View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3636_low_11 (Length: 455)
Name: NF3636_low_11
Description: NF3636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3636_low_11 |
 | |
|
| [»] scaffold0305 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 155; Significance: 4e-82; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 113 - 386
Target Start/End: Original strand, 36526185 - 36526459
Alignment:
| Q |
113 |
ggacagaaacaaacttaactcatttcaattcgaatagtaattgtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccc |
212 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| ||| ||| ||||||||||||||||||| |||| ||||| | | ||| |||||||||||||| ||||| |
|
|
| T |
36526185 |
ggacagaaacaaatttaactcatttcatttctaatggtagttgtaatacaagatgacatataatcatgaactcgggaactagcataagataatgacgccc |
36526284 |
T |
|
| Q |
213 |
tagctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatgattcccaagtgaagttttgcaagtattcataatcgc |
311 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||| ||||||| ||||||||||||||||||||| | |||||| |
|
|
| T |
36526285 |
gagctaacaagtgggcaacattatttgtttgtctcctaatgaaacttatcttaaagttttgatgattcataagtgaagttttgcaagtattgagaatcgc |
36526384 |
T |
|
| Q |
312 |
gccaaacatgaaattggtgctgaagttgttagaaatgccgtcaaccacttatttgcaattaagttcgatagacac |
386 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
36526385 |
gccaaacatggaattggtgctgaagttgctagagatgccgtcaaccacttgcttgcaatcaagttcgatagacac |
36526459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 147 - 386
Target Start/End: Original strand, 37923557 - 37923797
Alignment:
| Q |
147 |
tagtaattgtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtct |
246 |
Q |
| |
|
||||| || |||||||||||| ||| |||| |||| ||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
37923557 |
tagtagttttaatacaagatggcatataatcatgatcttgggaactagcataagataatgacgccctaactaacaagtgggcaacattatttgtttgtct |
37923656 |
T |
|
| Q |
247 |
cttaataaaacttatcttaaa-ttttaatgattcccaagtgaagttttgcaagtattcataatcgcgccaaacatgaaattggtgctgaagttgttagaa |
345 |
Q |
| |
|
| |||| |||||||||||||| |||| ||||||| ||||||| |||||||||||||| ||| ||||| |||||| |||||||||||| ||| | || |
|
|
| T |
37923657 |
cctaatgaaacttatcttaaagttttgatgattcataagtgaaactttgcaagtattcagaattgcgccgaacatggaattggtgctgagattgcttgag |
37923756 |
T |
|
| Q |
346 |
atgccgtcaaccacttatttgcaattaagttcgatagacac |
386 |
Q |
| |
|
||||| |||||||||| ||||||| |||||| |||||||| |
|
|
| T |
37923757 |
atgccatcaaccacttgcttgcaatcaagttctatagacac |
37923797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 37872158 - 37872076
Alignment:
| Q |
216 |
ctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatgattcccaagtgaagttttgcaa |
297 |
Q |
| |
|
|||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| |||| || |||| |||||||| ||||||| |
|
|
| T |
37872158 |
ctaataagtgggaaacattatttgtttgtctcctaataaaacttatcttaaagttttgattattcagaagtgaagctttgcaa |
37872076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 8237399 - 8237345
Alignment:
| Q |
211 |
cctagctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa |
267 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| || |||| |||||||||||||| |
|
|
| T |
8237399 |
cctagctaacaagtcggcaatattatttgcttg--tcctaatgaaacttatcttaaa |
8237345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 146; Significance: 1e-76; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 262 - 447
Target Start/End: Complemental strand, 4430823 - 4430638
Alignment:
| Q |
262 |
cttaaattttaatgattcccaagtgaagttttgcaagtattcataatcgcgccaaacatgaaattggtgctgaagttgttagaaatgccgtcaaccactt |
361 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4430823 |
cttaaattttgatgattcacaagtgaagttttgcaagtattcataatcgcgccaaacatgaaattggtgctgaagttgctagaaatgccgtcaaccactt |
4430724 |
T |
|
| Q |
362 |
atttgcaattaagttcgatagacactttgaaaatcctcacagtatcaagtcatattatcgcttattttagaccgcctgcctatgct |
447 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||| |
|
|
| T |
4430723 |
acttgcaattcagttcgatagacactttgaaaatcctcatagtatcaagccatattatcgcttattttagaccttctgcttatgct |
4430638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 20 - 270
Target Start/End: Complemental strand, 4431252 - 4431008
Alignment:
| Q |
20 |
tgaccaacaaaggtaagataaataaggttcgcgataatcctaaataagcatcaaaatatactattttaagttaaaaccnnnnnnnnnnnnnnnggacaga |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| |
|
|
| T |
4431252 |
tgaccaacaaaggtaagataaataaggttcgcgataatcctaaataagcattaaaatatactattttaagttcaaactttttttttga------gacaga |
4431159 |
T |
|
| Q |
120 |
aacaaacttaactcatttcaattcgaatagtaattgtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagctaa |
219 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4431158 |
aacaaacttaactcatttcaattctaataataattgtaatacaagatggcatgcaaccatgaatttgagaattagcataagataattccgccctagctaa |
4431059 |
T |
|
| Q |
220 |
caagtgggcaacattatttgcttgtctcttaataaaacttatcttaaattt |
270 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
4431058 |
caagtgggaaacattatttgcttctctcctaataaaacttatcttaaattt |
4431008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 386
Target Start/End: Complemental strand, 23270237 - 23269965
Alignment:
| Q |
114 |
gacagaaacaaacttaactcatttcaattcgaatagtaattgtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccct |
213 |
Q |
| |
|
|||||||||||| |||| |||||||| | ||||| | ||||||||||||||| ||| |||| ||||| ||| ||| |||||||||||||| | |||| |
|
|
| T |
23270237 |
gacagaaacaaagttaattcatttcactattaatagcatttgtaatacaagatggcatataatcatgaacttgggaactagcataagataatgactccct |
23270138 |
T |
|
| Q |
214 |
agctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatgattcccaagtgaagttttgcaagtattcataatcgcg |
312 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||| |||||||||||||| |||| ||||||| |||||||| ||||||||| |||| ||| ||| |
|
|
| T |
23270137 |
agctaacaagtgagcaacattatttgcttgtcttctaatgaaacttatcttaaagttttgatgattcataagtgaagctttgcaagtgttcagaatagcg |
23270038 |
T |
|
| Q |
313 |
ccaaacatgaaattggtgctgaagttgttagaaatgccgtcaaccacttatttgcaattaagttcgatagacac |
386 |
Q |
| |
|
| ||| || | |||||| ||| ||| |||| ||| ||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
23270037 |
tcgaacgtggatttggtgttgagattgctagagatgtcgtcaacca-ttgcttgcaatcaagttcgatagacac |
23269965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 356
Target Start/End: Complemental strand, 14965065 - 14964904
Alignment:
| Q |
196 |
ataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatgattcccaagtgaagttttg |
294 |
Q |
| |
|
|||||||||| |||||||| |||| ||||||||||||||||||| ||||||||| || |||||||||||||| |||| ||||||| || | || ||||| |
|
|
| T |
14965065 |
ataagataatggcgccctaactaataagtgggcaacattatttgattgtctcttgatgaaacttatcttaaagttttgatgattcataaattaaattttg |
14964966 |
T |
|
| Q |
295 |
caagtattcataatcgcgccaaacatgaaattggtgctgaagttgttagaaatgccgtcaac |
356 |
Q |
| |
|
||||| || | |||| || || || |||||||||||||| |||||||| ||| ||||||| |
|
|
| T |
14964965 |
caagtgtttaaaatctcgttgaatataaaattggtgctgaaattgttagagatgtcgtcaac |
14964904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 26917487 - 26917413
Alignment:
| Q |
193 |
agcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa |
267 |
Q |
| |
|
||||||||||||| |||||| |||| | ||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
26917487 |
agcataagataatgacgcccttgctagtagatgggcaacactatttgcttgtctcctaataaaacttatcttaaa |
26917413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 123 - 383
Target Start/End: Original strand, 29468266 - 29468527
Alignment:
| Q |
123 |
aaacttaactcatttcaattcgaatagtaattgtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagctaacaa |
222 |
Q |
| |
|
||||| ||||||||||| | ||||||| |||||||||||||||||||||||| ||||| ||||||| |||||||| ||||| | |||||||||||| |
|
|
| T |
29468266 |
aaactcaactcatttcattaataatagtagttgtaatacaagatgacatgtaatcatgaacttgagaactagcataacataatgacatcctagctaacaa |
29468365 |
T |
|
| Q |
223 |
gtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatgattcccaagtgaagttttgcaagtattcataatcgcgccaaacatg |
321 |
Q |
| |
|
|| ||||||||||||| ||||||| |||| |||||||||||||| |||| ||||||| |||||||| ||||||| |||||| || ||||| |||||| |
|
|
| T |
29468366 |
gtatgcaacattatttgtttgtctcataatgaaacttatcttaaagttttgatgattcataagtgaagctttgcaaatattcaggattgcgccgaacatg |
29468465 |
T |
|
| Q |
322 |
aaattggtgctgaagttgttagaaatgccgtcaaccacttatttgcaattaagttcgataga |
383 |
Q |
| |
|
| ||||||| |||||| |||| |||| ||||| |||| ||||||| |||||||||||| |
|
|
| T |
29468466 |
gacctggtgctaaagttgctagagatgcaatcaactacttgcttgcaatcaagttcgataga |
29468527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 155 - 386
Target Start/End: Complemental strand, 9252577 - 9252345
Alignment:
| Q |
155 |
gtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataa |
254 |
Q |
| |
|
|||||| |||||||||| |||| || || |||||| ||| |||||||||| || || |||||||| |||| ||||||||| | |||||| ||||| | |
|
|
| T |
9252577 |
gtaatataagatgacatataatcattaacatgagaactaggataagataataacgtccaggctaacaaatgggtaacattattcgtttgtcttttaatga |
9252478 |
T |
|
| Q |
255 |
aacttatcttaaa-ttttaatgattcccaagtgaagttttgcaagtattcataatcgcgccaaacatgaaattggtgctgaagttgttagaaatgccgtc |
353 |
Q |
| |
|
||||||| ||||| |||| ||||||| |||||||| ||||| | ||||| ||| |||| ||||||||||||||||| | ||| |||| |||||||| |
|
|
| T |
9252477 |
aacttatgttaaagttttgatgattcaaaagtgaagctttgccaccattcagaatagcgctgaacatgaaattggtgcttagattgctagagatgccgtc |
9252378 |
T |
|
| Q |
354 |
aaccacttatttgcaattaagttcgatagacac |
386 |
Q |
| |
|
|||||||| || |||| ||||| ||||||||| |
|
|
| T |
9252377 |
aaccacttgcttacaatcaagtttgatagacac |
9252345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 37491013 - 37490893
Alignment:
| Q |
178 |
atgaatttgagaattagcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatga |
276 |
Q |
| |
|
||||| |||| ||||||||| ||||||| || |||||||||||||||| ||||||||||| ||||||| |||| |||||||||| ||| |||| |||| |
|
|
| T |
37491013 |
atgaacttgaaaattagcatgagataatgacgtcctagctaacaagtggacaacattatttacttgtcttctaatgaaacttatctgaaagttttgatga |
37490914 |
T |
|
| Q |
277 |
ttcccaagtgaagttttgcaa |
297 |
Q |
| |
|
||| ||||||| ||||||| |
|
|
| T |
37490913 |
ttcagtagtgaagctttgcaa |
37490893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 8295173 - 8295133
Alignment:
| Q |
227 |
gcaacattatttgcttgtctcttaataaaacttatcttaaa |
267 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
8295173 |
gcaacactatttatttgtctcttaataaaacttatcttaaa |
8295133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 5461048 - 5460937
Alignment:
| Q |
156 |
taatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataaa |
255 |
Q |
| |
|
|||||||||||| ||| | || ||||||||||| | |||||||||||||| | ||||||||||||| |||||| |||||||||||||| |||| || |
|
|
| T |
5461048 |
taatacaagatggcatatgatcatgaatttgaggactagcataagataatgatgttctagctaacaagtcagcaacaatatttgcttgtctcctaatgaa |
5460949 |
T |
|
| Q |
256 |
acttatcttaaa |
267 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5460948 |
acttatcttaaa |
5460937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 29443918 - 29443791
Alignment:
| Q |
119 |
aaacaaacttaactcatttcaattcgaatagtaattgtaatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagcta |
218 |
Q |
| |
|
||||||||| ||||||||||| | || |||||| ||||||||| ||||||| |||| ||||| |||||| | ||||||||||| ||||| |||| |
|
|
| T |
29443918 |
aaacaaactcaactcatttcattaataacagtaatcgtaatacaatatgacatataatcatgaacatgagaacaaacataagataataatgcccttgcta |
29443819 |
T |
|
| Q |
219 |
acaagtgggcaacattatttgcttgtct |
246 |
Q |
| |
|
||||||| ||| |||||||||||||| |
|
|
| T |
29443818 |
acaagtgaacaaatttatttgcttgtct |
29443791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 28284031 - 28283936
Alignment:
| Q |
195 |
cataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataaaacttatcttaaa-ttttaatgattcccaagtgaag |
289 |
Q |
| |
|
||||||||||| | |||| |||||||||| || ||||||||| ||||||| |||| |||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
28284031 |
cataagataatgacaccctgactaacaagtgaacatcattatttgtttgtctcctaatgaaacttatcttaaagttttgatgattcagaagtgaag |
28283936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 43000413 - 43000524
Alignment:
| Q |
156 |
taatacaagatgacatgtaattatgaatttgagaattagcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtctcttaataaa |
255 |
Q |
| |
|
|||| ||||||||||| |||| ||||| ||| ||||||||||||||||| | || |||| ||||| || | || ||| |||||||||||| ||||||| |
|
|
| T |
43000413 |
taatgcaagatgacatataatcatgaacttggaaattagcataagataatgacaccttagcaaacaaatgagtaatattgtttgcttgtctcctaataaa |
43000512 |
T |
|
| Q |
256 |
acttatcttaaa |
267 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
43000513 |
acttatattaaa |
43000524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 43381836 - 43381796
Alignment:
| Q |
349 |
ccgtcaaccacttatttgcaattaagttcgatagacacttt |
389 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
43381836 |
ccgtcaaccacttgcttgcaatcaagttcgatagacacttt |
43381796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0305 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0305
Description:
Target: scaffold0305; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 386
Target Start/End: Original strand, 18648 - 18819
Alignment:
| Q |
215 |
gctaacaagtgggcaacattatttgcttgtctcttaataaaacttatctt-aaattttaatgattcccaagtgaagttttgcaagtattcataatcgcgc |
313 |
Q |
| |
|
|||||||||||||||| ||||||| || | ||||||| |||||| |||| ||||||| ||||||| |||||||| ||||||| ||||| ||| || |
|
|
| T |
18648 |
gctaacaagtgggcaaaattatttctttttttcttaatgaaacttgtcttcaaattttgatgattcagaagtgaagctttgcaaccattcaaaatagc-a |
18746 |
T |
|
| Q |
314 |
caaacatgaaattggtgctgaagttgttagaaatgccgtcaaccacttatttgcaattaagttcgatagacac |
386 |
Q |
| |
|
|||| || |||||||| ||| || |||| ||| |||||||||||| ||| |||| |||||| |||||||| |
|
|
| T |
18747 |
taaacgtggaattggtgttgagatttctagatatgtcgtcaaccacttgtttacaatcaagttcaatagacac |
18819 |
T |
|
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Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 9738624 - 9738691
Alignment:
| Q |
178 |
atgaatttgagaattagcataagataattgcgccctagctaacaagtgggcaacattatttgcttgtc |
245 |
Q |
| |
|
||||||||||||| || ||||||||||| ||| ||||||||||| || ||||||||||||| ||||| |
|
|
| T |
9738624 |
atgaatttgagaactaacataagataatgacgctctagctaacaaatgagcaacattatttggttgtc |
9738691 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 47798396 - 47798432
Alignment:
| Q |
231 |
cattatttgcttgtctcttaataaaacttatcttaaa |
267 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
47798396 |
cattatttatttgtctcttaataaaacttatcttaaa |
47798432 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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