View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3631_high_8 (Length: 356)
Name: NF3631_high_8
Description: NF3631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3631_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 343
Target Start/End: Complemental strand, 31029094 - 31028768
Alignment:
| Q |
18 |
aaaaaattcctcttgatctctttagtgtttgtatgacttttctccatgctttataaaagaagaaatgaagaggtaaactagtcaaaactaagttaattgg |
117 |
Q |
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| T |
31029094 |
aaaaaattcctcttgatctctttagtgtttgtatgacttttctctatgctttataaaagaagaaatgaagaggtaaactagtcaaaactaagttgattag |
31028995 |
T |
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| Q |
118 |
tattcagcat-cactgtctcccaaagaaatatgctctcctttccgttgacaccaaatctttctttcatcaactccacaatagtttctcaattaattaaaa |
216 |
Q |
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|||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31028994 |
tattcagcatactctgtctcccaaagaaatatgctctcctttccattgacaccaaatctttctttcatcaactccacaatagtttctcaattaattaaaa |
31028895 |
T |
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| Q |
217 |
gtaaaatgatctcgtnnnnnnnnnnnnnttgcatttaagtcatattatttttactgaggggccattatatttatatgtagccgaaaggcctacacgtttg |
316 |
Q |
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||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
31028894 |
gtaaaatgatctcgtaaaaaaataaaaattgcatttaagtcatattatttttaccgaggggacattatatttatatgtagccgaaaggcctacacgtttg |
31028795 |
T |
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| Q |
317 |
catattatatcattcgtgtctccatct |
343 |
Q |
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||||||||||||||||||||||||||| |
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| T |
31028794 |
catattatatcattcgtgtctccatct |
31028768 |
T |
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