View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3630_low_3 (Length: 651)

Name: NF3630_low_3
Description: NF3630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3630_low_3
NF3630_low_3
[»] chr3 (15 HSPs)
chr3 (7-402)||(55124414-55124809)
chr3 (309-392)||(15450236-15450318)
chr3 (336-395)||(52399010-52399069)
chr3 (299-402)||(49161753-49161856)
chr3 (321-403)||(33968180-33968262)
chr3 (350-402)||(8652810-8652862)
chr3 (336-395)||(52398330-52398389)
chr3 (299-388)||(38337422-38337511)
chr3 (354-402)||(33454866-33454914)
chr3 (354-402)||(33455781-33455829)
chr3 (354-402)||(51421675-51421723)
chr3 (350-403)||(8653716-8653769)
chr3 (297-390)||(46187830-46187923)
chr3 (354-395)||(53393213-53393254)
chr3 (354-402)||(53714416-53714464)
[»] chr7 (19 HSPs)
chr7 (43-445)||(12732204-12732606)
chr7 (299-398)||(46757428-46757527)
chr7 (581-634)||(12732020-12732073)
chr7 (83-124)||(12732610-12732651)
chr7 (301-404)||(32871087-32871190)
chr7 (296-378)||(40905055-40905137)
chr7 (354-402)||(29060739-29060787)
chr7 (354-402)||(42607081-42607129)
chr7 (299-378)||(40905730-40905809)
chr7 (359-402)||(6730162-6730205)
chr7 (296-382)||(36661705-36661792)
chr7 (336-402)||(24995852-24995918)
chr7 (299-389)||(27599224-27599314)
chr7 (299-389)||(27600040-27600130)
chr7 (299-373)||(30915763-30915837)
chr7 (299-404)||(36845147-36845252)
chr7 (299-395)||(12732785-12732881)
chr7 (336-396)||(24996665-24996725)
chr7 (302-402)||(40258682-40258782)
[»] chr1 (21 HSPs)
chr1 (7-402)||(9430221-9430608)
chr1 (307-395)||(11426860-11426948)
chr1 (298-395)||(37889886-37889983)
chr1 (307-395)||(7463422-7463510)
chr1 (302-402)||(2687675-2687775)
chr1 (299-386)||(11469097-11469184)
chr1 (308-402)||(4641716-4641810)
chr1 (299-395)||(11032164-11032260)
chr1 (298-402)||(31787478-31787582)
chr1 (299-402)||(41884174-41884277)
chr1 (299-373)||(14925287-14925361)
chr1 (354-402)||(38931314-38931362)
chr1 (354-402)||(48835097-48835145)
chr1 (352-403)||(4640527-4640578)
chr1 (356-395)||(7464072-7464111)
chr1 (336-395)||(11031438-11031497)
chr1 (310-373)||(29334243-29334306)
chr1 (299-402)||(31788221-31788324)
chr1 (299-388)||(14924688-14924777)
chr1 (299-372)||(38618260-38618333)
chr1 (355-395)||(26534812-26534852)
[»] chr4 (22 HSPs)
chr4 (146-260)||(6680153-6680267)
chr4 (10-114)||(6680062-6680165)
chr4 (299-401)||(6680287-6680389)
chr4 (298-388)||(6246798-6246888)
chr4 (298-372)||(53664242-53664316)
chr4 (299-372)||(50710362-50710435)
chr4 (299-355)||(50709706-50709762)
chr4 (336-403)||(232031-232098)
chr4 (299-378)||(34956308-34956387)
chr4 (299-378)||(50709016-50709095)
chr4 (74-154)||(13856884-13856961)
chr4 (74-154)||(13868413-13868490)
chr4 (296-378)||(34956980-34957062)
chr4 (306-395)||(2093864-2093953)
chr4 (354-403)||(25970105-25970154)
chr4 (321-402)||(34155593-34155674)
chr4 (299-372)||(53665031-53665104)
chr4 (299-388)||(10421526-10421615)
chr4 (325-402)||(33370846-33370923)
chr4 (353-402)||(34154794-34154843)
chr4 (299-368)||(43079194-43079263)
chr4 (302-346)||(7987464-7987508)
[»] scaffold0071 (1 HSPs)
scaffold0071 (309-392)||(11873-11955)
[»] scaffold0107 (1 HSPs)
scaffold0107 (581-634)||(34165-34218)
[»] chr8 (16 HSPs)
chr8 (299-368)||(38686337-38686406)
chr8 (298-372)||(33802317-33802391)
chr8 (299-388)||(12350599-12350688)
chr8 (299-372)||(33801529-33801602)
chr8 (298-372)||(38686999-38687073)
chr8 (299-395)||(42915755-42915851)
chr8 (299-388)||(43924963-43925052)
chr8 (354-402)||(35840530-35840578)
chr8 (354-402)||(35943076-35943124)
chr8 (334-402)||(40450966-40451034)
chr8 (583-634)||(25434907-25434958)
chr8 (335-402)||(37562295-37562362)
chr8 (298-373)||(39257663-39257738)
chr8 (298-373)||(43971307-43971382)
chr8 (299-388)||(12349981-12350070)
chr8 (299-388)||(43924504-43924593)
[»] chr2 (15 HSPs)
chr2 (334-402)||(36390957-36391025)
chr2 (298-368)||(8536171-8536241)
chr2 (307-373)||(42370903-42370969)
chr2 (299-372)||(8536831-8536904)
chr2 (299-403)||(42369642-42369746)
chr2 (299-397)||(23875245-23875343)
chr2 (336-402)||(34617653-34617719)
chr2 (299-373)||(41768688-41768762)
chr2 (298-402)||(4975696-4975800)
chr2 (321-397)||(15602787-15602863)
chr2 (299-386)||(37545692-37545779)
chr2 (309-402)||(7868096-7868189)
chr2 (322-402)||(2307041-2307121)
chr2 (306-374)||(4058968-4059036)
chr2 (298-402)||(4993604-4993708)
[»] chr5 (12 HSPs)
chr5 (299-402)||(4554657-4554760)
chr5 (356-395)||(6805959-6805998)
chr5 (334-401)||(4789521-4789588)
chr5 (299-373)||(6804778-6804852)
chr5 (336-402)||(16689593-16689659)
chr5 (323-401)||(26712357-26712435)
chr5 (323-401)||(26982095-26982173)
chr5 (309-373)||(17767546-17767610)
chr5 (356-402)||(4820454-4820500)
chr5 (344-388)||(1282268-1282312)
chr5 (299-402)||(26711568-26711672)
chr5 (299-402)||(26981305-26981409)
[»] scaffold0189 (1 HSPs)
scaffold0189 (299-373)||(12804-12878)
[»] scaffold0041 (2 HSPs)
scaffold0041 (296-378)||(44881-44963)
scaffold0041 (299-378)||(44209-44288)
[»] scaffold0070 (1 HSPs)
scaffold0070 (583-635)||(24793-24845)
[»] chr6 (1 HSPs)
chr6 (334-402)||(25371169-25371237)
[»] scaffold2003 (1 HSPs)
scaffold2003 (296-402)||(473-579)


Alignment Details
Target: chr3 (Bit Score: 355; Significance: 0; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 7 - 402
Target Start/End: Complemental strand, 55124809 - 55124414
Alignment:
Q  7 gagaagaatcaaattaaacaagaagttgagttatgagaaaaggtgagtgataaaataataaattggggttttgttacaagtgagtgagtgaagattaaga 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55124809 gagaagaatcaaattaaacaagaagatgagttatgagaaaaggtgagtgataaaataataaattggggttttgttacaagtgagtgagtgaagattaaga 55124710  T
Q  107 agatgatttattaaattggtatttcatctctcaattgactaagatgatgattgaagtttaataattactaatggtggtgggtgagtggagaccgtgtttt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55124709 agatgatttattaaattggtatttcatctctcaattgactaagatgatgattaaagtttaataattactaatggtggtgggtgagtggagaccgtgtttt 55124610  T
Q  207 cattttaaggaaattttgatattgttgttgctgatgggttaatggtgatggaagagagagcggtggtggaagctaaagcgnnnnnnntttaatgttgaga 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||    
T  55124609 cattttaaggaaattttgatattgttgttgctgatgggttaatggtgatggaagagagagcggtggtggaagttaaagcgaaaaaaatttaatgttgaga 55124510  T
Q  307 gtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55124509 atctatgataaaactatgttctttacatgatctaatagtcaatatttattttcccatggtgggaaactctttccctttcccatgctaaaccccacc 55124414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 15450318 - 15450236
Alignment:
Q  309 ctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgct 392  Q
    ||||||||||| |||||||| ||| | ||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  15450318 ctatgataaaaatatgttctctacttaatctaatggtcaagattaactttcccatggt-ggaaactctttccctttcccatgct 15450236  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 336 - 395
Target Start/End: Original strand, 52399010 - 52399069
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  52399010 atctaatggtcaaaatttactttcccatgatgggaaactctttcccttttccatgctaaa 52399069  T

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Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 49161753 - 49161856
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    |||||| || ||||||||| | ||||||| ||||||||||||||  |||  |   ||||||||||||||||||||  || |||||||||||||||||||     
T  49161753 tgttgaaagactatgataatattatgttccttacatgatctaatgctcataaaaaactttcccatggtgggaaacaattcccctttcccatgctaaacct 49161852  T
Q  399 cacc 402  Q
    ||||    
T  49161853 cacc 49161856  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 33968262 - 33968180
Alignment:
Q  321 tatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacca 403  Q
    ||||||||| |  ||||||||| ||||| |  || ||||||||||||||||||   |||||||||||||||||||||||||||    
T  33968262 tatgttcttcaattgatctaatggtcaaaaaatattttcccatggtgggaaacaagttccctttcccatgctaaaccccacca 33968180  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 8652862 - 8652810
Alignment:
Q  350 atttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||||||||||||||||| |  || ||||||||||||||||||||||||    
T  8652862 atttactttcccatggtgggaaccgattcccctttcccatgctaaaccccacc 8652810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 52398389 - 52398330
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||| || || ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  52398389 atctaatggttaaaatttacttttccatggtgggaaactctttcccttttccattctaaa 52398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 38337422 - 38337511
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| ||||||||||||| |||||||| ||  | ||||||  ||||| |||  |||||||||||||||||||   ||||||||||||    
T  38337422 tgttgagtgtctatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaacttccctttccca 38337511  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 33454914 - 33454866
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  33454914 actttctcatggtgggaaacaattttcctttcccatgctaaaccccacc 33454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 33455781 - 33455829
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||    
T  33455781 actttcctatggtgggaaacaattcccctttcccatgctaaaccccacc 33455829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 51421675 - 51421723
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  51421675 actttcccatggtgggaaacaattcccctttctcatgctaaaccccacc 51421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 403
Target Start/End: Original strand, 8653716 - 8653769
Alignment:
Q  350 atttactttcccatggtgggaaactctttccctttcccatgctaaaccccacca 403  Q
    |||||||||| |||||||||||||  |  |||||| ||||||||||||||||||    
T  8653716 atttactttctcatggtgggaaacaatcccccttttccatgctaaaccccacca 8653769  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 46187830 - 46187923
Alignment:
Q  297 aatgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatg 390  Q
    ||||||||||||||||||||| || ||||||||| | | ||||| | || || ||| ||| |||||||||| |||| | ||  |||||||||||    
T  46187830 aatgttgagagtctatgataagacaatgttctttgcttaatctagtggttaaaattgactctcccatggtgagaaagttttatcctttcccatg 46187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 53393213 - 53393254
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  53393213 actttcccatagtgggaaactcttctcctttcccatgctaaa 53393254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 53714416 - 53714464
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||||| ||||||||   ||||||||||||||||||||| |||||    
T  53714416 actttcccatagtgggaaagaatttccctttcccatgctaaactccacc 53714464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 43 - 445
Target Start/End: Complemental strand, 12732606 - 12732204
Alignment:
Q  43 gaaaaggtgagtgataaaataataaattggggttttgttacaagtgagtgagtgaagattaagaagatgatttattaaattggtatttcatctctcaatt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12732606 gaaaaggtgagtgataaaataataaattggggttttgttacaagtgagtgagtgaagattaagaagatgatttattaaattggtatttcatctctcaatt 12732507  T
Q  143 gactaagatgatgattgaagtttaataattactaatggtggtgggtgagtggagaccgtgttttcattttaaggaaattttgatattgttgttgctgatg 242  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12732506 gactaagatgatgattaaagtttaataattactaatggtggtgggtgagtggagaccgtgttttcattttaaggaaattttgatattgttgttgctgatg 12732407  T
Q  243 ggttaatggtgatggaagagagagcggtggtggaagctaaagcgnnnnnnntttaatgttgagagtctatgataaaactatgttctttacatgatctaat 342  Q
    |||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12732406 ggttaatggtgatggaagagagagcggtggtggaagctaaagcaaaaaaaaattaatgttgagagtctatgataaaactatgttctttacatgatctaat 12732307  T
Q  343 agtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccaccacggtttggtgggatattatgcccgtttttgttcgggagt 442  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  12732306 ggtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccaccaaggtttgctgggatattatgcccgtttttgtttgggagt 12732207  T
Q  443 att 445  Q
    |||    
T  12732206 att 12732204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 46757527 - 46757428
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    ||||||| ||||||||||||| |||||||| ||| | ||||||| |||||||||||||||| |||||||| ||||   | | ||||||||| ||||||||    
T  46757527 tgttgagtgtctatgataaaattatgttctctactttatctaatggtcaatatttactttctcatggtggaaaacaactcctctttcccatactaaaccc 46757428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 581 - 634
Target Start/End: Complemental strand, 12732073 - 12732020
Alignment:
Q  581 gggtgagtggcagaggattggagtcccctaagggtgccgacctagtcgggatgt 634  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  12732073 gggtgagtggcagaggattgaagtcccctgggggtgccgacctagtcgggatgt 12732020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 12732610 - 12732651
Alignment:
Q  83 caagtgagtgagtgaagattaagaagatgatttattaaattg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12732610 caagtgagtgagtgaagattaagaagatgatttattaaattg 12732651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Original strand, 32871087 - 32871190
Alignment:
Q  301 ttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaacccca 400  Q
    ||||||| ||||||||| | |||||||||||||||||| ||| ||| | |   ||||||| ||||||||||||   | ||| ||||||||||||||||||    
T  32871087 ttgagagactatgataatattatgttctttacatgatcaaatggtccaaaaaaactttcctatggtgggaaacaactccccattcccatgctaaacccca 32871186  T
Q  401 ccac 404  Q
    ||||    
T  32871187 ccac 32871190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 40905137 - 40905055
Alignment:
Q  296 taatgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||   |||| ||| |||||||||| || |||||||||||    
T  40905137 taatgttgagagtccatggtaaaaatatgttctttacttgatctaaggatcaaaattaactttcccatagtaggaaactcttt 40905055  T

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Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 29060739 - 29060787
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||    
T  29060739 actttcccatggtgggaaacaattcccctttcccatgctaaaccccacc 29060787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 42607129 - 42607081
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||    
T  42607129 actttcccatggtgggaaacaattcccctttcccatgctaaaccccacc 42607081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 40905730 - 40905809
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    ||||||||||||||||||||| | |||||||||  ||||||||  ||||| ||| ||||||| ||  |||||||||||||    
T  40905730 tgttgagagtctatgataaaaatgtgttctttatttgatctaagggtcaaaattaactttcctataatgggaaactcttt 40905809  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 402
Target Start/End: Original strand, 6730162 - 6730205
Alignment:
Q  359 cccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  6730162 cccatggtgggaaacaacttccctttcccatgctaaaccccacc 6730205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 382
Target Start/End: Complemental strand, 36661792 - 36661705
Alignment:
Q  296 taatgttgagagtctatgataaaactatgttctttacatgatctaatagtca-atatttactttcccatggtgggaaactctttccct 382  Q
    ||||| ||||||||||| |||||| |||| |||| |  ||||||||| |||| | |  |||||||||||||||||||| |||||||||    
T  36661792 taatggtgagagtctataataaaattatgctcttcaattgatctaatggtcacaaaaatactttcccatggtgggaaattctttccct 36661705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 24995918 - 24995852
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||| ||||| |  |||||||||||||||||||||   | ||||||||||| ||||||||||||    
T  24995918 atctaatggtcaaaaaatactttcccatggtgggaaacaactcccctttcccattctaaaccccacc 24995852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 27599314 - 27599224
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccat 389  Q
    ||||||| ||||||||||| | | ||||| |||| | ||||||| |||||  || ||||||||||||||||||||   | |||||||||||    
T  27599314 tgttgagtgtctatgataagaatgtgttcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactcccctttcccat 27599224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 27600040 - 27600130
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccat 389  Q
    ||||||||||||||||||| | | ||||| |||| | ||||| | |||||  || ||||||||||||||||||||   | |||||||||||    
T  27600040 tgttgagagtctatgataagaatgtgttcattacttaatctagtggtcaaatttaactttcccatggtgggaaacaactcccctttcccat 27600130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 30915837 - 30915763
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    |||||||||  |||||||||| |||| |||| |  ||||||||| |  || ||||||||||||||||||||||||    
T  30915837 tgttgagagagtatgataaaagtatggtcttcatttgatctaatgggtaaaatttactttcccatggtgggaaac 30915763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 404
Target Start/End: Original strand, 36845147 - 36845252
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    ||||||| | ||||||||| | ||||||| |||||| ||||||| ||||  |   ||||| ||||| || |||||  || |||||||||||||||||||     
T  36845147 tgttgagggactatgataatattatgttccttacataatctaatggtcataaaaaacttttccatgatgagaaacaattcccctttcccatgctaaacct 36845246  T
Q  399 caccac 404  Q
    ||||||    
T  36845247 caccac 36845252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 395
Target Start/End: Original strand, 12732785 - 12732881
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    |||||||||| ||  |||| || ||||||||||| | ||||||| |  || |||||||||| |||||||||||||| ||  || || ||||||||||    
T  12732785 tgttgagagtgtaccataagacaatgttctttacttaatctaatggataaaatttactttctcatggtgggaaactattgtccatttccatgctaaa 12732881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 24996665 - 24996725
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaac 396  Q
    ||||||| ||||| |  |||||||||||||||||||||   | ||||||||||||||||||    
T  24996665 atctaatggtcaaaaaatactttcccatggtgggaaacaactcccctttcccatgctaaac 24996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 40258682 - 40258782
Alignment:
Q  302 tgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccac 401  Q
    ||||| |||||||||||| |||||| ||||  | || |||| ||| | || ||||||||||||||| |||||  ||  | ||||||||||||||| ||||    
T  40258682 tgagaatctatgataaaaatatgttatttaattaatttaatggtctaaatctactttcccatggtgagaaacaattatcatttcccatgctaaactccac 40258781  T
Q  402 c 402  Q
    |    
T  40258782 c 40258782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 7 - 402
Target Start/End: Original strand, 9430221 - 9430608
Alignment:
Q  7 gagaagaatcaaattaaacaagaagttgagttatgagaaaaggtgagtgataaaataataaattggggttttgttacaagtgagtgagtgaagattaaga 106  Q
    ||||||||||||||||||  ||||| || ||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9430221 gagaagaatcaaattaaattagaagatgggttatgaaaaaatgtgagtggtaaaataataaattggggttttgttacaagtgagtgggtgaagattaaga 9430320  T
Q  107 agatgatttattaaattggtatttcatctctcaattgactaagatgatgattgaagtttaataattactaatggtggtgggtgagtggagaccgtgtttt 206  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | | | ||||||||||||||||||| ||||    
T  9430321 agatgatttatgaaattggtatttcatctctcaattgactaagaagatgattgaagtttattaattactgaggatagtgggtgagtggagaccgtatttt 9430420  T
Q  207 cattttaaggaaattttgatattgttgttgctgatgggttaatggtgatggaagagagagcggtggtggaagctaaagcg-nnnnnnntttaatgttgag 305  Q
    || |||||||||||||||| |          || | |||||||||| ||||||||||||| ||||||||||||||  | |        | || |||||||    
T  9430421 ca-tttaaggaaattttgaca--------catgctaggttaatggtaatggaagagagagtggtggtggaagctacggtgaaaaaaaatctagtgttgag 9430511  T
Q  306 agtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||| || |||||||||||||||||||| | ||||||| |||| | |||||||  ||| ||||| |||||||||  |||||||||| ||||| |||||    
T  9430512 agtttaggataaaactatgttctttacttaatctaatggtcagtgtttacttgtccaaggtggaaaactctttatctttcccatgttaaactccacc 9430608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 11426948 - 11426860
Alignment:
Q  307 gtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||||||||||| |||||||||  | ||||||| ||||| |||  |||||||||||||||||||||||||||||| ||||||||||    
T  11426948 gtctatgataaaactgtgttctttagttaatctaatggtcaaaattagctttcccatggtgggaaactctttcccttttccatgctaaa 11426860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 298 - 395
Target Start/End: Complemental strand, 37889983 - 37889886
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    |||||||  ||||||||||||||| |||||||||  | ||||||| ||||| |||  ||||||||||||||||||||||||||||||  |||||||||    
T  37889983 atgttgatggtctatgataaaactgtgttctttagttaatctaatggtcaaaattcgctttcccatggtgggaaactctttccctttttcatgctaaa 37889886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 7463510 - 7463422
Alignment:
Q  307 gtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||||||||||| |||||||||  | ||||||| ||||| |||  |||||||||||||||||||||||| ||||| ||||||||||    
T  7463510 gtctatgataaaactgtgttctttatttaatctaatggtcaaaattagctttcccatggtgggaaactcttttccttttccatgctaaa 7463422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 2687675 - 2687775
Alignment:
Q  302 tgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccac 401  Q
    |||||||||||||||||||||||||| |||  | ||||||  ||||| | | | ||||||||||||||||||  ||  ||||||||||||||||||||||    
T  2687675 tgagagtctatgataaaactatgttccttagttaatctaactgtcaaaaataattttcccatggtgggaaacaattatcctttcccatgctaaaccccac 2687774  T
Q  402 c 402  Q
    |    
T  2687775 c 2687775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 386
Target Start/End: Complemental strand, 11469184 - 11469097
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcc 386  Q
    ||||||| ||||||||||||| |||||||| ||| | ||||||| ||||| |||  |||||||||||||||||||   ||||||||||    
T  11469184 tgttgagtgtctatgataaaagtatgttctctaccttatctaatggtcaaaattagctttcccatggtgggaaacaacttccctttcc 11469097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 402
Target Start/End: Original strand, 4641716 - 4641810
Alignment:
Q  308 tctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||||||||||| ||  ||||| ||| ||  | | |||||||||| |||||||||||  || |||||||||||||||||| |||||    
T  4641716 tctatgataaaactatgttctctatttgatccaatggttgaaaattactttcccttggtgggaaacaattcccctttcccatgctaaactccacc 4641810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 395
Target Start/End: Original strand, 11032164 - 11032260
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||||||| ||||||| | | ||||| |||| | ||||||| |||||  |  ||||||||||||||||||||| || |||||||||||| ||||    
T  11032164 tgttgagagtccatgataagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccatgttaaa 11032260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 31787582 - 31787478
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    ||||||||  |||||||||||| |||||||| ||| | ||||||| ||||| |||  |||| ||||||||||||||   ||||| ||||||| ||||||     
T  31787582 atgttgagtctctatgataaaagtatgttctctactttatctaatggtcaaaattagcttttccatggtgggaaacaacttcccattcccatactaaacg 31787483  T
Q  398 ccacc 402  Q
    |||||    
T  31787482 ccacc 31787478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 41884174 - 41884277
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    |||| |||||| ||||||| |  |||||||| |  |||||||||||| |  ||  ||||||| ||||||||||||  ||||||||| |||||||||||||    
T  41884174 tgttaagagtccatgataatatcatgttcttcatttgatctaatagttagaatcaactttcctatggtgggaaacaatttcccttttccatgctaaaccc 41884273  T
Q  399 cacc 402  Q
    ||||    
T  41884274 cacc 41884277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 14925287 - 14925361
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||| ||||||||||||| |||||||| ||  | ||||||| ||||| |||  |||||||||||||||||||    
T  14925287 tgttgagtgtctatgataaaagtatgttctctagtttatctaatggtcaaaattagctttcccatggtgggaaac 14925361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 38931362 - 38931314
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  38931362 actttcccatggtgggaaacaattcccctttctcatgctaaaccccacc 38931314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 48835097 - 48835145
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||||| ||||  || ||||||||||||||||||||||||    
T  48835097 actttcccatggtggaaaacaattcccctttcccatgctaaaccccacc 48835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 403
Target Start/End: Complemental strand, 4640578 - 4640527
Alignment:
Q  352 ttactttcccatggtgggaaactctttccctttcccatgctaaaccccacca 403  Q
    ||||||||||||||||||||||  || |||||| ||||||||||| ||||||    
T  4640578 ttactttcccatggtgggaaacaattcccctttaccatgctaaactccacca 4640527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 395
Target Start/End: Original strand, 7464072 - 7464111
Alignment:
Q  356 tttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  7464072 tttcccatggtgggaaactctttcccttttccatgttaaa 7464111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 11031497 - 11031438
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||| |||||  || ||||||||||||||||||||| || |||||||||||| ||||    
T  11031497 atctaatggtcaaatttaactttcccatggtgggaaactattcccctttcccatgttaaa 11031438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 29334306 - 29334243
Alignment:
Q  310 tatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    |||||||||| |||| ||||||  ||||||||| |  || ||||||||||||||||||||||||    
T  29334306 tatgataaaagtatggtctttatttgatctaatgggtaaaatttactttcccatggtgggaaac 29334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 402
Target Start/End: Original strand, 31788221 - 31788324
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    ||||||| ||||||| ||||| |||||||| ||  | ||||||| || || ||| ||||||||||||||||||||   ||| | ||||||| |||||||     
T  31788221 tgttgagtgtctatggtaaaagtatgttctctattttatctaatggttaaaattaactttcccatggtgggaaacaacttctcattcccatactaaacct 31788320  T
Q  399 cacc 402  Q
    ||||    
T  31788321 cacc 31788324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 14924777 - 14924688
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| ||||||||||||| |||||||| ||  | || |||  ||||| |||  |||||||||||||||||||   ||||||||||||    
T  14924777 tgttgagtgtctatgataaaaatatgttctctatttaatttaacggtcaaaattagctttcccatggtgggaaacaacttccctttccca 14924688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 38618333 - 38618260
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    ||||||||||||||||||| | | |||||  ||| | ||||||| |||||  || |||||||||||||||||||    
T  38618333 tgttgagagtctatgataagaatgtgttcactacttaatctaatggtcaaacttaactttcccatggtgggaaa 38618260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 395
Target Start/End: Original strand, 26534812 - 26534852
Alignment:
Q  355 ctttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    |||||| ||||||| |||||||||||||||| |||||||||    
T  26534812 ctttcctatggtggaaaactctttccctttctcatgctaaa 26534852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 4e-46; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 6680153 - 6680267
Alignment:
Q  146 taagatgatgattgaagtttaataattactaatggtggtgggtgagtggagaccgtgttttcattttaaggaaattttgatattgttgttgctgatgggt 245  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  6680153 taagaagatgattgaattttaataattactgatggtggtgggtgagtggagaccgtgttttcagtttaaggaaattttgatactgttgttgctgatgggt 6680252  T
Q  246 taatggtgatggaag 260  Q
    |||||||||||||||    
T  6680253 taatggtgatggaag 6680267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 6680062 - 6680165
Alignment:
Q  10 aagaatcaaattaaacaagaagttgagttatgagaaaaggtgagtgataaaataataaattggggttttgttacaagtgagtgagtgaagattaagaaga 109  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6680062 aagaatcaaattaaataagaagatgagttatgagaaaaggtgagtgataaaata-taaattggggttttgttacaagtgagtgagtgaagattaagaaga 6680160  T
Q  110 tgatt 114  Q
    |||||    
T  6680161 tgatt 6680165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 299 - 401
Target Start/End: Original strand, 6680287 - 6680389
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    |||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6680287 tgttgagaatctatgataaaactatgttctttacttaatctaatggtcaatatttactttcccatggtgagaaactctttccctttcccatgctaaaccc 6680386  T
Q  399 cac 401  Q
    |||    
T  6680387 cac 6680389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 298 - 388
Target Start/End: Complemental strand, 6246888 - 6246798
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    |||||||| ||||||||||||| |||||||| ||| | ||||||| ||||| ||| ||||||||||||||||||||  |||||||||||||    
T  6246888 atgttgagtgtctatgataaaagtatgttctctaccttatctaatggtcaaaattaactttcccatggtgggaaacaatttccctttccca 6246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 53664316 - 53664242
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    |||||||| |||||||||||||| ||||||| ||  | ||||||| |||||||||||||||||||||||||||||    
T  53664316 atgttgagtgtctatgataaaaccatgttctctattttatctaatggtcaatatttactttcccatggtgggaaa 53664242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 50710362 - 50710435
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    ||||||| ||||||||||||   ||||||| ||| | ||||||| |||||||||||||||||||||||||||||    
T  50710362 tgttgagtgtctatgataaattcatgttctctactttatctaatggtcaatatttactttcccatggtgggaaa 50710435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 50709762 - 50709706
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttac 355  Q
    ||||||| |||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  50709762 tgttgagtgtctatgataaaactatgttctctactttatctaatagtcaatatttac 50709706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 232031 - 232098
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacca 403  Q
    ||||||| || || ||||||||||||||||||||||||   ||||||||||||| |||||||||||||    
T  232031 atctaatggttaaaatttactttcccatggtgggaaacaacttccctttcccatactaaaccccacca 232098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 34956387 - 34956308
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    ||||||||||||||||||||| | |||||||||| ||||||||  ||||| ||| ||||||| ||  |||||||||||||    
T  34956387 tgttgagagtctatgataaaaatgtgttctttacttgatctaagggtcaaaattaactttcctataatgggaaactcttt 34956308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 50709095 - 50709016
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    ||||||||||||||||||||| | |||||||||| ||||||||  ||||| ||| ||||||| ||  ||||||| |||||    
T  50709095 tgttgagagtctatgataaaaatgtgttctttacttgatctaagggtcaaaattaactttcctataatgggaaattcttt 50709016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 13856961 - 13856884
Alignment:
Q  74 gttttgttacaagtgagtgagtgaagattaagaagatgatttattaaattggtatttcatctctcaattgactaagatgat 154  Q
    ||||||||| ||  |||||||||||||||||||   | ||| || |||||||||||||||||| |||||| ||||||||||    
T  13856961 gttttgttataaaagagtgagtgaagattaaga---ttattgatgaaattggtatttcatctcacaattggctaagatgat 13856884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 13868490 - 13868413
Alignment:
Q  74 gttttgttacaagtgagtgagtgaagattaagaagatgatttattaaattggtatttcatctctcaattgactaagatgat 154  Q
    ||||||||| ||  |||||||||||||||||||   | ||| || |||||||||||||||||| |||||| ||||||||||    
T  13868490 gttttgttataaaagagtgagtgaagattaaga---ttattgatgaaattggtatttcatctcacaattggctaagatgat 13868413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 34956980 - 34957062
Alignment:
Q  296 taatgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||   |||| ||| ||||| |||| || |||||||||||    
T  34956980 taatgttgagagtccatggtaaaaatatgttctttacttgatctaaggatcaaaattaacttttccatagtaggaaactcttt 34957062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 2093864 - 2093953
Alignment:
Q  306 agtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    |||||||||||||| |||||||| ||  |||||||||  |||||| | ||||||||||||| | | | |||||  |||||||||||||||    
T  2093864 agtctatgataaaagtatgttctatatttgatctaatgatcaataataactttcccatggtagaacattctttaactttcccatgctaaa 2093953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 403
Target Start/End: Complemental strand, 25970154 - 25970105
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacca 403  Q
    ||||||||||||||||||||   | |||||||||||||||||||||||||    
T  25970154 actttcccatggtgggaaacaactcccctttcccatgctaaaccccacca 25970105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 34155593 - 34155674
Alignment:
Q  321 tatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||| |  ||||||||| ||||| |  |||||| ||||||||| ||||   ||||||||||||||||||||||||||    
T  34155593 tatgttcttcaattgatctaatggtcaaaaaatacttttccatggtggaaaacaagttccctttcccatgctaaaccccacc 34155674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 53665031 - 53665104
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    ||||||| |||||||||||||| ||||||| ||| | || |||| |||||||||||||||   |||||||||||    
T  53665031 tgttgagtgtctatgataaaaccatgttctctactttatttaatggtcaatatttacttttttatggtgggaaa 53665104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 10421526 - 10421615
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| ||||||||||||| |||||||| ||  | ||||||  ||||| |||  |||||||||||||| ||||   ||||||||||||    
T  10421526 tgttgagtgtctatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtggaaaacaacttccctttccca 10421615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 33370846 - 33370923
Alignment:
Q  325 ttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||| ||| ||||||||| |  || ||| ||||||||||||||||||||   |  |||||||||||||||||||||||    
T  33370846 ttctctacttgatctaatggctaacattaactttcccatggtgggaaacaagtatcctttcccatgctaaaccccacc 33370923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 34154843 - 34154794
Alignment:
Q  353 tactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||||||||||||||||   || | |||||||||||||||||||||    
T  34154843 tactttcccatggtgggaaacaagtttcttttcccatgctaaaccccacc 34154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 43079263 - 43079194
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgg 368  Q
    ||||||||||  ||||||| |||||||||||||| ||||||||| |  || ||| |||||||||| ||||    
T  43079263 tgttgagagtgcatgataagactatgttctttacttgatctaatggataaaattaactttcccattgtgg 43079194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 7987508 - 7987464
Alignment:
Q  302 tgagagtctatgataaaactatgttctttacatgatctaatagtc 346  Q
    |||||| ||||||||| | ||||||| ||||||||||||||||||    
T  7987508 tgagagactatgataatattatgttccttacatgatctaatagtc 7987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 309 - 392
Target Start/End: Original strand, 11873 - 11955
Alignment:
Q  309 ctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgct 392  Q
    ||||||||||| |||||||| ||| | ||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  11873 ctatgataaaaatatgttctctacttaatctaatggtcaagattaactttcccatggt-ggaaactctttccctttcccatgct 11955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 581 - 634
Target Start/End: Complemental strand, 34218 - 34165
Alignment:
Q  581 gggtgagtggcagaggattggagtcccctaagggtgccgacctagtcgggatgt 634  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  34218 gggtgagtggcagaggatttgagtcccctgagggtgccgacctagtcgggatgt 34165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 38686406 - 38686337
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgg 368  Q
    ||||||| |||||||||||||| ||||||| ||| | ||||||| |||||||||||||||||||||||||    
T  38686406 tgttgagtgtctatgataaaaccatgttctctactttatctaatggtcaatatttactttcccatggtgg 38686337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 33802317 - 33802391
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    |||||||| |||||||||||||| ||||||| ||  | || |||| |||||||||||||||||||||||||||||    
T  33802317 atgttgagtgtctatgataaaaccatgttctctattttatttaatggtcaatatttactttcccatggtgggaaa 33802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 12350599 - 12350688
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| ||||||||||||| |||||||| ||| | ||||||| ||||| |||   ||||||||||||||||||  |||||||||||||    
T  12350599 tgttgagtgtctatgataaaagtatgttctctaccttatctaatggtcaaaattaggtttcccatggtgggaaacaatttccctttccca 12350688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 33801602 - 33801529
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    ||||||| |||||||||||||| ||||||| ||| | || |||| ||||||||||||||| |||||||||||||    
T  33801602 tgttgagtgtctatgataaaaccatgttctctactttatttaatggtcaatatttacttttccatggtgggaaa 33801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 38686999 - 38687073
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    |||||||| |||||||||||||  ||||||| ||| | |||||||  ||||||||||||||||||| ||||||||    
T  38686999 atgttgagtgtctatgataaaatcatgttctctactttatctaatgatcaatatttactttcccattgtgggaaa 38687073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 395
Target Start/End: Original strand, 42915755 - 42915851
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    |||| |||||||||||||| || ||||||||||  | || |||||||||| ||  ||||||| |||||||||||||  |||| ||||||||| ||||    
T  42915755 tgttaagagtctatgataataccatgttctttatttaatttaatagtcaaaatcaactttcctatggtgggaaactagttccatttcccatgttaaa 42915851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 43924963 - 43925052
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| ||||||||||||| |||||||| ||  | ||||||  ||||| ||| |||||| |||||||||||||   ||||||||||||    
T  43924963 tgttgagtgtctatgataaaaatatgttctctatttaatctaacggtcaaaattaactttctcatggtgggaaacaacttccctttccca 43925052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 35840530 - 35840578
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||||| |||||||||   ||||||||||||||||||||||||||    
T  35840530 actttcccatcgtgggaaacaacttccctttcccatgctaaaccccacc 35840578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 35943124 - 35943076
Alignment:
Q  354 actttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||| |||||||||||||||   ||||||||||||||||||||||||||    
T  35943124 acttccccatggtgggaaacaacttccctttcccatgctaaaccccacc 35943076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 40450966 - 40451034
Alignment:
Q  334 tgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||| || || ||||||||||||||||||||||||   || | |||||||| ||||||||||||    
T  40450966 tgatctaatggttaaaatttactttcccatggtgggaaacaacttacatttcccatactaaaccccacc 40451034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 583 - 634
Target Start/End: Complemental strand, 25434958 - 25434907
Alignment:
Q  583 gtgagtggcagaggattggagtcccctaagggtgccgacctagtcgggatgt 634  Q
    ||||| ||||||||||||||||||| | | |||||||||||||||| |||||    
T  25434958 gtgagcggcagaggattggagtcccttgaaggtgccgacctagtcgagatgt 25434907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 37562362 - 37562295
Alignment:
Q  335 gatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||| || || ||| ||||||| ||||||||||||  ||  |||||||||||||||||||||||    
T  37562362 gatctaatggttaaaattgactttcctatggtgggaaacaattctcctttcccatgctaaaccccacc 37562295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 39257738 - 39257663
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||||  |||||||||||| |||||||| ||| | || |||| ||||| |||  |||||||||||||||||||    
T  39257738 atgttgagtctctatgataaaagtatgttctctactttatttaatggtcaaaattagctttcccatggtgggaaac 39257663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 43971382 - 43971307
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||||  |||||||||||| |||||||| ||| | || |||| ||||| |||  |||||||||||||||||||    
T  43971382 atgttgagtctctatgataaaagtatgttctctactttatttaatggtcaaaattagctttcccatggtgggaaac 43971307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 12350070 - 12349981
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| |||||||||||||  ||||||||||| | ||||||| || || |||   ||| ||||||||||||||   ||||||||||||    
T  12350070 tgttgagtgtctatgataaaagcatgttctttactttatctaatggttaaaattagtttttccatggtgggaaacaacttccctttccca 12349981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 43924593 - 43924504
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||||| || |||||||||| |||||||| ||  | ||||||  ||||| |||  |||||||||||||||||||   ||||||||||||    
T  43924593 tgttgagtgtttatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaacttccctttccca 43924504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 36391025 - 36390957
Alignment:
Q  334 tgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||| || || ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  36391025 tgatctaatggttaaaatttactttcccatggtgggaaacaacttccctttcccatgctaaaccccacc 36390957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 8536241 - 8536171
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgg 368  Q
    |||||||| |||||||||||||  ||||||| ||| | ||||||| |||||||||||||||||||||||||    
T  8536241 atgttgagtgtctatgataaaatcatgttctctactttatctaatcgtcaatatttactttcccatggtgg 8536171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 373
Target Start/End: Original strand, 42370903 - 42370969
Alignment:
Q  307 gtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||||||||||||| ||||  || | ||||||| | ||||||||||||||||||||||||||||    
T  42370903 gtctatgataaaactatattctccactttatctaatggccaatatttactttcccatggtgggaaac 42370969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 8536831 - 8536904
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaa 372  Q
    ||||||| |||||||||||||| ||||||| ||| | ||||||| ||||| ||||||||| ||||||| |||||    
T  8536831 tgttgagtgtctatgataaaaccatgttctctactttatctaatggtcaacatttacttttccatggtaggaaa 8536904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 42369746 - 42369642
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    ||||||| ||||||||||||| |||||||| ||| | ||||||| |  |||||||||||||||||||   |||||   || ||||| |||| ||||||||    
T  42369746 tgttgagtgtctatgataaaattatgttctctactttatctaatggctaatatttactttcccatggattgaaacaactttccttttccatactaaaccc 42369647  T
Q  399 cacca 403  Q
    |||||    
T  42369646 cacca 42369642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 23875343 - 23875245
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    |||||| || ||||||||| | ||||||| |||||||||||||| ||||  |   ||||||||||| || |||||  || |||||||||||||||||||    
T  23875343 tgttgaaagactatgataatattatgttccttacatgatctaatggtcataaaaaactttcccatgatgcgaaacaattcccctttcccatgctaaacc 23875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 34617719 - 34617653
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||| ||||| | | ||||||||||||||||||||  ||  |||||||||||||||||||||||    
T  34617719 atctaatggtcaaaaataactttcccatggtgggaaacaattatcctttcccatgctaaaccccacc 34617653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 41768688 - 41768762
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||||| |||||||||   | |||||||||| | ||||||| ||||| ||| ||||||||||||||||||||    
T  41768688 tgttgagagactatgataactatgtgttctttacctaatctaatggtcaaaattgactttcccatggtgggaaac 41768762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 4975800 - 4975696
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    ||||||||  |||||||||||| |||||||| ||| | || |||| ||||| |||  |||| ||||||||||||||   ||||| ||||||| ||||||     
T  4975800 atgttgagtctctatgataaaagtatgttctctactttatttaatggtcaaaattagcttttccatggtgggaaacaacttcccattcccatactaaacg 4975701  T
Q  398 ccacc 402  Q
    |||||    
T  4975700 ccacc 4975696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 15602787 - 15602863
Alignment:
Q  321 tatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    ||||||||| | |||||||||| ||||| |  || ||||||||||||||||||   |||||||||| ||||||||||    
T  15602787 tatgttcttcaaatgatctaatggtcaaaaaatattttcccatggtgggaaacaacttccctttcctatgctaaacc 15602863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 386
Target Start/End: Complemental strand, 37545779 - 37545692
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcc 386  Q
    ||||||| ||||||||||| | | ||||| |||| | ||||||| |||||  || ||||||||||||||||||||   ||||||||||    
T  37545779 tgttgagtgtctatgataagaatgtgttcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaacttccctttcc 37545692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 402
Target Start/End: Original strand, 7868096 - 7868189
Alignment:
Q  309 ctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||  | || ||||||  ||||||| | || || ||||||||||||||||||||||||   | ||||||| ||||||||| ||||||    
T  7868096 ctatgataaatatgtgctctttatttgatctagtggttaaaatttactttcccatggtgggaaacaactcccctttctcatgctaaatcccacc 7868189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 2307041 - 2307121
Alignment:
Q  322 atgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||| | |||||||||| ||||  |  ||||||| |||||||| ||||   ||||||||||||||||||||| ||||    
T  2307041 atgttcttcaaatgatctaatggtcacaaaatactttctcatggtggaaaacaacttccctttcccatgctaaacctcacc 2307121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 4058968 - 4059036
Alignment:
Q  306 agtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaact 374  Q
    |||||||||||| || |||||||  |  ||||||||||||||| ||  ||||||| |||||||||||||    
T  4058968 agtctatgataataccatgttctccatttgatctaatagtcaaaatcaactttcctatggtgggaaact 4059036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 4993708 - 4993604
Alignment:
Q  298 atgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    ||||||||  |||||||||||| |||||||| ||| | || |||| ||||| |||  |||| ||||||||| ||||   ||||| ||||||| ||||||     
T  4993708 atgttgagtctctatgataaaagtatgttctctactttatttaatggtcaaaattagcttttccatggtggaaaacaacttcccattcccatactaaacg 4993609  T
Q  398 ccacc 402  Q
    |||||    
T  4993608 ccacc 4993604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 4554760 - 4554657
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccc 398  Q
    ||||||| ||||||||||||| |||||||| ||| | ||||||| ||||| |||  ||||| |||||||| ||||  ||| |||||||||| ||||||||    
T  4554760 tgttgagtgtctatgataaaagtatgttctctactttatctaatggtcaaaattagctttctcatggtggaaaacaattttcctttcccatactaaaccc 4554661  T
Q  399 cacc 402  Q
    ||||    
T  4554660 cacc 4554657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 395
Target Start/End: Original strand, 6805959 - 6805998
Alignment:
Q  356 tttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6805959 tttcccatggtgggaaactctttccctttcccatgctaaa 6805998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 4789588 - 4789521
Alignment:
Q  334 tgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccac 401  Q
    ||||||||| ||||| | | ||||||||||||||||||||   | |||||||||||||||||||||||    
T  4789588 tgatctaatggtcaagaataactttcccatggtgggaaacaactcccctttcccatgctaaaccccac 4789521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 6804778 - 6804852
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||||| |||||||||   | |||||||||| | ||||||| ||||| ||| ||||||||||||||||||||    
T  6804778 tgttgagagactatgataactatgtgttctttacctaatctaatggtcaaaattgactttcccatggtgggaaac 6804852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 16689659 - 16689593
Alignment:
Q  336 atctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    |||||||||| || ||||||||| |||||||||||||    ||||||||||||| ||||||||||||    
T  16689659 atctaatagttaaaatttacttttccatggtgggaaagaacttccctttcccatactaaaccccacc 16689593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 401
Target Start/End: Original strand, 26712357 - 26712435
Alignment:
Q  323 tgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccac 401  Q
    |||||||||| |||||| || || || |||  |||||||||||||||||||   |||||||||||||||||||| ||||    
T  26712357 tgttctttacttgatctgatggttaaaattagctttcccatggtgggaaacaacttccctttcccatgctaaactccac 26712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 401
Target Start/End: Original strand, 26982095 - 26982173
Alignment:
Q  323 tgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccac 401  Q
    |||||||||| |||||| || || || |||  |||||||||||||||||||   |||||||||||||||||||| ||||    
T  26982095 tgttctttacttgatctgatggttaaaattagctttcccatggtgggaaacaacttccctttcccatgctaaactccac 26982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 17767546 - 17767610
Alignment:
Q  309 ctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||||||| |||||||||||  | ||||||| ||| | || |||||||||||||||||||||    
T  17767546 ctatgataaaaatatgttctttagttaatctaatggtctaaatctactttcccatggtgggaaac 17767610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 402
Target Start/End: Complemental strand, 4820500 - 4820454
Alignment:
Q  356 tttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||||||| ||||  ||||||||||||||| |||||||||||    
T  4820500 tttcccatggtggaaaacaatttccctttcccatgttaaaccccacc 4820454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 1282312 - 1282268
Alignment:
Q  344 gtcaatatttactttcccatggtgggaaactctttccctttccca 388  Q
    ||||| ||| |||||||||| ||||||||||||||||| ||||||    
T  1282312 gtcaagattaactttcccatagtgggaaactctttcccattccca 1282268  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 26711672 - 26711568
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtc-aatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    |||||| |||| ||||||||| | |||||| ||  ||||||| | ||| || ||||||||||| ||| ||||||||   || |||||||||| |||||||    
T  26711672 tgttgaaagtccatgataaaattgtgttctctaattgatctagtggtctaaaatttactttcctatgttgggaaacaactttcctttcccatactaaacc 26711573  T
Q  398 ccacc 402  Q
    |||||    
T  26711572 ccacc 26711568  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 26981409 - 26981305
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtc-aatatttactttcccatggtgggaaactctttccctttcccatgctaaacc 397  Q
    |||||| |||| ||||||||| | |||||| ||  ||||||| | ||| || ||||||||||| ||| ||||||||   || |||||||||| |||||||    
T  26981409 tgttgaaagtccatgataaaattgtgttctctaattgatctagtggtctaaaatttactttcctatgttgggaaacaactttcctttcccatactaaacc 26981310  T
Q  398 ccacc 402  Q
    |||||    
T  26981309 ccacc 26981305  T

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Target: scaffold0189 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 12804 - 12878
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaac 373  Q
    ||||||| ||||||||||||| |||||||| ||  | ||||||| ||||| ||| ||||||||||||||||||||    
T  12804 tgttgagtgtctatgataaaagtatgttctctagtttatctaatggtcaaaattaactttcccatggtgggaaac 12878  T

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Target: scaffold0041 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 44881 - 44963
Alignment:
Q  296 taatgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||   |||| ||| |||||||||| || |||||||||||    
T  44881 taatgttgagagtccatggtaaaaatatgttctttacttgatctaaggatcaaaattaactttcccatagtaggaaactcttt 44963  T

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Target: scaffold0041; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 44288 - 44209
Alignment:
Q  299 tgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactcttt 378  Q
    ||||||||||||||||||||| | |||||||||  ||||||||  ||||| ||| ||||||| ||  |||||||||||||    
T  44288 tgttgagagtctatgataaaaatgtgttctttatttgatctaagggtcaaaattaactttcctataatgggaaactcttt 44209  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 635
Target Start/End: Original strand, 24793 - 24845
Alignment:
Q  583 gtgagtggcagaggattggagtcccctaagggtgccgacctagtcgggatgtt 635  Q
    ||||| ||||||||||||||||||| | | |||||||||||||||||||||||    
T  24793 gtgagcggcagaggattggagtcccttgaaggtgccgacctagtcgggatgtt 24845  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 25371237 - 25371169
Alignment:
Q  334 tgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaaccccacc 402  Q
    ||||||||| ||||| |  || ||||||||||||||||||   ||| ||||||||||||||||||||||    
T  25371237 tgatctaatggtcaaaaaatattttcccatggtgggaaacaagttcactttcccatgctaaaccccacc 25371169  T

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Target: scaffold2003 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 473 - 579
Alignment:
Q  296 taatgttgagagtctatgataaaactatgttctttacatgatctaatagtcaatatttactttcccatggtgggaaactctttccctttcccatgctaaa 395  Q
    ||||| |||| | ||||||||||| | || ||||||  ||||||| | || || ||||||||| ||||||||||||||   | |||||||||||||| ||    
T  473 taatgctgagggactatgataaaagtgtgctctttatttgatctagtggttaaaatttacttttccatggtgggaaacaactcccctttcccatgcttaa 572  T
Q  396 ccccacc 402  Q
     ||||||    
T  573 tcccacc 579  T

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