View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3639_low_51 (Length: 246)

Name: NF3639_low_51
Description: NF3639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3639_low_51
NF3639_low_51
[»] chr7 (1 HSPs)
chr7 (1-231)||(35345398-35345628)
[»] chr6 (2 HSPs)
chr6 (1-231)||(2272459-2272689)
chr6 (49-118)||(6717869-6717938)
[»] chr1 (6 HSPs)
chr1 (1-231)||(4009790-4010020)
chr1 (130-231)||(37906658-37906759)
chr1 (130-231)||(37907044-37907145)
chr1 (130-231)||(37906851-37906952)
chr1 (1-82)||(37906577-37906658)
chr1 (49-127)||(37904888-37904964)
[»] chr5 (2 HSPs)
chr5 (1-231)||(39343946-39344176)
chr5 (1-51)||(28725602-28725652)
[»] scaffold0187 (4 HSPs)
scaffold0187 (130-231)||(32318-32419)
scaffold0187 (130-231)||(31932-32033)
scaffold0187 (130-231)||(32125-32226)
scaffold0187 (1-82)||(32419-32500)
[»] chr3 (2 HSPs)
chr3 (132-231)||(18202328-18202427)
chr3 (1-51)||(18202428-18202478)
[»] chr8 (6 HSPs)
chr8 (49-127)||(23099220-23099298)
chr8 (49-118)||(18289017-18289086)
chr8 (132-208)||(18290406-18290482)
chr8 (49-118)||(27086050-27086119)
chr8 (1-51)||(18290355-18290405)
chr8 (148-199)||(18290562-18290613)
[»] scaffold0521 (4 HSPs)
scaffold0521 (49-118)||(3232-3301)
scaffold0521 (132-208)||(4535-4611)
scaffold0521 (1-51)||(4484-4534)
scaffold0521 (148-199)||(4691-4742)
[»] chr4 (1 HSPs)
chr4 (49-111)||(34338211-34338273)


Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 35345628 - 35345398
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35345628 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 35345529  T
Q  101 aacagcacaataaatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35345528 aacagcacaatatatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 35345429  T
Q  201 ttgcataagaaattagagagatagagagatg 231  Q
    |||||||||||||||||||||||||||||||    
T  35345428 ttgcataagaaattagagagatagagagatg 35345398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 2272689 - 2272459
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2272689 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 2272590  T
Q  101 aacagcacaataaatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2272589 aacagcacaatatatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 2272490  T
Q  201 ttgcataagaaattagagagatagagagatg 231  Q
    |||||||||||||||||||||||||||||||    
T  2272489 ttgcataagaaattagagagatagagagatg 2272459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 6717938 - 6717869
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaataaatata 118  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  6717938 tagtttatgcaaacaactatctgtcagttttcaaatagcaacatttatacaaaacagcacaatatatata 6717869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 4010020 - 4009790
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4010020 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 4009921  T
Q  101 aacagcacaataaatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4009920 aacagcacaatatatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 4009821  T
Q  201 ttgcataagaaattagagagatagagagatg 231  Q
    |||||||||||||||||||||||||||||||    
T  4009820 ttgcataagaaattagagagatagagagatg 4009790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 37906658 - 37906759
Alignment:
Q  130 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagaga 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37906658 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggtaaattagtgattgcataagaaattagagagatagagaga 37906757  T
Q  230 tg 231  Q
    ||    
T  37906758 tg 37906759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 37907044 - 37907145
Alignment:
Q  130 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagaga 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  37907044 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggtaaattagtgattgcataggaaattagagagatagagaga 37907143  T
Q  230 tg 231  Q
    ||    
T  37907144 tg 37907145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 37906851 - 37906952
Alignment:
Q  130 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagaga 229  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  37906851 ttcgtagctttgctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggtaaattagtgattgcataagaaattaaagagatagagaga 37906950  T
Q  230 tg 231  Q
    ||    
T  37906951 tg 37906952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37906577 - 37906658
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37906577 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcat 37906658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 37904888 - 37904964
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaataaatatataataaaca 127  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  37904888 tagtttacgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaat--atatataataaaca 37904964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 39344176 - 39343946
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39344176 aattaaatacatacaaatttctaaggcttatttttccataccttcaagtagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaa 39344077  T
Q  101 aacagcacaataaatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39344076 aacagcacaatatatatataataaacattttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtga 39343977  T
Q  201 ttgcataagaaattagagagatagagagatg 231  Q
    |||||||||||||||||||||||||||||||    
T  39343976 ttgcataagaaattagagagatagagagatg 39343946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28725602 - 28725652
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtag 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28725602 aattaaatacatacaaatttctaaggcttatttttccatacctttaggtag 28725652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 98; Significance: 2e-48; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 32419 - 32318
Alignment:
Q  130 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagaga 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32419 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggtaaattagtgattgcataagaaattagagagatagagaga 32320  T
Q  230 tg 231  Q
    ||    
T  32319 tg 32318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 32033 - 31932
Alignment:
Q  130 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagaga 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  32033 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggtaaattagtgattgcataggaaattagagagatagagaga 31934  T
Q  230 tg 231  Q
    ||    
T  31933 tg 31932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 32226 - 32125
Alignment:
Q  130 ttcgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagaga 229  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  32226 ttcgtagctttgctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggtaaattagtgattgcataagaaattaaagagatagagaga 32127  T
Q  230 tg 231  Q
    ||    
T  32126 tg 32125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32500 - 32419
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32500 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtagtttatgcaaacaactatctgtcaattttcat 32419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 18202427 - 18202328
Alignment:
Q  132 cgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataagaaattagagagatagagagatg 231  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18202427 cgtagctttccttttatgaaaacacaaatttatgattataaaacacaaaatcaaaagccaaattagtgattgcataagaaattagagagatagagagatg 18202328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18202478 - 18202428
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtag 51  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18202478 aattaaatacatacaaatttctaaggcttatttttccatacctataagtag 18202428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 23099298 - 23099220
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaataaatatataataaaca 127  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  23099298 tagtttatgcaaacaactatctgtcagttttcatatagcaacatttatacaaaacaacacaatatatatatagtaaaca 23099220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 18289017 - 18289086
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaataaatata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18289017 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaagagcacaatatatata 18289086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 18290406 - 18290482
Alignment:
Q  132 cgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataa 208  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  18290406 cgtagctttccttttattaaaacacaaatttatgattataaaacacaaaatcaaaagccaaattagtgattgcataa 18290482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 27086050 - 27086119
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaataaatata 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  27086050 tagtttatgcaaacaactatctgtcagttttcatatagcaacatttatacaaaacaacacaatatatata 27086119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18290355 - 18290405
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtag 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18290355 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtag 18290405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 18290562 - 18290613
Alignment:
Q  148 tgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtg 199  Q
    |||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  18290562 tgaaaacacaaatttatgattataaatcacaaaatcaaaacccaaattagtg 18290613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 62; Significance: 7e-27; HSPs: 4)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 3232 - 3301
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaataaatata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3232 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacaacacaatatatata 3301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 4535 - 4611
Alignment:
Q  132 cgtagctttcctttcatgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtgattgcataa 208  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  4535 cgtagctttccttttataaaaacacaaatttatgattataaaacacaaaatcaaaagccaaattagtgattgcataa 4611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4484 - 4534
Alignment:
Q  1 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtag 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4484 aattaaatacatacaaatttctaaggcttatttttccatacctttaagtag 4534  T

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Target: scaffold0521; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 4691 - 4742
Alignment:
Q  148 tgaaaacacaaatttatgatgataaaacacaaaatcaaaaggcaaattagtg 199  Q
    |||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  4691 tgaaaacacaaatttatgattataaatcacaaaatcaaaacccaaattagtg 4742  T

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Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 34338273 - 34338211
Alignment:
Q  49 tagtttatgcaaacaactatctgtcaattttcatatagcaacatttatacaaaacagcacaat 111  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  34338273 tagtttatgcaaacaactatctgtcagttttcatatagcaacatttatacaaaacaacacaat 34338211  T

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