View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3635_low_11 (Length: 297)

Name: NF3635_low_11
Description: NF3635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3635_low_11
NF3635_low_11
[»] chr6 (30 HSPs)
chr6 (1-83)||(22746459-22746541)
chr6 (233-288)||(8091184-8091239)
chr6 (237-288)||(21380063-21380114)
chr6 (237-287)||(15546755-15546805)
chr6 (238-288)||(21379940-21379990)
chr6 (235-288)||(4890603-4890656)
chr6 (240-288)||(7808731-7808779)
chr6 (238-288)||(885384-885434)
chr6 (238-288)||(11687142-11687192)
chr6 (239-288)||(11687265-11687314)
chr6 (237-288)||(6433688-6433739)
chr6 (238-288)||(885507-885557)
chr6 (238-288)||(4890479-4890529)
chr6 (238-288)||(14393686-14393736)
chr6 (239-288)||(3368985-3369034)
chr6 (237-286)||(13439693-13439742)
chr6 (239-288)||(20501706-20501755)
chr6 (240-288)||(8091063-8091111)
chr6 (237-288)||(15546630-15546681)
chr6 (241-287)||(18998240-18998286)
chr6 (235-288)||(13172570-13172623)
chr6 (239-288)||(17367064-17367113)
chr6 (240-288)||(7808610-7808658)
chr6 (238-288)||(13439818-13439868)
chr6 (239-277)||(18998117-18998155)
chr6 (238-288)||(29609000-29609050)
chr6 (237-266)||(5416658-5416687)
chr6 (243-288)||(20501828-20501872)
chr6 (243-288)||(29609123-29609168)
chr6 (252-288)||(14393574-14393610)
[»] chr5 (38 HSPs)
chr5 (230-288)||(20476553-20476611)
chr5 (230-288)||(4266104-4266162)
chr5 (237-288)||(15855841-15855892)
chr5 (241-288)||(24397368-24397415)
chr5 (237-288)||(35420610-35420661)
chr5 (237-288)||(35420734-35420785)
chr5 (239-288)||(15855965-15856014)
chr5 (239-288)||(16473077-16473126)
chr5 (236-288)||(4265979-4266031)
chr5 (237-288)||(1138681-1138732)
chr5 (237-288)||(33629343-33629394)
chr5 (238-288)||(1138558-1138608)
chr5 (238-288)||(16472954-16473004)
chr5 (238-287)||(780915-780964)
chr5 (243-288)||(8364752-8364797)
chr5 (237-282)||(17583367-17583412)
chr5 (243-288)||(32623219-32623264)
chr5 (239-287)||(1164919-1164967)
chr5 (236-288)||(13754288-13754340)
chr5 (236-288)||(20476428-20476480)
chr5 (241-288)||(2255584-2255631)
chr5 (229-288)||(21259852-21259911)
chr5 (239-282)||(21591213-21591256)
chr5 (239-282)||(21595330-21595373)
chr5 (237-288)||(43539229-43539280)
chr5 (236-286)||(21259727-21259777)
chr5 (237-287)||(29141803-29141853)
chr5 (235-288)||(33629469-33629522)
chr5 (235-279)||(12744957-12745001)
chr5 (233-264)||(1973824-1973855)
chr5 (230-288)||(10132376-10132434)
chr5 (235-285)||(12808036-12808086)
chr5 (242-288)||(25751573-25751619)
chr5 (234-288)||(35806930-35806984)
chr5 (239-288)||(2268727-2268776)
chr5 (239-288)||(13754413-13754462)
chr5 (239-287)||(2268172-2268220)
chr5 (243-287)||(29141863-29141907)
[»] chr8 (27 HSPs)
chr8 (228-288)||(17426617-17426677)
chr8 (237-288)||(15882323-15882374)
chr8 (239-287)||(24211401-24211449)
chr8 (237-288)||(15882198-15882249)
chr8 (240-287)||(37114239-37114286)
chr8 (241-288)||(40891135-40891182)
chr8 (238-288)||(8210322-8210372)
chr8 (237-287)||(24211276-24211326)
chr8 (238-288)||(24741822-24741872)
chr8 (238-288)||(38629596-38629646)
chr8 (235-288)||(29781081-29781134)
chr8 (239-288)||(33100645-33100694)
chr8 (238-288)||(17426752-17426802)
chr8 (239-288)||(23940927-23940976)
chr8 (236-288)||(12234589-12234641)
chr8 (237-288)||(12234464-12234515)
chr8 (237-288)||(35467292-35467343)
chr8 (237-288)||(38520016-38520067)
chr8 (237-288)||(38520140-38520191)
chr8 (238-288)||(4035740-4035790)
chr8 (234-288)||(29780954-29781008)
chr8 (243-288)||(14834676-14834721)
chr8 (240-288)||(33100767-33100815)
chr8 (237-288)||(23940802-23940853)
chr8 (228-287)||(38515627-38515686)
chr8 (238-288)||(11828725-11828775)
chr8 (252-288)||(4261989-4262025)
[»] chr1 (56 HSPs)
chr1 (232-288)||(5189462-5189518)
chr1 (237-288)||(49285097-49285148)
chr1 (238-288)||(19797103-19797153)
chr1 (238-288)||(27240923-27240973)
chr1 (236-288)||(3607851-3607903)
chr1 (240-288)||(9978174-9978222)
chr1 (228-288)||(19954900-19954960)
chr1 (237-288)||(15324624-15324675)
chr1 (237-288)||(42561417-42561468)
chr1 (237-288)||(47940568-47940619)
chr1 (237-288)||(47940693-47940744)
chr1 (238-288)||(2854654-2854704)
chr1 (238-288)||(4299517-4299567)
chr1 (238-288)||(36880633-36880683)
chr1 (234-288)||(48954209-48954263)
chr1 (238-288)||(48954336-48954386)
chr1 (238-288)||(50627130-50627180)
chr1 (239-288)||(23698624-23698673)
chr1 (239-288)||(25297969-25298018)
chr1 (235-288)||(27241046-27241099)
chr1 (239-288)||(27926374-27926423)
chr1 (240-288)||(1387900-1387948)
chr1 (240-288)||(14387137-14387185)
chr1 (237-288)||(2854530-2854581)
chr1 (237-288)||(19955033-19955084)
chr1 (237-288)||(23698500-23698551)
chr1 (233-284)||(26208551-26208602)
chr1 (233-288)||(27926245-27926300)
chr1 (241-288)||(50162661-50162708)
chr1 (237-288)||(50627253-50627304)
chr1 (237-288)||(51789595-51789646)
chr1 (237-288)||(51789717-51789768)
chr1 (238-288)||(40647240-40647290)
chr1 (238-288)||(42561294-42561344)
chr1 (240-286)||(51276819-51276865)
chr1 (239-288)||(27928420-27928469)
chr1 (240-288)||(19796982-19797030)
chr1 (237-288)||(362479-362530)
chr1 (237-288)||(2125192-2125243)
chr1 (241-288)||(5189591-5189638)
chr1 (241-288)||(14387017-14387064)
chr1 (237-288)||(21930500-21930551)
chr1 (238-288)||(29598459-29598509)
chr1 (239-288)||(9978051-9978100)
chr1 (239-288)||(40647116-40647165)
chr1 (228-288)||(1387769-1387827)
chr1 (241-288)||(15324749-15324796)
chr1 (239-286)||(25297922-25297968)
chr1 (239-288)||(2125070-2125119)
chr1 (232-285)||(6079377-6079430)
chr1 (243-288)||(22339106-22339151)
chr1 (243-288)||(27928302-27928347)
chr1 (238-287)||(50162537-50162586)
chr1 (239-288)||(51276695-51276744)
chr1 (240-288)||(3607730-3607778)
chr1 (236-288)||(36880286-36880338)
[»] chr7 (44 HSPs)
chr7 (235-288)||(33721823-33721876)
chr7 (237-288)||(31231738-31231789)
chr7 (237-288)||(35339276-35339327)
chr7 (237-288)||(38528534-38528585)
chr7 (238-288)||(10936592-10936642)
chr7 (236-286)||(34052403-34052453)
chr7 (239-288)||(24836142-24836191)
chr7 (232-288)||(30259188-30259244)
chr7 (233-288)||(38883215-38883270)
chr7 (234-288)||(20184233-20184287)
chr7 (230-288)||(34052270-34052328)
chr7 (238-288)||(35665632-35665682)
chr7 (239-288)||(31231614-31231663)
chr7 (239-288)||(38883343-38883392)
chr7 (237-288)||(24836018-24836069)
chr7 (240-288)||(35665738-35665786)
chr7 (236-288)||(47237550-47237602)
chr7 (237-284)||(17101652-17101699)
chr7 (237-288)||(20184361-20184412)
chr7 (237-288)||(30594691-30594742)
chr7 (238-288)||(30259065-30259115)
chr7 (239-288)||(10936470-10936519)
chr7 (239-284)||(17101700-17101745)
chr7 (239-288)||(39143828-39143877)
chr7 (236-288)||(30594815-30594867)
chr7 (237-288)||(3953040-3953091)
chr7 (237-288)||(48103366-48103417)
chr7 (237-287)||(9285837-9285887)
chr7 (237-287)||(9289904-9289954)
chr7 (241-287)||(35339401-35339447)
chr7 (239-288)||(12142192-12142241)
chr7 (239-288)||(29277838-29277887)
chr7 (239-287)||(9285714-9285762)
chr7 (239-287)||(9289781-9289829)
chr7 (232-288)||(39617834-39617890)
chr7 (240-287)||(11486865-11486912)
chr7 (238-288)||(25742434-25742484)
chr7 (238-288)||(47237432-47237481)
chr7 (239-288)||(3953164-3953213)
chr7 (240-285)||(39143713-39143758)
chr7 (239-288)||(39617964-39618012)
chr7 (228-288)||(40358237-40358300)
chr7 (239-288)||(45997508-45997557)
chr7 (239-288)||(48103487-48103536)
[»] chr3 (69 HSPs)
chr3 (235-288)||(50099556-50099609)
chr3 (232-288)||(4072396-4072452)
chr3 (237-288)||(21969155-21969206)
chr3 (237-288)||(21991591-21991642)
chr3 (237-288)||(45487797-45487848)
chr3 (238-288)||(21969279-21969329)
chr3 (238-288)||(21991715-21991765)
chr3 (238-288)||(45487921-45487971)
chr3 (238-287)||(32237517-32237566)
chr3 (228-288)||(36657422-36657482)
chr3 (236-288)||(36657555-36657607)
chr3 (237-288)||(10117633-10117684)
chr3 (237-288)||(12789604-12789655)
chr3 (237-288)||(35368547-35368598)
chr3 (238-288)||(3970490-3970540)
chr3 (238-288)||(4072272-4072322)
chr3 (238-288)||(25488463-25488513)
chr3 (238-288)||(25561010-25561060)
chr3 (238-288)||(26906453-26906503)
chr3 (238-288)||(36822759-36822809)
chr3 (238-288)||(39850467-39850517)
chr3 (239-288)||(13078163-13078212)
chr3 (239-288)||(22101287-22101336)
chr3 (239-288)||(36278878-36278927)
chr3 (236-288)||(3970613-3970665)
chr3 (240-288)||(5529892-5529940)
chr3 (240-288)||(10017115-10017163)
chr3 (240-288)||(10254569-10254617)
chr3 (240-288)||(10254691-10254739)
chr3 (236-288)||(25446372-25446423)
chr3 (237-288)||(1476673-1476724)
chr3 (240-287)||(10017232-10017279)
chr3 (237-288)||(10441380-10441431)
chr3 (241-288)||(32237396-32237443)
chr3 (237-288)||(39850342-39850393)
chr3 (241-288)||(43639204-43639251)
chr3 (238-288)||(26906576-26906626)
chr3 (237-287)||(26976840-26976890)
chr3 (238-288)||(36278755-36278805)
chr3 (238-288)||(38125301-38125351)
chr3 (242-284)||(45713029-45713071)
chr3 (243-284)||(8831744-8831785)
chr3 (239-288)||(22176231-22176280)
chr3 (239-288)||(36822882-36822931)
chr3 (240-288)||(8831863-8831911)
chr3 (240-288)||(10117516-10117564)
chr3 (228-288)||(12838066-12838126)
chr3 (236-288)||(43639078-43639130)
chr3 (243-286)||(297541-297584)
chr3 (237-288)||(10441256-10441307)
chr3 (236-287)||(12789729-12789780)
chr3 (237-288)||(25561133-25561184)
chr3 (226-288)||(13078285-13078346)
chr3 (240-286)||(13723989-13724035)
chr3 (243-284)||(1476555-1476596)
chr3 (239-288)||(25488341-25488390)
chr3 (239-288)||(43150480-43150529)
chr3 (237-280)||(46679287-46679330)
chr3 (238-288)||(404043-404093)
chr3 (238-288)||(25446250-25446298)
chr3 (238-288)||(26977812-26977862)
chr3 (238-288)||(35368855-35368905)
chr3 (238-288)||(36329302-36329352)
chr3 (239-273)||(45712903-45712937)
chr3 (243-288)||(26976964-26977009)
chr3 (239-288)||(32362861-32362910)
chr3 (231-288)||(55340285-55340342)
chr3 (239-288)||(55340416-55340465)
chr3 (236-288)||(44611379-44611430)
[»] chr2 (37 HSPs)
chr2 (236-288)||(16705730-16705782)
chr2 (237-288)||(24101830-24101881)
chr2 (238-288)||(34490578-34490628)
chr2 (228-288)||(1924103-1924163)
chr2 (239-287)||(34455885-34455933)
chr2 (239-287)||(45408748-45408796)
chr2 (237-288)||(1923978-1924029)
chr2 (237-288)||(7737187-7737238)
chr2 (238-288)||(9281469-9281519)
chr2 (238-288)||(20892883-20892933)
chr2 (238-288)||(23835875-23835925)
chr2 (227-288)||(16705855-16705916)
chr2 (239-288)||(24101954-24102003)
chr2 (235-288)||(45408621-45408674)
chr2 (237-288)||(3116998-3117049)
chr2 (237-288)||(9933691-9933742)
chr2 (237-288)||(43858556-43858607)
chr2 (238-288)||(3116875-3116925)
chr2 (238-288)||(22269844-22269894)
chr2 (238-288)||(34490455-34490505)
chr2 (239-288)||(2818788-2818837)
chr2 (237-286)||(6605858-6605907)
chr2 (244-288)||(2818671-2818715)
chr2 (240-288)||(10553003-10553051)
chr2 (236-288)||(27920694-27920746)
chr2 (229-288)||(27920563-27920621)
chr2 (238-288)||(43476068-43476118)
chr2 (239-288)||(9281347-9281396)
chr2 (239-288)||(12850664-12850713)
chr2 (239-288)||(22269722-22269771)
chr2 (238-278)||(6605737-6605777)
chr2 (240-288)||(7737065-7737113)
chr2 (236-288)||(20893007-20893058)
chr2 (237-288)||(9933568-9933618)
chr2 (237-288)||(42713775-42713826)
chr2 (237-288)||(42713900-42713951)
chr2 (239-288)||(8111695-8111744)
[»] chr4 (41 HSPs)
chr4 (237-288)||(24915792-24915843)
chr4 (237-288)||(52824237-52824288)
chr4 (239-288)||(530791-530840)
chr4 (235-288)||(1298908-1298961)
chr4 (240-288)||(18417658-18417706)
chr4 (237-288)||(530667-530718)
chr4 (237-288)||(20435262-20435313)
chr4 (233-288)||(21048699-21048754)
chr4 (237-288)||(42274490-42274541)
chr4 (238-288)||(1299034-1299084)
chr4 (238-287)||(18417780-18417829)
chr4 (239-288)||(24969666-24969715)
chr4 (239-288)||(27434732-27434781)
chr4 (240-288)||(4688248-4688296)
chr4 (240-288)||(32318721-32318769)
chr4 (240-288)||(42274615-42274663)
chr4 (228-288)||(55107513-55107573)
chr4 (237-285)||(55107649-55107697)
chr4 (241-288)||(24969543-24969590)
chr4 (237-288)||(43486198-43486249)
chr4 (238-287)||(3422428-3422477)
chr4 (239-288)||(55049400-55049449)
chr4 (237-288)||(4552783-4552834)
chr4 (240-287)||(4688371-4688418)
chr4 (237-288)||(13204499-13204550)
chr4 (239-286)||(28573947-28573994)
chr4 (241-288)||(37525065-37525112)
chr4 (234-288)||(23928689-23928743)
chr4 (238-288)||(28809969-28810019)
chr4 (239-288)||(20435140-20435189)
chr4 (233-288)||(3422551-3422606)
chr4 (237-288)||(4552907-4552958)
chr4 (233-264)||(4894963-4894994)
chr4 (237-288)||(9355551-9355602)
chr4 (233-288)||(13204371-13204426)
chr4 (237-288)||(23928566-23928616)
chr4 (233-288)||(28809840-28809895)
chr4 (241-288)||(36030941-36030988)
chr4 (238-288)||(27434609-27434659)
chr4 (236-288)||(47465106-47465158)
chr4 (238-288)||(52587435-52587482)
[»] scaffold0069 (2 HSPs)
scaffold0069 (236-288)||(26402-26454)
scaffold0069 (229-266)||(26465-26502)
[»] scaffold0122 (2 HSPs)
scaffold0122 (237-288)||(45832-45883)
scaffold0122 (239-288)||(45956-46005)
[»] scaffold0107 (2 HSPs)
scaffold0107 (237-288)||(51061-51112)
scaffold0107 (237-288)||(51185-51236)
[»] scaffold0595 (2 HSPs)
scaffold0595 (235-288)||(5827-5882)
scaffold0595 (238-288)||(5700-5750)
[»] scaffold0188 (2 HSPs)
scaffold0188 (238-288)||(7208-7258)
scaffold0188 (233-288)||(7080-7135)
[»] scaffold0163 (1 HSPs)
scaffold0163 (239-288)||(2062-2111)
[»] scaffold0118 (2 HSPs)
scaffold0118 (240-288)||(14564-14612)
scaffold0118 (237-288)||(14440-14491)
[»] scaffold0653 (2 HSPs)
scaffold0653 (237-287)||(3516-3566)
scaffold0653 (239-287)||(3393-3441)
[»] scaffold0086 (1 HSPs)
scaffold0086 (240-288)||(48248-48296)
[»] scaffold0137 (1 HSPs)
scaffold0137 (241-288)||(10118-10165)
[»] scaffold0018 (1 HSPs)
scaffold0018 (249-288)||(138287-138326)


Alignment Details
Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22746541 - 22746459
Alignment:
Q  1 ccctcccacttgtgttcaacaggtatattatccatcatgatgcactttcttcttcacttcttagatcacttacaaaataaaag 83  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  22746541 ccctcccacttgtgttcaacaggtatattttccatcatgatgcactttcttcttcacttcttagatcactttcaaaagaaaag 22746459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 8091239 - 8091184
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8091239 ttttaaggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaac 8091184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 21380114 - 21380063
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21380114 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 21380063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 15546805 - 15546755
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15546805 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 15546755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 21379940 - 21379990
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21379940 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 21379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 4890656 - 4890603
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  4890656 ttaaggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaac 4890603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 7808779 - 7808731
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7808779 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 7808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 885384 - 885434
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  885384 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 885434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 11687142 - 11687192
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  11687142 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 11687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 11687314 - 11687265
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  11687314 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 11687265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 6433688 - 6433739
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  6433688 aaggagaaaacttaggtataatttcttaggtgcttttcgtatggttcttaac 6433739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 885557 - 885507
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  885557 aggagaaaacttaggtacaattccttaggtgcttttcctatgattcttaac 885507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 4890479 - 4890529
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  4890479 aggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaac 4890529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 14393736 - 14393686
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  14393736 aggagaaaacttaggtataattccttaggtgctttttgtatggttcttaac 14393686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 3368985 - 3369034
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  3368985 ggagaaaacttgagtacaattccttaggtgcttttcgtatggttcttaac 3369034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 13439693 - 13439742
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  13439693 aaggagaaaacttaggtacaattccttaagtacttttcgtatggttctta 13439742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 20501706 - 20501755
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  20501706 ggagaaaacttagttacaattccttaggtgtttttcgtatggttcttaac 20501755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 8091063 - 8091111
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaac 8091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 15546630 - 15546681
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  | |||| ||||||||||||||    
T  15546630 aaggagaaaacttaggtacaattccttagttgttttttgtatggttcttaac 15546681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 18998286 - 18998240
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||    
T  18998286 agaaaatttagctacaattccttaggtgcttttcgtatggttcttaa 18998240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 13172570 - 13172623
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||  |||  | |||||||||||||||||||    
T  13172570 ttaaggagaaaacttaggtacaattctctagatgtttttcgtatggttcttaac 13172623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 17367064 - 17367113
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| |  ||||||||||| ||||||||    
T  17367064 ggagaaaacttaggtacaattccttatgttcttttcgtatgattcttaac 17367113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 7808610 - 7808658
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| | ||||||| ||||| |||||    
T  7808610 gagaaaacttaggtacaattccttaggtgtttttcgtttggtttttaac 7808658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 13439868 - 13439818
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |  ||| | |||||||||||||||||||    
T  13439868 aggagaaaacttaggtacaattacgcaggtgtttttcgtatggttcttaac 13439818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 18998117 - 18998155
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgta 277  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  18998117 ggagaaaacttaggtacaattccttaggtgtttttcgta 18998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 29609000 - 29609050
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||| ||| | ||||||||| |||||||||||    
T  29609000 aggacaaaacttaggtacaattctttaagtgcttttcgtgtggttcttaac 29609050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 266
Target Start/End: Complemental strand, 5416687 - 5416658
Alignment:
Q  237 aaggagaaaacttaggtacaattccttagg 266  Q
    ||||||||||||||||||||||||||||||    
T  5416687 aaggagaaaacttaggtacaattccttagg 5416658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 20501872 - 20501828
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||    
T  20501872 aaaacttag-tacaatttcttaggtgcttttcgtatggttcttaac 20501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 29609168 - 29609123
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| ||||||||||||||  ||||||||||||||| |||||    
T  29609168 aaaacttacgtacaattccttagatgcttttcgtatggtttttaac 29609123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 14393574 - 14393610
Alignment:
Q  252 gtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  14393574 gtacaattccttaggtgcttttcgtatgattcttaac 14393610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 20476611 - 20476553
Alignment:
Q  230 ttattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20476611 ttattttaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 20476553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 4266162 - 4266104
Alignment:
Q  230 ttattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  4266162 ttattttaaggagaaaacttcggtacaattccttaggtgtttttcgtatggttcttaac 4266104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 15855841 - 15855892
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15855841 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 15855892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 24397415 - 24397368
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  24397415 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 24397368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 35420610 - 35420661
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  35420610 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 35420661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 35420785 - 35420734
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  35420785 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 35420734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 15856014 - 15855965
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15856014 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 15855965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 16473126 - 16473077
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16473126 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 16473077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 4265979 - 4266031
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  4265979 taaggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaac 4266031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 1138732 - 1138681
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  1138732 aaggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaac 1138681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 33629343 - 33629394
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  33629343 aaggagaaaacttaggtacaattccttatgtgcttttggtatggttcttaac 33629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 1138558 - 1138608
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||    
T  1138558 aggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaac 1138608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 16472954 - 16473004
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  16472954 aggaaaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 16473004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 780964 - 780915
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  780964 aggaaaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaa 780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 8364797 - 8364752
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaac 8364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 17583412 - 17583367
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggtt 282  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  17583412 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggtt 17583367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 32623219 - 32623264
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| | |||||||||||||||||||    
T  32623219 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 32623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 1164967 - 1164919
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  1164967 ggagaaaatttaggtacaattccttagctgcttttcgtatggttcttaa 1164919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 13754288 - 13754340
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| | | |||||||||| ||||||||    
T  13754288 taaggagaaaacttaggtacaattccttatgtgtttttcgtatgattcttaac 13754340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 20476428 - 20476480
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  20476428 taaggagaaaacttaggtacaattctctagatgcttttcgtatggttcttaac 20476480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 2255631 - 2255584
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  2255631 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaac 2255584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 21259911 - 21259852
Alignment:
Q  229 attattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| || ||||||||| |||||||||||||||||||  |||||| |||||||||||||    
T  21259911 attatatttaggagaaaatttaggtacaattccttaggtacttttcttatggttcttaac 21259852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 21591213 - 21591256
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggtt 282  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  21591213 ggagaaaacttaggtacaattccttaagtgcttttcgtatggtt 21591256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 21595330 - 21595373
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggtt 282  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  21595330 ggagaaaacttaggtacaattccttaagtgcttttcgtatggtt 21595373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 43539280 - 43539229
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| ||||||||||||||||||| | |||||||||||| ||||||    
T  43539280 aaggagaaaatttaggtacaattccttaggtgtttttcgtatggtccttaac 43539229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 21259727 - 21259777
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    ||||||||||||||| ||||||||| ||| | |||||||||||||||||||    
T  21259727 taaggagaaaacttacgtacaattctttatgtgcttttcgtatggttctta 21259777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 29141803 - 29141853
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||||    
T  29141803 aaggagaaaacttagatacaattgcttaggtgtttttcgtatggttcttaa 29141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 33629522 - 33629469
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||||||  | |||||||||| ||||||||    
T  33629522 ttaaggagaaaatttaggtacaattccttagatgtttttcgtatgattcttaac 33629469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 12745001 - 12744957
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatg 279  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||    
T  12745001 ttaaggtgaaaacttaggtacaattccttaggtgtttttcgtatg 12744957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 264
Target Start/End: Complemental strand, 1973855 - 1973824
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattcctta 264  Q
    ||||||||||||||||||||||||||||||||    
T  1973855 ttttaaggagaaaacttaggtacaattcctta 1973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 10132434 - 10132376
Alignment:
Q  230 ttattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| |||| ||||||||| |||||||||||| | | |||| ||||||||||||||    
T  10132434 ttattttcaggaaaaaacttagatacaattccttatgtgttttttgtatggttcttaac 10132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 12808086 - 12808036
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctt 285  Q
    |||||| ||||||||||||||||||||||| | | |||||||||| |||||    
T  12808086 ttaaggtgaaaacttaggtacaattccttaagtgtttttcgtatgattctt 12808036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 25751619 - 25751573
Alignment:
Q  242 gaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||  ||||| ||||||||| |||||||||||    
T  25751619 gaaaacttaggtacaattttttaggtgcttttcgtgtggttcttaac 25751573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 35806930 - 35806984
Alignment:
Q  234 tttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| |||| ||| ||||||||| ||||| ||||||| |||||||||||||    
T  35806930 tttaaggacaaaatttaagtacaattctttaggtgcttttcatatggttcttaac 35806984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 2268776 - 2268727
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||| |||| |||||  |||||| ||||||||||||||    
T  2268776 ggagaaaacttaggtataatttcttagatgctttttgtatggttcttaac 2268727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 13754462 - 13754413
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| ||| |||||||| |||||| | |||||||||||||||||||    
T  13754462 ggagaaaatttatgtacaattacttaggtgtttttcgtatggttcttaac 13754413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 2268172 - 2268220
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||| ||||||||||||||||| | | |||| |||||||||||||    
T  2268172 ggagaaaaattaggtacaattccttaagtgttttttgtatggttcttaa 2268220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 29141907 - 29141863
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||| |||||||||| ||| |||| ||||||||||||||||||||    
T  29141907 aaaaattaggtacaactccataggtgcttttcgtatggttcttaa 29141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 17426617 - 17426677
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  17426617 tattattttaaggagaaaacttaggtacaattcattaggtgcttttcgtatggttcttaac 17426677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 15882374 - 15882323
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15882374 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 15882323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 24211449 - 24211401
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24211449 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 15882198 - 15882249
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15882198 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 15882249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 37114239 - 37114286
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37114239 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 37114286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 40891182 - 40891135
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  40891182 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 40891135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 8210322 - 8210372
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  8210322 aggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaac 8210372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 24211276 - 24211326
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  24211276 aaggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaa 24211326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 24741822 - 24741872
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  24741822 aggaaaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 24741872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 38629646 - 38629596
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  38629646 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 38629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 29781134 - 29781081
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  29781134 ttaaggagaaaacttaggtccaattccttagatgcttttcgtatggttcttaac 29781081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 33100645 - 33100694
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  33100645 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 33100694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 17426802 - 17426752
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  17426802 aggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaac 17426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 23940976 - 23940927
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  23940976 ggagaaaacttagttacaattccttaggtgcttttcgtatggtttttaac 23940927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 12234641 - 12234589
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||| |||||    
T  12234641 taaggagaaaacttaggtacaatttcttagatgcttttcgtatggttattaac 12234589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 12234464 - 12234515
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||| ||||| || || |||||||||||||||||||||    
T  12234464 aaggagaaaacttaggtataattctttgggtgcttttcgtatggttcttaac 12234515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 35467343 - 35467292
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| |||||||| ||||||||||||| | |||||||||||||||||||||    
T  35467343 aaggaaaaaacttacgtacaattccttatgtgcttttcgtatggttcttaac 35467292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 38520016 - 38520067
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| ||||||| ||||||||||  |||||||||||||||||||||    
T  38520016 aaggagaaaatttaggtataattccttagttgcttttcgtatggttcttaac 38520067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 38520191 - 38520140
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | |||||||||||| || |||||    
T  38520191 aaggagaaaacttaggtacaattccttaagtgcttttcgtatgttttttaac 38520140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 4035740 - 4035790
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  4035740 aggagaaaacttaggtacagttcctcaggtgcttttcgtatggtacttaac 4035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 29780954 - 29781008
Alignment:
Q  234 tttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||| |||| ||||||||||||||||||| ||||||||||||||| |||||    
T  29780954 tttatggataaaatttaggtacaattccttaggtgcttttcgtatggtttttaac 29781008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 14834676 - 14834721
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| ||||||||||||| | |||||||||||||||||||||    
T  14834676 aaaacttacgtacaattccttacgtgcttttcgtatggttcttaac 14834721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 33100815 - 33100767
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||||    
T  33100815 gagaaaacttaggtacaatttcttatgtgcttttcgtacggttcttaac 33100767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 23940802 - 23940853
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| ||||||||| |||| | |||||||||||| ||||||||    
T  23940802 aaggagaaaacttcggtacaatttcttaagtgcttttcgtatgattcttaac 23940853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 38515686 - 38515627
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||| ||||| |||||||||||||||||||||||||||  || |||||| ||||| ||||    
T  38515686 tattcttttatggagaaaacttaggtacaattccttagatgcatttcgtgtggtttttaa 38515627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 11828775 - 11828725
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||   ||||||| ||| |||||||||    
T  11828775 aggagaaaacttaggtacaattccttacttgcttttcatatcgttcttaac 11828725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 4261989 - 4262025
Alignment:
Q  252 gtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  4261989 gtacaattctttaggtgcttttcgtatggttcttaac 4262025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 5189462 - 5189518
Alignment:
Q  232 attttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5189462 attttaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 5189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 49285148 - 49285097
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49285148 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 49285097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 19797153 - 19797103
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19797153 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 19797103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 27240923 - 27240973
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27240923 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 27240973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 3607903 - 3607851
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  3607903 taaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 3607851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 9978222 - 9978174
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9978222 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 9978174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 19954900 - 19954960
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  19954900 tattcttttaaggagaaaacttaggtacaattccttatgtgcttttcgtatagttcttaac 19954960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 15324624 - 15324675
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  15324624 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 15324675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 42561468 - 42561417
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  42561468 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 42561417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 47940568 - 47940619
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  47940568 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 47940619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 47940744 - 47940693
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  47940744 aaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 47940693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 2854704 - 2854654
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  2854704 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 2854654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 4299567 - 4299517
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4299567 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 4299517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 36880683 - 36880633
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  36880683 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 36880633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 48954209 - 48954263
Alignment:
Q  234 tttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  48954209 tttaaggagaaaacttaggtacaattccttaggtacttttcatatggttcttaac 48954263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 48954386 - 48954336
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  48954386 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 48954336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 50627130 - 50627180
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  50627130 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 50627180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 23698673 - 23698624
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  23698673 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 23698624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 25298018 - 25297969
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  25298018 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 25297969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 27241099 - 27241046
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  27241099 ttaaggagaaaacttaggtacaattcgttaggtgctttgcgtatggttcttaac 27241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 27926423 - 27926374
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  27926423 ggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaac 27926374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 1387948 - 1387900
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  1387948 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaac 1387900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 14387185 - 14387137
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  14387185 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 14387137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 2854530 - 2854581
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  2854530 aaggagaaaacttaggtacaattccttagatacttttcgtatggttcttaac 2854581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 19955084 - 19955033
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  19955084 aaggagaaaacttaggtacaattccttaggtactttttgtatggttcttaac 19955033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 23698500 - 23698551
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  23698500 aaggagaaaacttaggtacaattccttagatacttttcgtatggttcttaac 23698551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 26208602 - 26208551
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttct 284  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  26208602 ttttaaggagaaaacttatgtataattccttaggtgcttttcgtatggttct 26208551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 27926245 - 27926300
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| |||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  27926245 ttttatggagaaaacttaggtataattccttatgtgcttttcgtatggttcttaac 27926300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 50162708 - 50162661
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  50162708 agaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 50162661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 50627304 - 50627253
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  50627304 aaggagaaaacttaggtacaattccttatatgcttttcgtatggttcttaac 50627253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 51789595 - 51789646
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  51789595 aaggagaaaacttaggtacaattccttaggtgattttcgtatggtttttaac 51789646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 51789768 - 51789717
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  51789768 aaggagaaaacttaggtacaattccttaaatgcttttcgtatggttcttaac 51789717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 40647290 - 40647240
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  40647290 aggagaaaacttaggtacaattccttaggtgcttttcgtatgatttttaac 40647240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 42561294 - 42561344
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  42561294 aggagaaatcttaagtacaattccttaggtgcttttcgtatggttcttaac 42561344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 51276865 - 51276819
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  51276865 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttctta 51276819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 27928469 - 27928420
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  27928469 ggagaaaacttatgtacaattccttaggtgtttttcgtatggttcttaac 27928420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 19796982 - 19797030
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  19796982 gagaaaacttaggtacaatttcttaggtgcttttcgtatggtttttaac 19797030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 362530 - 362479
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| ||||||||||||| ||||| |||||||||||| ||||||||    
T  362530 aaggagaaaatttaggtacaattctttaggtgcttttcgtatgattcttaac 362479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 2125243 - 2125192
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| |||||||||||| |||||| ||||||||||| |||||||||    
T  2125243 aaggagaaaatttaggtacaatttcttaggtgcttttcgtatagttcttaac 2125192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 5189638 - 5189591
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||    
T  5189638 agaaaatttaggtacaattccttagatgcttttcgtatggttcttaac 5189591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 14387017 - 14387064
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||    
T  14387017 agaaaacttaggtacaattccttagatgcatttcgtatggttcttaac 14387064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 21930551 - 21930500
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| |||||||||||| |||||| | |||||||||||||||||||    
T  21930551 aaggagaaaatttaggtacaattacttaggtgtttttcgtatggttcttaac 21930500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 29598509 - 29598459
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||  ||||| ||||||||||||||    
T  29598509 aggagaaaacttaggtacaattcgttaggtactttttgtatggttcttaac 29598459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 9978051 - 9978100
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||||||||    
T  9978051 ggagaaaatttaggtacaattccttatgtgcttttcgtatgattcttaac 9978100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 40647116 - 40647165
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| |||||||||||||  ||||||||| |||||||||||    
T  40647116 ggagaaaacttagttacaattccttagctgcttttcgtgtggttcttaac 40647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 1387769 - 1387827
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||||||||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  1387769 tatttttttaaggagaaaacttac-tacaattccttagt-gcttttcgtatggttcttaac 1387827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 15324796 - 15324749
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||| ||| ||||||||||||| | |||||||||||||||||||||    
T  15324796 agaaaatttatgtacaattccttatgtgcttttcgtatggttcttaac 15324749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 25297922 - 25297968
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  25297922 ggagaaaacttag-tacaattccttaggtgcttttcgtatgattctta 25297968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 2125070 - 2125119
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| |||| ||||||| |||| | |||||||||||||||||||||    
T  2125070 ggagaaaatttagttacaatttcttatgtgcttttcgtatggttcttaac 2125119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 6079377 - 6079430
Alignment:
Q  232 attttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctt 285  Q
    |||||| |||||||||| ||||||||||||||||  | |||||||| |||||||    
T  6079377 attttatggagaaaactcaggtacaattccttagatgtttttcgtacggttctt 6079430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 22339151 - 22339106
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||||    
T  22339151 aaaacttaggtgcaattctttaggtgcttttcatatggttcttaac 22339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 27928302 - 27928347
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||| |||||||||||| | |||||| ||||||||||||||    
T  27928302 aaaacttagatacaattccttatgtgctttttgtatggttcttaac 27928347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 50162537 - 50162586
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||||||||   |||| |||||||| ||||    
T  50162537 aggagaaaacttaggtacaattccttaggtattttttgtatggtttttaa 50162586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 51276695 - 51276744
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| ||||||| |||| | |||| |||||||||||||||||||||    
T  51276695 ggagaaaatttaggtataatttcataggtgcttttcgtatggttcttaac 51276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 3607730 - 3607778
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| ||||||| |||| |||||| |||||| ||||||||||||||    
T  3607730 gagaaaatttaggtagaatttcttaggtgctttttgtatggttcttaac 3607778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 36880286 - 36880338
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||  ||| | | |||||||||||||| ||||    
T  36880286 taaggagaaaacttaggtacaattttttaagtgtttttcgtatggttcctaac 36880338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 33721823 - 33721876
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33721823 ttaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 33721876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 31231789 - 31231738
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31231789 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 31231738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 35339276 - 35339327
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35339276 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 35339327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 38528585 - 38528534
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38528585 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 38528534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 10936642 - 10936592
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10936642 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 10936592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 34052453 - 34052403
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34052453 taaggagaaaacttaggtacaattccttaggtgcttttcgtatggttctta 34052403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 24836191 - 24836142
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24836191 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 24836142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 30259244 - 30259188
Alignment:
Q  232 attttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||||||    
T  30259244 attttaaggagaaaacttaggtacaattccttgggtgctttttgtatggttcttaac 30259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 38883215 - 38883270
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38883215 tttttaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 38883270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 20184233 - 20184287
Alignment:
Q  234 tttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  20184233 tttatggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaac 20184287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 34052270 - 34052328
Alignment:
Q  230 ttattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||  |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  34052270 ttattttttggagaaaacttaggtacatttccttaggtgcttttcgtatggttcttaac 34052328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 35665632 - 35665682
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  35665632 aggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaac 35665682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 31231614 - 31231663
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  31231614 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 31231663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 38883392 - 38883343
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38883392 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 38883343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 24836018 - 24836069
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| |||    
T  24836018 aaggagaaaacttaggtacaattgcttaggtgcttttcgtatggttctnaac 24836069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 35665786 - 35665738
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35665786 gagaaaacttaggtacaattccttaggtgcttttcgtatggtttttaac 35665738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 47237602 - 47237550
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  47237602 taaggagaaaacttaggtacaatttctaaggtgcttttcgtatggttcttaac 47237550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 17101652 - 17101699
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttct 284  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  17101652 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 20184412 - 20184361
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  20184412 aaggagaaaacttaggtacaattccttagctgcttttcgtatgattcttaac 20184361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 30594691 - 30594742
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  30594691 aaggagaaaacttaggtacaattccttaggtgcttttcgcatagttcttaac 30594742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 30259065 - 30259115
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||||    
T  30259065 aggataaaacttaggtacaattccttaggtgcttttcctatggttcttaac 30259115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 10936470 - 10936519
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  10936470 ggagaaaacttatgtacaattccttaggtgcttttcgtacggttcttaac 10936519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 17101745 - 17101700
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttct 284  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  17101745 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 39143877 - 39143828
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  39143877 ggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaac 39143828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30594867 - 30594815
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| |||| |||||||||||||||||||  |||||||||||||||||||||    
T  30594867 taaggggaaagcttaggtacaattccttagatgcttttcgtatggttcttaac 30594815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 3953040 - 3953091
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  3953040 aaggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaac 3953091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 48103366 - 48103417
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||| | |||||||||| ||||||||    
T  48103366 aaggagaaaacttaggtacaatttcttaggtgtttttcgtatgattcttaac 48103417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 9285887 - 9285837
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||| ||||||||||||| |||||  |||||||||||||||||||    
T  9285887 aaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaa 9285837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 9289954 - 9289904
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||| ||||||||||||| |||||  |||||||||||||||||||    
T  9289954 aaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaa 9289904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 35339447 - 35339401
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||    
T  35339447 agaaaacttaggtacaattccttatgtacttttcgtatggttcttaa 35339401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 12142192 - 12142241
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  12142192 ggagaaaacttaggtacaattccttacgtgctttgggtatggttcttaac 12142241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 29277838 - 29277887
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||  ||||| ||||||||||||||    
T  29277838 ggagaaaacttaggtacaattctttaggtactttttgtatggttcttaac 29277887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 9285714 - 9285762
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||| || || |||||| |||||||||||||    
T  9285714 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaa 9285762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 9289781 - 9289829
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||| || || |||||| |||||||||||||    
T  9289781 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaa 9289829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 39617834 - 39617890
Alignment:
Q  232 attttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| |||||||||||||||||||||| |||||  | | |||||||||||||||||    
T  39617834 atttttaggagaaaacttaggtacaatttcttagatgttcttcgtatggttcttaac 39617890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 11486865 - 11486912
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  11486865 gagaaagcttaggtacaatttcttagatgcttttcgtatggttcttaa 11486912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 25742434 - 25742484
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| |||||||| |||||| | ||||| |||||||||||||    
T  25742434 aggagaaaacttatgtacaatttcttaggtgtttttcctatggttcttaac 25742484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 47237432 - 47237481
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||| |||||| |||| ||||||| |||||||||||||    
T  47237432 aggagaaaacttaggtataattcc-taggtgcttttcctatggttcttaac 47237481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 3953213 - 3953164
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| ||||||| ||||||  ||||| ||||||||||||||    
T  3953213 ggagaaaacttagatacaattacttaggtactttttgtatggttcttaac 3953164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 39143713 - 39143758
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttctt 285  Q
    ||||||||||||||||||||| || |  ||||||||||||||||||    
T  39143713 gagaaaacttaggtacaattcattggatgcttttcgtatggttctt 39143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 39618012 - 39617964
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| |||||||| ||||| ||||||||||| |||||||||    
T  39618012 ggagaaaacttag-tacaattctttaggtgcttttcgtatagttcttaac 39617964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 40358300 - 40358237
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaat---tccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||| ||||||||||||||||||||||   |||||||| ||||||| |||| ||||||||    
T  40358300 tattttttgaaggagaaaacttaggtacaattcctccttaggtgcttttcctatgattcttaac 40358237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 45997508 - 45997557
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||| | || | |||||| ||||||||||||||    
T  45997508 ggagaaaacttaggtacaatttcatatgtgctttttgtatggttcttaac 45997557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 48103536 - 48103487
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||  |||||||| ||||| |||||| ||||||||||||||    
T  48103536 ggagaaaacttatctacaattctttaggtgctttttgtatggttcttaac 48103487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 50099609 - 50099556
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50099609 ttaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 50099556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 4072452 - 4072396
Alignment:
Q  232 attttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4072452 attttaaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 4072396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 21969155 - 21969206
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21969155 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 21969206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 21991591 - 21991642
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21991591 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 21991642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 45487797 - 45487848
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45487797 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 45487848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 21969329 - 21969279
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21969329 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 21969279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 21991765 - 21991715
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21991765 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 21991715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 45487971 - 45487921
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45487971 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 45487921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 32237566 - 32237517
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32237566 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 32237517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 36657422 - 36657482
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  36657422 tattattattaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 36657482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 36657607 - 36657555
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  36657607 taaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 36657555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 10117684 - 10117633
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  10117684 aaggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaac 10117633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 12789604 - 12789655
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  12789604 aaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 12789655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 35368547 - 35368598
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  35368547 aaggagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaac 35368598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 3970490 - 3970540
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  3970490 aggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaac 3970540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 4072272 - 4072322
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  4072272 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 4072322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 25488513 - 25488463
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25488513 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 25488463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 25561010 - 25561060
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25561010 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 25561060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 26906453 - 26906503
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  26906453 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 26906503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 36822759 - 36822809
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  36822759 aggagaaaacttaggtacaattccttagctgcttttcgtatggttcttaac 36822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 39850517 - 39850467
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  39850517 aggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaac 39850467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 13078163 - 13078212
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  13078163 ggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaac 13078212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 22101336 - 22101287
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  22101336 ggagaaaacttaggtacaattccttatgagcttttcgtatggttcttaac 22101287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 36278927 - 36278878
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  36278927 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 36278878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 3970665 - 3970613
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  3970665 taaggagaaaacttaggtacaatttcttaggtacttttcgtatggttcttaac 3970613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 5529892 - 5529940
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  5529892 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 5529940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 10017115 - 10017163
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  10017115 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaac 10017163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 10254569 - 10254617
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  10254569 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaac 10254617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 10254739 - 10254691
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  10254739 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaac 10254691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 25446423 - 25446372
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  25446423 taaggagaaaacttag-tacaattccttaggtgcttttcgtatggttcttaac 25446372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 1476724 - 1476673
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| |||||||||||||||||||||||| ||||||| |||||||||||||    
T  1476724 aaggataaaacttaggtacaattccttaggtgcttttcatatggttcttaac 1476673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 10017279 - 10017232
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  10017279 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaa 10017232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 10441431 - 10441380
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  10441431 aaggagaaaacttaggtacaattccttaggtgcttttggtacggttcttaac 10441380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 32237396 - 32237443
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  32237396 agaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 32237443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 39850342 - 39850393
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  39850342 aaggagaaaacttaggtactattccttaggtgtttttcgtatggttcttaac 39850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 43639251 - 43639204
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  43639251 agaaaacttaggtacaattccttaggtgcttttcgtatgattcttaac 43639204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 26906626 - 26906576
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  26906626 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaac 26906576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 26976840 - 26976890
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  26976840 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaa 26976890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 36278755 - 36278805
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  36278755 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaac 36278805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 38125351 - 38125301
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  38125351 aggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaac 38125301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 45713071 - 45713029
Alignment:
Q  242 gaaaacttaggtacaattccttaggcgcttttcgtatggttct 284  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  45713071 gaaaacttaggtacaattccttaggtgcttttcgtatggttct 45713029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 8831744 - 8831785
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttct 284  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8831744 aaaacttaggtacaattccttaggtgcttttcgtatggttct 8831785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 22176280 - 22176231
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  22176280 ggagaaaacttaggtacaattccttatgtgctttttgtatggttcttaac 22176231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 36822931 - 36822882
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  36822931 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaac 36822882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 8831911 - 8831863
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  8831911 gagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaac 8831863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 10117516 - 10117564
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  10117516 gagaaaacttaggtacagttccttaggtgcttttcatatggttcttaac 10117564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 12838066 - 12838126
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||| ||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  12838066 tattttttaaagaagaaaacttatgtacaattccttaggtgctttttgtatggttcttaac 12838126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 43639078 - 43639130
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||| || ||||||||||| |||||||||||| ||||||||    
T  43639078 taaggagaaaacttagttataattccttaggtgcttttcgtatgattcttaac 43639130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 297541 - 297584
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  297541 aaaacttaggtacaattcctttggtgcttttcgtatggttctta 297584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 10441256 - 10441307
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||| ||||||||||||||| |||||| ||||| ||||||||    
T  10441256 aaggagaaaacttaagtacaattccttaggtgcttttggtatgattcttaac 10441307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 12789780 - 12789729
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||| |||| ||||||||||| |||||| |||||||||||||    
T  12789780 taaggagaaaactttggtagaattccttaggtgctttttgtatggttcttaa 12789729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 25561184 - 25561133
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| |||||||||    
T  25561184 aaggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaac 25561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 13078346 - 13078285
Alignment:
Q  226 gttattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||  ||||||||||||||||||||| ||||||  ||||||||||| ||||||||    
T  13078346 gttattattttt-ggagaaaacttaggtacaatttcttaggtacttttcgtatgattcttaac 13078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 13723989 - 13724035
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||    
T  13723989 gagaaaacttaggtacaatttcttaggtgctttttgtatggttctta 13724035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 1476555 - 1476596
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttct 284  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  1476555 aaaacttaggtacaattccttaggtgcttttggtatggttct 1476596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 25488341 - 25488390
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||| |||| ||||||||||||||| ||||||||||| |||||||||    
T  25488341 ggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaac 25488390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 43150480 - 43150529
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| |||||    
T  43150480 ggagaaaacttaggtgcaattcctcaggtgcttttcgtatggtttttaac 43150529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 46679287 - 46679330
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatgg 280  Q
    |||||||||||||||||||||||||||| | ||||| |||||||    
T  46679287 aaggagaaaacttaggtacaattccttaagtgctttgcgtatgg 46679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 404043 - 404093
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| |||||||| |||||| |||||||||||| || |||||    
T  404043 aggagaaaacttacgtacaatttcttaggtgcttttcgtatgatttttaac 404093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 25446250 - 25446298
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  25446250 aggagaaaacttag-tacaattccttagt-gcttttcgtatggttcttaac 25446298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 26977862 - 26977812
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||   |||||| |||||||||||||    
T  26977862 aggagaaaacttaggtacaatttcttagatacttttcatatggttcttaac 26977812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 35368905 - 35368855
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||| | | ||||||||||||| |||||    
T  35368905 aggagaaaacttaggtacaatttcttatgtgtttttcgtatggtttttaac 35368855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 36329352 - 36329302
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||  ||| |||||||| ||||| |||||||||||||||||||||    
T  36329352 aggagaaaaggtagctacaattctttaggtgcttttcgtatggttcttaac 36329302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 45712903 - 45712937
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgctttt 273  Q
    |||||||||||||||||||||||||||| ||||||    
T  45712903 ggagaaaacttaggtacaattccttaggtgctttt 45712937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 26977009 - 26976964
Alignment:
Q  243 aaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||| ||||| | ||||||||||||| |||||    
T  26977009 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaac 26976964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 32362861 - 32362910
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||  |||||||| ||||| | |||||||||||||||||||    
T  32362861 ggagaaaacttaactacaattctttaggtgtttttcgtatggttcttaac 32362910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 55340285 - 55340342
Alignment:
Q  231 tattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||||||||||| |||||||||||| |||| | | |||||||||| ||||||||    
T  55340285 tattgtaaggagaaaatttaggtacaatttcttatgtgtttttcgtatgattcttaac 55340342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 55340465 - 55340416
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| ||||||||||||||   ||||| |||||||||||||    
T  55340465 ggagaaaacttagatacaattccttaggtatttttcatatggttcttaac 55340416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 44611379 - 44611430
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||| ||||||||||||||  ||||| |||| |||||||||    
T  44611379 taaggagaaaacttag-tacaattccttaggtactttttgtatagttcttaac 44611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 16705730 - 16705782
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16705730 taaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 16705782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 24101830 - 24101881
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24101830 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 24101881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 34490628 - 34490578
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34490628 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 34490578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 1924163 - 1924103
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  1924163 tattttttttaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 1924103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 34455885 - 34455933
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34455885 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 34455933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 45408796 - 45408748
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45408796 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 45408748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 1923978 - 1924029
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  1923978 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 1924029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 7737238 - 7737187
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  7737238 aaggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaac 7737187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 9281519 - 9281469
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  9281519 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 9281469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 20892883 - 20892933
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  20892883 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 20892933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 23835875 - 23835925
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  23835875 aggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaac 23835925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 16705916 - 16705855
Alignment:
Q  227 ttattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||| || |||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  16705916 ttattattatatggagaaaatttaggtacaattccttaggtgcttttcgtatggtttttaac 16705855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 24102003 - 24101954
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  24102003 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaac 24101954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 45408621 - 45408674
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  45408621 ttaaggagaaaacttaggtacaattccttaggtgttttttgtatggttcttaac 45408674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 3117049 - 3116998
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  3117049 aaggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaac 3116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 9933742 - 9933691
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  9933742 aaggagaaaatttaggtacaatttcttaggtgcttttcgtatggttcttaac 9933691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 43858607 - 43858556
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  43858607 aaggagaaaatttaggtacaattccttaggtacttttcgtatggttcttaac 43858556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 3116875 - 3116925
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||    
T  3116875 aggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaac 3116925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 22269894 - 22269844
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  22269894 aggagaaaacttacgtacaattccttagatgcttttcgtatggttcttaac 22269844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 34490455 - 34490505
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  34490455 aggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaac 34490505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 2818837 - 2818788
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  2818837 ggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaac 2818788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 6605907 - 6605858
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  6605907 aaggagaaaacttaggtacaattctttaggtgctttttgtatggttctta 6605858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 2818671 - 2818715
Alignment:
Q  244 aaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  2818671 aaacttaggtacaattccttaggtgcttttcgtatgattcttaac 2818715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 10553051 - 10553003
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  10553051 gagaaaacttaggtacaattccttaggtgtttttcgtatgattcttaac 10553003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27920746 - 27920694
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  27920746 taaggagaaaacttaggtacaattttttagctgcttttcgtatggttcttaac 27920694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 27920563 - 27920621
Alignment:
Q  229 attattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| ||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  27920563 attatcttaaggagaaaacttag-tacaatttcttaggtgcttttcgtatgggtcttaac 27920621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 43476118 - 43476068
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||| ||||||| ||||||||||| | |||||||||||||||||||    
T  43476118 aggagaaaatttaggtataattccttaggtgtttttcgtatggttcttaac 43476068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 9281347 - 9281396
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||| ||||||||||||||||  |||||| |||||||||||||    
T  9281347 ggagaaaactttggtacaattccttaggtacttttcatatggttcttaac 9281396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 12850713 - 12850664
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||| |||||||| ||  |||||||||||||||||||||    
T  12850713 ggagaaaacttaggtccaattcctcagatgcttttcgtatggttcttaac 12850664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 22269722 - 22269771
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | |||||||||| || |||||    
T  22269722 ggagaaaacttaggtacaattccttaggtgtttttcgtatgatttttaac 22269771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 6605737 - 6605777
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtat 278  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  6605737 aggagaaaacttaggtacaattccttatgtgcttttcgtat 6605777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 7737065 - 7737113
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  7737065 gagaaaacttaggtacaatttcttaggtgcttttggtatgattcttaac 7737113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 20893058 - 20893007
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||| || ||||||||||| |||||||||||| ||||||||    
T  20893058 taaggagaaaacttag-tataattccttaggtgcttttcgtatgattcttaac 20893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 9933568 - 9933618
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| ||| | ||||||| |||||||||||||    
T  9933568 aaggagaaaacttaggtacaattcatta-gtgcttttcctatggttcttaac 9933618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 42713775 - 42713826
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||| |||| || ||||||||||| | |||||||||||||||||||    
T  42713775 aaggagaaaatttagatataattccttaggtgtttttcgtatggttcttaac 42713826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 42713951 - 42713900
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||| | |||||||| ||| ||||||||    
T  42713951 aaggagaaaacttaggtacaatttcttaagtgcttttcgcatgattcttaac 42713900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 8111744 - 8111695
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||| ||||||| ||||||  ||||| ||||||||||||||    
T  8111744 ggagaaaacttagttacaatttcttaggtcctttttgtatggttcttaac 8111695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 24915792 - 24915843
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24915792 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 24915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 52824237 - 52824288
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52824237 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 52824288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 530840 - 530791
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  530840 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 1298908 - 1298961
Alignment:
Q  235 ttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1298908 ttaaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 1298961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 18417658 - 18417706
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18417658 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaac 18417706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 530667 - 530718
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  530667 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 530718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 20435313 - 20435262
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20435313 aaggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaac 20435262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 21048699 - 21048754
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  21048699 ttttaaggagaaaacttaggtacaattcgttagatgcttttcgtatggttcttaac 21048754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 42274490 - 42274541
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42274490 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaac 42274541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 1299084 - 1299034
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  1299084 aggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaac 1299034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 18417829 - 18417780
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  18417829 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaa 18417780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 24969715 - 24969666
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  24969715 ggagaaaacttaggtacaattccttaggtgcttttcgtatagttcttaac 24969666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 27434781 - 27434732
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  27434781 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaac 27434732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 4688248 - 4688296
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  4688248 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaac 4688296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 32318721 - 32318769
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  32318721 gagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaac 32318769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 42274663 - 42274615
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  42274663 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaac 42274615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 55107513 - 55107573
Alignment:
Q  228 tattattttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  55107513 tatttttttatggagaaaacttaggtacaattccttatgtgcttttcatatggttcttaac 55107573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 55107697 - 55107649
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttctt 285  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  55107697 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttctt 55107649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 24969543 - 24969590
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  24969543 agaaaacttaggtacaattctttaggtgcttttcgtatggttcttaac 24969590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 43486198 - 43486249
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  43486198 aaggagaaaacttaggtacaattccttaggtacttttcctatggttcttaac 43486249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 3422428 - 3422477
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  3422428 aggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaa 3422477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 55049400 - 55049449
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  55049400 ggagaaaacttatgtacaattccttaggtgcttttcgtatagttcttaac 55049449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 4552783 - 4552834
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||| |||||    
T  4552783 aaggagaaaacttaggtacaattccttaagtgcttttcatatggtttttaac 4552834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 4688418 - 4688371
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||    
T  4688418 gagaaaacttaggtacaattccttagatgattttcgtatggttcttaa 4688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 13204550 - 13204499
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  13204550 aaggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaac 13204499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 28573947 - 28573994
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttctta 286  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  28573947 ggagaaaacttaggtacaattacttaggtgcttttcgcatggttctta 28573994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 37525112 - 37525065
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  37525112 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaac 37525065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 23928743 - 23928689
Alignment:
Q  234 tttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||| ||||||||||||||| ||||| |||||| ||||||||    
T  23928743 tttatggagaaaacttatgtacaattccttaggtgctttgcgtatgattcttaac 23928689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 28810019 - 28809969
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||||  |||||| ||||||||||||||    
T  28810019 aggagaaaacttaggtacaatttcttagctgcttttggtatggttcttaac 28809969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 20435140 - 20435189
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||  |||||||||||||  |||||||||||||||||||||    
T  20435140 ggagaaaacttatatacaattccttagatgcttttcgtatggttcttaac 20435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 3422606 - 3422551
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||| |||||||||||||||||| ||||| | ||||||||||||| |||||    
T  3422606 tttttaggacaaaacttaggtacaattctttaggtgtttttcgtatggtttttaac 3422551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 4552958 - 4552907
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||   |||||  ||||||||||||||    
T  4552958 aaggagaaaacttaggtacaattccttatatgctttctgtatggttcttaac 4552907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 264
Target Start/End: Original strand, 4894963 - 4894994
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattcctta 264  Q
    ||||||||||||||||||||||||||||||||    
T  4894963 ttttaaggagaaaacttaggtacaattcctta 4894994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 9355551 - 9355602
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||| |||||||  ||||||||||||||| ||||||| |||||||||||||    
T  9355551 aaggaaaaaacttccgtacaattccttaggtgcttttcatatggttcttaac 9355602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 13204371 - 13204426
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||| ||||||| ||||||  ||||| ||||||||||||||    
T  13204371 tttttaggagaaaacttagatacaattacttaggtactttttgtatggttcttaac 13204426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 23928566 - 23928616
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| | | |||||||||| ||||||||    
T  23928566 aaggagaaaacttaggtacaattcctta-gtgtttttcgtatgattcttaac 23928616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 28809840 - 28809895
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| |||||||||||||||||||||| |||||| |||||| |||| ||| |||||    
T  28809840 tttttaggagaaaacttaggtacaatttcttaggtgcttttggtattgtttttaac 28809895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 36030941 - 36030988
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||| ||||||||||||||||| | |||||||||||| ||||||||    
T  36030941 agaaaagttaggtacaattccttacgtgcttttcgtatgtttcttaac 36030988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 27434609 - 27434659
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||| |||| | |||||| |||| |||||||||    
T  27434609 aggagaaaacttaggtacaatttcttatgtgctttttgtatagttcttaac 27434659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 47465158 - 47465106
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||| |||||||||||||||||| ||||| ||||||| |||| || |||||    
T  47465158 taaggacaaaacttaggtacaattctttaggtgcttttcatatgatttttaac 47465106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 52587482 - 52587435
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||   || |||||| |||||||||||||||||||||    
T  52587482 aggagaaaacttaggta---ttacttaggtgcttttcgtatggttcttaac 52587435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 26402 - 26454
Alignment:
Q  236 taaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26402 taaggagaaaacttaggtacaattccttaggtgcttttcgtatggttattaac 26454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 26502 - 26465
Alignment:
Q  229 attattttaaggagaaaacttaggtacaattccttagg 266  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  26502 attatttaaaggagaaaacttaggtacaattccttagg 26465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 45832 - 45883
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  45832 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaac 45883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 46005 - 45956
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  46005 ggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaac 45956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 51061 - 51112
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  51061 aaggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaac 51112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 51236 - 51185
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  51236 aaggagaaaacttaggtacaattccttaggtacttttcatatggttcttaac 51185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 5882 - 5827
Alignment:
Q  235 ttaaggagaaaacttaggtacaatt--ccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  5882 ttaaggagaaaacttaggtacaattttccttaggtgcttttcgtatggttcttaac 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 5700 - 5750
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  5700 aggagaaaactaaggtacaattctttaggtgcttttcgtatggttcttaac 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 7258 - 7208
Alignment:
Q  238 aggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  7258 aggagaaaatttaggtacgattccttaggtgcttttcgtatggttcttaac 7208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 7080 - 7135
Alignment:
Q  233 ttttaaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||| ||||||||| ||||||||||||||||||| | |||||||||| ||||||||    
T  7080 tttttaggagaaaatttaggtacaattccttaggtgtttttcgtatgattcttaac 7135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 2111 - 2062
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  2111 ggagaaaacttaggtacaattccttaggtgctttttatatggttcttaac 2062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 14612 - 14564
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||    
T  14612 gagaaaacttaggtacaattccttgggtgcttttcgtatcgttcttaac 14564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 14440 - 14491
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    ||||||||||||||||||||||| |||||| | ||||| |||||| ||||||    
T  14440 aaggagaaaacttaggtacaatttcttaggtgtttttcctatggtacttaac 14491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 3566 - 3516
Alignment:
Q  237 aaggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||| ||||||||||||| |||||  |||||||||||||||||||    
T  3566 aaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaa 3516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 3393 - 3441
Alignment:
Q  239 ggagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaa 287  Q
    |||||||||||||||||||||| || || |||||| |||||||||||||    
T  3393 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaa 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 48296 - 48248
Alignment:
Q  240 gagaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||| |||||||||||||  ||||||||||| |||||||||    
T  48296 gagaaaacttagatacaattccttagatgcttttcgtatagttcttaac 48248  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 10118 - 10165
Alignment:
Q  241 agaaaacttaggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||| ||||||||||| | ||| |||||||||||||||    
T  10118 agaaaacttaggtataattccttaggtgttttgcgtatggttcttaac 10165  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 138287 - 138326
Alignment:
Q  249 taggtacaattccttaggcgcttttcgtatggttcttaac 288  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  138287 taggtacaattccttaggagcttttcgtatgattcttaac 138326  T

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