View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3637_low_10 (Length: 219)
Name: NF3637_low_10
Description: NF3637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3637_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 31352080 - 31352255
Alignment:
| Q |
35 |
ttagagtatttgattctttatgctatgagaacataccagatgctaagagaaataaattggaagacaagagtgaaccaattattctacatcatttttcttg |
134 |
Q |
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| T |
31352080 |
ttagagtatttgattctttatgctatgagaacataccagatgctaagagaaataaattggaagacaagagtgaaccaattattctacatcttttttcttg |
31352179 |
T |
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| Q |
135 |
aattgttgcattgaagcatttacaataattcatattgcattctcaatgactataatcgaaccctcttcacctttgc |
210 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31352180 |
aattgttgcattgaagcatttagaataattcatattgcattctcaatgactataatcgaaccctcttcacctttgc |
31352255 |
T |
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