View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3634_high_7 (Length: 474)
Name: NF3634_high_7
Description: NF3634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3634_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 2 - 459
Target Start/End: Complemental strand, 43924201 - 43923744
Alignment:
| Q |
2 |
catgtgttagtgtcctttctgtgttgaaaccgccatgtgtcggtgtcggataccataccacacacctttgatcagagatgcgttgatcctaaggtagttc |
101 |
Q |
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| T |
43924201 |
catgtgttagtgtcctttctttgttgaaaccgccatgtgtcggtgtcggataccataccacacacctttgatcagagatgcgttgatcctaaggtggttc |
43924102 |
T |
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| Q |
102 |
ggatcatttataaattccaactaaacataattatcttcattaattgnnnnnnnctctcttaattattaggaatcagagtggcttagggttactttacata |
201 |
Q |
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| T |
43924101 |
ggatcatttataaattccaactaaacataattatcttcattaattgtttttttctctcataattattaggaatcagagtggcttagggttactttacata |
43924002 |
T |
|
| Q |
202 |
aatggttggatgatgaatactgtcctgaggaaacaaatgtggagataagcagagttgctgcaaaatcctactacaattctttgatacggaaacaagctga |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
43924001 |
aatggttggatgatgaatactgtcctgaggaaacaaatgtggagataagcagagttgctgcaaaatcctactataattctttgatacggaaacaagctga |
43923902 |
T |
|
| Q |
302 |
tttagctgacattttgttgaatatggcacgtgaattggaaaccatttcttataaggaaagttttcatggggcatacacatctgcaaatgcggctgtaaac |
401 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43923901 |
tttagctgacattttgttgaatatggcacgtgaattggaaaccatttcttataaggaaagttttcatggggcatacacatctgcaaatgcggctgtaaac |
43923802 |
T |
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| Q |
402 |
ctaattgcgcagcggattgaacaattatgccacccaaattaaattccatagctccaca |
459 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43923801 |
ctaattgcgcagcggattgaacaattatgccacccaaattaaattccatagctccaca |
43923744 |
T |
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