View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3630_low_13 (Length: 271)

Name: NF3630_low_13
Description: NF3630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3630_low_13
NF3630_low_13
[»] chr5 (30 HSPs)
chr5 (1-151)||(4892324-4892473)
chr5 (1-150)||(33584124-33584272)
chr5 (1-153)||(25398360-25398511)
chr5 (1-147)||(12850923-12851069)
chr5 (5-151)||(3521801-3521945)
chr5 (4-149)||(3362903-3363048)
chr5 (1-150)||(6043307-6043454)
chr5 (1-150)||(8145497-8145643)
chr5 (7-151)||(37321587-37321730)
chr5 (9-151)||(14138798-14138938)
chr5 (1-150)||(2477758-2477906)
chr5 (4-150)||(38899520-38899666)
chr5 (1-129)||(11360947-11361074)
chr5 (50-151)||(12614531-12614633)
chr5 (60-150)||(22912852-22912942)
chr5 (4-106)||(4433847-4433947)
chr5 (60-151)||(17545476-17545567)
chr5 (1-119)||(31640767-31640883)
chr5 (9-150)||(27481952-27482095)
chr5 (74-138)||(8145387-8145452)
chr5 (74-138)||(12614721-12614786)
chr5 (74-138)||(22913042-22913107)
chr5 (79-138)||(10458409-10458469)
chr5 (57-113)||(13664736-13664792)
chr5 (74-138)||(2477648-2477713)
chr5 (74-138)||(6043499-6043564)
chr5 (74-138)||(11361119-11361184)
chr5 (6-35)||(17545594-17545623)
chr5 (74-119)||(17545673-17545718)
chr5 (74-119)||(31640928-31640973)
[»] chr3 (44 HSPs)
chr3 (4-153)||(33113918-33114067)
chr3 (1-152)||(3137207-3137357)
chr3 (4-153)||(22426137-22426284)
chr3 (3-150)||(30385525-30385670)
chr3 (5-150)||(19650695-19650838)
chr3 (4-152)||(3456189-3456336)
chr3 (9-152)||(34482681-34482823)
chr3 (3-150)||(37522177-37522323)
chr3 (5-150)||(3574321-3574465)
chr3 (1-149)||(8320378-8320527)
chr3 (50-152)||(37216846-37216948)
chr3 (5-150)||(3089543-3089689)
chr3 (50-152)||(6042047-6042149)
chr3 (1-152)||(48161027-48161178)
chr3 (1-150)||(2754839-2754989)
chr3 (50-148)||(33145882-33145980)
chr3 (6-154)||(36864823-36864969)
chr3 (50-150)||(47738281-47738382)
chr3 (50-150)||(26612916-26613017)
chr3 (60-152)||(40328011-40328104)
chr3 (50-138)||(33839705-33839794)
chr3 (60-152)||(8361832-8361924)
chr3 (60-150)||(9796824-9796914)
chr3 (50-153)||(42921295-42921399)
chr3 (60-151)||(41224414-41224505)
chr3 (50-141)||(46919064-46919156)
chr3 (51-150)||(24343720-24343820)
chr3 (11-135)||(41883031-41883156)
chr3 (4-106)||(42297989-42298088)
chr3 (1-39)||(30385133-30385171)
chr3 (11-87)||(11347400-11347476)
chr3 (74-138)||(2754729-2754794)
chr3 (74-138)||(9797017-9797082)
chr3 (74-138)||(47738117-47738182)
chr3 (3-39)||(40327949-40327985)
chr3 (9-39)||(41224363-41224393)
chr3 (1-39)||(42297476-42297514)
chr3 (1-39)||(47738227-47738265)
chr3 (74-138)||(3137402-3137467)
chr3 (74-138)||(3574515-3574580)
chr3 (6-39)||(8361950-8361983)
chr3 (74-119)||(8362033-8362078)
chr3 (1-30)||(34482824-34482853)
chr3 (74-138)||(33145725-33145789)
[»] chr8 (49 HSPs)
chr8 (1-150)||(17841645-17841793)
chr8 (1-151)||(26041907-26042056)
chr8 (1-151)||(40779923-40780072)
chr8 (1-153)||(1645756-1645908)
chr8 (1-150)||(6108028-6108176)
chr8 (4-151)||(37985850-37985995)
chr8 (1-151)||(15187683-15187831)
chr8 (1-151)||(32064867-32065017)
chr8 (1-150)||(3596836-3596984)
chr8 (1-150)||(25581034-25581182)
chr8 (1-148)||(20091598-20091744)
chr8 (50-150)||(10044518-10044618)
chr8 (50-149)||(14129029-14129128)
chr8 (50-148)||(24211169-24211267)
chr8 (1-150)||(42754837-42754985)
chr8 (5-153)||(34665508-34665654)
chr8 (1-148)||(38017056-38017201)
chr8 (56-151)||(1503637-1503732)
chr8 (1-138)||(35353163-35353299)
chr8 (4-150)||(30055641-30055786)
chr8 (7-139)||(39772608-39772739)
chr8 (1-125)||(8453956-8454078)
chr8 (62-153)||(31347568-31347659)
chr8 (51-153)||(37132472-37132575)
chr8 (50-138)||(32394027-32394114)
chr8 (60-154)||(7022159-7022253)
chr8 (58-147)||(3890412-3890502)
chr8 (58-119)||(41819594-41819655)
chr8 (70-151)||(30834849-30834931)
chr8 (60-152)||(7017651-7017743)
chr8 (1-39)||(24211458-24211496)
chr8 (10-150)||(24844655-24844793)
chr8 (6-39)||(7017770-7017803)
chr8 (6-39)||(7022105-7022138)
chr8 (74-138)||(27782105-27782170)
chr8 (74-138)||(32064757-32064822)
chr8 (74-138)||(34665394-34665459)
chr8 (74-138)||(42755030-42755095)
chr8 (88-138)||(1886621-1886672)
chr8 (1-39)||(41819683-41819721)
chr8 (74-138)||(17841838-17841903)
chr8 (74-138)||(20091789-20091854)
chr8 (74-111)||(25581227-25581264)
chr8 (9-105)||(27835293-27835388)
chr8 (10-39)||(30834960-30834989)
chr8 (74-119)||(31347770-31347815)
chr8 (74-138)||(40780117-40780182)
chr8 (74-138)||(30835035-30835099)
chr8 (83-138)||(38016983-38017039)
[»] chr4 (45 HSPs)
chr4 (3-152)||(46441968-46442116)
chr4 (1-150)||(36073472-36073619)
chr4 (1-153)||(47290188-47290339)
chr4 (4-152)||(53123156-53123303)
chr4 (1-148)||(9088992-9089138)
chr4 (1-151)||(10442581-10442732)
chr4 (1-152)||(49387680-49387831)
chr4 (1-151)||(44893007-44893156)
chr4 (1-153)||(22199383-22199532)
chr4 (1-150)||(44893548-44893696)
chr4 (1-151)||(7744906-7745055)
chr4 (1-152)||(31078612-31078762)
chr4 (4-152)||(36073072-36073223)
chr4 (4-152)||(2624962-2625109)
chr4 (4-152)||(4751571-4751719)
chr4 (1-148)||(24128361-24128507)
chr4 (1-151)||(50156373-50156521)
chr4 (50-151)||(21802114-21802215)
chr4 (1-140)||(23964269-23964408)
chr4 (50-150)||(33530479-33530579)
chr4 (50-148)||(17655600-17655699)
chr4 (1-119)||(30563331-30563448)
chr4 (53-152)||(11314044-11314144)
chr4 (50-153)||(37219801-37219905)
chr4 (60-155)||(24392854-24392949)
chr4 (52-150)||(42671840-42671939)
chr4 (50-151)||(37934735-37934837)
chr4 (84-150)||(25063369-25063436)
chr4 (74-138)||(33530676-33530741)
chr4 (4-141)||(44744559-44744690)
chr4 (74-138)||(10442777-10442842)
chr4 (74-138)||(31078807-31078872)
chr4 (58-150)||(36073256-36073349)
chr4 (74-138)||(49387876-49387941)
chr4 (74-138)||(7745100-7745165)
chr4 (74-138)||(21802310-21802375)
chr4 (74-138)||(22199273-22199338)
chr4 (74-138)||(24392679-24392744)
chr4 (6-39)||(24392794-24392827)
chr4 (74-138)||(36072959-36073024)
chr4 (74-138)||(46441856-46441921)
chr4 (74-138)||(47290078-47290143)
chr4 (110-150)||(53998979-53999020)
chr4 (1-37)||(33530596-33530631)
chr4 (5-37)||(36073650-36073682)
[»] chr2 (33 HSPs)
chr2 (1-150)||(33380329-33380477)
chr2 (1-150)||(35160879-35161029)
chr2 (1-150)||(9293370-9293519)
chr2 (1-150)||(10662009-10662158)
chr2 (1-153)||(13354969-13355121)
chr2 (4-150)||(23267857-23268002)
chr2 (1-150)||(7475303-7475451)
chr2 (4-142)||(3989201-3989338)
chr2 (8-147)||(31174633-31174770)
chr2 (1-119)||(21936204-21936321)
chr2 (60-151)||(43331092-43331183)
chr2 (50-153)||(22592880-22592986)
chr2 (8-150)||(9723534-9723677)
chr2 (50-119)||(16767288-16767357)
chr2 (60-148)||(21393483-21393570)
chr2 (60-111)||(34320991-34321042)
chr2 (74-138)||(14941354-14941419)
chr2 (60-129)||(37335824-37335894)
chr2 (74-138)||(9293564-9293629)
chr2 (1-106)||(14941203-14941310)
chr2 (6-39)||(21393593-21393626)
chr2 (74-138)||(27847644-27847709)
chr2 (74-138)||(31174822-31174887)
chr2 (75-120)||(37335744-37335789)
chr2 (6-39)||(43331039-43331072)
chr2 (4-39)||(16767377-16767412)
chr2 (1-40)||(27847754-27847793)
chr2 (3-153)||(40262528-40262677)
chr2 (108-150)||(39819275-39819317)
chr2 (74-138)||(10661899-10661964)
chr2 (74-138)||(23268050-23268115)
chr2 (74-138)||(35160769-35160834)
chr2 (74-138)||(43330924-43330989)
[»] chr6 (25 HSPs)
chr6 (1-152)||(33696818-33696969)
chr6 (1-150)||(17175816-17175964)
chr6 (1-148)||(6031537-6031684)
chr6 (3-150)||(18365369-18365514)
chr6 (3-150)||(18370633-18370778)
chr6 (1-152)||(28675270-28675420)
chr6 (1-150)||(33695121-33695270)
chr6 (7-152)||(32702333-32702477)
chr6 (4-153)||(17705261-17705405)
chr6 (1-152)||(23290874-23291027)
chr6 (5-150)||(2309218-2309362)
chr6 (1-119)||(18889470-18889586)
chr6 (5-106)||(6127402-6127503)
chr6 (60-148)||(11548386-11548474)
chr6 (50-152)||(29693615-29693718)
chr6 (84-149)||(34238883-34238948)
chr6 (1-82)||(9752109-9752188)
chr6 (4-40)||(25987055-25987091)
chr6 (1-39)||(29693560-29693598)
chr6 (74-138)||(33695315-33695380)
chr6 (74-138)||(33696708-33696773)
chr6 (72-150)||(582522-582602)
chr6 (74-138)||(6127287-6127352)
chr6 (74-119)||(11548576-11548621)
chr6 (74-138)||(23291072-23291137)
[»] chr1 (33 HSPs)
chr1 (1-151)||(19015526-19015675)
chr1 (1-149)||(40215110-40215257)
chr1 (4-152)||(36966501-36966648)
chr1 (1-153)||(41876234-41876385)
chr1 (1-153)||(51737627-51737778)
chr1 (1-150)||(25463798-25463946)
chr1 (1-150)||(6883609-6883757)
chr1 (5-153)||(20304922-20305070)
chr1 (1-150)||(37821629-37821777)
chr1 (4-152)||(44094823-44094969)
chr1 (4-150)||(25973534-25973677)
chr1 (50-152)||(18404618-18404720)
chr1 (5-150)||(9910086-9910232)
chr1 (1-150)||(3559739-3559887)
chr1 (60-153)||(33786423-33786516)
chr1 (60-150)||(32000061-32000151)
chr1 (74-150)||(19722894-19722970)
chr1 (60-148)||(40273888-40273976)
chr1 (53-141)||(44690825-44690914)
chr1 (74-147)||(33786623-33786696)
chr1 (3-152)||(27523048-27523196)
chr1 (50-153)||(10167569-10167673)
chr1 (78-149)||(52064373-52064445)
chr1 (74-138)||(16045786-16045851)
chr1 (74-138)||(40215000-40215065)
chr1 (74-142)||(40273710-40273779)
chr1 (6-39)||(40273829-40273862)
chr1 (7-39)||(32000172-32000204)
chr1 (4-39)||(44690934-44690969)
chr1 (58-113)||(52329453-52329508)
chr1 (74-138)||(18404454-18404519)
chr1 (74-138)||(25463688-25463753)
chr1 (74-138)||(44094710-44094775)
[»] scaffold0228 (6 HSPs)
scaffold0228 (4-153)||(26061-26209)
scaffold0228 (4-153)||(16109-16257)
scaffold0228 (4-83)||(8527-8605)
scaffold0228 (74-138)||(8414-8479)
scaffold0228 (74-138)||(15996-16061)
scaffold0228 (74-138)||(25948-26013)
[»] chr7 (30 HSPs)
chr7 (3-150)||(24395096-24395241)
chr7 (1-151)||(48880721-48880870)
chr7 (5-152)||(3962105-3962250)
chr7 (4-151)||(45637837-45637982)
chr7 (8-151)||(42611940-42612082)
chr7 (4-153)||(15329398-15329547)
chr7 (4-150)||(30848694-30848839)
chr7 (4-153)||(15577639-15577790)
chr7 (5-148)||(4974532-4974674)
chr7 (50-150)||(34483008-34483108)
chr7 (151-255)||(2544631-2544737)
chr7 (50-151)||(35445567-35445668)
chr7 (50-150)||(35876414-35876514)
chr7 (4-150)||(25167651-25167790)
chr7 (50-141)||(29737314-29737406)
chr7 (3-151)||(42696207-42696355)
chr7 (60-149)||(37476876-37476965)
chr7 (60-153)||(18037157-18037250)
chr7 (60-151)||(15238564-15238655)
chr7 (53-141)||(20009902-20009991)
chr7 (74-138)||(4974723-4974788)
chr7 (6-39)||(37476985-37477018)
chr7 (74-138)||(42611823-42611888)
chr7 (74-138)||(45637724-45637789)
chr7 (77-138)||(15577841-15577903)
chr7 (84-150)||(40880641-40880706)
chr7 (74-119)||(15238414-15238459)
chr7 (6-35)||(15238509-15238538)
chr7 (6-39)||(18037105-18037138)
chr7 (74-138)||(34482847-34482912)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-150)||(47972-48119)
scaffold0085 (74-137)||(47863-47927)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-150)||(41133-41280)
scaffold0096 (74-138)||(41023-41088)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-150)||(4518-4666)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-148)||(12964-13110)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-150)||(11743-11891)
[»] scaffold0041 (1 HSPs)
scaffold0041 (84-150)||(85577-85642)


Alignment Details
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4892324 - 4892473
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892324 agcctggccggaaatcatggggtggtgggtgttatgtatcttctttta-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 4892422  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  4892423 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33584272 - 33584124
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584272 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 33584174  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  33584173 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 25398360 - 25398511
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398360 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 25398458  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||  ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  25398459 tcattgttgaatttttcttataaaatcattcttgatatctagcattttccttt 25398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12850923 - 12851069
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12850923 agcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatg 12851022  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattt 147  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  12851023 tcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 3521945 - 3521801
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521945 tggccggaaatcatggggtggtgggtgttatgtatcttttttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 3521848  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    || | ||| ||||||||||||||||||||||||||||| ||||||||    
T  3521847 tcttaaatttttcttataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 3362903 - 3363048
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  3362903 ctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtca 3363002  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||| | ||| ||||||||||||||||||||||||||||| ||||||    
T  3363003 ttcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6043454 - 6043307
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6043454 agcctggccggaaatcatggggtgttgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 6043357  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  6043356 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8145497 - 8145643
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||| ||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145497 agcctggtcggaaatcatggg-tggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 8145593  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  8145594 tcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 37321730 - 37321587
Alignment:
Q  7 gccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 106  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37321730 gccggaaatcatggggtggtgggtgttatgtat-tttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattc 37321632  T
Q  107 atgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
     ||||| ||||||||||||||||||||||||||||| ||||||||    
T  37321631 ttgaatatttcttataaaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 14138798 - 14138938
Alignment:
Q  9 cggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcat 108  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  14138798 cggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattctt 14138895  T
Q  109 gaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  14138896 gaatctttcttataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2477758 - 2477906
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  2477758 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatg 2477856  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| |  |||||||||||||||||||||||||||||||| |||||||    
T  2477857 tcattcttagatctttcttataaaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 38899666 - 38899520
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||| |||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38899666 ctggccgaaaatcatggggtggtgggtgttatatatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtca 38899568  T
Q  104 ttcatgaa-tctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| |||| | ||| ||||||||||||||||||||||||| |||||||    
T  38899567 ttcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 11361074 - 11360947
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  11361074 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatg 11360976  T
Q  101 tcattcatgaatctttcttataaaatcat 129  Q
    |||||| ||||||||||||||||||||||    
T  11360975 tcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||||| |||||||||||| |||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  149 cct 151  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||| |||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 4433947 - 4433847
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||| |||||||||||||||||          ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4433947 ctggccggaaatcatgggatggtgggtgttatgtat--ttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtca 4433850  T
Q  104 ttc 106  Q
    |||    
T  4433849 ttc 4433847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||| | ||| ||| ||   |||||||||||||||||||| ||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 31640883 - 31640767
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||| ||||||||| |||    |||||||||  ||||||| |||||||    
T  31640883 agcctggccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattctgccatg 31640786  T
Q  101 tcattcatgaatctttctt 119  Q
    |||||| ||||||||||||    
T  31640785 tcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 27481952 - 27482095
Alignment:
Q  9 cggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaa-tctaaaggtgattattgtgccatgtcattca 107  Q
    |||||||||||||||||||||||||||||||          || |||| ||||||||| ||| | ||| |||||||||||||||| ||  |||||||||     
T  27481952 cggaaatcatggggtggtgggtgttatgtat-tttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattct 27482050  T
Q  108 tgaatctttctt-ataaaatcattc-ttgatatctagtattttcc 150  Q
    ||||||||| || |||||||||||| || ||||||| ||||||||    
T  27482051 tgaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| || |||||||||| |||||||||||| |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||||| | |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  79 taaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||||||||| ||||||||||||| ||||| |||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  57 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatc 113  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||| ||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| | ||||||||||| ||||  |||||| |||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 17545623 - 17545594
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttat 35  Q
    ||||||||||||||||||||||||||||||    
T  17545623 ggccggaaatcatggggtggtgggtgttat 17545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||| |||| ||||| ||||||||||||| ||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 33113918 - 33114067
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33113918 ctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtca 33114017  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  33114018 ttcttgaatctttcttataaaatcattcttgatatctagcattttccttt 33114067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 3137357 - 3137207
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137357 agcctggccggaaatcatggggtgatgggtgttatgtatcttttttgt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 3137259  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  3137258 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 3137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 22426284 - 22426137
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22426284 ctggccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtca 22426187  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  22426186 ttcttgaatctttcttataaaatcattcttgatatctagcattttccttt 22426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 30385525 - 30385670
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385525 cctggccggaaatcatggggtggtgggtgttatgtat--ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 30385622  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  30385623 attcttgaatctttcttataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 19650838 - 19650695
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19650838 tggccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcat 19650741  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    || || |||||||||||||||||||||||||||||||| |||||||    
T  19650740 tcttggatctttcttataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 3456189 - 3456336
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||| |||| |||||||    
T  3456189 ctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtca 3456287  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  3456288 ttcttgaatctttcttataaaatcattcttgatatctagcattttcctt 3456336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 34482823 - 34482681
Alignment:
Q  9 cggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcat 108  Q
    ||||||||||||| |||||||| |||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34482823 cggaaatcatgggatggtgggtattatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 34482725  T
Q  109 gaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  34482724 gaatttttcttataaaatcattcttgatatctagcattttcctt 34482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 37522177 - 37522323
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    ||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37522177 cctggccggaaattatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtc 37522275  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  37522276 attcttaaatttttcttataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 3574465 - 3574321
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  3574465 tggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcat 3574367  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    || || |||||||||||||||||||||||||||||||| |||||||    
T  3574366 tcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8320527 - 8320378
Alignment:
Q  1 agcctggccggaaatcatgggg-tggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccat 99  Q
    ||||||||| |||||||||||| | |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8320527 agcctggccagaaatcatgggggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccat 8320428  T
Q  100 gtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  8320427 gtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 37216948 - 37216846
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  150 ctt 152  Q
    |||    
T  37216848 ctt 37216846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 3089543 - 3089689
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||| |||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3089543 tggccggaaatcatggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 3089642  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| |  |||||||||||||||||||||||||||||||| |||||||    
T  3089643 ttcttagatctttcttataaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 6042047 - 6042149
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  150 ctt 152  Q
    |||    
T  6042147 ctt 6042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 48161027 - 48161178
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||| |||||||| ||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  48161027 agcctagccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatg 48161126  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    || ||| || || ||||||||||||||||||||||||||||| |||||||||    
T  48161127 tcgttcttggatatttcttataaaatcattcttgatatctagcattttcctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2754839 - 2754989
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccat 99  Q
    |||||| |||||||||||||||| |||||||||||||||           |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2754839 agcctgaccggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccat 2754938  T
Q  100 gtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||||||| | ||||||||||||||||| ||||||||||||||| |||||||    
T  2754939 gtcattcttaaatctttcttataaaatgattcttgatatctagcattttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 36864969 - 36864823
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 105  Q
    |||||||||||||||| |||||||||||||||||          ||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  36864969 ggccggaaatcatgggatggtgggtgttatgtat---tttttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcatt 36864873  T
Q  106 catgaatctttctt-ataaaatcattcttgatatctagtattttcctttc 154  Q
    | ||||||||| || ||||||||||||||||||||||| |||||||||||    
T  36864872 cttgaatcttttttgataaaatcattcttgatatctagcattttcctttc 36864823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||  |||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  149 cc 150  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||  |||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  149 cc 150  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 40328011 - 40328104
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttcctt 152  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcctt 40328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 8361924 - 8361832
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||   |||||||||||||||||||| |||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcctt 8361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||   |||||||||||||||||||| |||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 42921295 - 42921399
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||| | ||| |||||| |||||||||||||| |||||||| |||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T
Q  149 ccttt 153  Q
     ||||    
T  42921395 tcttt 42921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||| ||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 46919064 - 46919156
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatcta 141  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| ||||||||||||  ||||||||| || ||||||||||||||||||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatcta 46919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  51 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttc 149  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |  |||||||||| ||||||||| || ||||||||||||||||||||||  ||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  150 c 150  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 41883156 - 41883031
Alignment:
Q  11 gaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatga 110  Q
    |||||||||||||||||||||||||||||          || |||| || |||||| ||||||||||| |||| |||||||| | ||||||||||| |||    
T  41883156 gaaatcatggggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttga 41883057  T
Q  111 atctttctt-ataaaatcattcttga 135  Q
    ||||||||| ||||||||||| ||||    
T  41883056 atctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 42297989 - 42298088
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||| | ||||||||||          ||||||| |||||||||||||||||||||||| |||| |||||||| |||||||    
T  42297989 ctggccggaaatcatggggtggtagatgttatgtat---tttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtca 42298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30385133 - 30385171
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30385133 agcctggccggaaatcatggggtggtgggtgttatgtat 30385171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 11347400 - 11347476
Alignment:
Q  11 gaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga 87  Q
    |||||||||||||||||||||||||||||          |||||| |||||||||||||| ||||||||||||||||    
T  11347400 gaaatcatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    ||||||||||||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||||||| |||||| |||||| |||||| ||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 40327949 - 40327985
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40327949 cctggccggaaatcatagggtggtgggtgttatgtat 40327985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 41224363 - 41224393
Alignment:
Q  9 cggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||||||||||||||||||||||||||||    
T  41224363 cggaaatcatggggtggtgggtgttatgtat 41224393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42297476 - 42297514
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  42297476 agcctgaccggaaatcatggggtggtggatgttatgtat 42297514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47738227 - 47738265
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||| || |||||||||||||||||||||||||||||    
T  47738227 agcctgaccagaaatcatggggtggtgggtgttatgtat 47738265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| | |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 8361983 - 8361950
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||| ||||||    
T  8361983 ggccggaaatcatggggtggtgggtgtcatgtat 8361950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 34482853 - 34482824
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggt 30  Q
    ||||||||||||||||||||||||||||||    
T  34482853 agcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  ||| | |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17841793 - 17841645
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841793 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 17841695  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  17841694 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26042056 - 26041907
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||| |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26042056 agcctgaccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 26041958  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  26041957 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40780072 - 40779923
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40780072 agcctggccggaaatcatggggtggtggatgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 40779974  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  40779973 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 1645908 - 1645756
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||| |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645908 agcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 1645809  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||| ||  ||||||||||||||||||||||||||||||| ||||||||||    
T  1645808 tcattcttggttctttcttataaaatcattcttgatatctagcattttccttt 1645756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6108176 - 6108028
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6108176 agcctggccggaaatcatggggtggtgggtgttatgtatcttcttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatg 6108078  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  6108077 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 37985995 - 37985850
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37985995 ctggccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtca 37985898  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  37985897 ttcttgaatctttcttataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15187683 - 15187831
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15187683 agcctggccggaaatcatggagtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatg 15187780  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||    
T  15187781 tcattcttggatctttcttataaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 32064867 - 32065017
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||| || |||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32064867 agcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatg 32064966  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| | ||| ||||||||||||||||||||||||||||| ||||||||    
T  32064967 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 3596984 - 3596836
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||| |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3596984 agcctgaccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccata 3596886  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  3596885 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25581182 - 25581034
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||| |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  25581182 agcctgaccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatg 25581084  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  25581083 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20091744 - 20091598
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||| |||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  20091744 agcctagccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatg 20091646  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  20091645 tcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  150 c 150  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 42754985 - 42754837
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| |||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42754985 agcctggccgaaaatcatgggatggtgggtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatg 42754887  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  42754886 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 34665508 - 34665654
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    |||||| ||||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  34665508 tggccgaaaatcatggagtggtgggtgttatgtat--ttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcat 34665605  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    || ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  34665606 tcttgaatctttcttataaaatcattcttgatatctagcatttttcttt 34665654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38017056 - 38017201
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgccat 99  Q
    |||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||| | |||||||| |||    
T  38017056 agcctggccggaaatcatggggtggtgggtgttatgtattttttttt---tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcat 38017152  T
Q  100 gtcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  38017153 gtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  56 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 35353163 - 35353299
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||| ||||||||||||||||||||         ||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  35353163 agcctggccggaaatcatgaggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatg 35353261  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatat 138  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  35353262 tcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 30055641 - 30055786
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||| ||||||||||          ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||    
T  30055641 ctggccggaaatcatggggtggtggatgttatgtat-tttttttttatgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtca 30055739  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| |||||||||||||||||||||||||| |||||||| |||||||    
T  30055740 ttcttgaatctttcttataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 39772739 - 39772608
Alignment:
Q  7 gccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 106  Q
    ||||||||||||||| |||||||||||||||||          |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  39772739 gccggaaatcatgggatggtgggtgttatgtat-tttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattc 39772641  T
Q  107 atgaatctttcttataaaatcattcttgatatc 139  Q
     || |||||||||||||||||||||||||||||    
T  39772640 ttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 8453956 - 8454078
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||| |||| |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8453956 agcctggccggaaattatggtgtggtgggtgttatgtatcttttttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 8454053  T
Q  101 tcattcatgaatctttcttataaaa 125  Q
    |||||| |||||  |||||||||||    
T  8454054 tcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 31347659 - 31347568
Alignment:
Q  62 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||| ||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccttt 31347568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 37132575 - 37132472
Alignment:
Q  51 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttc 149  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcattttt 37132476  T
Q  150 cttt 153  Q
    ||||    
T  37132475 cttt 37132472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatat 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||| |||||||||||||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 7022159 - 7022253
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcctttc 154  Q
    |||||||||||||||||||||| || |||||||||| | |||||||| ||||||||||||   |||||||| ||||||||||| |||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcctttc 7022253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  58 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattt 147  Q
    ||||||||| ||| | |||||||| |||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  58 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 30834931 - 30834849
Alignment:
Q  70 actgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttcct 151  Q
    |||||||||||| |||| ||||| || |||||||||| | |||||||||| ||||||||||||||||||||||  ||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 7017743 - 7017651
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||| | ||| ||||||   |||||||||||||||||||| |||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcctt 7017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24211496 - 24211458
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24211496 agcctggccggaaatcatggggtggtgggtgttatgtat 24211458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 24844793 - 24844655
Alignment:
Q  10 ggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatg 109  Q
    ||||||||| ||||||||||||||||||||          ||||||| ||||||| | ||| | ||||||||  ||||||||| ||||||| ||||| |     
T  24844793 ggaaatcatagggtggtgggtgttatgtat---tttttttatgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattctta 24844697  T
Q  110 aatctttctt-ataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||| ||||||||||| ||||||||||  |||||||    
T  24844696 aatctttcttgataaaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 7017803 - 7017770
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||||||    
T  7017803 ggccggaaatcatggggtggtgggtgttatgtat 7017770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 7022105 - 7022138
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||||||    
T  7022105 ggccggaaatcatggggtggtgggtgttatgtat 7022138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||| |||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  88 ttattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    ||||| ||||| ||||||| |||||||||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41819721 - 41819683
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  41819721 agcccggccggaaatcatggggtggtgtgtgttatgtat 41819683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| | |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaa 111  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 27835388 - 27835293
Alignment:
Q  9 cggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 105  Q
    ||||||||||||| |||||||||||||||||          || |||| ||||||||||||| |||||||||| | ||||||||||| ||| |||||    
T  27835388 cggaaatcatgggatggtgggtgttatgtat-ttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatt 27835293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 39
Target Start/End: Complemental strand, 30834989 - 30834960
Alignment:
Q  10 ggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||    
T  30834989 ggaaatcatggggtggtgggtgttatgtat 30834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| | |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatat 138  Q
    ||||| || |||||||||| ||||||||||||| ||||| |||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  83 ggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 46441968 - 46442116
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    ||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46441968 cctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 46442066  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  46442067 attcttgaatttttcttataaaatcattcttgatatctagcattttcctt 46442116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 36073472 - 36073619
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||| |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073472 agcctgaccggaaatcatggggtggtgggtgttatgtatcttttttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 36073569  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  36073570 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 47290188 - 47290339
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  47290188 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatg 47290286  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  47290287 tcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 47290339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 53123156 - 53123303
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53123156 ctggccggaaatcatggggtggtgggtgttatgtatcttttttgt-atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtca 53123254  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    ||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  53123255 ttcttgaatttttcttataaaatcattcttgatatctagcattttcctt 53123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9088992 - 9089138
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9088992 agcctggccggaaatcatggggtggtgggtgttatgtatcttttttgt-atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatg 9089090  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  9089091 tcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10442732 - 10442581
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgccat 99  Q
    ||||||||||||||||||||||||||||||||||||| |           ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10442732 agcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccat 10442633  T
Q  100 gtcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  10442632 gtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 49387831 - 49387680
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||| |||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387831 agcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 49387732  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  49387731 tcattcttgaatttttcttataaaatcatccttgatatctaacattttcctt 49387680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 44893156 - 44893007
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| |||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893156 agcctggccgaaaatcatgggatggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 44893058  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| | ||| ||||||||||||||||||||||||||||| ||||||||    
T  44893057 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 22199383 - 22199532
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||| ||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22199383 agcctggccagaaatcatggg-tggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 22199479  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  22199480 tcattcttggatctttcttataaaatcattcttgatatctagcattttccttt 22199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 44893548 - 44893696
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| |||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893548 agcctggccgaaaatcatgggatggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 44893646  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  44893647 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7745055 - 7744906
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          |||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  7745055 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatg 7744957  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  7744956 tcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 31078762 - 31078612
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||         ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  31078762 agcctggccggaaatcatggggtgatgggtgttatgtatctttttttt-atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatg 31078664  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||| ||||| ||| ||||||||||||||||||||||||| |||||||||    
T  31078663 tcattcttgaattttttttataaaatcattcttgatatctagcattttcctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 36073072 - 36073223
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36073072 ctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatg 36073171  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||| ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  36073172 tcattcttgaatttttcttataaaatcatttttgatatctagcattttcctt 36073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 2624962 - 2625109
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2624962 ctggccggaaatcatggagtggtgggtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtca 2625060  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    ||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  2625061 tttttgaatctttcttataaaatcattcttgatatctaacattttcctt 2625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 4751571 - 4751719
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4751571 ctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtca 4751670  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    ||| | ||| ||||||||||||| ||||||||||||||| |||||||||    
T  4751671 ttcttaaatttttcttataaaattattcttgatatctagcattttcctt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 24128361 - 24128507
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  24128361 agcctggccggaaatcatggggtggtggatgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatg 24128459  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||    
T  24128460 tcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 50156521 - 50156373
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| |||||||||| || ||||    
T  50156521 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatg 50156424  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||| ||||||||||||||||||||||||||||  ||||||||    
T  50156423 tcattcttgaatttttcttataaaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 21802215 - 21802114
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  150 ct 151  Q
    ||    
T  21802115 ct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23964408 - 23964269
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||| |||||||||||| |||||||||||||||||||          ||||||||||||||||||||| |||||||||||| |||||||| |||||||    
T  23964408 agcctgaccggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattattatgccatg 23964309  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatct 140  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  23964308 tcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  150 c 150  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| |||||||||||||||||||||||||||| |||||| || |||||||||| | |||||||||| |||||||||||||| |||||||| |||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30563331 - 30563448
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||| ||||||||| ||||||||||||||  |||||||||||| ||||    
T  30563331 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatg 30563429  T
Q  101 tcattcatgaatctttctt 119  Q
    |||||| ||||||||||||    
T  30563430 tcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 11314144 - 11314044
Alignment:
Q  53 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttcct 151  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||| ||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  152 t 152  Q
    |    
T  11314044 t 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 37219801 - 37219905
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||  |||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  149 ccttt 153  Q
    |||||    
T  37219901 ccttt 37219905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 24392854 - 24392949
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcctttct 155  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||| | ||| ||||||   |||||||||||||||||||| ||||| ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttttctttct 24392949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  52 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttcc 150  Q
    ||||| |||| |||||||||| ||||||||   |||||||| || |||||||||| |||||||||||| ||||||||||||||||||||||  |||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 37934837 - 37934735
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||| ||| |||||  |||||||||||| ||||||||| || | |||||||  |||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  149 cct 151  Q
    |||    
T  37934737 cct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  84 gtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttcc 150  Q
    ||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||||| |||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 44744559 - 44744690
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||| ||||||||||||||||||||          ||   || ||||||||| |||||||||||||| | | ||||||| | |||||||    
T  44744559 ctggccggaaatcatagggtggtgggtgttatgtatttttttttgtat---aggttaataaataagactgaaatctaaggataattattgagtcatgtca 44744655  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatcta 141  Q
    ||| |||||||   | ||||||||||| ||||||||||    
T  44744656 ttcttgaatct---tgataaaatcatttttgatatcta 44744690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  58 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttcc 150  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||| | |||||||||| ||||||||||| ||  ||||||| |||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| | |||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||| ||| |||||||||| ||||||||||||| ||||| |||||| | |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 24392794 - 24392827
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  24392794 ggccggaaatcatggggtgatgggtgttatgtat 24392827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||| ||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| | |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 53999020 - 53998979
Alignment:
Q  110 aatctttctt-ataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttcc 53998979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33530631 - 33530596
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgt 37  Q
    |||||||||||||||||| ||||||||||||||||||    
T  33530631 agcctggccggaaatcat-gggtggtgggtgttatgt 33530596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 36073682 - 36073650
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgt 37  Q
    ||||||||||||||||||||||| |||||||||    
T  36073682 tggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33380329 - 33380477
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380329 agcctggccggaaatcatggggtggtgggtgttatgtatcttttttta-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 33380427  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  33380428 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35160879 - 35161029
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccat 99  Q
    ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160879 agcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccat 35160978  T
Q  100 gtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  35160979 gtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 9293519 - 9293370
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  9293519 agcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatg 9293420  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9293419 tcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10662009 - 10662158
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10662009 agcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatg 10662108  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  10662109 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 13354969 - 13355121
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13354969 agcctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatg 13355068  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  13355069 tcattcttggatctttcttataaaatcattcttgatatctagcattttccttt 13355121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 23268002 - 23267857
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23268002 ctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 23267904  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  23267903 ttcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7475451 - 7475303
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||| || |||     
T  7475451 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcata 7475353  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  7475352 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 3989201 - 3989338
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  3989201 ctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtca 3989299  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctag 142  Q
    ||| || ||||||||||||||||||||||||||||||||    
T  3989300 ttcttggatctttcttataaaatcattcttgatatctag 3989338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 31174770 - 31174633
Alignment:
Q  8 ccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattca 107  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||     
T  31174770 ccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattct 31174673  T
Q  108 tgaatctttcttataaaatcattcttgatatctagtattt 147  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  31174672 tgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 21936204 - 21936321
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21936204 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatg 21936302  T
Q  101 tcattcatgaatctttctt 119  Q
    |||||| || ||| |||||    
T  21936303 tcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||   |||||||||||||||||||| ||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 22592880 - 22592986
Alignment:
Q  50 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatt 146  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  147 ttccttt 153  Q
    |||||||    
T  22592980 ttccttt 22592986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 9723534 - 9723677
Alignment:
Q  8 ccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattca 107  Q
    ||||||||||||||||||||||||||||||||          ||||||  | ||||||| ||||||||||||||||||||||||| || ||||||||||     
T  9723534 ccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattct 9723633  T
Q  108 tgaatctttctt-ataaaatcattcttgatatctagtattttcc 150  Q
    | ||| |||||| || |||||||||||||||||||  |||||||    
T  9723634 taaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||| ||||||   |||||||||||||||||||| |||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaa 111  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcat 129  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||  | |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14941310 - 14941203
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgcca 98  Q
    ||||||||| ||||||||| |||||||||||||||||||            ||||||| ||||||||| ||| |||||||||| | ||||||||||| ||    
T  14941310 agcctggccagaaatcatgaggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattattgtgtca 14941211  T
Q  99 tgtcattc 106  Q
    ||||||||    
T  14941210 tgtcattc 14941203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 21393626 - 21393593
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||||||    
T  21393626 ggccggaaatcatggggtggtgggtgttatgtat 21393593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| || |||||||||| |||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  75 aatctaaaggtgattattgtgccatgtcattcatgaatctttctta 120  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 43331039 - 43331072
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||||||    
T  43331039 ggccggaaatcatggggtggtgggtgttatgtat 43331072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 16767412 - 16767377
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16767412 ctggccggaaatcatagggtggtgggtgttatgtat 16767377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27847754 - 27847793
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatc 40  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  27847754 agcctgaccagaaatcatggggtggtgggtgttatgtatc 27847793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 40262677 - 40262528
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    |||| |||||||| |||||||||||||||||||||||          ||||||  |||| |||| | ||||||||||||  || |||||| | |||||||    
T  40262677 cctgaccggaaattatggggtggtgggtgttatgtat-ttattttttatgaaacgttaacaaataaaactgaaatctaagagttattattctaccatgtc 40262579  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||| ||||||  || |  |||  |||||||||||||||| ||||||||||    
T  40262578 attcttgaatccatcgtgaaaatccattcttgatatctagcattttccttt 40262528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 39819275 - 39819317
Alignment:
Q  108 tgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||||| ||||||||||||||||||||||||||||  |||||||    
T  39819275 tgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| | |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||| || | |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 33696818 - 33696969
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696818 agcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 33696917  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||    
T  33696918 tcattcttaaatctttcttataaaatcattcttgatatctagcattttcctt 33696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17175964 - 17175816
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17175964 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatg 17175866  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  17175865 tcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 6031684 - 6031537
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6031684 agcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 6031585  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||| | ||||||| |||||||||||||||||||||| ||||||||    
T  6031584 tcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 18365514 - 18365369
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    ||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18365514 cctggccggaaatcatggggtagtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtc 18365417  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||| || |||||||||||||||||||||||||||||||| |||||||    
T  18365416 attcttggatctttcttataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 18370778 - 18370633
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    ||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18370778 cctggccggaaatcatggggtagtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtc 18370681  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||| || |||||||||||||||||||||||||||||||| |||||||    
T  18370680 attcttggatctttcttataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 28675270 - 28675420
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  28675270 agcctggccggaaatcatggggtggtgggggttatgtat-tttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatg 28675368  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  28675369 tcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33695270 - 33695121
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||| |||     
T  33695270 agcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacata 33695171  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  33695170 tcattcttaaatatttcttataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 32702333 - 32702477
Alignment:
Q  7 gccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattc 106  Q
    |||||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  32702333 gccggaaatcatggggtggtgggtcttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattc 32702431  T
Q  107 atgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
     ||||| ||||||||||||||||||||||||||||| |||||||||    
T  32702432 ttgaatttttcttataaaatcattcttgatatctagcattttcctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 17705405 - 17705261
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||| ||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  17705405 ctggccggaaatcatgggatggtgggtgttatgta----attttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtca 17705311  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17705310 ttcttgaatctttcttataaaatcattcttgatatctagcattttccttt 17705261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 23291027 - 23290874
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgcca 98  Q
    ||||||||| |||||||||||||| ||||||||||||||            |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23291027 agcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgcca 23290928  T
Q  99 tgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    | |||||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  23290927 tatcattcttgaatctttcttataaaatcatttttgatatctagcattttcctt 23290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 2309362 - 2309218
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    ||||||||||||||||||| |||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  2309362 tggccggaaatcatggggttgtgggtgttatgtat-tttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcat 2309264  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    || ||||||||||||||||||||||  ||||||||||| |||||||    
T  2309263 tcttgaatctttcttataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 18889586 - 18889470
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||| |||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18889586 agccttgccggaaatcatggggtggtgggttttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 18889489  T
Q  101 tcattcatgaatctttctt 119  Q
    |||||| |||||| |||||    
T  18889488 tcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 6127402 - 6127503
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    ||||| |||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6127402 tggccagaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcat 6127501  T
Q  105 tc 106  Q
    ||    
T  6127502 tc 6127503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||   |||||||||||||||||||| |||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 29693615 - 29693718
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtatttt 148  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  149 cctt 152  Q
    ||||    
T  29693715 cctt 29693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  84 gtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    |||||||||||| |||||||||| ||||||||  | ||||||||||||||||||||||| ||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9752188 - 9752109
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaa 82  Q
    |||||||||||||||||||||||| ||||||||||||||          ||||||| |||||||||||||||||||||||||    
T  9752188 agcctggccggaaatcatggggtgatgggtgttatgtat--ttttttttatgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 25987055 - 25987091
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatc 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  25987055 ctggccggaaatcatggggtggtgggtgttatgtatc 25987091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29693560 - 29693598
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  29693560 agcctggccggaaatcatggggtggtggatgttatgtat 29693598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  72 tgaaatctaaaggtgattattgtgcc-atgtcattcatgaatctttctta-taaaatcattcttgatatctagtattttcc 150  Q
    |||||||||| |||||||||| |||| || |||||| | ||| ||||||| |||||||||||||||||||||  |||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19015526 - 19015675
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19015526 agcctggccggaaatcatggggtggtgggtgttatgtatcttttttgt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 19015624  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||| ||||||||||||||||||||||||| ||| ||||||||    
T  19015625 tcattcttgaatttttcttataaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40215110 - 40215257
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40215110 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatg 40215208  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  40215209 tcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 36966648 - 36966501
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36966648 ctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtta 36966550  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    ||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  36966549 ttcttgaatttttcttataaaatcattcttgatatctagcattttcctt 36966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 41876385 - 41876234
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41876385 agcctggccgaaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatg 41876287  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  41876286 tcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 41876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 51737627 - 51737778
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||| ||| |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737627 agcctgaccgaaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 51737725  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  51737726 tcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 51737778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25463798 - 25463946
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25463798 agcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatg 25463896  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||||    
T  25463897 tcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6883609 - 6883757
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  6883609 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatg 6883707  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  6883708 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 20305070 - 20304922
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    |||||| |||||||||| |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20305070 tggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcat 20304971  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20304970 tcttgaatctttcttataaaatcattcttgatatctagcattttccttt 20304922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 37821777 - 37821629
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| ||||||||||||| |||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37821777 agcctggccgaaaatcatggggtgttgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatg 37821679  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  37821678 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 44094823 - 44094969
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44094823 ctggccggaaatcatggggtggtgggtgttatgtat--ttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtca 44094920  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    ||| || |||||||||||||||| ||||||||||||||| |||||||||    
T  44094921 ttcttggatctttcttataaaataattcttgatatctagcattttcctt 44094969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 25973534 - 25973677
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  25973534 ctggccgaaaatcatggggtggtgggtgttatgtat---tttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtca 25973630  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  25973631 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 18404618 - 18404720
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  150 ctt 152  Q
    |||    
T  18404718 ctt 18404720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 9910232 - 9910086
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||||||||||||||||| |||          ||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  9910232 tggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtca 9910133  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| ||||| ||||||||||||||||||||||||||||  |||||||    
T  9910132 ttcttgaatttttcttataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3559739 - 3559887
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgtta-tgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccat 99  Q
    ||||||| |||||||||||||||||||||||||| |||||          |||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  3559739 agcctgggcggaaatcatggggtggtgggtgttaatgtat--ttttttttatgaaagattaataaatgagactgaaatataaaggtgattattgtgtcat 3559836  T
Q  100 gtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
     |||||| || |||||||||||||||||||||||||||||||| |||||||    
T  3559837 atcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 33786516 - 33786423
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||| ||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccttt 33786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||| |||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||| |||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 44690914 - 44690825
Alignment:
Q  53 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatcta 141  Q
    |||||||||||||| |||||| ||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatcta 44690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattt 147  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||| ||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 27523196 - 27523048
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    |||||||||||||||||||||| ||||||||||||||          ||||||  ||||||||| ||||| ||||| || |||||||| | ||||||       
T  27523196 cctggccggaaatcatggggtgatgggtgttatgtat--ttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacg 27523099  T
Q  103 attcatgaatctttctt-ataaaatcattcttgatatctagtattttcctt 152  Q
    |||| |||||||||||| ||||||||||||||||||| ||  |||||||||    
T  27523098 attcttgaatctttcttgataaaatcattcttgatatataacattttcctt 27523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 10167569 - 10167673
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaat-ctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||| | |||  ||| |||||||||||||||| |||| ||  |||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  149 ccttt 153  Q
    |||||    
T  10167669 ccttt 10167673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  78 ctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctagtattttc 149  Q
    |||| ||||| |||| || |||||||||| |||||||||||| ||||||||||| ||||||||||| ||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 40273779 - 40273710
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatctag 142  Q
    |||||||| |||||||||| || |||||||||| ||||| |||||| | |||||| ||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctag 40273710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 40273829 - 40273862
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||||||    
T  40273829 ggccggaaatcatggggtggtgggtgttatgtat 40273862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 32000204 - 32000172
Alignment:
Q  7 gccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||||||||||||||||||||||||||||||||    
T  32000204 gccggaaatcatggggtggtgggtgttatgtat 32000172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 44690969 - 44690934
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  44690969 ctggccggaaatcatggggtgttgggtgttatgtat 44690934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  58 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatc 113  Q
    ||||||| | |||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    ||||||||||||||||||| | ||||||||||| | ||  |||||| |||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 102; Significance: 1e-50; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 26061 - 26209
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26061 ctggccggaaatcatgggatggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 26159  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  26160 ttcttgaatttttcttataaaatcattcttgatatctagcattttccttt 26209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 16109 - 16257
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16109 ctggccggaaatcatgggatggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtca 16207  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  16208 ttcttgaatttttcttataaaatcattcttgatatctagcattttccttt 16257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 8527 - 8605
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 83  Q
    |||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  8527 ctggccggaaatcatgggatggtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 24395096 - 24395241
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    |||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395096 cctggccggaaatcatggggtggtgggtgttatgtat--ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 24395193  T
Q  103 attcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  24395194 attcttgaatcttttttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 48880870 - 48880721
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  48880870 agcctggccggaaatcatggggtggtgggtgttatgtatctttttttt-atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatg 48880772  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  48880771 tcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 3962105 - 3962250
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962105 tggccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 3962202  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtattttcctt 152  Q
    || || || ||||||||||||||||||||||||||||| |||||||||    
T  3962203 tcttggatatttcttataaaatcattcttgatatctagcattttcctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 45637837 - 45637982
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637837 ctggccggaaatcatggggtggtggatgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 45637934  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    ||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  45637935 ttcttgaatctttcttataaaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 42611940 - 42612082
Alignment:
Q  8 ccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattca 107  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  42611940 ccggaaatcatggggtggtgggtgttatgtat-tttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattct 42612038  T
Q  108 tgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |  |||||||||||||||||||||||||||||||| ||||||||    
T  42612039 tagatctttcttataaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 15329398 - 15329547
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||||||||| ||||||| | |          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15329398 ctggccggaaatcatggggtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtca 15329497  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||| ||||| |||||||||||||||||||| |||||||| ||||||||||    
T  15329498 ttcttgaatatttcttataaaatcattctttatatctagcattttccttt 15329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 30848694 - 30848839
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    |||||||||||||||||| | ||||||||||||||||         |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30848694 ctggccggaaatcatgggatagtgggtgttatgtatctttttttt-atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtca 30848792  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| ||||| |||||||||||| |||||||||||||||| |||||||    
T  30848793 ttcttgaatttttcttataaaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 15577790 - 15577639
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgt 101  Q
    |||||||||||||||||| |||||||||||||||||            || ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15577790 ctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgt 15577691  T
Q  102 cattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  15577690 cattcttggatctttcttataaaatcattcttgatatctagcattttccttt 15577639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 4974674 - 4974532
Alignment:
Q  5 tggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 104  Q
    ||||||||||||||| |||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  4974674 tggccggaaatcatgaggtggtgggtgttatgtat-tttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcat 4974576  T
Q  105 tcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    || ||||||||| ||||||||||||||||||||||||| |||||    
T  4974575 tcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  150 c 150  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 2544737 - 2544631
Alignment:
Q  151 tttctaagaaacatgatgtctcatattttgtcaacaaattttgcatacatttttaacactt--tgtttacggtgaatactacagttttcctatttcatag 248  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||||    
T  2544737 tttctaagaaacatgatgtatcatattttgtcaacaaattttgcatacatttttaacactttatgtttactgtgaatactacagttttcctatatcatag 2544638  T
Q  249 tggaaag 255  Q
    |||||||    
T  2544637 tggaaag 2544631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  150 ct 151  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  || ||||||||||||||||||||||||||||| ||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  150 c 150  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 25167790 - 25167651
Alignment:
Q  4 ctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 103  Q
    ||||||||||||||||||||| |||||||||||||||         ||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  25167790 ctggccggaaatcatggggtgatgggtgttatgtatctttttttt-atgaaagatt------tgagactgaaatctaaaggtgattattgtgccatgtca 25167698  T
Q  104 ttcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    ||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  25167697 ttcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  50 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatcta 141  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||| | |||||||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 42696207 - 42696355
Alignment:
Q  3 cctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtc 102  Q
    ||||||||||||||| |||||||||| ||||||||||          ||||||  |||||||||||||||||||||||| |||||||||||| |||||||    
T  42696207 cctggccggaaatcaaggggtggtggatgttatgtat-tttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtc 42696305  T
Q  103 attcatgaatctttctt-ataaaatcattcttgatatctagtattttcct 151  Q
    |||| ||||| ||| || ||||||||||| ||||||||||  ||||||||    
T  42696306 attcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttc 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||   |||||||||||||||||||| ||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 18037157 - 18037250
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttccttt 153  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||| | ||||||||||   |||||||| ||||||||||| ||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttccttt 18037250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  60 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcct 151  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||| | ||| ||| ||   |||||||||||||||||||| ||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 20009991 - 20009902
Alignment:
Q  53 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatatcta 141  Q
    |||| ||||||||||||||| ||||||||   ||||||||||| |||||||||| ||||||||| || |||||||||||| |||||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatcta 20009902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 37477018 - 37476985
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    ||||||||||||||||||||||||||||||||||    
T  37477018 ggccggaaatcatggggtggtgggtgttatgtat 37476985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  77 tctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    ||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  84 gtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||||||||||| |||  | ||||||||  || |||||||||||||||||||| |||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt 119  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 15238509 - 15238538
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttat 35  Q
    ||||||||||||||||||||||||||||||    
T  15238509 ggccggaaatcatggggtggtgggtgttat 15238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 18037105 - 18037138
Alignment:
Q  6 ggccggaaatcatggggtggtgggtgttatgtat 39  Q
    |||| |||||||||||||||||||||||||||||    
T  18037105 ggccagaaatcatggggtggtgggtgttatgtat 18037138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| | ||  |||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 47972 - 48119
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  47972 agcctggccggaaatcatggggtggtgggtgttatgtat--ttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatg 48069  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  48070 tcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatgaatctttctt-ataaaatcattcttgata 137  Q
    |||||||| |||||||||| ||||||||||||| ||||  |||||| |||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

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Target: scaffold0096 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 41133 - 41280
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  41133 agcctggccggaaatcatggggtggtgggtgttatgtat--ttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccata 41230  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||||    
T  41231 tcattcttggatctttcttataaaatcattcttgatatctagcattttcc 41280  T

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Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  74 aaatctaaaggtgattattgtgccatgtcattcatg-aatctttcttataaaatcattcttgatat 138  Q
    |||||||| |||||||||| ||||||||||||| || ||| ||| | |||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

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Target: scaffold0204 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 4518 - 4666
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4518 agcctggccgaaaatcatggggtggtgggtgttatgtatctgtttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccata 4616  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  4617 tcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 4666  T

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Target: scaffold0471 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12964 - 13110
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  12964 agcctggccggaaatcatggggtggtggatgttatgtatctttttttt-atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatg 13062  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtatttt 148  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||    
T  13063 tcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

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Target: scaffold0178 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11743 - 11891
Alignment:
Q  1 agcctggccggaaatcatggggtggtgggtgttatgtatcnnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 100  Q
    |||||||||| |||||||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11743 agcctggccgaaaatcatggggtggtgagtgttatgtat-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 11841  T
Q  101 tcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||| | ||| ||||||||||||||||||||||||||||  |||||||    
T  11842 tcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 11891  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  84 gtgattattgtgccatgtcattcatgaatctttcttataaaatcattcttgatatctagtattttcc 150  Q
    |||||||||||||||||| |||  | ||||||||  || |||||||||||||||||||| |||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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