View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3632_high_17 (Length: 236)
Name: NF3632_high_17
Description: NF3632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3632_high_17 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 27693873 - 27693656
Alignment:
| Q |
19 |
atccggaagactattgggatatatcttcggagaggtgtggtggtgaggaaaagcaatactattcttattttgttaacggacgtgaagacgtgagtaacat |
118 |
Q |
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| T |
27693873 |
atccggaagactattgggatatatcttcggagaggtgtggtggtgaggaaaagcaatactattcttattttgttaacggacgtgaagacgtgagtaacat |
27693774 |
T |
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| Q |
119 |
agtagagtcatgcagagtggagatgaaggtaattatgagtagctgggatggaaagctgaaatgtaatagcagcaagtgtcgttatccagatgtatacagg |
218 |
Q |
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| T |
27693773 |
agtagagtcatgcagagtggagatgaaggtaattatgagtagctgggatggaaagctgaaatgtaatagcagcaagtgtggttatccagatgtatacagg |
27693674 |
T |
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| Q |
219 |
gagtatgtcaacggaatt |
236 |
Q |
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| T |
27693673 |
gagtatgtcaacggaatt |
27693656 |
T |
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