View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3640_high_21 (Length: 381)
Name: NF3640_high_21
Description: NF3640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3640_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 363
Target Start/End: Complemental strand, 22270800 - 22270457
Alignment:
| Q |
16 |
tcaacctactccaacaacaaaatgtgagtctctcctgagtagaagaaaatcaagataaaattcctactacaatcccgactcaaatcgaggtcgctcacca |
115 |
Q |
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| T |
22270800 |
tcaacttactccagcaacaaaatgtgagtctctcctgagtagaagaaaatcaagaaaaaattcctaccacaataccaactcaaatcgaggtcgctcgcca |
22270701 |
T |
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| Q |
116 |
aaatcaacaaaccgctacttaaataaatgtggcagcggatgctgcctccgagaaatcggaaatcagaatccataccacaaatatctttctcctgctcatc |
215 |
Q |
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| T |
22270700 |
aaatcaacaaaccgctactcaaataaatgtagcagcggatgctacctctgagaaatcggaaatcagaatccatgccagaaatgtctttctccttctcatc |
22270601 |
T |
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| Q |
216 |
gtggagaatctcctccacaagactagactcatacggaggaggaagtagtcatggtcctttttgcgagaggcata-aaaatttcctcctacacgttaatgt |
314 |
Q |
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|||||||||||||||||||||||| | |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || ||| | || |
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| T |
22270600 |
gtggagaatctcctccacaagactt-----agacggaggaggaagtagtcatagtccttttcgcgagaggcatagaaaatttcctcctgcatgttgaagt |
22270506 |
T |
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| Q |
315 |
cgcgacaagcacagtgacatatctctcgagaaaagccgatatataaaaa |
363 |
Q |
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||||||||||||| ||||||||||| |||||||| |||||||||||||| |
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| T |
22270505 |
cgcgacaagcacaatgacatatctcccgagaaaaaccgatatataaaaa |
22270457 |
T |
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