View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3631_high_11 (Length: 317)
Name: NF3631_high_11
Description: NF3631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3631_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 25 - 306
Target Start/End: Original strand, 19914841 - 19915122
Alignment:
| Q |
25 |
caaccggaagacaatgttgttaggtcaaagaaggatatactagttcaataactcacattcaactcactataacatttagttgcaagcattttagtaggaa |
124 |
Q |
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| T |
19914841 |
caaccggaagacaatgttgttaggtcaaagaaggatatactagttcaataactcacattcaactcactataacatttagttgcaagcattttagtaggaa |
19914940 |
T |
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| Q |
125 |
tcatttctgaacacaaacgatcgtgatatatcagacaattttattaagttgaataaaaggtatttgtcttatatcgtttttgactttttaatcgttgtct |
224 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19914941 |
tcatttctgaacacaaacgattgtgatatatcagacaattttattaagttgaataaaaggtatttgtcttatatcgtttttgactttttaatcgttgtct |
19915040 |
T |
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| Q |
225 |
cattatatagttaatatgcatatgaaaatatagacgacaatgaaaataatcgtcctctcttacatgcttcaccatcatctct |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
19915041 |
cattatatagttaatatgcatatgaaaatatagacgacaatgaagataatcgtcctctcttacatgcttcaccatcatctct |
19915122 |
T |
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