View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3636_low_39 (Length: 226)

Name: NF3636_low_39
Description: NF3636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3636_low_39
NF3636_low_39
[»] chr8 (59 HSPs)
chr8 (112-226)||(30476154-30476265)
chr8 (112-225)||(17946766-17946876)
chr8 (112-224)||(16097389-16097498)
chr8 (112-222)||(17852570-17852678)
chr8 (112-226)||(18957182-18957293)
chr8 (112-226)||(44257836-44257947)
chr8 (112-226)||(15881415-15881526)
chr8 (112-226)||(38059425-38059537)
chr8 (112-226)||(41182581-41182691)
chr8 (112-226)||(278508-278619)
chr8 (112-226)||(637233-637344)
chr8 (112-226)||(823036-823147)
chr8 (112-226)||(26965546-26965657)
chr8 (112-224)||(4621666-4621775)
chr8 (112-226)||(6096607-6096719)
chr8 (112-226)||(13139490-13139601)
chr8 (112-226)||(41181813-41181924)
chr8 (112-226)||(41546627-41546738)
chr8 (112-226)||(38099040-38099151)
chr8 (112-226)||(36193192-36193303)
chr8 (112-226)||(38576765-38576876)
chr8 (161-226)||(2081548-2081612)
chr8 (112-222)||(3703353-3703460)
chr8 (112-210)||(23345358-23345453)
chr8 (112-226)||(30554887-30555000)
chr8 (112-226)||(42737301-42737413)
chr8 (112-226)||(45407423-45407535)
chr8 (112-226)||(3851804-3851915)
chr8 (112-226)||(18087678-18087789)
chr8 (113-226)||(39859735-39859845)
chr8 (113-226)||(40302595-40302707)
chr8 (112-220)||(30111699-30111804)
chr8 (112-219)||(36192394-36192498)
chr8 (161-206)||(13140356-13140401)
chr8 (112-226)||(42647082-42647193)
chr8 (164-219)||(29872036-29872091)
chr8 (164-219)||(30112009-30112064)
chr8 (161-220)||(40303412-40303471)
chr8 (161-220)||(43694208-43694267)
chr8 (112-219)||(638046-638150)
chr8 (161-219)||(11691311-11691369)
chr8 (162-220)||(30555731-30555789)
chr8 (112-219)||(38060243-38060347)
chr8 (112-204)||(277717-277806)
chr8 (112-204)||(823849-823938)
chr8 (161-220)||(3850990-3851049)
chr8 (161-220)||(39858952-39859011)
chr8 (161-220)||(45408273-45408332)
chr8 (112-219)||(6095768-6095872)
chr8 (112-203)||(23346165-23346253)
chr8 (112-203)||(41545818-41545906)
chr8 (161-219)||(42736549-42736607)
chr8 (166-219)||(30088880-30088933)
chr8 (112-226)||(40618279-40618392)
chr8 (168-219)||(13800930-13800981)
chr8 (161-220)||(42646289-42646348)
chr8 (112-146)||(28085004-28085038)
chr8 (164-206)||(29872337-29872379)
chr8 (162-219)||(15882483-15882540)
[»] scaffold0115 (2 HSPs)
scaffold0115 (112-222)||(30465-30572)
scaffold0115 (161-206)||(22916-22961)
[»] chr7 (55 HSPs)
chr7 (112-226)||(41338060-41338171)
chr7 (113-226)||(44884541-44884651)
chr7 (112-226)||(38179843-38179954)
chr7 (112-226)||(41856453-41856564)
chr7 (112-226)||(47907119-47907230)
chr7 (112-226)||(723669-723780)
chr7 (112-226)||(3412846-3412957)
chr7 (112-226)||(16274090-16274201)
chr7 (112-226)||(21817138-21817249)
chr7 (112-226)||(46553616-46553727)
chr7 (112-222)||(4657198-4657305)
chr7 (112-226)||(33244778-33244889)
chr7 (112-226)||(40013806-40013917)
chr7 (112-226)||(44457078-44457188)
chr7 (112-226)||(48950414-48950525)
chr7 (114-226)||(9659189-9659299)
chr7 (161-226)||(4861733-4861798)
chr7 (112-226)||(20122096-20122207)
chr7 (161-226)||(17286504-17286569)
chr7 (112-223)||(46001604-46001712)
chr7 (112-220)||(46934416-46934520)
chr7 (112-226)||(17961689-17961800)
chr7 (112-219)||(47505453-47505559)
chr7 (112-226)||(23592721-23592832)
chr7 (161-226)||(21737271-21737336)
chr7 (112-226)||(44520311-44520422)
chr7 (113-219)||(44458261-44458364)
chr7 (161-220)||(17967314-17967373)
chr7 (112-196)||(19233255-19233339)
chr7 (113-226)||(41287733-41287840)
chr7 (112-219)||(41337225-41337329)
chr7 (112-219)||(47907964-47908068)
chr7 (161-226)||(241384-241449)
chr7 (115-219)||(4658060-4658162)
chr7 (161-220)||(23593568-23593627)
chr7 (161-220)||(30758263-30758322)
chr7 (161-220)||(47504551-47504610)
chr7 (161-220)||(48606625-48606684)
chr7 (112-226)||(8391620-8391730)
chr7 (112-219)||(21736413-21736520)
chr7 (161-219)||(21816323-21816381)
chr7 (161-219)||(28588617-28588675)
chr7 (161-219)||(41289160-41289218)
chr7 (112-203)||(44883682-44883769)
chr7 (161-226)||(46935289-46935354)
chr7 (186-226)||(48605868-48605908)
chr7 (161-220)||(8392471-8392530)
chr7 (164-219)||(13930796-13930851)
chr7 (161-204)||(33245642-33245685)
chr7 (164-219)||(35214630-35214685)
chr7 (161-220)||(44521098-44521157)
chr7 (161-219)||(9662599-9662657)
chr7 (161-203)||(40014690-40014732)
chr7 (161-219)||(48684183-48684241)
chr7 (161-203)||(48951285-48951327)
[»] chr4 (52 HSPs)
chr4 (112-226)||(54921157-54921268)
chr4 (112-226)||(3034038-3034149)
chr4 (112-226)||(9367065-9367177)
chr4 (112-226)||(7489048-7489161)
chr4 (112-226)||(20352208-20352319)
chr4 (112-226)||(46719467-46719579)
chr4 (114-226)||(8941011-8941121)
chr4 (127-226)||(17362832-17362928)
chr4 (112-226)||(30823868-30823981)
chr4 (112-226)||(41039754-41039865)
chr4 (112-226)||(55449624-55449735)
chr4 (114-226)||(13530213-13530323)
chr4 (112-226)||(4654732-4654844)
chr4 (112-226)||(16666442-16666553)
chr4 (112-226)||(49875499-49875610)
chr4 (113-226)||(20785311-20785421)
chr4 (112-224)||(52449115-52449224)
chr4 (112-226)||(28172326-28172439)
chr4 (112-226)||(23931768-23931879)
chr4 (113-224)||(27956708-27956816)
chr4 (161-226)||(23417384-23417449)
chr4 (112-226)||(42179997-42180108)
chr4 (112-226)||(17519069-17519181)
chr4 (168-226)||(31289614-31289672)
chr4 (112-226)||(34074747-34074857)
chr4 (161-226)||(35046046-35046111)
chr4 (112-226)||(43304629-43304740)
chr4 (112-217)||(31291703-31291805)
chr4 (161-226)||(13861750-13861815)
chr4 (161-226)||(17519839-17519903)
chr4 (112-206)||(41040572-41040663)
chr4 (112-206)||(46718656-46718747)
chr4 (112-206)||(54920337-54920428)
chr4 (112-220)||(27958500-27958605)
chr4 (161-220)||(35825469-35825528)
chr4 (161-219)||(4653897-4653955)
chr4 (112-219)||(16665585-16665689)
chr4 (161-203)||(23932610-23932652)
chr4 (161-219)||(30824744-30824802)
chr4 (112-219)||(49874670-49874774)
chr4 (161-219)||(52448314-52448372)
chr4 (161-203)||(55450454-55450496)
chr4 (170-219)||(11193498-11193547)
chr4 (112-206)||(23418321-23418412)
chr4 (161-206)||(34073953-34073998)
chr4 (161-220)||(35045894-35045953)
chr4 (161-220)||(50495322-50495381)
chr4 (161-219)||(3034880-3034938)
chr4 (161-203)||(9367954-9367996)
chr4 (161-219)||(13533623-13533681)
chr4 (161-203)||(17362043-17362085)
chr4 (120-148)||(35826242-35826270)
[»] chr3 (66 HSPs)
chr3 (112-226)||(45172483-45172594)
chr3 (112-226)||(4231027-4231138)
chr3 (112-226)||(13243343-13243453)
chr3 (112-226)||(50546654-50546765)
chr3 (112-226)||(11123412-11123523)
chr3 (112-226)||(15082891-15083002)
chr3 (112-226)||(23021792-23021904)
chr3 (112-226)||(27127938-27128049)
chr3 (112-226)||(30438445-30438556)
chr3 (112-226)||(41696096-41696210)
chr3 (112-226)||(52745827-52745939)
chr3 (112-226)||(18411885-18411996)
chr3 (112-226)||(41103492-41103603)
chr3 (112-226)||(47911124-47911235)
chr3 (119-226)||(37218350-37218454)
chr3 (112-226)||(2219743-2219854)
chr3 (112-226)||(16010575-16010685)
chr3 (112-226)||(22606612-22606723)
chr3 (112-223)||(45051920-45052027)
chr3 (112-226)||(31311846-31311956)
chr3 (112-226)||(8849934-8850043)
chr3 (112-226)||(37178412-37178523)
chr3 (112-226)||(38698580-38698691)
chr3 (112-226)||(51721035-51721147)
chr3 (112-206)||(40424616-40424707)
chr3 (112-219)||(53776588-53776690)
chr3 (161-226)||(50536134-50536199)
chr3 (113-226)||(3890955-3891068)
chr3 (161-220)||(55219697-55219756)
chr3 (112-198)||(40907909-40907989)
chr3 (161-219)||(42826930-42826988)
chr3 (112-219)||(55412944-55413049)
chr3 (182-226)||(29894592-29894636)
chr3 (161-220)||(31312678-31312737)
chr3 (112-151)||(44841447-44841486)
chr3 (161-220)||(51721855-51721914)
chr3 (112-219)||(2218929-2219033)
chr3 (112-219)||(16009731-16009835)
chr3 (112-219)||(27127120-27127224)
chr3 (161-219)||(30362650-30362708)
chr3 (112-203)||(41697098-41697185)
chr3 (161-219)||(50547530-50547588)
chr3 (112-206)||(30042492-30042583)
chr3 (161-212)||(10825943-10825994)
chr3 (168-219)||(29835479-29835530)
chr3 (161-220)||(37181041-37181100)
chr3 (112-226)||(42827761-42827868)
chr3 (112-203)||(4231926-4232014)
chr3 (161-219)||(16464861-16464919)
chr3 (161-219)||(22427972-22428030)
chr3 (161-219)||(23020729-23020787)
chr3 (112-219)||(27330924-27331028)
chr3 (112-226)||(30361822-30361929)
chr3 (112-219)||(53777369-53777473)
chr3 (161-206)||(27328101-27328146)
chr3 (166-219)||(33213749-33213802)
chr3 (161-206)||(44842245-44842290)
chr3 (112-148)||(2584388-2584424)
chr3 (195-226)||(40908337-40908368)
chr3 (161-219)||(18762875-18762933)
chr3 (161-203)||(37219249-37219291)
chr3 (161-203)||(43339315-43339357)
chr3 (161-219)||(45052766-45052824)
chr3 (161-219)||(52746364-52746422)
chr3 (161-206)||(41102626-41102671)
chr3 (161-206)||(45170946-45170991)
[»] chr6 (26 HSPs)
chr6 (112-226)||(953834-953944)
chr6 (112-226)||(16922025-16922136)
chr6 (116-226)||(27784206-27784313)
chr6 (114-226)||(4588045-4588154)
chr6 (112-222)||(17557760-17557867)
chr6 (112-226)||(23581989-23582101)
chr6 (112-226)||(14105715-14105826)
chr6 (112-226)||(5686518-5686629)
chr6 (112-226)||(24084342-24084455)
chr6 (114-226)||(28580224-28580336)
chr6 (112-226)||(15287641-15287750)
chr6 (112-226)||(25120422-25120533)
chr6 (112-219)||(1090388-1090492)
chr6 (112-149)||(11152843-11152880)
chr6 (161-206)||(11153736-11153781)
chr6 (112-208)||(15288113-15288206)
chr6 (161-203)||(954681-954723)
chr6 (112-203)||(4588898-4588986)
chr6 (161-219)||(5687361-5687419)
chr6 (161-219)||(27783379-27783437)
chr6 (112-206)||(23573990-23574081)
chr6 (161-220)||(25119608-25119667)
chr6 (161-219)||(14104894-14104952)
chr6 (165-219)||(18864601-18864655)
chr6 (166-219)||(944793-944845)
chr6 (161-226)||(21860438-21860503)
[»] chr5 (35 HSPs)
chr5 (112-226)||(9593609-9593721)
chr5 (112-226)||(12501189-12501300)
chr5 (112-226)||(19666404-19666515)
chr5 (112-226)||(39590493-39590604)
chr5 (112-226)||(42610087-42610198)
chr5 (112-222)||(744259-744366)
chr5 (112-226)||(823000-823111)
chr5 (112-226)||(30128798-30128909)
chr5 (112-226)||(37272497-37272611)
chr5 (112-226)||(27018304-27018415)
chr5 (112-226)||(37938666-37938776)
chr5 (112-224)||(20544374-20544482)
chr5 (112-226)||(9985539-9985650)
chr5 (112-226)||(19504835-19504947)
chr5 (112-226)||(11986378-11986489)
chr5 (112-226)||(31547644-31547755)
chr5 (112-219)||(7179849-7179953)
chr5 (113-226)||(11078217-11078327)
chr5 (112-194)||(34401976-34402055)
chr5 (161-220)||(13304496-13304555)
chr5 (161-220)||(27551699-27551758)
chr5 (112-219)||(9592717-9592821)
chr5 (112-203)||(11985581-11985669)
chr5 (161-205)||(37271705-37271749)
chr5 (161-220)||(7180709-7180768)
chr5 (161-219)||(12500317-12500375)
chr5 (161-219)||(27019171-27019229)
chr5 (161-219)||(37939539-37939597)
chr5 (112-206)||(30129949-30130040)
chr5 (161-220)||(31551195-31551255)
chr5 (161-216)||(9986387-9986442)
chr5 (161-203)||(15421276-15421318)
chr5 (161-206)||(744644-744689)
chr5 (166-219)||(31480794-31480847)
chr5 (112-148)||(27552484-27552520)
[»] chr1 (34 HSPs)
chr1 (112-226)||(30837940-30838050)
chr1 (112-226)||(31031844-31031955)
chr1 (112-226)||(33706333-33706444)
chr1 (116-226)||(21097160-21097268)
chr1 (112-226)||(7154626-7154737)
chr1 (112-226)||(14535533-14535643)
chr1 (112-226)||(44510601-44510712)
chr1 (112-226)||(51088404-51088515)
chr1 (112-208)||(10774508-10774601)
chr1 (112-226)||(7557287-7557400)
chr1 (112-219)||(29647759-29647863)
chr1 (161-226)||(36732307-36732372)
chr1 (113-226)||(35956085-35956194)
chr1 (112-220)||(30301185-30301290)
chr1 (161-226)||(29520406-29520471)
chr1 (161-219)||(51087644-51087702)
chr1 (112-226)||(12769396-12769505)
chr1 (113-226)||(25657561-25657671)
chr1 (161-220)||(25656763-25656822)
chr1 (112-219)||(10773650-10773754)
chr1 (113-220)||(33005431-33005535)
chr1 (112-152)||(48129445-48129485)
chr1 (161-220)||(29648595-29648654)
chr1 (112-219)||(33004651-33004754)
chr1 (161-219)||(35955341-35955399)
chr1 (161-219)||(44511461-44511519)
chr1 (166-219)||(47035961-47036014)
chr1 (112-201)||(7153857-7153943)
chr1 (164-203)||(34334168-34334207)
chr1 (161-220)||(46464050-46464109)
chr1 (161-219)||(33705519-33705577)
chr1 (186-220)||(46119161-46119195)
chr1 (161-202)||(7556961-7557002)
chr1 (113-141)||(29520488-29520516)
[»] chr2 (40 HSPs)
chr2 (112-226)||(4736895-4737004)
chr2 (112-226)||(25761333-25761444)
chr2 (112-226)||(38280441-38280552)
chr2 (112-226)||(3905089-3905200)
chr2 (112-226)||(14004195-14004306)
chr2 (112-226)||(15154289-15154400)
chr2 (112-226)||(25225166-25225276)
chr2 (113-226)||(75754-75866)
chr2 (112-226)||(2290571-2290682)
chr2 (112-223)||(1053318-1053427)
chr2 (114-226)||(39067221-39067329)
chr2 (112-226)||(6647027-6647138)
chr2 (112-220)||(39068006-39068111)
chr2 (112-226)||(3753183-3753292)
chr2 (112-226)||(42079038-42079147)
chr2 (112-152)||(39965404-39965444)
chr2 (112-219)||(7575406-7575509)
chr2 (161-220)||(27550662-27550721)
chr2 (113-220)||(3753942-3754047)
chr2 (112-222)||(15400698-15400809)
chr2 (112-219)||(27549865-27549969)
chr2 (112-219)||(38281269-38281373)
chr2 (161-206)||(15153505-15153550)
chr2 (161-226)||(28390133-28390198)
chr2 (113-226)||(6645998-6646110)
chr2 (161-220)||(3850848-3850907)
chr2 (112-203)||(1054144-1054232)
chr2 (188-226)||(39965361-39965399)
chr2 (161-206)||(76686-76731)
chr2 (112-226)||(3849951-3850059)
chr2 (112-206)||(37724513-37724604)
chr2 (161-206)||(39966213-39966258)
chr2 (164-219)||(12522409-12522464)
chr2 (161-220)||(28391001-28391060)
chr2 (161-220)||(39774235-39774294)
chr2 (161-220)||(42079941-42080000)
chr2 (161-206)||(15399930-15399975)
chr2 (115-144)||(39773506-39773535)
chr2 (166-226)||(2291352-2291412)
chr2 (116-148)||(38408115-38408147)
[»] scaffold0006 (2 HSPs)
scaffold0006 (112-226)||(56267-56378)
scaffold0006 (161-206)||(55460-55505)
[»] scaffold0208 (2 HSPs)
scaffold0208 (112-226)||(4041-4152)
scaffold0208 (161-220)||(4866-4925)
[»] scaffold0259 (2 HSPs)
scaffold0259 (112-226)||(4377-4490)
scaffold0259 (112-220)||(4977-5082)


Alignment Details
Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30476265 - 30476154
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30476265 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 30476169  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  30476168 aatgtaatcatgtct 30476154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 17946876 - 17946766
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17946876 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 17946780  T
Q  212 aatgtaatcatgtc 225  Q
    ||||||||||||||    
T  17946779 aatgtaatcatgtc 17946766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 16097389 - 16097498
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16097389 gatgtatatgtgcttttataagagataaaagatctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 16097485  T
Q  212 aatgtaatcatgt 224  Q
    |||||||||||||    
T  16097486 aatgtaatcatgt 16097498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 17852678 - 17852570
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17852678 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaaa--aataaagataaatgacccaagtgtaacaaataaataagataaaggatctct 17852581  T
Q  212 aatgtaatcat 222  Q
    |||||||||||    
T  17852580 aatgtaatcat 17852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 18957182 - 18957293
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  18957182 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaatgacccaagtgtaacaaataaataagataaaagatctct 18957278  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  18957279 aatgtaatcatgtct 18957293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 44257836 - 44257947
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||| |||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44257836 gatggatatgtgcttttttaagagataaaagacctaagcggaaaga---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 44257932  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  44257933 aatgtaatcatgtct 44257947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 15881526 - 15881415
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| || |||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15881526 gatgtatatgtgcttttataagagataaaagacatatgcgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 15881430  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  15881429 aatgtaatcatgtct 15881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 38059537 - 38059425
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  38059537 gatgtatatgtgcttttataagagataaaagacttaagcggaaaaaa--aataaagataaaggacccaaatgtaacaaataaataagataacggatctct 38059440  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  38059439 aatgtaatcatgtct 38059425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 41182691 - 41182581
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41182691 gatgtatatgtgcttttataagagataaaagatctaagcgaaaaa----aataaagataaaggacccaagtgtaacaaataaataagataaatgatctct 41182596  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41182595 aatgtaatcatgtct 41182581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 278508 - 278619
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  278508 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggaccaaaatgtaacaaataaataagataaaggatctat 278604  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  278605 aatgtaatcatgtct 278619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 637344 - 637233
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  637344 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggaccaaaatgtaacaaataaataagataaaggatctat 637248  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  637247 aatgtaatcatgtct 637233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 823147 - 823036
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  823147 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggaccaaaatgtaacaaataaataagataaaggatctat 823051  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  823050 aatgtaatcatgtct 823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 26965657 - 26965546
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  26965657 gatgtatacgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataaaataaaggatctcc 26965561  T
Q  212 aatgtaatcatgtct 226  Q
    ||| |||||||||||    
T  26965560 aatataatcatgtct 26965546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 4621775 - 4621666
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  4621775 gatgtatatgtgcttttataagagataaaagacctaagcgggaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatctcc 4621679  T
Q  212 aatgtaatcatgt 224  Q
    |||||||| ||||    
T  4621678 aatgtaatgatgt 4621666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 6096607 - 6096719
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        || ||||||||| ||| |||||||||||||||||||||||||| || ||||    
T  6096607 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaaa--aaaaaagataaatgactcaagtgtaacaaataaataagataaatgacctct 6096704  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  6096705 aatgtaatcatgtct 6096719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 13139601 - 13139490
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||| |||| |||        ||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  13139601 gatgtatatgtgcttttataagagataaaagatctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaaagatctct 13139505  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  13139504 aatgtaatcatgtct 13139490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 41181924 - 41181813
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| ||         ||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  41181924 gatgtatatgtgcttttatgagagataaaagacctaaacgaaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaaggatctct 41181828  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41181827 aatgtaatcatgtct 41181813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 41546627 - 41546738
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||| |||| ||||||||||||||||||||||| || |    
T  41546627 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggaccgaagtataacaaataaataagataaaggacctat 41546723  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41546724 aatgtaatcatgtct 41546738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 38099040 - 38099151
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  38099040 gatgtatatgtgcttttataagagataaaagacctaaacggaaaaat---ataaagataaaggaccaaattgttacaaataaataagataaaggacctct 38099136  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  38099137 aatgtaatcatgtct 38099151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 36193192 - 36193303
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||| |||||||||||||||||||||| |||        |||||||||||||||| |||||||||||||||||||||||||| || ||||    
T  36193192 gatgtatatgtgctcttataagagataaaagacctaaacggaaaaa---aataaagataaaggactcaagtgtaacaaataaataagataaatgacctct 36193288  T
Q  212 aatgtaatcatgtct 226  Q
    || ||||||||||||    
T  36193289 aaggtaatcatgtct 36193303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 38576876 - 38576765
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||| |||||||||||||||| |||        ||||||||||||||||| || ||| |||||||||||||||||||||||||     
T  38576876 gatgtatatgtgcttttatatgagataaaagacctaaacggaaaaa---aataaagataaaggaccaaaatgtcacaaataaataagataaaggatctca 38576780  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  38576779 aatgtaatcatgtct 38576765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 2081612 - 2081548
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2081612 aataaagataaaggacc-aagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 2081548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 3703460 - 3703353
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||  || ||||||||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  3703460 gatgtatacatgtttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaaaaaataaataagataaaagatctct 3703364  T
Q  212 aatgtaatcat 222  Q
    ||| |||||||    
T  3703363 aatataatcat 3703353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 23345453 - 23345358
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctc 210  Q
    ||||||||| |||||||||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23345453 gatgtatatatgcttttataagagataaaagacctaagcggaaaaa---aataaagataaagaacccaagtgtaacaaataaataagataaaagatctc 23345358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30555000 - 30554887
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||| ||| |||        ||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  30555000 gatgtatatgtgcttttatgagagataaaagacgtaaacggaaataaa-aataaagataaaggaccaaagtgttacaaataaataagataaaggacctct 30554902  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  30554901 aatgtaatcctgtct 30554887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 42737301 - 42737413
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||||  || ||| |||||||||||||||||| || ||||    
T  42737301 gatgtatatgtgcttttataagagataaaagacctaaacgaaaaaaa--aataaagataaaggactaaaatgttacaaataaataagataaatgacctct 42737398  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  42737399 aatgtaatcatgtct 42737413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 45407535 - 45407423
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||||||| |||||| |||||||||||||||| | || ||||    
T  45407535 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaaa--aataaagataaaggaccaaagtgttacaaataaataagatagaagacctct 45407438  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  45407437 aatgtaatcctgtct 45407423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 3851804 - 3851915
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||| ||||  ||        |||||||||||||||   |||||| |||||||||||||| |||||| ||||    
T  3851804 gatgtatatgtgcttttataagagataaaagagctaaagggaaaaa---aataaagataaaggagaaaagtgttacaaataaataagaaaaaggacctct 3851900  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  3851901 aatgtaatcatgtct 3851915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 18087789 - 18087678
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||| ||| |||        ||||||||||||||||| |||||| |||||||||||||||||| || || |    
T  18087789 gatgtatatgtgcttttatgagagataaaagacataaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaaagaccttt 18087693  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  18087692 aatgtaatcttgtct 18087678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 39859735 - 39859845
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    ||||||||||||||||||||||||||||||||||||  ||        ||||||||||||  ||| || ||| |||||||||||||| ||||||  ||||    
T  39859735 atgtatatgtgcttttataagagataaaagacctaaatggaaaaa---aataaagataaaataccaaaatgttacaaataaataagaaaaaggacatcta 39859831  T
Q  213 atgtaatcatgtct 226  Q
    ||||||||||||||    
T  39859832 atgtaatcatgtct 39859845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 40302707 - 40302595
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||||||||||||||||||||| |||        ||||||||||||  | | || ||| |||||||||||||| ||||||  ||||    
T  40302707 atgtatatgtgcttttataagagataaaagacctaaacggaaaaaaa-aataaagataaaataacaaaatgttacaaataaataagaaaaaggacatcta 40302609  T
Q  213 atgtaatcatgtct 226  Q
    ||||||||||||||    
T  40302608 atgtaatcatgtct 40302595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 30111804 - 30111699
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||| |||||||||||  ||||||||| |||||||||||        ||||||||||||||||| |||||| ||||||||||||||||| ||| | ||    
T  30111804 gatgtacatgtgcttttaagagagataaaggacctaagcggggaaa---aataaagataaaggaccaaagtgttacaaataaataagataatggacccct 30111708  T
Q  212 aatgtaatc 220  Q
    |||||||||    
T  30111707 aatgtaatc 30111699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 36192498 - 36192394
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        ||||||||||||||||| |||||| ||||||||||||||||||||| |  |    
T  36192498 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaaggacccat 36192402  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  36192401 aatgtaat 36192394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 13140356 - 13140401
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  13140356 aataaagataaaggaccaaagtgtaacaaataaataagataaagga 13140401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 42647082 - 42647193
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||| ||||  |||| | |||||||||||||||||| || ||||    
T  42647082 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataatggactaaagttttacaaataaataagataaaagacctct 42647178  T
Q  212 aatgtaatcatgtct 226  Q
     ||||||| ||||||    
T  42647179 gatgtaattatgtct 42647193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 29872091 - 29872036
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||    
T  29872091 aaagataaaggaccaaagtgttacaaataaataagataaaggacccctaatgtaat 29872036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 30112009 - 30112064
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||    
T  30112009 aaagataaaggaccaaagtgttacaaataaataagataaaggacctctagtgtaat 30112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 40303412 - 40303471
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||||  ||||||||||    
T  40303412 aataaagataaaggaccaaagtgttacaaataaataagataaaagatccataatgtaatc 40303471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 43694208 - 43694267
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |  ||||||||||    
T  43694208 aataaagataaaggatcaaagtgtaacaaataaataagataaaggaccaataatgtaatc 43694267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 638046 - 638150
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  638046 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 638142  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  638143 aatgtaat 638150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 11691311 - 11691369
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||| |||| || ||||| ||||||||||||||||||||| ||||||||||    
T  11691311 aataaagataaatgaccaaactgtaataaataaataagataaaggatccctaatgtaat 11691369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 30555731 - 30555789
Alignment:
Q  162 ataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||||| | |||||| ||||||||||||||||||||| | |||||||||||    
T  30555731 ataaagataaaggatcaaagtgttacaaataaataagataaaggacccctaatgtaatc 30555789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 38060243 - 38060347
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  38060243 gatgtatatgtgcttttaagagagataaatgacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 38060339  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  38060340 aatgtaat 38060347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 277806 - 277717
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaag 204  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| |||||||||||||||||||    
T  277806 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaag 277717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 823849 - 823938
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaag 204  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| |||||||||||||||||||    
T  823849 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaag 823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 3851049 - 3850990
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||| || ||||||||||    
T  3851049 aataaagataaaggaaccaaatgttacgaataaataagataaaggacctataatgtaatc 3850990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 39859011 - 39858952
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||| |  ||||||||||    
T  39859011 aataaagataaagaaccaaagtgttacaaataaataagataaaggacccataatgtaatc 39858952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 45408273 - 45408332
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | || ||| ||||||||||||||||||||| | |||||||||||    
T  45408273 aataaagataaaggatcaaaatgttacaaataaataagataaaggacccctaatgtaatc 45408332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 6095872 - 6095768
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        ||||||||||||||||| |  ||| ||||||||||||||||||||| |  |    
T  6095872 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagataaaggaccaacatgttacaaataaataagataaaggacccat 6095776  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  6095775 aatgtaat 6095768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 23346165 - 23346253
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||||||||||| |||        |||||||| |||||||| |||||| ||||| ||||||||||||    
T  23346165 gatgtatatgtgcttttaagagagataaaagacctaaccgggaaaa---aataaagacaaaggaccaaagtgttacaaacaaataagataaa 23346253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 41545906 - 41545818
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||    
T  41545906 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaa 41545818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 42736607 - 42736549
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||||| || |||||| ||||||||||||||||||||| |  |||||||||    
T  42736607 aataaagataaaggtccaaagtgttacaaataaataagataaaggacccataatgtaat 42736549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 30088880 - 30088933
Alignment:
Q  166 agataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||| |||||| |||||||||||||||||| || ||||||| ||||    
T  30088880 agataaaggaccaaagtgttacaaataaataagataaacgacctctaatataat 30088933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 40618279 - 40618392
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||| ||||| |||        |||||| |||||| |   |||||| ||||||||| |||||||| || ||||    
T  40618279 gatgtatatgtgcttttatgagagataaaagtcctaaacggaaaaaaa-aataaaaataaagaaaaaaagtgttacaaataaacaagataaatgacctct 40618377  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  40618378 aatgtaatcttgtct 40618392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 13800981 - 13800930
Alignment:
Q  168 ataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||| |||| |||||| ||||||||||||||||||||| ||||||| ||||    
T  13800981 ataaatgaccaaagtgttacaaataaataagataaaggacctctaatataat 13800930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 42646348 - 42646289
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||| || | |||||| ||||||||||||||||||||| | |||||| ||||    
T  42646348 aataaagataaatgatcaaagtgttacaaataaataagataaaggacccctaatgcaatc 42646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 28085038 - 28085004
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacct 146  Q
    ||||||||||||||||||| |||||||||||||||    
T  28085038 gatgtatatgtgcttttatgagagataaaagacct 28085004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 29872337 - 29872379
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||||||| | |||||| |||||||||||||||||||||    
T  29872337 aaagataaaggatcaaagtgttacaaataaataagataaagga 29872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 15882483 - 15882540
Alignment:
Q  162 ataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||| |||||||| |||||| ||||| ||||||||||||||| |  |||||||||    
T  15882483 ataaagacaaaggaccaaagtgttacaaacaaataagataaaggacccataatgtaat 15882540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 30465 - 30572
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30465 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 30561  T
Q  212 aatgtaatcat 222  Q
    |||||||||||    
T  30562 aatgtaatcat 30572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 22961 - 22916
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| | |||||||||||||||||||    
T  22961 aataaagacaaaggaccaaagtgttataaataaataagataaagga 22916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 41338060 - 41338171
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41338060 gatgtatatgtgcttttataagagataaaagacttaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 41338156  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41338157 aatgtaatcatgtct 41338171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 44884541 - 44884651
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44884541 atgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctata 44884637  T
Q  213 atgtaatcatgtct 226  Q
    ||||||||||||||    
T  44884638 atgtaatcatgtct 44884651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 38179954 - 38179843
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38179954 gatgtatatgtgcttttataagagataaaagacctaagcgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 38179858  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  38179857 aatgtaatcatgtct 38179843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 41856564 - 41856453
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| |||||||        |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41856564 gatgtatatgtgcttttataagagataaaagacttaagcggaaaaa---aataaagataaacgacccaagtgtaacaaataaataagataaaggatctct 41856468  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41856467 aatgtaatcatgtct 41856453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 47907230 - 47907119
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  47907230 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggatccaagtgtaacaaataaataagataaaagatctct 47907134  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  47907133 aatgtaatcatgtct 47907119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 723780 - 723669
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  723780 gatgtatatgtgcttttataagagataaaagacctaagcgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 723684  T
Q  212 aatgtaatcatgtct 226  Q
    |||| ||||||||||    
T  723683 aatgcaatcatgtct 723669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 3412957 - 3412846
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  3412957 gatgtatatgtgcttttgtaagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatcttt 3412861  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  3412860 aatgtaatcatgtct 3412846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 16274201 - 16274090
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  16274201 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggactcaagtgtaacaaataaataaaataaagaatctct 16274105  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  16274104 aatgtaatcatgtct 16274090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 21817138 - 21817249
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  21817138 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatctcc 21817234  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  21817235 aatgtaatcatgtct 21817249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 46553727 - 46553616
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||| |||||||||||||||||||||| ||||||||        |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46553727 gatgtatatatgcttttataagagataaaagatctaagcggaaaaa---aataaagataaatgacccaagtgtaacaaataaataagataaaggatctct 46553631  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  46553630 aatgtaatcatgtct 46553616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 4657305 - 4657198
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4657305 gatgtatatgtgcttttataagagataaaagacctaagtgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 4657209  T
Q  212 aatgtaatcat 222  Q
    |||||||||||    
T  4657208 aatgtaatcat 4657198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 33244889 - 33244778
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||| |||||      
T  33244889 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatcttc 33244793  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  33244792 aatgtaatcatgtct 33244778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 40013917 - 40013806
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||||||||| | || |||    
T  40013917 gatgtatatgtgcttttataagagataaaagacctgagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataatgaatatct 40013821  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  40013820 aatgtaatcatgtct 40013806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 44457188 - 44457078
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  44457188 gatgtatatgtgcttttataagagataaaagacctaagtgaaaaa----aataaagataaaggacccaagtgtaacaaataaataaaataaaggatcttt 44457093  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  44457092 aatgtaatcatgtct 44457078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 48950525 - 48950414
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||| |||||||| |||||||        |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  48950525 gatgtatatgtgcttttataagagttaaaagacttaagcggaaaaa---aataaagataaatgactcaagtgtaacaaataaataagataaaggatctct 48950429  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  48950428 aatgtaatcatgtct 48950414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 9659299 - 9659189
Alignment:
Q  114 tgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaa 213  Q
    ||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  9659299 tgtatatgtgcttttataagagataaaagacctaaacggaaaaaa--aataaagataaaggaccaaaatgttacaaataaataagataaaggatctctaa 9659202  T
Q  214 tgtaatcatgtct 226  Q
    |||||||||||||    
T  9659201 tgtaatcatgtct 9659189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 4861733 - 4861798
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4861733 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 4861798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 20122096 - 20122207
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||| ||||||||||||||||||         |||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  20122096 gatgtatatgtgcttttataaaagataaaagacctaagcgaaaaaa---aataaagataaaagactaaagtgtaacaaataaataagataaaggatctct 20122192  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  20122193 aatgtaatcatgtct 20122207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 17286569 - 17286504
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17286569 aataaagataaaggacccaagtgtaacaaataaataagataaaggacctctaatgtaatcatgtct 17286504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 46001604 - 46001712
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||| ||||||| ||        ||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  46001604 gatgtatatgtgcttttataagagataaa-gacctaaacg--aaaaaataataaagatagaggaccaaagtgttacaaataaataagataaaggatctct 46001700  T
Q  212 aatgtaatcatg 223  Q
    ||||||||||||    
T  46001701 aatgtaatcatg 46001712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 46934520 - 46934416
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||||||| |||||| |||||||||||||||||| ||| |||    
T  46934520 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaa----aataaagataaaggaccaaagtgttacaaataaataagataaatgatttct 46934425  T
Q  212 aatgtaatc 220  Q
    |||||||||    
T  46934424 aatgtaatc 46934416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 17961800 - 17961689
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| |||||||||| |||||| |||        ||||||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  17961800 gatgtatatgtgcttttatgagagataaaaaacctaaacggaaaaa---aataaagataaaggatcaaagtgttacaaataaataagataaaggacctct 17961704  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  17961703 aatgtaatcctgtct 17961689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 47505453 - 47505559
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| ||         ||||||||||| ||||| |||||| ||||||||||||||||||||| ||||    
T  47505453 gatgtatatgtgcttttatgagagataaaagacctaatcgaaaaaaaa-aataaagataacggaccaaagtgttacaaataaataagataaaggacctct 47505551  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  47505552 aatgtaat 47505559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 23592832 - 23592721
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||| |||||| |||||||||||| |||| |||        ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||    
T  23592832 gatgtatatgtgtttttatgagagataaaagatctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagttaaaggacctct 23592736  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  23592735 aatgtaatcctgtct 23592721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 21737271 - 21737336
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||| |||||| |||||||||||||||||| || |||||||||||| ||||||    
T  21737271 aataaagataaaggaccaaagtgttacaaataaataagataaatgagctctaatgtaataatgtct 21737336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 44520422 - 44520311
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        |||||||||||| |||| || ||| |||||||||||||||||| || ||||    
T  44520422 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataaaagaccaaaatgttacaaataaataagataaatgacctct 44520326  T
Q  212 aatgtaatcatgtct 226  Q
    || |||||| |||||    
T  44520325 aacgtaatcgtgtct 44520311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 44458261 - 44458364
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||  ||||||||||||||||| |||        |||||||| |||||||| |||||| ||| |||||||||||||||||||  ||    
T  44458261 atgtatatgtgcttttaagagagataaaagacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacagataaataagataaaggatccata 44458357  T
Q  213 atgtaat 219  Q
    |||||||    
T  44458358 atgtaat 44458364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 17967314 - 17967373
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| || |||||||||||||||||| |||||||||||||    
T  17967314 aataaagataaaggatcaaagtgttactaataaataagataaaggacctctaatgtaatc 17967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 19233255 - 19233339
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaata 196  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||||||| || ||| |||||||||||    
T  19233255 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaaaaaaataaagataaaggaccaaactgttacaaataaata 19233339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 41287840 - 41287733
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||||||||||||||||||||| |||        |||||||||||||||    ||||| |||||||||||||| ||| ||  | ||    
T  41287840 atgtatatgtgcttttataagagataaaagacctaaacggaaaaa---aataaagataaagga---tagtgttacaaataaataagaaaaaagactttta 41287747  T
Q  213 atgtaatcatgtct 226  Q
    ||||||||||||||    
T  41287746 atgtaatcatgtct 41287733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 41337329 - 41337225
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  41337329 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 41337233  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  41337232 aatgtaat 41337225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 47907964 - 47908068
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  47907964 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 47908060  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  47908061 aatgtaat 47908068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 241384 - 241449
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||| || |||||| | |||||||||||||||| || ||||||||||||| |||||    
T  241384 aataaagataaagggccaaagtgttaaaaataaataagataaatgacctctaatgtaatcttgtct 241449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 4658060 - 4658162
Alignment:
Q  115 gtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaat 214  Q
    |||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  ||||    
T  4658060 gtatatgtgcttttaagagagataaaggacctaaacgggaaaaa--aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataat 4658157  T
Q  215 gtaat 219  Q
    |||||    
T  4658158 gtaat 4658162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 23593568 - 23593627
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||||||| ||||||||||||| | |||||||||||    
T  23593568 aataaagataaaggatcaaagtgttacaaatagataagataaaggacccctaatgtaatc 23593627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 30758263 - 30758322
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||| ||| | |||||| |||||||||||||||||| |||| |||||||||||    
T  30758263 aataaagataagggatcaaagtgttacaaataaataagataaatgatccctaatgtaatc 30758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 47504610 - 47504551
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||| || | |||||| ||||||||||||||||||||| | |||||||||||    
T  47504610 aataaagataaatgatcaaagtgttacaaataaataagataaaggacccctaatgtaatc 47504551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 48606625 - 48606684
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||||| |||||| |||||||||||||||||| || |  ||||||||||    
T  48606625 aataaagataaaggaccaaagtgttacaaataaataagataaatgacccataatgtaatc 48606684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 8391730 - 8391620
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||| | | ||||||   |||||||| ||||||| || ||||    
T  8391730 gatgtatatgtgcttttatgagagataaaagacctaaacggaagaaa--aataaagataaagtatcaaagtgt--taaataaattagataaatgacctct 8391635  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  8391634 aatgtaatcttgtct 8391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 21736520 - 21736413
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||| |||||||||||  ||||||||||||||||||| |       |||   |||||||||||| |||||| ||||||||||||||||| | | | ||    
T  21736520 gatgtacatgtgcttttaagagagataaaagacctaagcagaaaaggataaattagataaaggaccaaagtgttacaaataaataagataatgaacccct 21736421  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  21736420 aatgtaat 21736413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 21816381 - 21816323
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  21816381 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 21816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 28588617 - 28588675
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  28588617 aataaagacaaaggaccaaagtgttacaaataaataagataaaggaaccataatgtaat 28588675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 41289160 - 41289218
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||| |  |||||||||    
T  41289160 aataaagataaaggaccaaagtgttacaaataaataaaataaaggacccataatgtaat 41289218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 44883769 - 44883682
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||    
T  44883769 gatgtatatgtgcttttaagagagataaaggacctaaacggaaaa----aataaagacaaaggaccaaagtgttacaaataaataagataaa 44883682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 46935289 - 46935354
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||| |||| || | | |||||||||||||||||| |||| ||||||||||| |||||    
T  46935289 aataaagataaatgaccaaaattttacaaataaataagataaatgatccctaatgtaatcttgtct 46935354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 48605908 - 48605868
Alignment:
Q  186 acaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  48605908 acaaataaataagataaatgacctctaatgtaatcatgtct 48605868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 8392471 - 8392530
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||  ||  |||||| ||||||||||||||||||||| | |||||||||||    
T  8392471 aataaagataaaaaactaaagtgttacaaataaataagataaaggacccctaatgtaatc 8392530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 13930851 - 13930796
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||||| |||||| | ||||||||||||||||||| | ||||| ||||    
T  13930851 aaagataaaggaccaaagtgttaaaaataaataagataaaggacccctaatttaat 13930796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 33245642 - 33245685
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaag 204  Q
    |||||||| |||||||| |||||| |||||||||||||||||||    
T  33245642 aataaagacaaaggaccaaagtgttacaaataaataagataaag 33245685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 35214630 - 35214685
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||||| || ||| |||||||||||||||||||||   ||||||||||    
T  35214630 aaagataaaggaccaaaatgttacaaataaataagataaaggactactaatgtaat 35214685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 44521098 - 44521157
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||| ||||| ||||||||||| | |||||||||||    
T  44521098 aataaagataaaggatcaaagtgttacagataaagaagataaaggacccctaatgtaatc 44521157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 9662599 - 9662657
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||| |||| || ||| ||||||||||||||||||||| |  |||||||||    
T  9662599 aataaagataaaagaccaaattgttacaaataaataagataaaggacccataatgtaat 9662657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 40014690 - 40014732
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  40014690 aataaagacaaaggaccaaagtgttacaaataaataagataaa 40014732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 48684241 - 48684183
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| ||| |||| |||||| ||||||||||||||||||||| |  |||||||||    
T  48684241 aataaagacaaatgaccaaagtgttacaaataaataagataaaggacccataatgtaat 48684183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 48951285 - 48951327
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  48951285 aataaagacaaaggaccaaagtgttacaaataaataagataaa 48951327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 54921157 - 54921268
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54921157 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 54921253  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  54921254 aatgtaatcatgtct 54921268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 3034149 - 3034038
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3034149 gatgtatatgtgcttttataagagataaaggacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 3034053  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  3034052 aatgtaatcatgtct 3034038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 9367177 - 9367065
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9367177 gatgtatatgtgcttttataagagataaaagacctcagcggaaaaaa--aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 9367080  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||| ||||||    
T  9367079 aatgtaattatgtct 9367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 7489048 - 7489161
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7489048 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaaaa-aataaagataaaggacccaagtgtaacaaataaataagataaatgatctct 7489146  T
Q  212 aatgtaatcatgtct 226  Q
    |||  ||||||||||    
T  7489147 aattcaatcatgtct 7489161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 20352319 - 20352208
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  20352319 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataaaataaaggatctct 20352223  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||| ||||||    
T  20352222 aatgtaattatgtct 20352208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 46719467 - 46719579
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  46719467 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaaa--aataaagataaaggatccaagtgtaacaaataaataagataaaggacctct 46719564  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  46719565 aatgtaatcatgtct 46719579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 8941011 - 8941121
Alignment:
Q  114 tgtatatgtgcttttataagag-ataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||||||| ||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8941011 tgtatatgtgcttttataagaggataaaagacctgagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 8941107  T
Q  213 atgtaatcatgtct 226  Q
    ||||||||||||||    
T  8941108 atgtaatcatgtct 8941121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 17362832 - 17362928
Alignment:
Q  127 ttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17362832 ttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 17362928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30823981 - 30823868
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  30823981 gatgtatatgtgcttttataagagataaaagacctaaacggaaaaaaa-aataaagataaaggacccaaatgtaacaaataaataagataaatgatctcc 30823883  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  30823882 aatgtaatcatgtct 30823868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 41039865 - 41039754
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  41039865 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatctcc 41039769  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41039768 aatgtaatcatgtct 41039754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 55449735 - 55449624
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||| | |||||||||||||||||||||||||| ||| ||||    
T  55449735 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaagaatccaagtgtaacaaataaataagataatggacctct 55449639  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  55449638 aatgtaatcatgtct 55449624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 13530323 - 13530213
Alignment:
Q  114 tgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaa 213  Q
    ||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  13530323 tgtatatgtgcttttataagagataaaagacctaaacggaaaaaa--aataaagataaaggaccaaaatgttacaaataaataagataaaggatctctaa 13530226  T
Q  214 tgtaatcatgtct 226  Q
    |||||||||||||    
T  13530225 tgtaatcatgtct 13530213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 4654732 - 4654844
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||  ||||||||||||||||||||||||||||        ||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  4654732 gatgtatatgttgttttataagagataaaagacctaagcggaaaaaa--aataaagataaagaacccaaatgtaacaaataaataagataaaagatctct 4654829  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  4654830 aatgtaatcatgtct 4654844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 16666442 - 16666553
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| |||||||        | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16666442 gatgtatatgtgcttttataagagataaaagacataagcggaaaaa---actaaagataaaggacccaagtgtaacaaataaataagataaaggacctct 16666538  T
Q  212 aatgtaatcatgtct 226  Q
    ||| || ||||||||    
T  16666539 aatttagtcatgtct 16666553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 49875499 - 49875610
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||| |||||||||| || ||||    
T  49875499 gatgtatatgttcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggatccaagtgtaacaaatatataagataaaagacctct 49875595  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  49875596 aatgtaatcatgtct 49875610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 20785421 - 20785311
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||        |||||||||||| |||||||||||||||||||||||||| ||| ||||||||    
T  20785421 atgtatatgtgcttttataagagataaaagatctaagcggaaaaa---aataaagataaatgacccaagtgtaacaaataaataagacaaatgatctcta 20785325  T
Q  213 atgtaatcatgtct 226  Q
    || |||||||||||    
T  20785324 atataatcatgtct 20785311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 52449115 - 52449224
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||| |||||||||||||||        ||||||||||||| |||||| |||||||||||||||||||||| ||||||     
T  52449115 gatgtatatgtgcttttataagagaaaaaagacctaagcggataaa---aataaagataaagaacccaaatgtaacaaataaataagataaatgatctcc 52449211  T
Q  212 aatgtaatcatgt 224  Q
    |||||||||||||    
T  52449212 aatgtaatcatgt 52449224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 28172439 - 28172326
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||  ||||| |||||||||||||||||| || ||||    
T  28172439 gatgtatatgtgcttttataagagataaaagacctaaacggaaaaata-aataaagataaaggaccatagtgttacaaataaataagataaaagacctct 28172341  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  28172340 aatgtaatcatgtct 28172326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 23931879 - 23931768
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||| | ||||  ||        ||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  23931879 gatgtatatgtgcttttataagagataaaatatctaaatggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaatgatctct 23931783  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  23931782 aatgtaatcatgtct 23931768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 27956816 - 27956708
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||||||| ||||||||||||| |||        |||| |||||||||| | |||||||||||||||||||||||||| | |||||    
T  27956816 atgtatatgtgcttttataagaaataaaagacctaaacggaaaaa---aatagagataaaggatcaaagtgtaacaaataaataagataaagaacctcta 27956720  T
Q  213 atgtaatcatgt 224  Q
    ||||||||||||    
T  27956719 atgtaatcatgt 27956708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 23417449 - 23417384
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  23417449 aataaagataaaggacccaaatgtaataaataaataagataaaagatctctaatgtaatcatgtct 23417384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 42179997 - 42180108
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||| ||| ||||||||||||||||| |||        |||||||||||| |||| |||||| ||||||||||||||||||||| || |    
T  42179997 gatgtatatgtgcttctatgagagataaaagacctaaacggaaaaa---aataaagataaacgaccaaagtgttacaaataaataagataaaggacctat 42180093  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  42180094 aatgtaatcatgtct 42180108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 17519181 - 17519069
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| |           |||||||||||||||| |||||| ||||||||||||||||||  ||||||    
T  17519181 gatgtatatgtgcttttataagagataaaagacctaaacaaaaaaaat--ataaagataaaggaccaaagtgttacaaataaataagataaaaaatctct 17519084  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||| ||||||    
T  17519083 aatgtaattatgtct 17519069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 31289672 - 31289614
Alignment:
Q  168 ataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  31289672 ataaaggaccaaagtgtaacaaataaataagataaatgacctctaatgtaatcatgtct 31289614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 34074747 - 34074857
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||        ||||||||||||||||| |||||| ||||||||||||||||||  | ||||    
T  34074747 gatgtatatgtgcttctatgagagataaaagacataaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaa-aacctct 34074842  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  34074843 aatgtaatcatgtct 34074857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 35046046 - 35046111
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||| |||||| |||||||||||||| ||| || || ||||||||||||||||    
T  35046046 aataaagataaaggaccaaagtgttacaaataaataagaaaaaagacctataatgtaatcatgtct 35046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 43304629 - 43304740
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||| || ||||||||||||||||| | |        ||||||||||||||||| |||||| ||||||||||||||||||| | | ||    
T  43304629 gatgtatatgtgctttgatgagagataaaagacctaaactgaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaagaaccgct 43304725  T
Q  212 aatgtaatcatgtct 226  Q
    ||| ||||| |||||    
T  43304726 aatataatcctgtct 43304740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 31291703 - 31291805
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        ||||||||||||||||| |||||| ||||||||| |||||||||||||  |    
T  31291703 gatgtatatgtgcttttaagagagataaatgacctaaacgggaaaa---aataaagataaaggaccgaagtgttacaaataaaaaagataaaggatcctt 31291799  T
Q  212 aatgta 217  Q
    ||||||    
T  31291800 aatgta 31291805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 13861750 - 13861815
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||| |||| |||||| |||||||||||| |||||||| || |||||||||| |||||    
T  13861750 aataaagataaaagaccaaagtgttacaaataaataaaataaaggacctataatgtaatcttgtct 13861815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 17519839 - 17519903
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  17519839 aataaagataaag-actaaagtgttacaaataaataagataaaggacctctaatgtaataatgtct 17519903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 41040572 - 41040663
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||||||||||| | |        |||||||| |||||||| |||||| |||||||||||||||||||||    
T  41040572 gatgtatatgtgcttttaagagagataaaagacctaaacagaaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaagga 41040663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 46718747 - 46718656
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||||||| |||| |||||| |||||||||||||||||||||    
T  46718747 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagataaatgaccaaagtgttacaaataaataagataaagga 46718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 54920428 - 54920337
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| |||||||||||||||||||||    
T  54920428 gatgtatatgtgcttttaagagagataaaggacctaaacggaaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaagga 54920337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 27958500 - 27958605
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||||||||| || |||||| |||||||||||||||||| || |  |    
T  27958500 gatgtatatgtgcttttaagagagataaatgacctaaacggaaaaa---aataaagataaaggtccaaagtgttacaaataaataagataaatgacccat 27958596  T
Q  212 aatgtaatc 220  Q
    |||||||||    
T  27958597 aatgtaatc 27958605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 35825528 - 35825469
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||| |  ||||||||||    
T  35825528 aataaagataaatgaccaaagtgttacaaataaataagataaaggacccataatgtaatc 35825469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4653955 - 4653897
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  4653955 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 4653897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 16665689 - 16665585
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        ||| |||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  16665689 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aattaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 16665593  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  16665592 aatgtaat 16665585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 23932610 - 23932652
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  23932610 aataaagataaatgaccaaagtgtaacaaataaataagataaa 23932652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 30824744 - 30824802
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  30824744 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 30824802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 49874774 - 49874670
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||||||||||||  ||||| |||||||||||| |||||||| |  |    
T  49874774 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagataaaggaccagagtgttacaaataaataatataaaggacccat 49874678  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  49874677 aatgtaat 49874670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 52448372 - 52448314
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  52448372 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 52448314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 55450454 - 55450496
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  55450454 aataaagataaaggaccaaagtgttacaaataaataagataaa 55450496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 11193498 - 11193547
Alignment:
Q  170 aaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||| |||||||||||||||||| || ||||||||||||    
T  11193498 aaaggaccaaagtgttacaaataaataagataaatgacctctaatgtaat 11193547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 23418321 - 23418412
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||  |||||| |||||||||||||||||||||    
T  23418321 gatgtatatgtgcttttaagagagataaatgacctaaacgggaaaa---aataaagacaaaggactaaagtgttacaaataaataagataaagga 23418412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 34073998 - 34073953
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||    
T  34073998 aataaagataaaggatcaaagtgttacaaataaataagataaagga 34073953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 35045953 - 35045894
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||  |||||||||| |||||||||||||||||| || |  ||||||||||    
T  35045953 aataaagataaattacccaagtgttacaaataaataagataaatgacccataatgtaatc 35045894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 50495322 - 50495381
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||||| || |||||| ||||||||||||||||| ||| | || ||||||||    
T  50495322 aataaagataaagggccaaagtgttacaaataaataagataatggacccctgatgtaatc 50495381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 3034880 - 3034938
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||| ||||||||||| |  |||||||||    
T  3034880 aataaagacaaaggaccaaagtgttacaaataaacaagataaaggacccataatgtaat 3034938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 9367954 - 9367996
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  9367954 aataaagacaaaggaccaaagtgttacaaataaataagataaa 9367996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13533623 - 13533681
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||| |||| || ||| ||||||||||||||||||||| |  |||||||||    
T  13533623 aataaagataaaagaccaaattgttacaaataaataagataaaggacccataatgtaat 13533681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 17362085 - 17362043
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  17362085 aataaagacaaaggaccaaagtgttacaaataaataagataaa 17362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 35826242 - 35826270
Alignment:
Q  120 tgtgcttttataagagataaaagacctaa 148  Q
    |||||||||||||||||||||||||||||    
T  35826242 tgtgcttttataagagataaaagacctaa 35826270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 45172483 - 45172594
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45172483 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 45172579  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  45172580 aatgtaatcatgtct 45172594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 4231138 - 4231027
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  4231138 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaagaacccaaatgtaacaaataaataagataaaggatctct 4231042  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  4231041 aatgtaatcatgtct 4231027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 13243343 - 13243453
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  13243343 gatgtatatgtgcttttataagagataaaagacctaagcggaaaa----aataaagataaaggacccaagtgtaacaaataaataagataaatgatttct 13243438  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  13243439 aatgtaatcatgtct 13243453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 50546765 - 50546654
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50546765 gatgaatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggactcaagtgtaacaaataaataagataaaggatctct 50546669  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  50546668 aatgtaatcatgtct 50546654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 11123412 - 11123523
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| |||||||        |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  11123412 gatgtatatgtgcttttataagagataaaagacttaagcggaaaaa---aataaagataaaagacccaagtgtaacaaataaataaaataaaggatctct 11123508  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  11123509 aatgtaatcatgtct 11123523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 15083002 - 15082891
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  15083002 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaatgaccaaagtgtaacaaataaataagataaatgatctct 15082906  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  15082905 aatgtaatcatgtct 15082891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 23021792 - 23021904
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||| |||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23021792 gatgtatatgtgtttttataagagataaaagacctaagcgaaaaaaa--aataaagataaaggactcaagtgtaacaaataaataagataaaggatctct 23021889  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  23021890 aatgtaatcatgtct 23021904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 27127938 - 27128049
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27127938 gatgtatatgtgcttttataagagataaaagacctaagtggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 27128034  T
Q  212 aatgtaatcatgtct 226  Q
    || |||| |||||||    
T  27128035 aacgtaaacatgtct 27128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30438556 - 30438445
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  30438556 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaatataaaggatccaagtgtaacaaataaataagataaatgatctct 30438460  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  30438459 aatgtaatcatgtct 30438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 41696210 - 41696096
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||| |||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41696210 gatgtatatatgcttttataagagataaaagatctaagcggaaaaaaaaaataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 41696111  T
Q  212 aatgtaatcatgtct 226  Q
    |||| ||||||||||    
T  41696110 aatgcaatcatgtct 41696096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 52745939 - 52745827
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||||||||||||||||||||||| ||||||     
T  52745939 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaaa--aataaagataaaggacctaagtgtaacaaataaataagataaatgatctcc 52745842  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  52745841 aatgtaatcatgtct 52745827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 18411885 - 18411996
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||  || ||||||||||||||||||||||||||||||    
T  18411885 gatgtatatgtgcttttataagagataaaagatctaagcggaaaaa---aataaagataaaggacttaaatgtaacaaataaataagataaaggatctct 18411981  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  18411982 aatgtaatcatgtct 18411996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 41103492 - 41103603
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||| ||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  41103492 gatgtatatgtgcttttagaagagataaaagacctaagcggaaaaa---aataaagataaatgacccaagtgtaacaaataaataacataaaagatctct 41103588  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  41103589 aatgtaatcatgtct 41103603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 47911235 - 47911124
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  47911235 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggaccaaagtgtatcaaataaataagataaatgatctct 47911139  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||| ||||||    
T  47911138 aatgtaattatgtct 47911124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 37218454 - 37218350
Alignment:
Q  119 atgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaa 218  Q
    |||||||||||||| ||||||||||| |||||||        |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37218454 atgtgcttttataatagataaaagacttaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaaggatctctaatgtaa 37218358  T
Q  219 tcatgtct 226  Q
    ||||||||    
T  37218357 tcatgtct 37218350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 2219743 - 2219854
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||| ||| |||||||||||||||||||||| ||||||     
T  2219743 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaagactcaaatgtaacaaataaataagataaatgatctcc 2219839  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  2219840 aatgtaatcatgtct 2219854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 16010575 - 16010685
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||| |||||| |||        |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16010575 gatgtatatgtgcttttataagagataaaa-acctaaacggaaaaa---aataaagataaaagacccaagtgtaataaataaataagataaaggatctct 16010670  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  16010671 aatgtaatcatgtct 16010685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 22606612 - 22606723
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||| ||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  22606612 gatgtatatgtgtttttataagagataaaagacctaagaggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatccgt 22606708  T
Q  212 aatgtaatcatgtct 226  Q
    ||| |||||||||||    
T  22606709 aatataatcatgtct 22606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 45052027 - 45051920
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||| ||||||||||||||| ||||||||||||        |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  45052027 gatgtatatgtgtttttataagagataacagacctaagcggaaaaa---aataaagataaaagacccaagtgtaacaaataa-taagataaaggatctct 45051932  T
Q  212 aatgtaatcatg 223  Q
    ||||||||||||    
T  45051931 aatgtaatcatg 45051920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 31311956 - 31311846
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||||| |||||| |||||||||||||| |||||| ||||    
T  31311956 gatgtatatgtgcttttataagagataaaagacctaaacgaaaaa----aataaagataaaggaccaaagtgttacaaataaataagaaaaaggacctct 31311861  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  31311860 aatgtaatcatgtct 31311846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 8850043 - 8849934
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| |||||||        |||||||||||| ||||||| ||||| ||||||||||||||||  ||||||    
T  8850043 gatgtatatgtgcttttataagagataaaagacttaagcggaaaaa---aataaagataaaagacccaaatgtaataaataaataagataaa--atctct 8849949  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  8849948 aatgtaatcatgtct 8849934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 37178523 - 37178412
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||| | | ||||||||||||||| |||        ||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  37178523 gatgtatatgtgcttttgtgaaagataaaagacctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaaggacctct 37178427  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  37178426 aatgtaatcatgtct 37178412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 38698580 - 38698691
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||| | |||||| |||||||||||||||||| || ||||    
T  38698580 gatgtatatgtgcttttataagagataaaagacctaaacgaaaaaa---aataaagataaaggatcaaagtgttacaaataaataagataaatgacctct 38698676  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  38698677 aatgtaatcatgtct 38698691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 51721147 - 51721035
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| |||        |||||||||||||| || |||| | |||||||| |||||||||||| ||||    
T  51721147 gatgtatatgtgcttttataagagataaaagacctaaacggaaaaaa--aataaagataaagggccaaagttttacaaataagtaagataaaggacctct 51721050  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  51721049 aatgtaatcatgtct 51721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 40424616 - 40424707
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||||||||||||||||||||||| |||        ||||||||||||||||| |||||| |||||||||||||||||||||    
T  40424616 gatgtatacgtgcttttataagagataaaagacctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaagga 40424707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 53776690 - 53776588
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||| | |          ||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  53776690 gatgtatatgtgcttttatgagagataaaagacctgaac-----aaaaaaataaagataaaggaccaaagtgttacaaataaataagataaaggacctct 53776596  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  53776595 aatgtaat 53776588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 50536199 - 50536134
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||||   ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  50536199 aataaagataaaggattaaagtgttgcaaataaataagataaaggatctctaatgtaatcatgtct 50536134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 3891068 - 3890955
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||| ||||||||||||| |||||||||||||| ||  ||        ||||||||||||||||| |||||| |||||||||||||||||| || || ||    
T  3891068 atgtgtatgtgcttttatgagagataaaagaccaaaatggaaaaaaaaaataaagataaaggaccaaagtgttacaaataaataagataaaagacctata 3890969  T
Q  213 atgtaatcatgtct 226  Q
    |||||||| |||||    
T  3890968 atgtaatcctgtct 3890955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 55219697 - 55219756
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||||    
T  55219697 aataaagataaaagaccaaagtgttacaaataaataagataaagaatctctaatgtaatc 55219756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 40907909 - 40907989
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataag 198  Q
    |||||||||||||||||||||||||||||||||  |||||         ||||||||||||||||||||||||||||||||||||||    
T  40907909 gatgtatatgtgcttttataagagataaaagac--aagcgaaaaa----aataaagataaaggacccaagtgtaacaaataaataag 40907989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 42826988 - 42826930
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||    
T  42826988 aataaagataaaagaccaaagtgttacaaataaataagataaaggatccctaatgtaat 42826930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 55412944 - 55413049
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| |||||||||||||  ||||||        ||||||||||||||||| || ||| |||||||||||||||||| || || |    
T  55412944 gatgtatatgtgcttttatgagagataaaagactgaagcggaaaaaa--aataaagataaaggaccaaaatgttacaaataaataagataaatgaactgt 55413041  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  55413042 aatgtaat 55413049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 29894592 - 29894636
Alignment:
Q  182 tgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  29894592 tgtaacaaataaataaaataaaggatctctaatgtaatcatgtct 29894636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 31312678 - 31312737
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |  ||||||||||    
T  31312678 aataaagataaaggaccaaagtgttacaaataaataagataaaggacccataatgtaatc 31312737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 44841486 - 44841447
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcg 151  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44841486 gatgtatatgtgcttttataagagataaaagacctaagcg 44841447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 51721855 - 51721914
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |  ||||||||||    
T  51721855 aataaagataaaggaccaaagtgttacaaataaataagataaaggacccataatgtaatc 51721914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 2219033 - 2218929
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  2219033 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 2218937  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  2218936 aatgtaat 2218929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 16009835 - 16009731
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  16009835 gatgtatatgtgcttttaagagagataaatgacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 16009739  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  16009738 aatgtaat 16009731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 27127224 - 27127120
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  27127224 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 27127128  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  27127127 aatgtaat 27127120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 30362650 - 30362708
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| | ||||||||||    
T  30362650 aataaagataaaggatcaaagtgttacaaataaataagataaaggacccctaatgtaat 30362708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 41697098 - 41697185
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||||||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||    
T  41697098 gatgtatatgtgcttttaagagagataaaagacctaaacggaaaa----aataaagacaaaggaccaaagtgttacaaataaataagataaa 41697185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 50547530 - 50547588
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||  |||||||||    
T  50547530 aataaagacaaaggaccaaagtgttacaaataaataagataaaggatccataatgtaat 50547588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 30042492 - 30042583
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||||||||||||| |||||||||| ||||||| |||        |||||||| |||||||| ||| || |||||||||||||||||||||    
T  30042492 gatgtatatgtgcttttaaaagagataaaggacctaaacggaaaaa---aataaagacaaaggaccaaagagttacaaataaataagataaagga 30042583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 10825994 - 10825943
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||| |||| |||||| |||||||||||| ||||||||||||||    
T  10825994 aataaagataaatgaccaaagtgttacaaataaataaaataaaggatctcta 10825943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 29835479 - 29835530
Alignment:
Q  168 ataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||| ||||    
T  29835479 ataaaggaccaaagtgttacaaataaataagataaaggacctctaatataat 29835530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 37181041 - 37181100
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| | ||||||||||||||||||| | |||||||||||    
T  37181041 aataaagataaaggatcaaagtgttaaaaataaataagataaaggacccctaatgtaatc 37181100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 42827761 - 42827868
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||  |||||||| |||| |||||| | ||||||||||||||   |||||||    
T  42827761 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaa----aaagaagataaatgaccaaagtgttaaaaataaataagata---gatctct 42827853  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  42827854 aatgtaatcctgtct 42827868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 4231926 - 4232014
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||    
T  4231926 gatgtatatgtgcttttaagagagataaatgacctaaacggaaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaa 4232014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 16464919 - 16464861
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  16464919 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 16464861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 22427972 - 22428030
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||| |||||| ||||| |||| | ||||||||||||||||||||||| ||||||||||    
T  22427972 aatatagataacggaccaaagtattacaaataaataagataaaggatccctaatgtaat 22428030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 23020787 - 23020729
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  23020787 aataaagacaaaggaccaaagtgttacaaataaataagataaaggaccaataatgtaat 23020729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 27330924 - 27331028
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||| | |||||| |||||||||||| ||||||||||  |    
T  27330924 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggatcaaagtgttacaaataaataaaataaaggatccat 27331020  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  27331021 aatgtaat 27331028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30361929 - 30361822
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagat-aaaggacccaagtgtaacaaataaataagataaaggatctc 210  Q
    ||||||||||||||||||| ||||||||||||||||| |||        || ||| || |||||||| |||| | |||||||||||||||||| || |||    
T  30361929 gatgtatatgtgcttttatgagagataaaagacctaaacgg--------aaaaaaaataaaaggaccaaagtattacaaataaataagataaatgacctc 30361838  T
Q  211 taatgtaatcatgtct 226  Q
    ||||| |||| |||||    
T  30361837 taatggaatcgtgtct 30361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 53777369 - 53777473
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||| |||||||||||  ||||||||| |||||||||||        |||||||||||| |||| || ||| ||||||||||||||||| ||| | ||    
T  53777369 gatgtacatgtgcttttaagagagataaaggacctaagcgggaaaa---aataaagataaatgaccaaaatgttacaaataaataagataatggacccct 53777465  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  53777466 aatgtaat 53777473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 27328146 - 27328101
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  27328146 aataaagacaaaggaccaaagtgttacaaataaataagataaagga 27328101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 33213802 - 33213749
Alignment:
Q  166 agataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||| |||||| |||||||||||||||||| || ||||||| ||||    
T  33213802 agataaaggaccaaagtgttacaaataaataagataaaagacctctaatataat 33213749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 44842245 - 44842290
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  44842245 aataaagacaaaggaccaaagtgttacaaataaataagataaagga 44842290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 2584424 - 2584388
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaa 148  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2584424 gatgtatatgtgcttttatgagagataaaagacctaa 2584388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 40908337 - 40908368
Alignment:
Q  195 taagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||||||||||||||||||    
T  40908337 taagataaaggatctctaatgtaatcatgtct 40908368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 18762933 - 18762875
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||||||| ||| | |||||| ||||||||||||||||||||| |  |||||||||    
T  18762933 aataaagataatggatcaaagtgttacaaataaataagataaaggacccataatgtaat 18762875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 37219249 - 37219291
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  37219249 aataaagacaaaggaccaaagtgttacaaataaataagataaa 37219291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 43339357 - 43339315
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  43339357 aataaagataaatgaccaaagtgttacaaataaataagataaa 43339315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 45052766 - 45052824
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| | |||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  45052766 aataaagacagaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 45052824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 52746364 - 52746422
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| ||||| || |||||| ||||||||||||||||||||| |  |||||||||    
T  52746364 aataaagacaaaggcccaaagtgttacaaataaataagataaaggacccataatgtaat 52746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 41102671 - 41102626
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| ||||||||||||| |||||||    
T  41102671 aataaagacaaaggaccaaagtgttacaaataaataagctaaagga 41102626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 45170991 - 45170946
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| ||| |||| |||||| |||||||||||||||||||||    
T  45170991 aataaagacaaatgaccaaagtgttacaaataaataagataaagga 45170946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 953944 - 953834
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  953944 gatgtatatgtgcttttataagagataaaagacctaagcggaaaa----aataaagataaaggacctaagtgtaacaaataaataagataaaggacctct 953849  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  953848 aatgtaatcatgtct 953834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 16922025 - 16922136
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        || ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16922025 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aagaaagataaaagacccaagtgtaacaaataaataagataaaggatctct 16922121  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  16922122 aatgtaatcatgtct 16922136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 27784206 - 27784313
Alignment:
Q  116 tatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatg 215  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27784206 tatatgtgcttttataagagataaaagacctaaacggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatg 27784302  T
Q  216 taatcatgtct 226  Q
    |||||||||||    
T  27784303 taatcatgtct 27784313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 4588154 - 4588045
Alignment:
Q  114 tgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaa 213  Q
    ||||||||||||||||||||||||||||||||| || |         |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4588154 tgtatatgtgcttttataagagataaaagacctgagtgaaaata---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaa 4588058  T
Q  214 tgtaatcatgtct 226  Q
    |||||||||||||    
T  4588057 tgtaatcatgtct 4588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 17557867 - 17557760
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||| ||||||||||||||||||||| |||| |||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17557867 gatgtatatgggcttttataagagataaaagatctaaacggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 17557771  T
Q  212 aatgtaatcat 222  Q
    |||||||||||    
T  17557770 aatgtaatcat 17557760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 23581989 - 23582101
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||| |||||||| | |        ||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  23581989 gatgtatatgtgcttttataagagataatagacctaaacagaaaaaa--aataaagataaaggaccaaagtgtaacaaataaataagataaatgatctct 23582086  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  23582087 aatgtaatcatgtct 23582101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 14105715 - 14105826
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaa-gacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctc 210  Q
    ||||||||| |||||||||||||||||||| |||||||||||        |||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  14105715 gatgtatatatgcttttataagagataaaaagacctaagcggaaaa----aataaagataaaggactcaagtgtaacaaataaatgagataaatgatctc 14105810  T
Q  211 taatgtaatcatgtct 226  Q
    ||||||||||||||||    
T  14105811 taatgtaatcatgtct 14105826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 5686629 - 5686518
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||| |||||||||||||||||||||||||||||||||||        || ||| ||||||||||||| |||||||||||||||||||||| || ||||    
T  5686629 gatgtgtatgtgcttttataagagataaaagacctaagcggaaaaa---aaaaaatataaaggacccaaatgtaacaaataaataagataaaagacctct 5686533  T
Q  212 aatgtaatcatgtct 226  Q
    ||| |||||||||||    
T  5686532 aatataatcatgtct 5686518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 24084342 - 24084455
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||| |||||||||||||| ||||||||||||||||| |||        ||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  24084342 gatgcatatgtgcttttatgagagataaaagacctaaacggaaaaaaa-aataaagataaaggaccaaagtgttacaaataaataagataaaggacctct 24084440  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  24084441 aatgtaatcttgtct 24084455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 28580224 - 28580336
Alignment:
Q  114 tgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaa 213  Q
    |||||||||| |||||||||||||||||||||||| |||         |||||||||||||||| |||||| |||||||||||||||| ||||  |||||    
T  28580224 tgtatatgtgtttttataagagataaaagacctaaacggaaaaaaaatataaagataaaggaccaaagtgttacaaataaataagatagaggacatctaa 28580323  T
Q  214 tgtaatcatgtct 226  Q
    |||||||||||||    
T  28580324 tgtaatcatgtct 28580336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 15287750 - 15287641
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| |||||||||||| |||| |||        |||||||||||| || | |||||| |||||||||||||||||| || ||||    
T  15287750 gatgtatatgtgcttttatgagagataaaagagctaaacggaaaa----aataaagataaatgatcaaagtgttacaaataaataagataaa-gacctct 15287656  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  15287655 aatgtaatcttgtct 15287641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 25120422 - 25120533
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||| ||||||||||||||||||||||||||| ||         ||||||||||||||| | |||||| |||||||||||||| |||| |  |||    
T  25120422 gatgtatatttgcttttataagagataaaagacctaaacgaaaaaa---aataaagataaaggaacaaagtgttacaaataaataagaaaaagaacttct 25120518  T
Q  212 aatgtaatcatgtct 226  Q
    |||||| ||||||||    
T  25120519 aatgtagtcatgtct 25120533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 1090388 - 1090492
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||||||||||| | |        |||||||||||| || | |||||| ||||||||||||||||||||| | ||    
T  1090388 gatgtatatgtgcttttaagagagataaaagacctaaacaggaaaa---aataaagataaaagatcaaagtgttacaaataaataagataaaggacccct 1090484  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  1090485 aatgtaat 1090492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 11152880 - 11152843
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaag 149  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11152880 gatgtatatgtgcttttataagagataaaagacctaag 11152843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 11153736 - 11153781
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  11153736 aataaagataaaggaccaaagtgttacaaataaataagataaagga 11153781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 15288113 - 15288206
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatc 208  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||||||| || | |||||| |||||||||||||||||||||||    
T  15288113 gatgtatatgtgcttttaagagagataaaggacctaaacgggacaa---aataaagataaaagatcaaagtgttacaaataaataagataaaggatc 15288206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 954681 - 954723
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  954681 aataaagataaaggaccaaagtgttacaaataaataagataaa 954723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 4588898 - 4588986
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||    
T  4588898 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaa 4588986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 5687361 - 5687419
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||| |  |||||||||    
T  5687361 aataaagataaaggactaaagtgttacaaataaataagataaaggacccataatgtaat 5687419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 27783437 - 27783379
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  27783437 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 27783379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 23574081 - 23573990
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| || ||| |||||||||||||||||||||    
T  23574081 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaaatgttacaaataaataagataaagga 23573990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 25119667 - 25119608
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||| |||| |||||| |||||||||||||||||| || |  ||||||||||    
T  25119667 aataaagataaatgaccaaagtgttacaaataaataagataaatgacccataatgtaatc 25119608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 14104952 - 14104894
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| | ||||||||||||||||||| |  |||||||||    
T  14104952 aataaagacaaaggaccaaagtgttataaataaataagataaaggacccataatgtaat 14104894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 18864655 - 18864601
Alignment:
Q  165 aagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||  |||||| |||||||||||||||||| | |||||||||||||    
T  18864655 aagataaatgacttaagtgttacaaataaataagataaaaggtctctaatgtaat 18864601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 944793 - 944845
Alignment:
Q  166 agataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||| |||| |||||| |||||||||||||||||| || ||||||||||||    
T  944793 agataaaagaccaaagtgtcacaaataaataagataaatga-ctctaatgtaat 944845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 21860438 - 21860503
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||| |  | |||||| ||||||||||||||||| ||| | ||||||||||| |||||    
T  21860438 aataaagataaatggtcaaagtgttacaaataaataagataatggacccctaatgtaatcttgtct 21860503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 9593609 - 9593721
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9593609 gatgtatatgtgcttttataagagataaaagacctaagccgaaaaaa--aataaagataaaggactcaagtgtaacaaataaataagataaaggatctct 9593706  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  9593707 aatgtaatcatgtct 9593721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 12501189 - 12501300
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  12501189 gatgtatatgtgcttttataagagataaaagacctaagcgggaaaa---aataaagataaaggactcaaatgtaacaaataaataagataaaagatctct 12501285  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  12501286 aatgtaatcatgtct 12501300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 19666404 - 19666515
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  19666404 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaatgactcaagtgtaacaaataaataagataaatgatctct 19666500  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  19666501 aatgtaatcatgtct 19666515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 39590493 - 39590604
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39590493 gatgtatatgtgcttttataagagataaaagacctaagtgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataaaataaaggatctct 39590589  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  39590590 aatgtaatcatgtct 39590604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 42610198 - 42610087
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42610198 gatgtatatgtgcttttataagagataaaagacctaagtgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataaaataaaggatctct 42610102  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  42610101 aatgtaatcatgtct 42610087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 744366 - 744259
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||        |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  744366 gatgtatatgtgcttttataatagataaaagacctaagcggaaaaa---aataaagataaaagacccaagtgtaacaaataaataagataatggatctct 744270  T
Q  212 aatgtaatcat 222  Q
    |||||||||||    
T  744269 aatgtaatcat 744259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 823111 - 823000
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| | |        |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  823111 gatgtatatgtgcttttataagagataaaagacctaaacagaaaaa---aataaagataaaagaccaaagtgtaacaaataaataagataaaggatctct 823015  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  823014 aatgtaatcatgtct 823000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30128909 - 30128798
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||| |||||||| |         ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30128909 gatgtatatgtgcttttataagagataaatgacctaagtgaaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaatgatctct 30128813  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  30128812 aatgtaatcatgtct 30128798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 37272497 - 37272611
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| |||||| |||||||||||||||||| || ||||    
T  37272497 gatgtatatgtgcttttataagagataaaagacctaaacggaaaaaaaaaataaagataaaggaccaaagtgttacaaataaataagataaatgacctct 37272596  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  37272597 aatgtaatcatgtct 37272611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 27018415 - 27018304
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||| || ||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  27018415 gatgtttaagtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatctcc 27018319  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  27018318 aatgtaatcatgtct 27018304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 37938776 - 37938666
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||| ||||||||||||||||||||||||||        ||||||||||||| || |||||||||||||||||||||||||| ||||| |    
T  37938776 gatgtatatgtgctcttataagagataaaagacctaagcggaaaaa---aataaagataaag-actcaagtgtaacaaataaataagataaaagatcttt 37938681  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  37938680 aatgtaatcatgtct 37938666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 20544482 - 20544374
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||   ||        ||||||||||||||||| || |||||||||||||||||||||| |||||||    
T  20544482 gatgtatatgtgcttttataagagataaaagacctacatggaaaa----aataaagataaaggacctaaatgtaacaaataaataagataaaagatctct 20544387  T
Q  212 aatgtaatcatgt 224  Q
    |||||||||||||    
T  20544386 aatgtaatcatgt 20544374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 9985650 - 9985539
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||||||| || ||| |||||||||||||||||| || ||||    
T  9985650 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataaaggaccaaaatgttacaaataaataagataaaagacctct 9985554  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  9985553 aatgtaatcatgtct 9985539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 19504835 - 19504947
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaa-gacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctc 210  Q
    |||||||||||| ||||||||||||||||| |||||||||||        |||||||||||||| || |||||||||||||||||| | ||||||| |||    
T  19504835 gatgtatatgtgtttttataagagataaaaagacctaagcggaaaaa---aataaagataaagggccaaagtgtaacaaataaatatgttaaaggacctc 19504931  T
Q  211 taatgtaatcatgtct 226  Q
    ||||||||||||||||    
T  19504932 taatgtaatcatgtct 19504947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 11986378 - 11986489
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||| |||||||||||||||||||||||||||||||| ||         |||||||||||| ||||||| || |||||||||||||||||||||| || |    
T  11986378 gatgcatatgtgcttttataagagataaaagacctaaacgaaaaaa---aataaagataaatgacccaaatgcaacaaataaataagataaaggaacttt 11986474  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  11986475 aatgtaatcatgtct 11986489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 31547755 - 31547644
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||| ||| ||||||||||||||||| | |        |||||||||||| |||| |||||| ||||||||||||||||||||| ||||    
T  31547755 gatgtatatgtgcttctatgagagataaaagacctaaacagaaaaa---aataaagataaaagaccaaagtgttacaaataaataagataaaggacctct 31547659  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  31547658 aatgtaatcatgtct 31547644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 7179953 - 7179849
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||  ||| |||||| |||||||||||||||||| || ||||    
T  7179953 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataaataaccaaagtgttacaaataaataagataaaagacctct 7179857  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  7179856 aatgtaat 7179849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 11078217 - 11078327
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||| |||||||||| |||||| |||        ||||||||||||||||| || ||| | |||||||||||||||| || |||||    
T  11078217 atgtatatgtgcttttatgagagataaaaaacctaaacggaaaaa---aataaagataaaggaccaaaatgttataaataaataagataaaagacctcta 11078313  T
Q  213 atgtaatcatgtct 226  Q
    |||||||| |||||    
T  11078314 atgtaatcttgtct 11078327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 34401976 - 34402055
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaa 194  Q
    ||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||| |||||| |||||||||    
T  34401976 gatgtatatgtgcttttataagagataaaagacctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaa 34402055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 13304496 - 13304555
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||||  ||||||||||    
T  13304496 aataaagataaaggaccaaagtgttacaaataaataagataaatgatccataatgtaatc 13304555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 27551758 - 27551699
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| | |||||||||||    
T  27551758 aataaagataaaggatcaaagtgttacaaataaataagataaaggacccctaatgtaatc 27551699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 9592821 - 9592717
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  9592821 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 9592725  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  9592724 aatgtaat 9592717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 11985669 - 11985581
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        ||||||||||||||||| |||||| ||||||||||||||||||    
T  11985669 gatgtatatgtgcttttaagagagataaatgacctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaa 11985581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 37271749 - 37271705
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagg 205  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  37271749 aataaagataaaggaccaaagtgttacaaataaataagataaagg 37271705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 7180709 - 7180768
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| | | |||||||||    
T  7180709 aataaagataaaggatcaaagtgttacaaataaataagataaaggacccccaatgtaatc 7180768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 12500375 - 12500317
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  12500375 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 12500317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 27019171 - 27019229
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  27019171 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 27019229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 37939539 - 37939597
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  37939539 aataaagacaaaggaccaaagtgttacaaataaataagataaaggaaccataatgtaat 37939597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 30129949 - 30130040
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||||| | |||| |||||| |||||||||||||||||||||    
T  30129949 gatgtatatgtgcttttaagagagataaatgacctaaacgggaaaa---aataaagatatatgaccaaagtgttacaaataaataagataaagga 30130040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 31551195 - 31551255
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatct-ctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||||| ||||||||||||||| || |||||||||||    
T  31551195 aataaagataaaggatcaaagtgttacaaacaaataagataaaggacctcctaatgtaatc 31551255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 9986387 - 9986442
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgt 216  Q
    |||||||||||| || | |||||| ||||||||||||||||||||| | |||||||    
T  9986387 aataaagataaaagatcaaagtgttacaaataaataagataaaggacccctaatgt 9986442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 15421318 - 15421276
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||| |||||||| |||||| ||||||||||||||||||    
T  15421318 aataaagacaaaggaccaaagtgttacaaataaataagataaa 15421276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 744644 - 744689
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| ||| |||| |||||| |||||||||||||||||||||    
T  744644 aataaagacaaatgaccaaagtgttacaaataaataagataaagga 744689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 31480847 - 31480794
Alignment:
Q  166 agataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| ||  |||||| ||||||||||||||||||||| ||||||| ||||    
T  31480847 agataaagaactaaagtgttacaaataaataagataaaggacctctaatataat 31480794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 27552484 - 27552520
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaa 148  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  27552484 gatgtatatgtgcttctatgagagataaaagacctaa 27552520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 30838050 - 30837940
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  30838050 gatgtatatgtgcttttataagagataaaagacctaagcggaaaa----aataaagataaaagactcaagtgtaacaaataaataagataaaggatctct 30837955  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  30837954 aatgtaatcatgtct 30837940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 31031844 - 31031955
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31031844 gatgtatatgtgcttttataagagataaaagacctgagcgggaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaaagatctct 31031940  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  31031941 aatgtaatcatgtct 31031955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 33706333 - 33706444
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  33706333 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaagacccaagtgtaataaataaataagataaaggatctct 33706429  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  33706430 aatgtaatcatgtct 33706444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 21097160 - 21097268
Alignment:
Q  116 tatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatg 215  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  21097160 tatatgtgcttttataagagataaaagacctaagcggaaaaaa--aataaagataaaggacccaagtgtaacaaataaataagataaaagacctctaatg 21097257  T
Q  216 taatcatgtct 226  Q
    |||||||||||    
T  21097258 taatcatgtct 21097268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 7154626 - 7154737
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||| ||||||        |||||||||||| |||||||||||||||||||||||||||||| ||||||     
T  7154626 gatgtatatgtgcttttataagagataaaagaccaaagcggaaaaa---aataaagataaatgacccaagtgtaacaaataaataagataaaagatctca 7154722  T
Q  212 aatgtaatcatgtct 226  Q
     ||||||||||||||    
T  7154723 tatgtaatcatgtct 7154737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 14535643 - 14535533
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||| | ||| |||    
T  14535643 gatgtatatgtgcttttataagagataaaagacctaagcggaaaa----aataaagataaaggacccatgtgtaacaaataaataagatatatgatttct 14535548  T
Q  212 aatgtaatcatgtct 226  Q
    || ||||||||||||    
T  14535547 aacgtaatcatgtct 14535533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 44510712 - 44510601
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| |||| ||||||| |||||||||||||| ||||||     
T  44510712 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggatccaaatgtaacatataaataagataaatgatctcc 44510616  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  44510615 aatgtaatcatgtct 44510601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 51088404 - 51088515
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||| ||||||||||||||||||||| |||        ||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  51088404 gatgtatatgtgcttatataagagataaaagacctaaacggaaaaa---aataaagataaaggaccaaagtgttacaaataaataagataaaagatctct 51088500  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  51088501 aatgtaatcatgtct 51088515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 10774508 - 10774601
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatc 208  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  10774508 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaaagatc 10774601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 7557287 - 7557400
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| | |        ||||||||||||||||| || ||| |||||||||||||| |||||| ||||    
T  7557287 gatgtatatgtgcttttataagagataaaagacctaaacagaaaaaaa-aataaagataaaggaccaaaatgttacaaataaataagaaaaaggacctct 7557385  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  7557386 aatgtaatcatgtct 7557400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 29647863 - 29647759
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||| ||||||||||||| |||       |||||||||||||||| | ||| || | ||||||||||||||||||| ||||    
T  29647863 gatgtatatgtgcttttataagatataaaagacctaaacggaaaa---taataaagataaaggatcaaagggttaaaaataaataagataaaggacctct 29647767  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  29647766 aatgtaat 29647759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 36732307 - 36732372
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||    
T  36732307 aataaagataaaggaccaaagttttacaaataaataagataaaggacctctaatgtaatcatgtct 36732372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 35956085 - 35956194
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||||||||||||||||||||| ||         |||||||||||| |||| |||| | | |||||||||||||||| || |||||    
T  35956085 atgtatatgtgcttttataagagataaaagacctaaacgaaaaa----aataaagataaatgaccaaagttttagaaataaataagataaatgacctcta 35956180  T
Q  213 atgtaatcatgtct 226  Q
    ||||||||||||||    
T  35956181 atgtaatcatgtct 35956194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 30301290 - 30301185
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        ||||||||||||||||| | |||| ||||||||||||||||||| | || |    
T  30301290 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataaaggaccaacgtgttacaaataaataagataaagaacctat 30301194  T
Q  212 aatgtaatc 220  Q
    |||||||||    
T  30301193 aatgtaatc 30301185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 29520471 - 29520406
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||| ||| |||||| |||||||||||||||||| || |||||||||||||||||||    
T  29520471 aataaagataaagcaccaaagtgttacaaataaataagataaatgagctctaatgtaatcatgtct 29520406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 51087702 - 51087644
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||  |||||||||    
T  51087702 aataaagataaaggatcaaagtgtaacaaataaataagataaaggatccataatgtaat 51087644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 12769396 - 12769505
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        |||||||||||| || | |||||  |||||||||| |||||||||| ||||    
T  12769396 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaa----aataaagataaaaga-caaagtgctacaaataaattagataaaggacctct 12769490  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  12769491 aatgtaatcttgtct 12769505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 25657561 - 25657671
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||| |||||||||||| |||| |||        ||||||||||||||| | |||||| | ||||||||||||||||  | |||||    
T  25657561 atgtatatgtgcttttatgagagataaaagatctaaacggaaaaa---aataaagataaaggatcaaagtgttataaataaataagataaaaaacctcta 25657657  T
Q  213 atgtaatcatgtct 226  Q
    |||||||| |||||    
T  25657658 atgtaatcgtgtct 25657671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 25656822 - 25656763
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| | |||||||||||    
T  25656822 aataaagataaaggatcaaagtgttacaaataaataagataaaggacccctaatgtaatc 25656763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 10773754 - 10773650
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  10773754 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 10773658  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  10773657 aatgtaat 10773650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 33005431 - 33005535
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    ||||| |||||||||||  ||||||||| |||||||||||        |||||| |||||||||| |||||| ||||||||||||||||| ||| | |||    
T  33005431 atgtacatgtgcttttaagagagataaaggacctaagcgggaaaa---aataaaaataaaggaccaaagtgttacaaataaataagataatggaacccta 33005527  T
Q  213 atgtaatc 220  Q
    ||||||||    
T  33005528 atgtaatc 33005535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 48129445 - 48129485
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcgg 152  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  48129445 gatgtatttgtgcttttataagagataaaagacctaagcgg 48129485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 29648595 - 29648654
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||| ||| |||||| |||| |||||||||||||||| | |||||||||||    
T  29648595 aataaagataaagaaccaaagtgttacaactaaataagataaaggacccctaatgtaatc 29648654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 33004754 - 33004651
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||| |  |         |||||||||||| |||  |||||| | ||||||||||||||||||| ||||    
T  33004754 gatgtatatgtgcttttatgagagataaaagacctgaatg----aaaaaaataaagataaaagacaaaagtgttaaaaataaataagataaaggacctct 33004659  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  33004658 aatgtaat 33004651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 35955399 - 35955341
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||| |  |||||||||    
T  35955399 aataaagataaaggaccaaagtgttacatataaataagataaaggacccataatgtaat 35955341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 44511461 - 44511519
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||| |  |||||||||    
T  44511461 aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccataatgtaat 44511519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 47035961 - 47036014
Alignment:
Q  166 agataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    ||||||| |||| |||||| ||||||||||||||||||||| ||||||| ||||    
T  47035961 agataaacgaccaaagtgttacaaataaataagataaaggacctctaatataat 47036014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 7153943 - 7153857
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagata 201  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||    
T  7153943 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagata 7153857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 34334168 - 34334207
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  34334168 aaagataaaggaccaaagtgttacaaataaataagataaa 34334207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 46464109 - 46464050
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||| |||||||||| |||||| |||||||||||||||||  || | |||||||||||    
T  46464109 aataaatataaaggaccaaagtgttacaaataaataagataatagacccctaatgtaatc 46464050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 33705577 - 33705519
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||| |  |||||||||    
T  33705577 aataaagacaaaggaccaaagtgttacaaataaatacgataaaggacccataatgtaat 33705519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 46119195 - 46119161
Alignment:
Q  186 acaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||||||||||| |||||||||||    
T  46119195 acaaataaataagataaaggatccctaatgtaatc 46119161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 7557002 - 7556961
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataa 202  Q
    ||||||||| ||||||| |||||| |||||||||||||||||    
T  7557002 aataaagattaaggaccaaagtgttacaaataaataagataa 7556961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 29520516 - 29520488
Alignment:
Q  113 atgtatatgtgcttttataagagataaaa 141  Q
    |||||||||||||||||||||||||||||    
T  29520516 atgtatatgtgcttttataagagataaaa 29520488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 4737004 - 4736895
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4737004 gatgtatatgttcttttataagagataaaagacctaagcggaaa-----aataaagataaatgacccaaatgtaacaaataaataagataaaggatctct 4736910  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  4736909 aatgtaatcatgtct 4736895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 25761444 - 25761333
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  25761444 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggaccaaagtgtaacaaataaataagataaaggacctct 25761348  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||| |||||||    
T  25761347 aatgtaaccatgtct 25761333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 38280552 - 38280441
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||| ||||||        |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  38280552 gatgtatatgtgcttttataagagataaaagaccaaagcggaaaaa---aataaagataaatgacccaagtgtaacaaataaataagataaatgatctct 38280456  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  38280455 aatgtaatcatgtct 38280441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 3905200 - 3905089
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||| |||||      
T  3905200 gatgtatatgtgcttttataagagataaaagacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatcttc 3905104  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  3905103 aatgtaatcatgtct 3905089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 14004306 - 14004195
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||| ||||||||||        |||||||||||||||||||| |||||||||||||||||||||| ||||||     
T  14004306 gatgtatatgtgcttttataagagataaaatacctaagcggaaaaa---aataaagataaaggacccaaatgtaacaaataaataagataaatgatctcc 14004210  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  14004209 aatgtaatcatgtct 14004195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 15154289 - 15154400
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  15154289 gatgtatatgtgcttttataagagataaaagacctaaacgaaaaaa---aataaagataaaggatccaagtgtaacaaataaataagataaaggacctct 15154385  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||| ||||    
T  15154386 aatgtaatcaagtct 15154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 25225166 - 25225276
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||||||||||||||||||||||||| |||||||         |||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  25225166 gatgtatatgtgcttttataagagataaaagatctaagcgaaaaa----aataaagataaaagacccaagtgtaaaaaataaataagataaaagatctct 25225261  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  25225262 aatgtaatcatgtct 25225276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 75866 - 75754
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  75866 atgtatatgtgcttttataagagataaaagacctaagc---aaaaaataataaagataaaagacccaagtgtaacaaataaataagataaatgatctcta 75770  T
Q  213 --atgtaatcatgtct 226  Q
      ||||||||||||||    
T  75769 atatgtaatcatgtct 75754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 2290682 - 2290571
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||||| |||||| |||||||||| ||||||| |||||||    
T  2290682 gatgtatatgtgcttttataagagataaaagacctaaacgaaaaaa---aataaagataaaggaccaaagtgttacaaataaattagataaaagatctct 2290586  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  2290585 aatgtaatcatgtct 2290571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 1053427 - 1053318
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||||||||||||||||| ||| |||        |||||||||||||||| ||| ||||||||| ||||||||||||||| |||     
T  1053427 gatgtatatgtgcttttataagagataaaagacataaacggaaaaaa--aataaagataaaggactcaaatgtaacaaagaaataagataaaggacctca 1053330  T
Q  212 aatgtaatcatg 223  Q
    ||||||||||||    
T  1053329 aatgtaatcatg 1053318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 39067329 - 39067221
Alignment:
Q  114 tgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaa 213  Q
    ||||||||||||||||||||||||||||||||||| |          ||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  39067329 tgtatatgtgcttttataagagataaaagacctaaac----aaaaaaaataaagataaaggaccaaaatgttacaaataaataagataaaggatctctaa 39067234  T
Q  214 tgtaatcatgtct 226  Q
    ||| || ||||||    
T  39067233 tgttataatgtct 39067221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 6647027 - 6647138
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||| |||||||||||| |||||||||||||||||  ||        ||||||||||||| ||| |||||| ||||||||||||||||||||| ||||    
T  6647027 gatgtacatgtgcttttatgagagataaaagacctaaatggaaaac---aataaagataaagaaccaaagtgttacaaataaataagataaaggacctct 6647123  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  6647124 aatgtaatcttgtct 6647138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 39068006 - 39068111
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        ||||||||||||||||| ||||||||||||||||||||||||| || || |    
T  39068006 gatgtatatgtgcttttaagagagataaatgacctaaacgggaaaa---aataaagataaaggaccaaagtgtaacaaataaataagataaatgacctat 39068102  T
Q  212 aatgtaatc 220  Q
    |||||||||    
T  39068103 aatgtaatc 39068111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 3753292 - 3753183
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| |||||||||||| |||| |||        |||||||||||| |||  |||||| ||||||||||||||||||||| ||||    
T  3753292 gatgtatatgtgcttttatgagagataaaagatctaaacggaaaa----aataaagataaaagaca-aagtgttacaaataaataagataaaggacctct 3753198  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  3753197 aatgtaatcttgtct 3753183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 42079147 - 42079038
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        |||||||||||| |||  |||||| |||||||||||||||||| || ||||    
T  42079147 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaa----aataaagataaaagaca-aagtgttacaaataaataagataaaagacctct 42079053  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  42079052 aatgtaatcttgtct 42079038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 39965444 - 39965404
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcgg 152  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39965444 gatgtatatgtgcttttataagagataaaagacctaagcgg 39965404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 7575406 - 7575509
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||| | |          ||||||||||||||||  |||||| |||||||||||||||||| || ||||    
T  7575406 gatgtatatgtgcttttatgagagataaaagacctgaac----aaaaaaaataaagataaaggactaaagtgttacaaataaataagataaaagacctct 7575501  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  7575502 aatgtaat 7575509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 27550662 - 27550721
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| | |||||||||||    
T  27550662 aataaagataaaggatcaaagtgttacaaataaataagataaaggacccctaatgtaatc 27550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 3753942 - 3754047
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||  ||||||||| ||||||| |||        |||||||||||||| || |||||| ||||||||||||||||| ||| | |||    
T  3753942 atgtatatgtgcttttaagagagataaaggacctaaacggggaaaa--aataaagataaagggccaaagtgttacaaataaataagataatggaccccta 3754039  T
Q  213 atgtaatc 220  Q
    ||||||||    
T  3754040 atgtaatc 3754047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 15400698 - 15400809
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcgg-nnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctc 210  Q
    ||||| ||||||||||||||||||||||||||||||| |||         |||||||||||| || | || ||| |||||||||||||| ||| || |||    
T  15400698 gatgtttatgtgcttttataagagataaaagacctaaacggaaaaaaaaaaataaagataaaagatcaaaatgttacaaataaataagaaaaatgacctc 15400797  T
Q  211 taatgtaatcat 222  Q
    ||||||||||||    
T  15400798 taatgtaatcat 15400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 27549969 - 27549865
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||| ||||||||||||| ||||||||||||||||| |||        |||||||||||| |||| ||||||  |||||||||||||||||| | ||||    
T  27549969 gatgtttatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataaaagaccaaagtgttgcaaataaataagataaagaacctct 27549873  T
Q  212 aatgtaat 219  Q
    | ||||||    
T  27549872 agtgtaat 27549865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 38281269 - 38281373
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||||| |  |    
T  38281269 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaaggacccat 38281365  T
Q  212 aatgtaat 219  Q
    ||||||||    
T  38281366 aatgtaat 38281373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 15153550 - 15153505
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  15153550 aataaagataaaggaccaaagtgttacaaataaataagataaagga 15153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 28390198 - 28390133
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||||||||||||| || ||| ||||||| |||||| ||| || |||||||||||||||||||    
T  28390198 aataaagataaaggaccaaattgttacaaatatataagaaaaatgacctctaatgtaatcatgtct 28390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 6646110 - 6645998
Alignment:
Q  113 atgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctcta 212  Q
    |||||||||||||||||  ||||||||| ||||||| |||        ||||||||||||||||| ||||||  |||||||||||||| |||||   |||    
T  6646110 atgtatatgtgcttttaagagagataaaggacctaaacggaaaaaaa-aataaagataaaggaccaaagtgttgcaaataaataagattaaggacgccta 6646012  T
Q  213 atgtaatcatgtct 226  Q
    |||||||| |||||    
T  6646011 atgtaatcttgtct 6645998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 3850848 - 3850907
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||||| || |||||| ||||||||||||||||| ||| | |||||||||||    
T  3850848 aataaagataaagggccaaagtgttacaaataaataagataatggacccctaatgtaatc 3850907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 1054144 - 1054232
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaa 203  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| |||||||| |||||| ||||||||||||||||||    
T  1054144 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaaggaccaaagtgttacaaataaataagataaa 1054232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 39965399 - 39965361
Alignment:
Q  188 aaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  39965399 aaataaataagataaaagatctctaatgtaatcatgtct 39965361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 76686 - 76731
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  76686 aataaagacaaaggaccaaagtgttacaaataaataagataaagga 76731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 3850059 - 3849951
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        |||||||||||| ||   |||||| ||||||||||||||| ||||| ||||    
T  3850059 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaa----aataaagataaaaga-taaagtgttacaaataaataagat-aaggacctct 3849966  T
Q  212 aatgtaatcatgtct 226  Q
    ||| ||||| |||||    
T  3849965 aatataatcttgtct 3849951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 37724513 - 37724604
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||||| ||| |||| |||||| |||||||||||||||||||||    
T  37724513 gatgtatatgtgcttttaagagagataaaggacctaaacgggaaaa---aataaagacaaatgaccaaagtgttacaaataaataagataaagga 37724604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 39966213 - 39966258
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  39966213 aataaagacaaaggaccaaagtgttacaaataaataagataaagga 39966258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 12522409 - 12522464
Alignment:
Q  164 aaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaat 219  Q
    |||||||||||||| |||||| | ||||||||||||||||||| | ||||| ||||    
T  12522409 aaagataaaggaccaaagtgttaaaaataaataagataaaggacccctaatttaat 12522464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 28391001 - 28391060
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||| ||  |||||| ||||||||||||||||||||| |  ||||||||||    
T  28391001 aataaagataaagtacaaaagtgttacaaataaataagataaaggacccataatgtaatc 28391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 39774235 - 39774294
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||||| |  |||||| ||||||||||||||||| ||| | |||||||||||    
T  39774235 aataaagataaagggctaaagtgttacaaataaataagataatggacccctaatgtaatc 39774294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 42079941 - 42080000
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    |||||||||||||| || |||||| ||||||||||||||||| ||| | |||||| ||||    
T  42079941 aataaagataaagggccaaagtgttacaaataaataagataatggacccctaatgcaatc 42080000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 15399975 - 15399930
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    ||||||||||||| | | |||||| |||||||||||||||||||||    
T  15399975 aataaagataaagaaacaaagtgttacaaataaataagataaagga 15399930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 39773535 - 39773506
Alignment:
Q  115 gtatatgtgcttttataagagataaaagac 144  Q
    ||||||||||||||||||||||||||||||    
T  39773535 gtatatgtgcttttataagagataaaagac 39773506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 2291352 - 2291412
Alignment:
Q  166 agataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatcatgtct 226  Q
    ||||||| |||| || ||| ||||||||||||||||||||| |  |||||||||| |||||    
T  2291352 agataaatgaccaaattgttacaaataaataagataaaggacccataatgtaatcttgtct 2291412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 148
Target Start/End: Original strand, 38408115 - 38408147
Alignment:
Q  116 tatatgtgcttttataagagataaaagacctaa 148  Q
    ||||||||||||||| |||||||||||||||||    
T  38408115 tatatgtgcttttatgagagataaaagacctaa 38408147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 56267 - 56378
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||| ||||||||||||||| ||||| ||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  56267 gatgtataagtgcttttataagagctaaaaaacctaagcggaaaaa---aataaagataaaggacccaagtgtaacaaataaataagataaatgatctct 56363  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  56364 aatgtaatcatgtct 56378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 55505 - 55460
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaagga 206  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  55505 aataaagacaaaggaccaaagtgttacaaataaataagataaagga 55460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 4152 - 4041
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||| ||||||||||||||||| |||        |||||||||||| |||| |||||| | |||||||||||||||| || ||||    
T  4152 gatgtatatgtgcttttatgagagataaaagacctaaacggaaaaa---aataaagataaaagaccaaagtgttataaataaataagataaaagacctct 4056  T
Q  212 aatgtaatcatgtct 226  Q
    |||||||||||||||    
T  4055 aatgtaatcatgtct 4041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 4866 - 4925
Alignment:
Q  161 aataaagataaaggacccaagtgtaacaaataaataagataaaggatctctaatgtaatc 220  Q
    ||||||||||||||| | |||||| |||||||||||||||||| || | |||||||||||    
T  4866 aataaagataaaggatcaaagtgttacaaataaataagataaatgacccctaatgtaatc 4925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 4490 - 4377
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    |||||||||| |||||||| ||||||||||||||||| | |        ||||||||||||||||| |||| | ||||||||||||||||||||| | ||    
T  4490 gatgtatatgggcttttatgagagataaaagacctaaacagaaaaaaa-aataaagataaaggaccaaagttttacaaataaataagataaaggaacact 4392  T
Q  212 aatgtaatcatgtct 226  Q
    ||||||||| |||||    
T  4391 aatgtaatcttgtct 4377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 4977 - 5082
Alignment:
Q  112 gatgtatatgtgcttttataagagataaaagacctaagcggnnnnnnntaataaagataaaggacccaagtgtaacaaataaataagataaaggatctct 211  Q
    ||||||||||||||||||  ||||||||| ||||||| |||        |||||| |||||||||  |||||| |||||||||||||||||| || | ||    
T  4977 gatgtatatgtgcttttaagagagataaaggacctaaacggaaaaa---aataaaaataaaggacgaaagtgttacaaataaataagataaaagacccct 5073  T
Q  212 aatgtaatc 220  Q
    |||||||||    
T  5074 aatgtaatc 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University