttatttttttcttttcctatagaaatagcttatgtaagtttatacataagcacttatcatgata 6910029  T
Q  385 agtgcttgtgctataa 400  Q
    |||||||||| |||||    
T  6910030 agtgcttgtgatataa 6910045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 9763634 - 9763563
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaactt 295  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||  |||||||||| || ||||||||||    
T  9763634 ttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttatgaaaacaactt 9763563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 34430457 - 34430548
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||||| || |||||||||||||||| ||||||||||||| |||  ||| |||||| || |||||| |||||| ||||||||||| ||||    
T  34430457 ttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaacaat 34430548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 225 - 369
Target Start/End: Complemental strand, 8201306 - 8201162
Alignment:
Q  225 tatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatta 324  Q
    |||| ||||||||| || |||| || || ||||||||||||||||  ||| ||| || ||||||||||||||||| ||| |||||| |||| |||  |||    
T  8201306 tatggcaattttcaaaatctttattaaatttattttcataagttctccaacataacttataaaaacaacttataggatacacaaaaacaatttaatgtta 8201207  T
Q  325 ctttatcttatactataaaaacagcttatgcaaccttatacataa 369  Q
     ||||||||  || ||||||| | | ||||||| |||||| ||||    
T  8201206 atttatctttgacaataaaaataacatatgcaagcttatatataa 8201162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 30536475 - 30536383
Alignment:
Q  301 atatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgt 393  Q
    |||||||||| |||| |||||||| |||||| | | |||||| || ||||||||||| ||||||||||| || ||||||||| ||||| ||||    
T  30536475 atatacaaaaacaatttaacattattttatcatttgctataataatagcttatgcaaacttatacataagcttttatcatgataagtggttgt 30536383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 400
Target Start/End: Original strand, 6016380 - 6016547
Alignment:
Q  233 ttttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatct 332  Q
    |||||||||| ||||||||||||||||| ||| ||||  |||||||| | ||||||||||| | ||| ||||  |||| ||||  ||| ||| |||||||    
T  6016380 ttttcataagtttttttcaacttatttttatatgttctccaatatagtttataaaaacaacatgtagaatattaaaaaacaattgaactttattttatct 6016479  T
Q  333 tatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataa 400  Q
    | |  ||| |||| | |||||||||  ||||| |||| | |||||| ||| ||||| |||| ||||||    
T  6016480 tttgttatgaaaataacttatgcaagattatatataagcgcttatcgtgataagtgtttgttctataa 6016547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 14929785 - 14929718
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaac 290  Q
    ||||||||||||||||||||||||||| || ||||||||| ||| ||| || ||||||| ||||||||    
T  14929785 tttatgacaattttcataagcttttttaaagttattttcacaagctcgccattatagcttataaaaac 14929718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 427
Target Start/End: Complemental strand, 34430789 - 34430587
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||| || || | ||| ||||| |||  |   |||||||||||||  ||| |||| |     
T  34430789 ttatgacaattttcatatgctttttcaaacttattttcataagttcttcgatcttgcttataaagacatttcggagcatatacaaaa-gaatttaacgtc 34430691  T
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatcca 423  Q
    | | |||| | | | | ||| | |||||||| || ||||||||||| | | |||||||| |||  |||||||||||||  ||||||||| |||||||| |    
T  34430690 attatatcctttgcaaaaaatatagcttatggaagcttatacataagcgcctatcatgataagcacttgtgctataagctgcaaataagatgtttatcga 34430591  T
Q  424 aaca 427  Q
    ||||    
T  34430590 aaca 34430587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 333
Target Start/End: Complemental strand, 2735143 - 2735034
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacatt 323  Q
    |||||||| |||||||||||| |||||  ||||||||||||||||  |||| || ||| || |||||| |||||||  |||||||||  ||| |||| ||    
T  2735143 ttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattatacaaaaataatttaacttt 2735044  T
Q  324 actttatctt 333  Q
    | ||||||||    
T  2735043 attttatctt 2735034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 8844660 - 8844732
Alignment:
Q  238 ataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaa 310  Q
    |||||||||||| ||||||||||||||||||     ||||||||  |||||||||||||||||||||| ||||    
T  8844660 ataagcttttttaaacttattttcataagttttaacatatagcttttaaaaacaacttatagcatataaaaaa 8844732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 30536568 - 30536520
Alignment:
Q  240 aagcttttttcaacttattttcataagttcgtcaatatagctaataaaa 288  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||    
T  30536568 aagcttttttcaacttattttcataaattctccaatatagctaataaaa 30536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 6200602 - 6200488
Alignment:
Q  255 tattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaacagcttatg 354  Q
    ||||||||| |||||  |||||||  | |||||||||| |||||||||||||||||  |||  | ||||| |||| ||| ||||||||||  |||||||     
T  6200602 tattttcattagttctccaatatattttataaaaacaagttatagcatatacaaaaataattcatcattattttaccttttactataaaagtagcttata 6200503  T
Q  355 caaccttatacataa 369  Q
    ||| ||||| |||||    
T  6200502 caaacttatgcataa 6200488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 20368187 - 20368267
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    ||||||||||  |||||||||||||||||||||||  ||| | |||| || ||||||||||||| |  |||||||| ||||    
T  20368187 ttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataactcatacaaaaacaat 20368267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 35070728 - 35070804
Alignment:
Q  326 tttatcttatactataaaaacagcttatgcaaccttata-cataaactcttatcatgacaagtgcttgtgctataag 401  Q
    |||||||| | ||||||||| |||||||| || |||||| ||| |   |||||||||||||||||||||||||||||    
T  35070728 tttatctttttctataaaaatagcttatgtaagcttatagcattagtgcttatcatgacaagtgcttgtgctataag 35070804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 837234 - 837341
Alignment:
Q  246 ttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacattactttatcttatactataaaaa 345  Q
    |||||| |||||||||||||||||  ||| ||||||||| ||||| ||||||||| || || ||| |||| ||||  |  |||||||| |||  ||||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaactctgttttatcttttacagtaaaaa 837333  T
Q  346 cagcttat 353  Q
     |||||||    
T  837334 tagcttat 837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 264320 - 264251
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    |||||| |||| | |||||||||| |||  |||||||||||||  |||||| ||||||| ||||||||||    
T  264320 cttatatataagcacttatcatgataagcacttgtgctataagctgcaaattagctgttaatccaaacag 264251  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 415367 - 415282
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaac 320  Q
    ||||||| || |||||| |||  || |||||||||  || ||||||| |||||||||||||||||| ||||| ||| |||| ||||    
T  415367 ttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatttaac 415282  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 848063 - 848022
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataa 265  Q
    |||||||| ||||| ||||||||||||| |||||||||||||    
T  848063 ttatgacatttttcttaagcttttttcagcttattttcataa 848022  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 30926512 - 30926435
Alignment:
Q  324 actttatcttatactataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataag 401  Q
    |||||||||| ||||||| ||| |||||||| || ||||||| |||   |||||||||| |||  |||||||||||||    
T  30926512 actttatcttttactatagaaatagcttatgtaagcttatacttaattgcttatcatgataagcccttgtgctataag 30926435  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 31624153 - 31624088
Alignment:
Q  235 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagc 300  Q
    |||||||||| |||||||||||||||||||| |||  ||| |||||  || |||||| ||||||||    
T  31624153 ttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagc 31624088  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 35069501 - 35069432
Alignment:
Q  359 cttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||| ||||| | |||||||||| ||  ||||||||||||||  ||||||||| |||||||| ||||||    
T  35069501 cttatgcataagcacttatcatgataaacgcttgtgctataagctgcaaataagttgtttatcaaaacag 35069432  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 315
Target Start/End: Complemental strand, 35099108 - 35099020
Alignment:
Q  226 atgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 315  Q
    |||||| ||||| |||| ||||||||||||||||||| || | |   || |||||| || ||||||||||||| ||||||||||| ||||    
T  35099108 atgacatttttcgtaag-ttttttcaacttattttcaaaaatactctaagatagcttatgaaaacaacttataacatatacaaaaacaat 35099020  T

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Target: scaffold0050 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 223 - 294
Target Start/End: Complemental strand, 58817 - 58746
Alignment:
Q  223 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaact 294  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| || |||||||||    
T  58817 tttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagcttatgaaaacaact 58746  T

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Target: scaffold0221 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 22305 - 22220
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaa 309  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||   ||| |||||| || | |||| ||||||| |||||||||    
T  22305 ttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttatgataacagcttatagtatatacaaa 22220  T

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Target: scaffold0103 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 52051 - 51975
Alignment:
Q  224 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatag--ctaataaaaacaacttata 298  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| | |||||||   | ||||||||||||||||    
T  52051 ttatgataattttcaaaagcttttttcaacttattttcataagttctttaatatagtttttataaaaacaacttata 51975  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 158068 - 157977
Alignment:
Q  337 ctataaaaacagcttatgcaaccttatacataaactcttatcatgacaagtgcttgtgctataagacgcaaataagctgtttatccaaacag 428  Q
    ||||||||| |||||||| || || || ||||| |  ||||||| | ||||| ||||||||||||  |||||||||||||||||||||||||    
T  158068 ctataaaaatagcttatgtaagctaatgcataagcaattatcatcataagtgtttgtgctataagctgcaaataagctgtttatccaaacag 157977  T

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