View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3639_high_39 (Length: 256)
Name: NF3639_high_39
Description: NF3639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3639_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 38286666 - 38286908
Alignment:
| Q |
1 |
ccacccaacatctagagatacaagccaatccaatagttgctgtatcattacatccatctactgacatgaactatgttaacattgttgttacaaaaggcct |
100 |
Q |
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| T |
38286666 |
ccacccaacatctagagatacaagccaatccaatagttgctgtatcattacatccatctactgacatgaactatgttaacattgttgttacaaaaggcct |
38286765 |
T |
|
| Q |
101 |
gaaatttaaatttttgaatacataatgatttcttccttttcaaatctttcacaaagtgagacagaaaatctatttgatctattttttccgtgggatccag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
38286766 |
gaaatttaaatttttgaatacataatgatttcttccttttcaaatctttcacaaagtgaaacagaaaatctatttgatctattttttccgtgggatccag |
38286865 |
T |
|
| Q |
201 |
attggcaacattcggttgttaattagtactgcctctcggtttc |
243 |
Q |
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| T |
38286866 |
attggcaacattcggttgttaattagtactgcctctcggtttc |
38286908 |
T |
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