View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3637_low_9 (Length: 240)
Name: NF3637_low_9
Description: NF3637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3637_low_9 |
 | |
|
| [»] scaffold0058 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0313 (2 HSPs) |
| | |
|
| [»] scaffold0254 (1 HSPs) |
| | |
|
| [»] scaffold0141 (1 HSPs) |
| | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0015 (1 HSPs) |
| | |
|
| [»] scaffold0028 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0529 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0058 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 53334 - 53562
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
53334 |
tctttgacatgagatgtaccctcatgatgtatttttaaggtatcccatacctctttagcattcttacattcatcaactctttcactttcttccatggtta |
53433 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
53434 |
atgcacatgatagaaagagtctagctttagaatttaacaatacctgagctttttcatctattgaccatgcactcttttctttgacagctccttctttggt |
53533 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
53534 |
tgttggaacaaagtctccatctgtgatga |
53562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 14892556 - 14892785
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
14892556 |
tctttgacatgagatgtaccctcatgatgtatttttaaggtatcccatacctctttatcattcttacattcatcaactctttcactttcttccatggtta |
14892655 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |
|
|
| T |
14892656 |
gtgcacatgatagaaagagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcacttttttctttgacagctccttctttggt |
14892755 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatgat |
230 |
Q |
| |
|
| |||||||||||||||||| |||||||| |
|
|
| T |
14892756 |
tgttggaacaaagtctccatatgtgatgat |
14892785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 21211774 - 21212002
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21211774 |
tctttgacatgagaagtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
21211873 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
21211874 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtt |
21211973 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
21211974 |
tgttggaacaaagtctccatttgtgatga |
21212002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 22832276 - 22832121
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||| ||||||||| || |||||||||| | |||| || |||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||||| |
|
|
| T |
22832276 |
tctttgatatgagatgtaccttcatgatgtactctcaaagtgtcccatacctctttggcatttttacactcatcaactctttcactttctttcatggtta |
22832177 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttca |
156 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
22832176 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttca |
22832121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 18233874 - 18233759
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| || |||||||| | |||||| || | |||||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
18233874 |
tcatgatgaatttttaacgtatcccaaatttcttttgccgtagtacattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
18233775 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
18233774 |
gagctttagagtttaa |
18233759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 18243325 - 18243210
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| || |||||||| | |||||| || | |||||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
18243325 |
tcatgatgaatttttaacgtatcccaaatttcttttgccgtagtacattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
18243226 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
18243225 |
gagctttagagtttaa |
18243210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 25036173 - 25036288
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||||||||| || |||||||| | |||||| || | || ||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
25036173 |
tcatgatgtatttttaatgtatcccaaatttcttttgccgtggtgcattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
25036272 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
25036273 |
gagctttagagtttaa |
25036288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 25050210 - 25050325
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||||||||| || |||||||| | |||||| || | || ||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
25050210 |
tcatgatgtatttttaatgtatcccaaatttcttttgccgtggtgcattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
25050309 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
25050310 |
gagctttagagtttaa |
25050325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 12916503 - 12916388
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| || |||||||| | |||||| || | || ||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
12916503 |
tcatgatgaatttttaacgtatcccaaatttcttttgccgtagtgcattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
12916404 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
12916403 |
gagctttagagtttaa |
12916388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9544044 - 9544272
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9544044 |
tctttgacatgagatgtaccctcatgatgtattttcagggtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
9544143 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
9544144 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
9544243 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
9544244 |
tgttggaacaaagtctccatctgtgatga |
9544272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16140988 - 16141216
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16140988 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
16141087 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
16141088 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
16141187 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
16141188 |
tgttggaacaaagtctccatctgtgatga |
16141216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5389975 - 5390203
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5389975 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
5390074 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
5390075 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
5390174 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
5390175 |
tgttggaacaaagtctccatttgtgatga |
5390203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26305093 - 26304865
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26305093 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
26304994 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
26304993 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
26304894 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
26304893 |
tgttggaacaaagtctccatttgtgatga |
26304865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 26361725 - 26361953
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26361725 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
26361824 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
26361825 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
26361924 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
26361925 |
tgttggaacaaagtctccatttgtgatga |
26361953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32099917 - 32099689
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
32099917 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
32099818 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
32099817 |
gtgcacatgatagaaagagtctagctttagagtttaataatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
32099718 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||| ||||||| ||||||| |
|
|
| T |
32099717 |
tgttggaacaaaatctccatttgtgatga |
32099689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 46498651 - 46498423
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
46498651 |
tctttgacatgaaatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
46498552 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
46498551 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
46498452 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
46498451 |
tgttggaacaaagtctccatctgtgatga |
46498423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 8502586 - 8502358
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8502586 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
8502487 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
8502486 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtt |
8502387 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
8502386 |
tgttggaacaaagtctccatttgtgatga |
8502358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 44898836 - 44898608
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44898836 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
44898737 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
44898736 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtt |
44898637 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
44898636 |
tgttggaacaaagtctccatttgtgatga |
44898608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6536021 - 6535793
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6536021 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
6535922 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
6535921 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgctgaccatgcactttttgctttgacagctccttctttgtt |
6535822 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
6535821 |
tgttggaacaaagtctccatttgtgatga |
6535793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 13284233 - 13284416
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
13284233 |
tctttgacatgagatgtaccttcatgatgtactttcaaagtatcccatacctctttagcattcttgcattcatcaactctttcactttcttccatggtta |
13284332 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgac-catgcactcttatctttg |
183 |
Q |
| |
|
|||||||| ||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| |||||| |
|
|
| T |
13284333 |
gtgcacataatagaaagagtctagctttagaatttaacaatacttgagatttttcatctgttgacacatgcactcttttctttg |
13284416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 42596854 - 42596698
Alignment:
| Q |
71 |
catcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgc |
170 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42596854 |
catcacctctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttaacaatacctgagctttttcatctgttgaccatgc |
42596755 |
T |
|
| Q |
171 |
actcttatctttggcagctccttctttggttattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|||||| |||||| | ||||| |||||| ||||||||||||||||||| ||||| |
|
|
| T |
42596754 |
actcttttctttgatggttccttttttggtctttggaacaaagtctccatctgtgat |
42596698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 7582591 - 7582477
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| | || ||||| |||||||| ||| || |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| |
|
|
| T |
7582591 |
tcatgatgaatttttagagtgtcccaaacttcttttgcagtcacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtc |
7582492 |
T |
|
| Q |
122 |
tagctttagaattta |
136 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
7582491 |
gagctttagaattta |
7582477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 15175456 - 15175386
Alignment:
| Q |
66 |
acatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaattta |
136 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| ||||||||| |||| |
|
|
| T |
15175456 |
acattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaaaagtcaagctttagagttta |
15175386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 169; Significance: 9e-91; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29541984 - 29541764
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29541984 |
tctttgacatgagattgaccctcatgatgtattttcaaggtatcccatacctctttagcattcttacattcatcaactctttcactttcttccatggtta |
29541885 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
29541884 |
gtgcacatgatagaaagagtctagctttagagtttaacaatacctgagccttttcatctgttgaccatgcactcttttctttgacagctccttctttggt |
29541785 |
T |
|
| Q |
201 |
tattggaacaaagtctccatc |
221 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
29541784 |
tgttggaacaaagtctccatc |
29541764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18161602 - 18161374
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18161602 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
18161503 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
18161502 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
18161403 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
18161402 |
tgttggaacaaagtctccatctgtgatga |
18161374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16899483 - 16899255
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16899483 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatctcatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
16899384 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
16899383 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
16899284 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||| |||||||||| ||||||| |
|
|
| T |
16899283 |
tgttggaacatagtctccatctgtgatga |
16899255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31359098 - 31358870
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
31359098 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
31358999 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
31358998 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
31358899 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||| ||| ||||||| |
|
|
| T |
31358898 |
tgttggaacaaagtcttcatttgtgatga |
31358870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 34766893 - 34766667
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
34766893 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
34766794 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
34766793 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
34766694 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
34766693 |
tagtggaacaaagtctccatctgtgat |
34766667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18704847 - 18705073
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| | ||| || || ||||| ||||| ||||| |||| ||||||||||| |||||||||||||||| | |
|
|
| T |
18704847 |
tctttgacatgagatgtaccttcatgatgtactctcagagtgtctcatacctctttggcatttttacactcatcaactcttgcactttcttccatggtca |
18704946 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| || || ||||||||| |||||| |
|
|
| T |
18704947 |
gtgcacatgataaaaagagtctagctttagagtttagtaatacatgagctttttcatctgttgaccatgcactcttttcctttacagctccttatttggt |
18705046 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
| ||| ||||||||||||||| ||||| |
|
|
| T |
18705047 |
tgttgcaacaaagtctccatctgtgat |
18705073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18710782 - 18711008
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| | ||| || || ||||| ||||| ||||| |||| ||||||||||| |||||||||||||||| | |
|
|
| T |
18710782 |
tctttgacatgagatgtaccttcatgatgtactctcagagtgtctcatacctctttggcatttttacactcatcaactcttgcactttcttccatggtca |
18710881 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| || || ||||||||| |||||| |
|
|
| T |
18710882 |
gtgcacatgataaaaagagtctagctttagagtttagtaatacatgagctttttcatctgttgaccatgcactcttttcctttacagctccttatttggt |
18710981 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
| ||| ||||||||||||||| ||||| |
|
|
| T |
18710982 |
tgttgcaacaaagtctccatctgtgat |
18711008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18362814 - 18362586
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18362814 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
18362715 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
18362714 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
18362615 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
18362614 |
tgttggaacaaagtctccatctgtgatga |
18362586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 26201129 - 26201357
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26201129 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
26201228 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
26201229 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
26201328 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
26201329 |
tgttggaacaaagtctccatttgtgatga |
26201357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27413685 - 27413457
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27413685 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
27413586 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
27413585 |
gtgcacatgatagaaagagtctagctttaaaatttagtaatacctgacctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
27413486 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
27413485 |
tgttggaacaaagtctccatctgtgatga |
27413457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 33940857 - 33940629
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33940857 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
33940758 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
33940757 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtt |
33940658 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
33940657 |
tgttggaacaaagtctccatttgtgatga |
33940629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20949392 - 20949166
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
20949392 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
20949293 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
20949292 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
20949193 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
20949192 |
tagtggaacaaagtctccatctgtgat |
20949166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 220
Target Start/End: Original strand, 23375743 - 23375920
Alignment:
| Q |
43 |
tcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaacaata |
142 |
Q |
| |
|
|||||||| |||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| |
|
|
| T |
23375743 |
tcccatacctctttagcattcttgcatttatcaactctttcattttcttccatggttagtgcacatgataaaaagagtctaggtttagagtttaacaata |
23375842 |
T |
|
| Q |
143 |
cctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggttattggaacaaagtctccat |
220 |
Q |
| |
|
| |||||||| |||||| |||||||||||||||| | |||| | ||||||||| || |||||||||||||||||| |
|
|
| T |
23375843 |
catgagctttgtcatctattgaccatgcactcttttgtttgatggttccttctttagtctttggaacaaagtctccat |
23375920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 5601650 - 5601579
Alignment:
| Q |
66 |
acatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaa |
137 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
5601650 |
acattcatcaactctttcactttcttccatgcttagtgcacatgatagaaagagtcgagctttagaatttaa |
5601579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 24413786 - 24413672
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| | || ||||| |||||||| ||| || |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| |
|
|
| T |
24413786 |
tcatgatgaatttttagagtgtcccacacttcttttgcagtcacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtc |
24413687 |
T |
|
| Q |
122 |
tagctttagaattta |
136 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
24413686 |
gagctttagagttta |
24413672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 30453421 - 30453535
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| | || ||||| |||||||| ||| || |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| |
|
|
| T |
30453421 |
tcatgatgaatttttagagtgtcccacacttcttttgcagtcacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtc |
30453520 |
T |
|
| Q |
122 |
tagctttagaattta |
136 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
30453521 |
gagctttagagttta |
30453535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 30458499 - 30458613
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| | || ||||| |||||||| ||| || |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| |
|
|
| T |
30458499 |
tcatgatgaatttttagagtgtcccacacttcttttgcagtcacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtc |
30458598 |
T |
|
| Q |
122 |
tagctttagaattta |
136 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
30458599 |
gagctttagagttta |
30458613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 24289908 - 24290023
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| || |||||||| | |||||| || | |||||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
24289908 |
tcatgatgaatttttaacgtatcccaaatttcttttgccgtagtacattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
24290007 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
24290008 |
gagctttagagtttaa |
24290023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 24299415 - 24299530
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| || |||||||| | |||||| || | |||||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
24299415 |
tcatgatgaatttttaacgtatcccaaatttcttttgccgtagtacattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
24299514 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
24299515 |
gagctttagagtttaa |
24299530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 19781947 - 19781874
Alignment:
| Q |
154 |
tcatctgttgaccatgcactcttatctttggcagctccttctttggttattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|||||||| ||||||||||| || || || || |||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
19781947 |
tcatctgtggaccatgcactattttcctttacaactccttctttggttgttggaacaaagtctccatctgtgat |
19781874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 22456711 - 22456783
Alignment:
| Q |
65 |
tacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaa |
137 |
Q |
| |
|
||||| ||| || ||||||||||||||||||||||| || |||| |||||| ||| |||||| |||||||| |
|
|
| T |
22456711 |
tacattcataaattctttcactttcttccatggttaatgaacattgtaaaaagagttgagctttggaatttaa |
22456783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 8974383 - 8974155
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8974383 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
8974284 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
8974283 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
8974184 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
8974183 |
tgttggaacaaagtctccatctgtgatga |
8974155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6423844 - 6423616
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6423844 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
6423745 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
||||||| |||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| | || ||||| |||||||||||||||| |
|
|
| T |
6423744 |
gtgcacacgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcattttttgctttgacagctccttctttggt |
6423645 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
6423644 |
tgttggaacaaagtctccatctgtgatga |
6423616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 9538672 - 9538444
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9538672 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttgtttagcatttgtacattcatcaactctttcactttcttccatggtta |
9538573 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
9538572 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
9538473 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
9538472 |
tgttggaacaaagtctccatttgtgatga |
9538444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 12387524 - 12387297
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| | |||||||||| | |||||||||||||||| ||||| |||||| || || ||| |||||||||| ||||||||||||||| |
|
|
| T |
12387524 |
tctttgacatgagatgtaacttcatgatgtactatcaaggtatcccatacctcttt-gcattcttaaattcataaactctttcagtttcttccatggtta |
12387426 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||| || |||||| ||| |||||||||||| |
|
|
| T |
12387425 |
gtgcacatgatagaaagagtctagctttagagtttattaatacttgagctttttcatttgttgaccatgcacttttttctttgacagttccttctttggt |
12387326 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
12387325 |
ttttggaacaaagtctccatctgtgatga |
12387297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 48979744 - 48979673
Alignment:
| Q |
66 |
acatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaa |
137 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
48979744 |
acattcatcaactctttcactttcttccatgcttagtgcacatgatagaaagagtcgagctttagaatttaa |
48979673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 28366893 - 28367002
Alignment:
| Q |
19 |
ccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaata |
118 |
Q |
| |
|
||||||||||| ||||| | || ||||| |||||||| ||| | |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| | |
|
|
| T |
28366893 |
ccctcatgatgaatttttagagtgtcccaaacttcttttgcagtgacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaaga |
28366992 |
T |
|
| Q |
119 |
gtctagcttt |
128 |
Q |
| |
|
||| |||||| |
|
|
| T |
28366993 |
gtcgagcttt |
28367002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 28374773 - 28374823
Alignment:
| Q |
78 |
tctttcactttcttccatggttagtgcacatgataaaaatagtctagcttt |
128 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| ||| |||| |||||| |
|
|
| T |
28374773 |
tctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagcttt |
28374823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 28382595 - 28382645
Alignment:
| Q |
78 |
tctttcactttcttccatggttagtgcacatgataaaaatagtctagcttt |
128 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| ||| |||| |||||| |
|
|
| T |
28382595 |
tctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagcttt |
28382645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16156420 - 16156192
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16156420 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatacttctttagcatttgtacattcatcaactctttcactttcttccatggtta |
16156321 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
16156320 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
16156221 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
16156220 |
tgttggaacaaagtctccatctgtgatga |
16156192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 1987993 - 1988219
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
1987993 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
1988092 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
1988093 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgattccttctttggt |
1988192 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
1988193 |
taatggaacaaagtctccatctgtgat |
1988219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 22959865 - 22959697
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
|||| |||||||| || || |||||||||| ||| || || ||||| |||||||| ||||| |||||| ||||||| |||||||||||||||| ||||| |
|
|
| T |
22959865 |
tcttcgacatgagtggttccttcatgatgtacttttaaagtgtcccacacttctttggcatttgtacattcatcaaccctttcactttcttccaaggtta |
22959766 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatg |
169 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |||| ||||| |
|
|
| T |
22959765 |
atgcacatgataaaaataagctaactttagaatttaacaataccttatctttttcatcagttgtccatg |
22959697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17150910 - 17150684
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17150910 |
tctttgacatgagatgtaccctcatgatgtattttcaaggtatcccatacctctttagcattcttacattcatcaactctttcactttcttccatggtta |
17150811 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
||||| |||||| ||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
17150810 |
gtgcaaatgatagaaagagtctagctttaaagtttaacaatacctgagcattttcatctgttgaccatgcactcttttctttgacagttccttcgttggt |
17150711 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
| ||||||||||||||||||| ||||| |
|
|
| T |
17150710 |
tgttggaacaaagtctccatctgtgat |
17150684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6693755 - 6693527
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6693755 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
6693656 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
6693655 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtt |
6693556 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
6693555 |
tgttggaacaaagtctccatttgtgatga |
6693527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 16254770 - 16254548
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16254770 |
tctttgacatgagatgtaccctcatgatgtattttcaaggtatccc-----tctttagcattcttacattcatcaactctttcactttcttccatggtta |
16254676 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||| || || ||||||||||||| |
|
|
| T |
16254675 |
gtgcacatgatagaaagagtctagctttagagtttaacaatacttgagctttttcatctgttgaccatgtactcttttctgtgacaactccttctttggt |
16254576 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatg |
228 |
Q |
| |
|
| ||||||||||||||||||| |||||| |
|
|
| T |
16254575 |
tgttggaacaaagtctccatctgtgatg |
16254548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 520717 - 520943
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
520717 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
520816 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
520817 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
520916 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
520917 |
tagtggaacaaagtctccatctgtgat |
520943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7845262 - 7845488
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
7845262 |
tctttgacatgagatgtaccctcatgatatattttcagagtgtcccatacctctttggcatttttacactcatcaactctttcactttcttccatggtta |
7845361 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||| ||||| |||||||||||||||||||| |||| || || ||||||||||||| | |
|
|
| T |
7845362 |
gtgcacatgatagaaaaagtctagctttagagtttagtaatacatgagccttttcatctgttgaccatgccttcttttcctttatagctccttctttgtt |
7845461 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
| ||||||||||||||||||| ||||| |
|
|
| T |
7845462 |
tgttggaacaaagtctccatctgtgat |
7845488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 54698596 - 54698710
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| | || ||||| |||||||| ||| || |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| |
|
|
| T |
54698596 |
tcatgatgaatttttagagtgtcccacacttcttttgcagtcacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtc |
54698695 |
T |
|
| Q |
122 |
tagctttagaattta |
136 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
54698696 |
gagctttagagttta |
54698710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 26813451 - 26813342
Alignment:
| Q |
19 |
ccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaata |
118 |
Q |
| |
|
||||||||||| ||||| | || ||||| |||||||| ||| | |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| | |
|
|
| T |
26813451 |
ccctcatgatgaatttttagagtgtcccaaacttcttttgcagtaacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaaga |
26813352 |
T |
|
| Q |
119 |
gtctagcttt |
128 |
Q |
| |
|
||| |||||| |
|
|
| T |
26813351 |
gtcgagcttt |
26813342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18652755 - 18652527
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18652755 |
tctttgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacattcatcaactctttcactttcttccatggtta |
18652656 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| | |
|
|
| T |
18652655 |
gtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtt |
18652556 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| |||||||||||||||||| ||||||| |
|
|
| T |
18652555 |
tgttggaacaaagtctccatttgtgatga |
18652527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45015890 - 45015670
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
45015890 |
tctttgacatgagatgtaccctcatgatgtattttcaaggtatcccatacctctttagcatttgtacattcatcaactctttcactttcttccatggtta |
45015791 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||||||| | |||||||||||| | || ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
45015790 |
gtgcacatgataaaaagactctagctttagagtatagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttggt |
45015691 |
T |
|
| Q |
201 |
tattggaacaaagtctccatc |
221 |
Q |
| |
|
| |||||||||| ||| |||| |
|
|
| T |
45015690 |
tgttggaacaaaatcttcatc |
45015670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 9512572 - 9512796
Alignment:
| Q |
5 |
tgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgc |
104 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9512572 |
tgacatgagatgtaccctcatgatgtattttcagagtatcccatactcctttagcatttgtacactcatcaactctttcactttcttccatggttagtgc |
9512671 |
T |
|
| Q |
105 |
acatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggttatt |
204 |
Q |
| |
|
|||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| || || |
|
|
| T |
9512672 |
acatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatgcactttttgctttgacagctccttctttgtttgtt |
9512771 |
T |
|
| Q |
205 |
ggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
|||||||||||||||| ||||||| |
|
|
| T |
9512772 |
ggaacaaagtctccatttgtgatga |
9512796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27168790 - 27169016
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
27168790 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
27168889 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
27168890 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
27168989 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
27168990 |
tagtggaacaaagtctccatctgtgat |
27169016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 22903676 - 22903494
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| | |||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22903676 |
tctttgacatgagatgtaccatcatgatgtaatatcaaaatatcccatacatctttagcattaatacattcatcaactctttcactttcttccatggtta |
22903577 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttg |
183 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
22903576 |
gtgcacatgatagaaagagtctagctttagagtttaacaatacctgagttttttcatctgttgaccatgcactcttttctttg |
22903494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 1792026 - 1791955
Alignment:
| Q |
66 |
acatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaa |
137 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
1792026 |
acattcatcaactctttcactttcttccatgcttagtgcacatgatagaaagagtcgagctttagaatttaa |
1791955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 148245 - 148017
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| |||||||| ||||| |||||||||||| ||||| |||||||||||||||||||||||||||| | |
|
|
| T |
148245 |
tctttgacatgagaagtaccctcatgatgtatttttaaggtatcacatacctctttagcattcttacattcatcaactctttcactttcttccatggtaa |
148146 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
148145 |
gtgcacatgatagaaagagtctagcttaagagtttagtaatacctgagctttttcatttgttgaccatgcactcttttcctttacagctccttctttggt |
148046 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
| ||||||||||||||||||| ||||||| |
|
|
| T |
148045 |
tgttggaacaaagtctccatctgtgatga |
148017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 139; Significance: 7e-73; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7306 - 7080
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
7306 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
7207 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
7206 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
7107 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
7106 |
tagtggaacaaagtctccatctgtgat |
7080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 11088 - 10862
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
11088 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
10989 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
10988 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
10889 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
10888 |
tagtggaacaaagtctccatctgtgat |
10862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 6372 - 6598
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
6372 |
tctttgacatgagatgtaccttcatgatgtactttcaaggtatcccatacctctttagcatttttgcattcatcaactctttcactttcttccatggtta |
6471 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggt |
200 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
6472 |
gtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgaccatgcactcttaactttgatgatcccttctttggt |
6571 |
T |
|
| Q |
201 |
tattggaacaaagtctccatcagtgat |
227 |
Q |
| |
|
|| |||||||||||||||||| ||||| |
|
|
| T |
6572 |
tagtggaacaaagtctccatctgtgat |
6598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 20311 - 20084
Alignment:
| Q |
2 |
ctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttag |
101 |
Q |
| |
|
|||||||||||||||| || | |||||||| | ||| || |||||||| ||||| ||||| |||| |||||||||||||||||||||||| | || || |
|
|
| T |
20311 |
ctttgacatgagatgtacctttatgatgtactctcagagtgtcccatacatctttggcatttttacacacatcaactctttcactttcttccctagtcag |
20212 |
T |
|
| Q |
102 |
tgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggtt |
201 |
Q |
| |
|
||||||||||| ||| ||||||||||| || |||| |||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
20211 |
tgcacatgatagaaagagtctagctttggagtttagtaatacctgagatttttcatctgttgaccatgcacttttttcttttacagctccttctttggtt |
20112 |
T |
|
| Q |
202 |
attggaacaaagtctccatcagtgatga |
229 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
20111 |
gttggaacaaagtctccatctgtgatga |
20084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 220
Target Start/End: Complemental strand, 16722 - 16545
Alignment:
| Q |
43 |
tcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtctagctttagaatttaacaata |
142 |
Q |
| |
|
|||||||| |||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| |
|
|
| T |
16722 |
tcccatacctctttagcattcttgcatttatcaactctttcattttcttccatggttagtgcacatgataaaaagagtctaggtttagagtttaacaata |
16623 |
T |
|
| Q |
143 |
cctgagctttttcatctgttgaccatgcactcttatctttggcagctccttctttggttattggaacaaagtctccat |
220 |
Q |
| |
|
| |||||||| |||||| |||||||||||||||| | |||| | ||||||||| || |||||||||||||||||| |
|
|
| T |
16622 |
catgagctttgtcatctattgaccatgcactcttttgtttgatggttccttctttagtctttggaacaaagtctccat |
16545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 189330 - 189498
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggtta |
100 |
Q |
| |
|
|||| ||||||||| || || |||||||||| ||| || || ||||| |||||||| ||||| |||||| ||||||| |||||| ||||||||| ||||| |
|
|
| T |
189330 |
tcttcgacatgagaggttccttcatgatgtacttttaaagtgtcccacacttctttggcatttgtacattcatcaaccctttcaatttcttccaaggtta |
189429 |
T |
|
| Q |
101 |
gtgcacatgataaaaatagtctagctttagaatttaacaatacctgagctttttcatctgttgaccatg |
169 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |||| ||||| |
|
|
| T |
189430 |
gtgcacatgataaaaataagctaactttagaatttaacaataccttatctttttcatcagttgtccatg |
189498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 103110 - 103224
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| | || ||||| |||||||| ||| || |||| |||||||||||||||||||||||||| ||||||| ||||||| ||| |||| |
|
|
| T |
103110 |
tcatgatgaatttttagagtgtcccacacttcttttgcagtcacacattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtc |
103209 |
T |
|
| Q |
122 |
tagctttagaattta |
136 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
103210 |
gagctttagagttta |
103224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 258013 - 257898
Alignment:
| Q |
22 |
tcatgatgtattttcaaggtatcccatacttctttagcattcgtacatacatcaactctttcactttcttccatggttagtgcacatgataaaaatagtc |
121 |
Q |
| |
|
|||||||| ||||| || |||||||||| |||||| || | |||||| ||| || |||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
258013 |
tcatgatgaatttttaacgtatcccatatttcttttgccgtagtacattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagtt |
257914 |
T |
|
| Q |
122 |
tagctttagaatttaa |
137 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
257913 |
gagctttagagtttaa |
257898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 62 - 1
Alignment:
| Q |
1 |
tctttgacatgagatgtgccctcatgatgtattttcaaggtatcccatacttctttagcatt |
62 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
62 |
tctttgacatgagatgtaccttcatgatgtactttcaaagtatcccatacctctttagcatt |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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