View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3640_high_4 (Length: 624)

Name: NF3640_high_4
Description: NF3640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3640_high_4
NF3640_high_4
[»] chr7 (47 HSPs)
chr7 (1-125)||(13880827-13880951)
chr7 (1-131)||(9098042-9098172)
chr7 (1-138)||(13880327-13880465)
chr7 (2-124)||(30026128-30026251)
chr7 (1-138)||(11319628-11319766)
chr7 (1-147)||(19236809-19236956)
chr7 (1-138)||(10882970-10883108)
chr7 (5-142)||(28409257-28409391)
chr7 (1-124)||(44467288-44467411)
chr7 (1-139)||(13031884-13032021)
chr7 (4-147)||(13260424-13260569)
chr7 (1-147)||(13692554-13692702)
chr7 (1-140)||(12366547-12366687)
chr7 (2-124)||(2500261-2500385)
chr7 (1-78)||(48800438-48800515)
chr7 (3-110)||(13018323-13018429)
chr7 (4-124)||(13648935-13649057)
chr7 (2-123)||(14426752-14426874)
chr7 (1-123)||(2913418-2913542)
chr7 (1-110)||(4494725-4494834)
chr7 (2-122)||(16542835-16542955)
chr7 (2-122)||(16622707-16622827)
chr7 (1-61)||(13890743-13890803)
chr7 (1-75)||(15088776-15088850)
chr7 (77-147)||(16316433-16316503)
chr7 (25-139)||(14193296-14193412)
chr7 (1-110)||(29935175-29935283)
chr7 (1-100)||(13137721-13137821)
chr7 (1-147)||(22577817-22577967)
chr7 (1-46)||(13172194-13172239)
chr7 (4-124)||(30945189-30945310)
chr7 (2-109)||(9709631-9709739)
chr7 (3-138)||(11793130-11793266)
chr7 (24-130)||(5000675-5000782)
chr7 (38-124)||(21381287-21381374)
chr7 (1-123)||(33691523-33691646)
chr7 (68-138)||(13303061-13303131)
chr7 (77-131)||(15468146-15468200)
chr7 (1-46)||(16307532-16307575)
chr7 (5-75)||(16316377-16316447)
chr7 (38-125)||(48062663-48062752)
chr7 (38-124)||(27871931-27872019)
chr7 (1-65)||(21695667-21695731)
chr7 (68-124)||(24788347-24788403)
chr7 (2-62)||(35952469-35952529)
chr7 (1-64)||(39284392-39284456)
chr7 (68-124)||(39284444-39284500)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-147)||(43652-43798)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-147)||(244000-244146)
scaffold0004 (5-138)||(220464-220598)
scaffold0004 (86-138)||(377391-377443)
[»] chr4 (31 HSPs)
chr4 (1-147)||(6641893-6642039)
chr4 (1-145)||(14604660-14604805)
chr4 (4-110)||(41114509-41114615)
chr4 (1-80)||(17540698-17540777)
chr4 (1-146)||(16632651-16632797)
chr4 (1-125)||(37435274-37435399)
chr4 (1-125)||(56034792-56034917)
chr4 (4-79)||(17787793-17787868)
chr4 (2-138)||(45833615-45833753)
chr4 (1-138)||(15139449-15139587)
chr4 (4-110)||(29680314-29680421)
chr4 (2-125)||(9141095-9141220)
chr4 (5-74)||(11916006-11916075)
chr4 (1-47)||(11901528-11901574)
chr4 (1-110)||(19620845-19620955)
chr4 (1-78)||(3395907-3395984)
chr4 (2-74)||(10073208-10073280)
chr4 (1-146)||(12601312-12601459)
chr4 (2-124)||(19884922-19885048)
chr4 (1-75)||(12810947-12811021)
chr4 (68-138)||(40846320-40846390)
chr4 (2-109)||(13575898-13576006)
chr4 (2-109)||(54680147-54680255)
chr4 (68-124)||(55380494-55380550)
chr4 (4-47)||(10250134-10250177)
chr4 (77-124)||(17398529-17398576)
chr4 (5-75)||(40846367-40846438)
chr4 (8-75)||(55380527-55380594)
chr4 (82-124)||(6517704-6517746)
chr4 (98-147)||(37435387-37435436)
chr4 (2-124)||(29121608-29121732)
[»] chr6 (37 HSPs)
chr6 (2-131)||(10640222-10640351)
chr6 (5-139)||(13435758-13435893)
chr6 (1-139)||(23284790-23284928)
chr6 (2-147)||(24117045-24117192)
chr6 (7-103)||(3680739-3680835)
chr6 (4-137)||(9718071-9718205)
chr6 (60-146)||(19470886-19470972)
chr6 (1-124)||(20112498-20112621)
chr6 (1-110)||(19624217-19624327)
chr6 (68-146)||(26943781-26943859)
chr6 (1-110)||(14100257-14100366)
chr6 (1-78)||(19086438-19086515)
chr6 (1-123)||(34451468-34451592)
chr6 (1-125)||(12715219-12715344)
chr6 (2-124)||(21235338-21235461)
chr6 (68-131)||(25597713-25597776)
chr6 (38-124)||(33351766-33351853)
chr6 (77-131)||(13602406-13602460)
chr6 (4-138)||(21625325-21625460)
chr6 (1-46)||(25592838-25592883)
chr6 (1-78)||(26971994-26972071)
chr6 (1-45)||(19876107-19876151)
chr6 (1-44)||(16462437-16462480)
chr6 (2-124)||(20730505-20730628)
chr6 (4-47)||(23298259-23298302)
chr6 (1-75)||(13602446-13602520)
chr6 (1-59)||(19689023-19689081)
chr6 (4-116)||(15302418-15302533)
chr6 (8-65)||(15987495-15987552)
chr6 (1-46)||(18171817-18171862)
chr6 (1-46)||(23005839-23005884)
chr6 (1-46)||(23782482-23782527)
chr6 (1-46)||(24718552-24718597)
chr6 (5-50)||(26943861-26943906)
chr6 (2-59)||(32544575-32544632)
chr6 (5-124)||(16264954-16265074)
chr6 (2-46)||(24728352-24728396)
[»] chr3 (40 HSPs)
chr3 (1-146)||(16199607-16199752)
chr3 (1-136)||(41495202-41495338)
chr3 (1-138)||(15903425-15903563)
chr3 (1-110)||(19249208-19249318)
chr3 (1-138)||(52920631-52920769)
chr3 (1-140)||(13824256-13824398)
chr3 (4-138)||(20646381-20646516)
chr3 (1-146)||(14392801-14392947)
chr3 (4-138)||(22803899-22804033)
chr3 (1-139)||(6090957-6091096)
chr3 (5-147)||(20725301-20725452)
chr3 (5-123)||(17238753-17238871)
chr3 (1-125)||(12962896-12963021)
chr3 (5-125)||(37467541-37467662)
chr3 (1-138)||(31303612-31303753)
chr3 (1-138)||(13948562-13948700)
chr3 (1-138)||(29951234-29951371)
chr3 (1-138)||(30000388-30000525)
chr3 (4-62)||(26417489-26417547)
chr3 (1-75)||(49642574-49642648)
chr3 (6-61)||(12388676-12388731)
chr3 (30-138)||(25398098-25398208)
chr3 (2-47)||(4243002-4243047)
chr3 (1-46)||(8728821-8728866)
chr3 (1-46)||(9080708-9080753)
chr3 (77-146)||(12388730-12388799)
chr3 (3-75)||(16032770-16032842)
chr3 (4-79)||(12968626-12968700)
chr3 (2-109)||(47405247-47405356)
chr3 (1-46)||(14073003-14073048)
chr3 (2-75)||(20627275-20627348)
chr3 (1-125)||(28582346-28582471)
chr3 (25-124)||(2561414-2561514)
chr3 (91-138)||(49642648-49642695)
chr3 (2-75)||(40800116-40800189)
chr3 (77-125)||(2785318-2785366)
chr3 (77-125)||(21636552-21636600)
chr3 (2-62)||(47208013-47208073)
chr3 (77-125)||(49666288-49666336)
chr3 (2-62)||(50300521-50300581)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-147)||(40863-41009)
[»] scaffold0076 (2 HSPs)
scaffold0076 (177-412)||(14326-14582)
scaffold0076 (441-605)||(14588-14754)
[»] chr1 (30 HSPs)
chr1 (1-146)||(21191596-21191741)
chr1 (1-125)||(17024698-17024822)
chr1 (16-147)||(12613527-12613658)
chr1 (1-80)||(18896304-18896383)
chr1 (1-122)||(26701859-26701981)
chr1 (1-124)||(16235027-16235152)
chr1 (1-142)||(2268749-2268892)
chr1 (2-138)||(22599898-22600036)
chr1 (30-124)||(21029019-21029113)
chr1 (4-147)||(33256071-33256216)
chr1 (4-147)||(33276243-33276388)
chr1 (5-125)||(10757645-10757764)
chr1 (68-147)||(19717739-19717818)
chr1 (30-138)||(35402033-35402143)
chr1 (24-125)||(12284678-12284780)
chr1 (1-77)||(22154162-22154238)
chr1 (14-116)||(30893310-30893413)
chr1 (1-59)||(36134480-36134538)
chr1 (4-65)||(20954173-20954234)
chr1 (2-124)||(2267296-2267419)
chr1 (30-138)||(23036273-23036383)
chr1 (4-46)||(1090272-1090314)
chr1 (1-59)||(1900639-1900697)
chr1 (1-75)||(19717795-19717869)
chr1 (4-46)||(24227707-24227749)
chr1 (38-125)||(46089218-46089307)
chr1 (1-75)||(48704490-48704564)
chr1 (1-46)||(20109691-20109736)
chr1 (77-138)||(20954266-20954327)
chr1 (86-123)||(21134986-21135023)
[»] scaffold0364 (1 HSPs)
scaffold0364 (4-125)||(6230-6351)
[»] chr8 (37 HSPs)
chr8 (1-144)||(18730770-18730914)
chr8 (1-123)||(18685205-18685328)
chr8 (5-147)||(20382194-20382337)
chr8 (2-140)||(19707720-19707858)
chr8 (1-144)||(18722425-18722569)
chr8 (1-125)||(19956145-19956270)
chr8 (1-147)||(17267681-17267828)
chr8 (4-138)||(19943456-19943591)
chr8 (1-138)||(17914678-17914816)
chr8 (4-124)||(19156415-19156536)
chr8 (2-138)||(24646557-24646693)
chr8 (1-124)||(602529-602652)
chr8 (5-80)||(22461428-22461503)
chr8 (1-110)||(17441617-17441727)
chr8 (1-138)||(20255362-20255500)
chr8 (1-146)||(16681100-16681245)
chr8 (2-147)||(33083065-33083213)
chr8 (4-80)||(18772906-18772982)
chr8 (4-131)||(29693541-29693671)
chr8 (5-147)||(17525528-17525671)
chr8 (1-138)||(39693754-39693892)
chr8 (1-89)||(16189267-16189356)
chr8 (1-78)||(17702006-17702083)
chr8 (91-147)||(16189192-16189248)
chr8 (86-145)||(23263493-23263552)
chr8 (1-110)||(18120918-18121028)
chr8 (24-125)||(18680031-18680132)
chr8 (68-138)||(22745706-22745776)
chr8 (1-78)||(21933181-21933258)
chr8 (2-62)||(30421237-30421297)
chr8 (1-75)||(18320985-18321059)
chr8 (4-46)||(23772679-23772721)
chr8 (1-65)||(22745763-22745827)
chr8 (77-125)||(36105441-36105489)
chr8 (77-125)||(40845260-40845308)
chr8 (77-125)||(43640005-43640053)
chr8 (2-108)||(43645081-43645189)
[»] chr2 (41 HSPs)
chr2 (1-147)||(22272342-22272488)
chr2 (4-138)||(24850410-24850544)
chr2 (1-110)||(44881398-44881507)
chr2 (4-138)||(23235228-23235363)
chr2 (1-138)||(22454731-22454869)
chr2 (1-138)||(30667210-30667348)
chr2 (1-73)||(19115411-19115483)
chr2 (1-124)||(39037397-39037521)
chr2 (1-124)||(25829338-25829463)
chr2 (1-73)||(26618848-26618920)
chr2 (2-110)||(19540648-19540756)
chr2 (1-139)||(9015112-9015251)
chr2 (4-147)||(22260616-22260761)
chr2 (1-74)||(18430680-18430753)
chr2 (24-147)||(40782681-40782806)
chr2 (1-124)||(24576284-24576408)
chr2 (5-68)||(18703064-18703127)
chr2 (2-124)||(20151792-20151915)
chr2 (4-75)||(41121498-41121569)
chr2 (24-138)||(28140399-28140515)
chr2 (4-137)||(20568493-20568628)
chr2 (68-147)||(10009560-10009639)
chr2 (2-137)||(21536991-21537126)
chr2 (68-138)||(22187911-22187981)
chr2 (86-138)||(38781618-38781670)
chr2 (2-124)||(6573880-6574003)
chr2 (1-75)||(18376678-18376752)
chr2 (1-59)||(38781681-38781739)
chr2 (1-109)||(30621437-30621546)
chr2 (1-109)||(30624058-30624167)
chr2 (1-45)||(20569774-20569818)
chr2 (77-125)||(44840639-44840687)
chr2 (16-75)||(23184103-23184162)
chr2 (16-75)||(23595360-23595419)
chr2 (105-147)||(7609172-7609214)
chr2 (4-46)||(24440509-24440551)
chr2 (96-138)||(25037096-25037138)
chr2 (96-138)||(25041203-25041245)
chr2 (2-75)||(22187861-22187934)
chr2 (1-46)||(24302697-24302742)
chr2 (77-125)||(33074459-33074507)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-147)||(35929-36080)
scaffold0056 (77-125)||(25498-25546)
[»] scaffold0290 (1 HSPs)
scaffold0290 (2-131)||(18368-18498)
[»] scaffold0035 (1 HSPs)
scaffold0035 (2-147)||(19221-19367)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-146)||(159288-159432)
scaffold0022 (1-124)||(39652-39776)
scaffold0022 (1-124)||(137712-137836)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-145)||(212573-212718)
[»] scaffold0334 (1 HSPs)
scaffold0334 (5-147)||(10011-10154)
[»] chr5 (27 HSPs)
chr5 (5-131)||(642488-642615)
chr5 (4-138)||(23881289-23881423)
chr5 (2-138)||(21099482-21099619)
chr5 (1-123)||(89229-89352)
chr5 (1-147)||(17815180-17815328)
chr5 (4-124)||(21910762-21910884)
chr5 (4-124)||(26784577-26784699)
chr5 (16-124)||(9398551-9398659)
chr5 (5-102)||(6499480-6499578)
chr5 (2-124)||(33022885-33023008)
chr5 (2-123)||(5430106-5430228)
chr5 (1-75)||(23412783-23412857)
chr5 (2-124)||(4887243-4887367)
chr5 (1-75)||(12352610-12352685)
chr5 (77-140)||(19536155-19536218)
chr5 (1-75)||(20551148-20551223)
chr5 (6-61)||(25096608-25096663)
chr5 (6-61)||(25154578-25154633)
chr5 (68-138)||(20551101-20551171)
chr5 (77-147)||(25096662-25096732)
chr5 (77-147)||(25154632-25154702)
chr5 (38-125)||(29138222-29138310)
chr5 (5-110)||(21072037-21072142)
chr5 (68-125)||(23412834-23412891)
chr5 (38-124)||(30115704-30115792)
chr5 (5-65)||(7745443-7745503)
chr5 (2-62)||(31118160-31118220)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-138)||(20717-20855)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-148)||(5437-5586)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-131)||(4693-4824)
[»] scaffold0120 (2 HSPs)
scaffold0120 (2-139)||(36523-36660)
scaffold0120 (2-139)||(42345-42482)
[»] scaffold0146 (1 HSPs)
scaffold0146 (5-123)||(15328-15446)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-137)||(12437-12575)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-138)||(702-840)
[»] scaffold0171 (1 HSPs)
scaffold0171 (8-125)||(27198-27316)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-110)||(1251-1360)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-124)||(1944-2068)
[»] scaffold0084 (2 HSPs)
scaffold0084 (4-124)||(32712-32834)
scaffold0084 (1-45)||(49638-49682)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-124)||(89818-89941)
[»] scaffold1434 (1 HSPs)
scaffold1434 (24-147)||(556-681)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-103)||(9883-9985)
[»] scaffold0193 (1 HSPs)
scaffold0193 (14-138)||(16005-16131)
[»] scaffold1359 (1 HSPs)
scaffold1359 (2-123)||(435-557)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-124)||(8136-8261)
scaffold0026 (1-147)||(60232-60380)
scaffold0026 (86-147)||(151722-151783)
scaffold0026 (69-147)||(115737-115816)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-124)||(14902-15026)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-65)||(10169-10233)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-80)||(8109-8192)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-124)||(1870-1995)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-75)||(74854-74928)
[»] scaffold0485 (2 HSPs)
scaffold0485 (1-89)||(9123-9211)
scaffold0485 (98-147)||(9252-9301)
[»] scaffold0473 (1 HSPs)
scaffold0473 (38-124)||(2510-2598)
[»] scaffold0020 (1 HSPs)
scaffold0020 (4-80)||(145150-145226)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-125)||(13850-13976)
[»] scaffold0324 (1 HSPs)
scaffold0324 (16-75)||(10228-10287)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-124)||(5700-5823)
[»] scaffold0066 (1 HSPs)
scaffold0066 (24-110)||(60654-60740)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-75)||(25738-25812)
[»] scaffold0479 (1 HSPs)
scaffold0479 (68-125)||(10193-10250)
[»] scaffold0395 (1 HSPs)
scaffold0395 (25-138)||(13304-13417)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-62)||(7993-8054)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-62)||(19338-19399)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-62)||(143394-143455)
[»] scaffold0471 (1 HSPs)
scaffold0471 (77-125)||(3558-3606)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13880951 - 13880827
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||| |||| ||||||||||    
T  13880951 ctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagtggttatgaagtcaagtgctcctgaagtgatgacgtc 13880852  T
Q  101 atcggaagcaagatcatcagaagca 125  Q
    ||| |||||||| ||||||||||||    
T  13880851 atcagaagcaagttcatcagaagca 13880827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9098042 - 9098172
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||| |||||||||||||||| ||| |||| |||||| |||    
T  9098042 ctggaagaacaaatgagagcaatggaatcaacaagatggaagcttgaagcatctgaagaaaagaggttctgaagtcaagtgctcctgaagtgatgatgtc 9098141  T
Q  101 atcggaagcaagatcatcagaagcatctcat 131  Q
    ||| |||||||| |||| ||||||| |||||    
T  9098142 atcagaagcaagttcattagaagcacctcat 9098172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 13880465 - 13880327
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| ||||| |||||||||| |||| ||| |||| ||||||| |    
T  13880465 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgcttctgaagtcaaagtgctcctgaagtgatgacat 13880366  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| |||||||||||||||||| ||||||    
T  13880365 catcagaagcaagttcatcagaagcatctcatcagaagc 13880327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 30026251 - 30026128
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatgacgtc 100  Q
    |||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| |||||||||  |||| ||| |||| ||||||||||    
T  30026251 tggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaagtaaaagtgctcctgaagtgatgacgtc 30026152  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||||||||    
T  30026151 atcagaagcaagttcatcagaagc 30026128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 11319766 - 11319628
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||||| ||| ||||| |||||||||| |||||| |||||| ||||| | |||||| | |||| ||| |||| |||||||||    
T  11319766 ctggaagaacaaaagagagcaatgaaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagccaaagtgctcctgaagtgatgacgt 11319667  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||   ||||||| |||||||||||||||||| ||||||    
T  11319666 cattaaaagcaagttcatcagaagcatctcatcagaagc 11319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19236809 - 19236956
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||  ||||||| ||||| |||||||| |||||| | ||||||| |||| || ||||||||||| ||  |||| |||||||||    
T  19236809 ctggaagaacaaattaagagttatggaatcaacaaaaaggaagcctgaagcatctgaagaatagtgattttgaagtcaagtgcttctgaagtgatgacgt 19236908  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||| |||||||| || |||||| || ||||| |||||||||||||||    
T  19236909 catcagaagcaagttcgtcagaaccacctcatcagaagcaacatcacc 19236956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10882970 - 10883108
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| || ||||||| |||||| |||||| ||||| | |||||||| |||| ||| |||| ||| |||||    
T  10882970 ctggaagaacaaaagagagcaaaggaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctactgaagtcaaagtgctcctgaagtgacgacgt 10883069  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    | || |||||||| |||||||||||||| ||| ||||||    
T  10883070 cgtcagaagcaagttcatcagaagcatcccatcagaagc 10883108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 28409391 - 28409257
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 104  Q
    ||||||||| ||||||||  ||||  |||| ||||||| ||||||||| |||||| ||||| |  ||||   |||| ||| |||| |||||||||||||     
T  28409391 aagaacaaaagagagcaaatgaatcgacaaaaaggaagtttgaagcgtctgaagagaagtgctattgaa---aagtgctcctgaagtgatgacgtcatca 28409295  T
Q  105 gaagcaagatcatcagaagcatctcattagaagcaaca 142  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  28409294 gaagcaagttcatcagaagcatctcatcagaagcaaca 28409257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 44467411 - 44467288
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||  ||||||||||||| ||||| ||||||| ||||||| | |||||| ||||| | |||||||  ||| ||| |||| |||||||| |    
T  44467411 ctggaagaacaaaatagagcaatggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaagtatagtgctcctgaagtgatgacgcc 44467312  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||||||||    
T  44467311 atcagaagcaagttcatcagaagc 44467288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 13031884 - 13032021
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||||||||||| |||||| | |||||||||||||| |||||||||||| | |||||||  ||| ||| || | | ||||||||    
T  13031884 ctggaagaacaaa-gagagcaatggaatcaacaaggatgaagcttgaagcgtctgaagaaaagtgctcctgaagtttagtgctcctggattaatgacgtc 13031982  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagca 139  Q
    ||| |||||||| |||  |||| || ||||| |||||||    
T  13031983 atcagaagcaagttcactagaaacacctcatcagaagca 13032021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 13260424 - 13260569
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||||| |||||  | ||||||||||  ||||||||||||||| | | |||| ||||| |  |||||||||  || ||| |||| |||||| ||||    
T  13260424 gaagaacaaaagagagataaggaattaacataaaggaagcttgaagcatttaaagagaagtgctcatgaagtcaaaagtgctcctgaagtgatgatgtca 13260523  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    || |||||||| |||||| |||||||||||||||||||| ||||||    
T  13260524 tcagaagcaagttcatcataagcatctcattagaagcaagatcacc 13260569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 13692702 - 13692554
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| |  || |||||||||| | |||| |||||| ||||| | |||||| |||  || ||| |||| |||||||     
T  13692702 ctggaagaacaaaagagagcaaaggaatcaggaaaaaggaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgaca 13692603  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||||| |||||||| |||||||||||||||| | |||||||| ||||||    
T  13692602 tcatcagaagcaagttcatcagaagcatctcttcagaagcaagatcacc 13692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12366547 - 12366687
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaa-gtcaagttctcttgaaatgatgacgt 99  Q
    ||||||||| ||| |||||||||||||| ||||| ||||||||||||||| | | |||| ||||| | |||||  | |||| ||| |||| ||||||| |    
T  12366547 ctggaagaaaaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaatttaaagtgctcctgaagtgatgacat 12366646  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaa 140  Q
    |||| ||| |||| |||||| ||||||||||| ||||||||    
T  12366647 catcagaatcaagttcatcaaaagcatctcatcagaagcaa 12366687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 2500385 - 2500261
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 99  Q
    |||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||| |  |||| ||| |||| |||||||||    
T  2500385 tggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacgt 2500286  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    ||||  ||||||| |||||||||||    
T  2500285 catcataagcaagttcatcagaagc 2500261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48800438 - 48800515
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 78  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | ||||||||||    
T  48800438 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaa 48800515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 13018323 - 13018429
Alignment:
Q  3 ggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcat 102  Q
    ||||||||||| |||||||||||||| |||||| | ||||||| |||||| |||||||||||| | |||||||  ||| ||| |||| |||||||||| |    
T  13018323 ggaagaacaaa-gagagcaatggaatcaacaaggatgaagcttcaagcgtctgaagaaaagtgctcctgaagtttagtgctcctgaagtgatgacgtctt 13018421  T
Q  103 cggaagca 110  Q
    | ||||||    
T  13018422 cagaagca 13018429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 13649057 - 13648935
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||||| |||||||| ||||| ||||| ||||||| || | |||| |||||| ||||| | |||||| |||  || ||| |||| |||||||||||    
T  13649057 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtca 13648958  T
Q  102 tcggaagcaagatcatcagaagc 124  Q
    || |||||||||||| |||||||    
T  13648957 tcagaagcaagatcaacagaagc 13648935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 14426874 - 14426752
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  14426874 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 14426775  T
Q  101 atcggaagcaagatcatcagaag 123  Q
    ||| |||||||| ||||||||||    
T  14426774 atcagaagcaagttcatcagaag 14426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2913418 - 2913542
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| | |||||| |  |||| ||| |||| | ||||||    
T  2913418 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatatgaagagaagtgctcctgaagacaaaagtgctcctgaagtaatgacg 2913517  T
Q  99 tcatcggaagcaagatcatcagaag 123  Q
    |||||  ||||||| ||||||||||    
T  2913518 tcatcaaaagcaagttcatcagaag 2913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4494834 - 4494725
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||| || |||||||||| ||| ||||| ||||||||||||||| | | |||| ||||| | |||||||  ||| ||| |||| ||||||||||    
T  4494834 ctggaagaacgaaagagagcaatgaaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaagtatagtgctcctgaagtgatgacgtc 4494735  T
Q  101 atcggaagca 110  Q
    ||| ||||||    
T  4494734 atcagaagca 4494725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 16542835 - 16542955
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || |||||||| | |||| |||||||| || |||||||    
T  16542835 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagctt-aagcgtctgaagaaaactgcttctgaagacaaagtgctcttgaagtggtgacgtc 16542933  T
Q  101 atcggaagcaagatcatcagaa 122  Q
    ||| |||| ||| |||||||||    
T  16542934 atcagaagaaagttcatcagaa 16542955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 16622827 - 16622707
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || |||||||| | |||| |||||||| || |||||||    
T  16622827 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagctt-aagcgtctgaagaaaactgcttctgaagacaaagtgctcttgaagtggtgacgtc 16622729  T
Q  101 atcggaagcaagatcatcagaa 122  Q
    ||| |||| ||| |||||||||    
T  16622728 atcagaagaaagttcatcagaa 16622707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13890743 - 13890803
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaa 61  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||    
T  13890743 ctgggagaacaaatgaaagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaa 13890803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15088850 - 15088776
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  15088850 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 15088776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 16316433 - 16316503
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||| ||| |||| |||||| |||||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  16316433 aagtgctcctgaagtgatgatgtcatcagaagcaagttcatcagaagcatctcatcagaagcaagatcacc 16316503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 14193412 - 14193296
Alignment:
Q  25 gaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 122  Q
    |||| ||||| || |||||||||||||| |||||| ||| | | |||||| |||  || ||| |||| ||||||||||||| |||||||| |||||| ||    
T  14193412 gaatcaacaaaaatgaagcttgaagcgtctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcataa 14193313  T
Q  123 gcatctcattagaagca 139  Q
    |||||| || |||||||    
T  14193312 gcatcttatcagaagca 14193296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29935175 - 29935283
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||| | ||||| ||||| |||||||||| || ||| | |||| ||||  |||||||||||||| ||| |||| |||||| |||    
T  29935175 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaatcgtctcaagagaagt-tttctgaagtcaagtgctcctgaagtgatgatgtc 29935273  T
Q  101 atcggaagca 110  Q
    ||| ||||||    
T  29935274 atcagaagca 29935283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13137721 - 13137821
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||  | ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| ||| |||| |||||||||    
T  13137721 ctggaagaacaaaagagaggtaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacgt 13137820  T
Q  100 c 100  Q
    |    
T  13137821 c 13137821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22577817 - 22577967
Alignment:
Q  1 ctggaagaacaaatg-agagcaatggaattaacaagaaggaagcttgaagcgtgt--gaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 96  Q
    ||||||||||||| | |||||||  |||| ||||| |||||||||||||| |     ||||| ||||| | ||||||| || || ||| |||| ||||||    
T  22577817 ctggaagaacaaaaggagagcaaatgaatcaacaaaaaggaagcttgaagtgctccagaagagaagtgctcctgaagtaaaagtgctcctgaagtgatga 22577916  T
Q  97 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||||||  |||||||| |||||||||||||||||| ||| |||| ||||||    
T  22577917 cgtcattagaagcaaggtcatcagaagcatctcatcagaggcaagatcacc 22577967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13172194 - 13172239
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||    
T  13172194 ctggaagaacaaatgagagcaatagagttaacaaaaaggaagcttg 13172239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 30945189 - 30945310
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcat 102  Q
    ||||||||||  |||||||  || | ||||| |||||||||| || ||| ||||||||| || | |||||| ||| || ||| |||| || |||||||||    
T  30945189 gaagaacaaaaaagagcaaatgagtcaacaaaaaggaagcttaaaacgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtcat 30945288  T
Q  103 cggaagcaagatcatcagaagc 124  Q
    | |||||||| |||||||||||    
T  30945289 cagaagcaagttcatcagaagc 30945310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 9709631 - 9709739
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  ||||||||  |||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  9709631 tggaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 9709730  T
Q  101 atcggaagc 109  Q
    ||| |||||    
T  9709731 atcagaagc 9709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 11793266 - 11793130
Alignment:
Q  3 ggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca- 101  Q
    ||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||| | ||||| | |||||||  ||| ||| | || |||||||||||     
T  11793266 ggaagaacaaaagagagcgaaggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaagtttagtgctcctaaagtgatgacgtcat 11793167  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |   ||||||| |||||| || |||||||| ||||||    
T  11793166 taaaaagcaagttcatcataaacatctcatcagaagc 11793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 5000675 - 5000782
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 122  Q
    ||||| ||||| ||||||| ||||| | | |||||| ||||| | |||||||||| || ||| |||| ||| || |||||| ||||||||||  ||||||    
T  5000675 ggaatcaacaaaaaggaagtttgaaacatctgaagagaagtgatcctgaagtcaaagtgctcctgaagtgacgatgtcatcagaagcaagattgtcagaa 5000774  T
Q  123 gcatctca 130  Q
    ||||||||    
T  5000775 gcatctca 5000782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 21381287 - 21381374
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||| |||||| |||||||||||| | || ||||||| || ||  |||| ||||||||||||| ||||| || |||||||||||    
T  21381287 ggaagcttaaagcgtctgaagaaaagtgctcctaaagtcaaagtgcttctgaagtgatgacgtcatcagaagctagttcatcagaagc 21381374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 33691523 - 33691646
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||  |||||||| ||||| ||||| ||||||| || |||||| |||||| || || | |||||| | |||| ||| |||| || ||||||    
T  33691523 ctggaagaacaatagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagacaaagtgctcctgaagtggtgacgt 33691622  T
Q  100 catcggaagcaagatcatcagaag 123  Q
     ||| |||||||| |||| |||||    
T  33691623 tatcagaagcaagttcattagaag 33691646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 13303131 - 13303061
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||  |||| ||| |||| ||||||||||||  |||||||  |||||||||||||||||| ||||||    
T  13303131 tctgaagagaagtgctcctgaagtgatgacgtcattagaagcaacttcatcagaagcatctcatcagaagc 13303061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 15468200 - 15468146
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 131  Q
    |||| |||||||| ||||||||||||| |||||||| |||||| | |||||||||    
T  15468200 aagtgctcttgaagtgatgacgtcatcagaagcaagttcatcatatgcatctcat 15468146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16307532 - 16307575
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||    
T  16307532 ctggaagaacaaatgagagcaatggaatttaca--aaggaagcttg 16307575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 16316377 - 16316447
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||| |||||| | ||||| ||||| ||||||||||||||||| | |||| ||||| | |||||||    
T  16316377 aagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctaaagagaagtgctcctgaagt 16316447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 48062663 - 48062752
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||||||| |||||| ||||||||| || | |||||||   |||| ||| |||| |||||||| |||| |||||||| ||||||||||||    
T  48062663 ggaagcttaaagcgtctgaagaaaattgctcctgaagtgtgaagtgctcctgaagtgatgacgccatcagaagcaagttcatcagaagca 48062752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 27872019 - 27871931
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||| |||||| ||||||||| || | |||||||   |||| ||| |||| | ||||||||||| |||||||| |||||||||||    
T  27872019 ggaagcttaaagcgtctgaagaaaactgctcctgaagtgtgaagtgctcctgaagtaatgacgtcatcagaagcaagttcatcagaagc 27871931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21695731 - 21695667
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 65  Q
    ||||||||||||| |||||  | ||||| ||||| ||||||||||||| ||| |||||| |||||    
T  21695731 ctggaagaacaaaagagagttaaggaatcaacaaaaaggaagcttgaatcgtttgaagagaagtg 21695667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 24788403 - 24788347
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||||||| |||||||    
T  24788403 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagatcaccagaagc 24788347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 35952469 - 35952529
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  35952469 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 35952529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39284392 - 39284456
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagt 64  Q
    |||||||||||||| | |||  ||||||| ||||| |||||||||||||| || |||||||||||    
T  39284392 ctggaagaacaaattaagagatatggaatcaacaaaaaggaagcttgaagtgtctgaagaaaagt 39284456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 39284444 - 39284500
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||    
T  39284444 tctgaagaaaagtactcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 39284500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 43652 - 43798
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||||| | |||||||||| |||||||||| |||||| |||||||| ||||||||||    
T  43652 tggaagaacaaattagagcaatggaatcagcaagaaggaagcttgaagcatctgaagaaaagaggttctgaagttcaagtgctcttgaagtgatgacgtc 43751  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||| |||||||| |||||||||||| || || |||||||||||||||    
T  43752 atcagaagcaagttcatcagaagcacctaatcagaagcaacatcacc 43798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 244000 - 244146
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||||||||| ||| |||| ||||||||||    
T  244000 ctggaagaacaaattagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctgaagtcaagtgctcatgaagtgatgacgtc 244099  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||  ||||||| |||||| ||| | ||||| |||||||||||||||    
T  244100 atcaaaagcaagttcatcaaaagtacctcatcagaagcaacatcacc 244146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 220598 - 220464
Alignment:
Q  5 aagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    |||||||||| |||||| ||||||| ||||| |||||| |||||||||| |||||||||||| | |||||||||||| ||| |||| | |||||||||||    
T  220598 aagaacaaattgagagctatggaatcaacaaaaaggaaccttgaagcgtctgaagaaaagtgctcctgaagtcaagtgctcctgaagtaatgacgtcatc 220499  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagc 138  Q
     |||||||| |||||||||||| ||||| ||||||    
T  220498 agaagcaagttcatcagaagcacctcatcagaagc 220464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 377391 - 377443
Alignment:
Q  86 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  377391 tgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 377443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6642039 - 6641893
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||| | |||||||| ||| |||||||||||||| ||| |||| ||||||||||    
T  6642039 ctggaagaacaaatgagagcaatggagtcaacaagaaggaagcttgaagcatctgaagaaatgtgcttctgaagtcaagtgctcctgaagtgatgacgtc 6641940  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||  ||||||| |||||||||||| ||||| |||||||| ||||||    
T  6641939 atcataagcaagttcatcagaagcacctcatcagaagcaatatcacc 6641893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 14604660 - 14604805
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||||||||| ||| |||||| ||||| | |||||||| |||| ||| |||| | |||||||    
T  14604660 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtaatgacgt 14604759  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatca 145  Q
    |||| |||||||| |||||||||||||||||| |||||||| ||||    
T  14604760 catcagaagcaagttcatcagaagcatctcatcagaagcaagatca 14604805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 41114509 - 41114615
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||| |||||||||| ||||| |||||  |||| ||||||||||    
T  41114509 gaagaacaaatgagagcaatggaatcaacgagaaggaagcttgaagcatatgaagaaaagaggttctgaagacaagtgctcttagaatgctgacgtcatc 41114608  T
Q  104 ggaagca 110  Q
     ||||||    
T  41114609 agaagca 41114615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17540777 - 17540698
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||| |||||    
T  17540777 ctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctgaagacaagt 17540698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16632797 - 16632651
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    |||||| |||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | || ||||| |||| ||  |||| |||||||      
T  16632797 ctggaaaaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaagtcaaagtgcttctgaagtgatgacac 16632698  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    |||| |||||||| |||||| ||||||||||| |||||||| |||||    
T  16632697 catcagaagcaaggtcatcaaaagcatctcatcagaagcaagatcac 16632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 37435274 - 37435399
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaaatgatgacgt 99  Q
    ||||||||||||| ||||||||  |||| ||||| ||||||||||||||| | |||||| ||||| | ||||||| | ||| ||| |||| |||||||||    
T  37435274 ctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtaatagtgctcctgaagtgatgacgt 37435373  T
Q  100 catcggaagcaagatcatcagaagca 125  Q
    |||| |||||||| ||||||||||||    
T  37435374 catcagaagcaaggtcatcagaagca 37435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 56034917 - 56034792
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| ||||||||  |||| ||||| ||| ||||||||||||| |||||||||||| | |||||||  |||| ||  |||| |||||||||    
T  56034917 ctggaagaacaaaagagagcaaatgaatcaacaaaaagaaagcttgaagcgtctgaagaaaagtgatcctgaagtaaaagtgcttctgaagtgatgacgt 56034818  T
Q  100 catcggaagcaagatcatcagaagca 125  Q
     ||| |||||||| ||||||||||||    
T  56034817 aatcagaagcaagttcatcagaagca 56034792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 17787793 - 17787868
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaag 79  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |||||| ||| ||||    
T  17787793 gaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctaaagacaag 17787868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 45833753 - 45833615
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgt 99  Q
    |||||||||||| ||||||||  |||| ||||| ||||||||||||||| | |||| | ||| | | |||||| |||  || |||||||| |||||||||    
T  45833753 tggaagaacaaaagagagcaaacgaatcaacaaaaaggaagcttgaagcatctgaaaagaagcgctcctgaagacaaaagtgctcttgaagtgatgacgt 45833654  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| | |||| ||||||||||| ||||||    
T  45833653 catcagaagcaagtttatcataagcatctcatcagaagc 45833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15139587 - 15139449
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||| ||||||| ||||| |||||||||| ||||   |||||||||||| | || ||||||||| |||| ||| |||||| ||    
T  15139587 ctggaagaacaaattaagagctatggaatcaacaaaaaggaagctttaagcaattgaagaaaagtgctccttaagtcaagtgctctagaagtgatgatgt 15139488  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    | ||||||||||| |||| ||||||| ||| | ||||||    
T  15139487 cttcggaagcaagttcattagaagcacctcgtcagaagc 15139449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 29680314 - 29680421
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtcat 102  Q
    |||||||||| |||||||| ||||| ||||| ||||||||||||||  | |||||| ||||| | |||||||| |||| ||| |||| ||||||||||||    
T  29680314 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagtatctgaagagaagtgttcctgaagtcaaagtgctcctgaagtgatgacgtcat 29680413  T
Q  103 cggaagca 110  Q
    | ||||||    
T  29680414 cagaagca 29680421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 9141220 - 9141095
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 99  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||| | |||| |||||| ||||| | |||||| |  |||| ||| |||| |||||||||    
T  9141220 tggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgt 9141121  T
Q  100 catcggaagcaagatcatcagaagca 125  Q
    |||| || ||||| || |||||||||    
T  9141120 catcagatgcaagttcttcagaagca 9141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 11916075 - 11916006
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag 74  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||| |  ||||||||| ||||||||||    
T  11916075 aagaaaaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatccgaagaaaagaggttctgaag 11916006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11901574 - 11901528
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 47  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  11901574 ctggaagaacaaatgagaacaatggaattaacaaaaaggaagcttga 11901528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19620845 - 19620955
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| | ||| | |||||||| ||||  || |||| |||||||||    
T  19620845 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagacgtgctcctgaagtcaaagtgatcctgaagtgatgacgt 19620944  T
Q  100 catcggaagca 110  Q
    |||| ||||||    
T  19620945 catcagaagca 19620955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3395984 - 3395907
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 78  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| || || | ||||||||||    
T  3395984 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaa 3395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 10073280 - 10073208
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag 74  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| |||||||||||| | ||||||    
T  10073280 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaag 10073208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12601459 - 12601312
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| | || | |||||| ||||| | || ||| |  |||| ||| |||| |||||| |    
T  12601459 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcatctgaagagaagtgttccttaagacaaaagtgctcctgaagtgatgatg 12601360  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    |||||  |||||   |||| ||||||||||||| |||||||| |||||    
T  12601359 tcatcaaaagcattttcataagaagcatctcatcagaagcaagatcac 12601312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 19885048 - 19884922
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaag--aaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaa-tgatgac 97  Q
    |||||||| ||  |||||||||||||| |||||   |||||||||| |||||| ||||||||| || | |||||| ||| || ||||||||| ||  |||    
T  19885048 tggaagaataatagagagcaatggaatcaacaaaccaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcttgaaagtggcgac 19884949  T
Q  98 gtcatcggaagcaagatcatcagaagc 124  Q
    |||||| |||||||| |||||||||||    
T  19884948 gtcatcagaagcaagttcatcagaagc 19884922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12810947 - 12811021
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| ||| | |||  | ||||| |||||||||    
T  12810947 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgtagcatctgagcagaagtgcttctgaagt 12811021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 40846390 - 40846320
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||  |||| ||| |||| ||||||||||||| ||| |||| |||||||||||||||||| ||||||    
T  40846390 tctgaagaaaagtgctcctgaagtgatgacgtcatcagaaacaagttcatcagaagcatctcatcagaagc 40846320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 13575898 - 13576006
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  ||||||||  |||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  13575898 tggaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 13575997  T
Q  101 atcggaagc 109  Q
    ||| |||||    
T  13575998 atcagaagc 13576006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 54680255 - 54680147
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  54680255 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgctcctgaagacaaagtgctcctgaagtggtgacgtc 54680156  T
Q  101 atcggaagc 109  Q
    ||| |||||    
T  54680155 atcagaagc 54680147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 55380550 - 55380494
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||  |||| ||| |||| ||||||||||||| ||||||||||||||||||||    
T  55380550 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagatcatcagaagc 55380494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 10250177 - 10250134
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttga 47  Q
    |||||||||||||||||||||||||| | || ||||||||||||    
T  10250177 gaagaacaaatgagagcaatggaatttaaaaaaaggaagcttga 10250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 17398529 - 17398576
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| ||||||||||||| |||||||| |||||||||||    
T  17398529 aagtgctcttgaagtgatgacgtcatcagaagcaagttcatcagaagc 17398576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 40846438 - 40846367
Alignment:
Q  5 aagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    |||||||||| |||||  ||||||| ||||| ||||||||||||||| | |||||||||||| | |||||||    
T  40846438 aagaacaaattgagagttatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagt 40846367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 55380594 - 55380527
Alignment:
Q  8 aacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    |||||| |||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| | |||||||    
T  55380594 aacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagt 55380527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 6517746 - 6517704
Alignment:
Q  82 ctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||| ||||||||||||| |||||||| |||||||||||    
T  6517746 ctcttgaagtgatgacgtcatcagaagcaagttcatcagaagc 6517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 37435387 - 37435436
Alignment:
Q  98 gtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||| |||||||| |||||||||||||||||| ||| |||| ||||||    
T  37435387 gtcatcagaagcaagttcatcagaagcatctcatcagaggcaagatcacc 37435436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 29121732 - 29121608
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaagg-aagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    |||||||||||   ||||||| ||||| ||||| |||| |||||| || ||| ||||||||| ||   |||||| ||| || |||||||| ||||| |||    
T  29121732 tggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaaacgtctgaagaaaactgcacctgaagacaaagtgctcttgaagtgatggcgt 29121633  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| | |||||| |||||||||||    
T  29121632 catcagtagcaagttcatcagaagc 29121608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 10640222 - 10640351
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |||||||||||||||| ||| |||| |||||||||||    
T  10640222 tggaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatatgaagaaaagaggttctgaagtcaagtgctcctgaagtgatgacgtca 10640321  T
Q  102 tcggaagcaagatcatcagaagcatctcat 131  Q
    || |||||||| |||||||||||| |||||    
T  10640322 tcagaagcaagttcatcagaagcacctcat 10640351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 13435893 - 13435758
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatgacgtcatc 103  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | || ||||  |||| ||| |||| |||||||||||||    
T  13435893 aagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaagtaaaagtgctcctgaagtgatgacgtcatc 13435794  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagca 139  Q
     |||||||| |||||| ||||||||||| |||||||    
T  13435793 agaagcaagttcatcaaaagcatctcatcagaagca 13435758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 23284928 - 23284790
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||| | ||||||| ||||| ||||||||||||| | | |||||| ||||| | |||||||||||| ||  |||| |||||| |||    
T  23284928 ctggaagaacaaaagagaactatggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtcaagtgcttctgaagtgatgatgtc 23284829  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagca 139  Q
    ||| |||||||| |||| ||||||||||||| |||||||    
T  23284828 atcagaagcaagttcattagaagcatctcatcagaagca 23284790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 24117192 - 24117045
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||| |||||| | ||||| ||||| |||||||||| |||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||||||    
T  24117192 tggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacgtc 24117093  T
Q  101 atcggaagcaagatcatcagaagcatctc-attagaagcaacatcacc 147  Q
    ||| ||| |||| ||||||||||||||||  |||||||||| ||||||    
T  24117092 atcagaaacaagttcatcagaagcatctcggttagaagcaagatcacc 24117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 3680835 - 3680739
Alignment:
Q  7 gaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    ||||||| |||||||| | |||  ||||||||||||||| |||| | ||||||||||||||||||||||||||| ||  |||| |||||||||||||    
T  3680835 gaacaaaagagagcaaagaaatctacaagaaggaagcttaaagcatctgaagaaaagtggttctgaagtcaagtgctgctgaagtgatgacgtcatc 3680739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 9718205 - 9718071
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcat 102  Q
    |||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| || |  | |||||| ||| || |||||||| ||||||||||||    
T  9718205 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactactcctgaagacaaagtgctcttgaagtgatgacgtcat 9718106  T
Q  103 cggaagcaagatcatcagaagcatctcattagaag 137  Q
    | |||||||| | |||| ||||||| ||| |||||    
T  9718105 cagaagcaagtttatcataagcatcccatcagaag 9718071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 19470972 - 19470886
Alignment:
Q  60 aaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    |||||| | |||||||||||| ||| | || ||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||    
T  19470972 aaagtgctcctgaagtcaagtgctcctaaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagcaacatcac 19470886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 20112498 - 20112621
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||  ||| || ||||||| ||||| ||||||||||||||| | | |||| ||||| | || |||||||||  || |||| ||||||||||    
T  20112498 ctggaagaacaagagagggctatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctaaagtcaagtgttcatgaagtgatgacgtc 20112597  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| || ||||||||    
T  20112598 atcagaagcaagttcttcagaagc 20112621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19624327 - 19624217
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| ||| | || |||||||||    
T  19624327 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcctaaagtgatgacgt 19624228  T
Q  100 catcggaagca 110  Q
    |||| ||||||    
T  19624227 catcagaagca 19624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 26943859 - 26943781
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||    
T  26943859 tctgaaggaaagtgctcctgaagtgatgacgtcatcagaagcaagttcgtcagaagcacctcattagaagcaacatcac 26943781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14100257 - 14100366
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||| | || ||| ||||  | |||||||  ||| ||  |||| ||||||||||    
T  14100257 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctggagagaagtactcctgaagtatagtgcttctgaagtgatgacgtc 14100356  T
Q  101 atcggaagca 110  Q
    ||| ||||||    
T  14100357 atcagaagca 14100366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19086515 - 19086438
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 78  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| | ||||||||||    
T  19086515 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaa 19086438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 34451468 - 34451592
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| | ||| ||||||||||||||| | |||||| ||| | | |||||| |  |||| ||  |||| ||||||||    
T  34451468 ctggaagaacaaaagagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgcttctgaagtgatgacg 34451567  T
Q  99 tcatcggaagcaagatcatcagaag 123  Q
    ||||| |||||||| |||| |||||    
T  34451568 tcatcagaagcaagttcattagaag 34451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12715219 - 12715344
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| | ||| ||||| ||||||||||||||| | |||||| ||||| | |||||| |  ||||  ||  ||| ||||||||    
T  12715219 ctggaagaacaaaagagagcaaagaaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagacaaaagtgttc-cgaagtgatgacg 12715317  T
Q  99 tcatcggaagcaagatcatcagaagca 125  Q
    ||||| |||| ||| ||||||||||||    
T  12715318 tcatcagaaggaagttcatcagaagca 12715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 21235461 - 21235338
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  |||||||| |||||  |||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| |   ||||||    
T  21235461 tggaagaacaatagagagcaaaggaatctacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtagcgacgtc 21235362  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||||||||    
T  21235361 atcagaagcaagttcatcagaagc 21235338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 25597776 - 25597713
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 131  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  25597776 tctgaagagaagtgctcctgaagtgatgacgtcatctgaagcaagttcatcagaagcatctcat 25597713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 33351766 - 33351853
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||| |||||| ||||||||| || | |||||| ||| || |||||||| |||||| |||||| |||||||| |||||||||||    
T  33351766 ggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcttgaagtgatgatgtcatcagaagcaagttcatcagaagc 33351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 13602460 - 13602406
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 131  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  13602460 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcat 13602406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 21625460 - 21625325
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtca 101  Q
    |||||||||| ||||| ||  |||| |||||  |||||||||||||| | |||||| ||| | |||||||| |  |||| ||| |||| |||||||| ||    
T  21625460 gaagaacaaaagagagaaaatgaatcaacaaataggaagcttgaagcatctgaagagaagcgcttctgaagacaaaagtgctcctgaagtgatgacg-ca 21625362  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    || || ||||| |||||| ||||||||||| ||||||    
T  21625361 tcagaggcaagttcatcataagcatctcatcagaagc 21625325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25592883 - 25592838
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||    
T  25592883 ctggaagaacaaatgagagcaatggaatctacaaaaaggaagcttg 25592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26971994 - 26972071
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 78  Q
    ||||||||||||  |||||||| ||||| ||||| |||||| ||| |||||| |||||| || || ||||||||||||    
T  26971994 ctggaagaacaatggagagcaaaggaatcaacaaaaaggaatcttaaagcgtctgaagagaactgcttctgaagtcaa 26972071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19876151 - 19876107
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagctt 45  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  19876151 ctggaagaacaaatgagagaaatggattttacaagaaggaagctt 19876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16462437 - 16462480
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagct 44  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||    
T  16462437 ctggaagaacaaatgagaggaatggaatttacaaaaaggaagct 16462480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 20730505 - 20730628
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  |||||||| | ||| ||||| |||||||||| |||||| ||||||||| || |  ||||| | |||| ||| |||| |  |||||||    
T  20730505 tggaagaacaatagagagcaaagaaatcaacaaaaaggaagctttaagcgtctgaagaaaactgctcatgaagacaaagtgctcctgaagtagtgacgtc 20730604  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||| ||||    
T  20730605 atcagaagcaagttcatcataagc 20730628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 23298302 - 23298259
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttga 47  Q
    |||||||||||||||||||||||||  |||| ||||||||||||    
T  23298302 gaagaacaaatgagagcaatggaatctacaaaaaggaagcttga 23298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13602520 - 13602446
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| ||||| || ||||| ||||| |||||||||| || ||| |||||| ||||| | |||||||    
T  13602520 ctggaagaacaaaagagagaaaaggaatcaacaaaaaggaagcttaaaccgtttgaagagaagtgctcctgaagt 13602446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19689081 - 19689023
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 59  Q
    ||||||||||||| ||||||||  |||| ||||| ||||||| ||||||||| ||||||    
T  19689081 ctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagtttgaagcgtctgaaga 19689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 15302533 - 15302418
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa---gttctcttgaaatgatgacgtc 100  Q
    |||||| ||| |||||||| ||||| ||||| | |||| ||| | |||| |||||| ||||| | |||||| |||   || ||| |||| ||||||||||    
T  15302533 gaagaaaaaaagagagcaaaggaatcaacaaaatggaaacttaaggcgtctgaagagaagtgctcctgaagacaaaaagtgctcctgaagtgatgacgtc 15302434  T
Q  101 atcggaagcaagatca 116  Q
    ||| ||||||||||||    
T  15302433 atcagaagcaagatca 15302418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 15987552 - 15987495
Alignment:
Q  8 aacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 65  Q
    |||||| |||||| | ||||| ||||| ||||||||||||||| | ||||||||||||    
T  15987552 aacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtg 15987495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18171817 - 18171862
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||    
T  18171817 ctggaagaacaaataagagcaatggaatttacaaaaagcaagcttg 18171862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23005839 - 23005884
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  23005839 ctggaagaacacatgagagcaatggaatttacaaaaagaaagcttg 23005884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23782527 - 23782482
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  23782527 ctggaagaacacatgagagcaatggaatttacaaaaagaaagcttg 23782482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24718552 - 24718597
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||    
T  24718552 ctggaagaacaaatgagagcaataaaatttacaaaaaggaagcttg 24718597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 26943906 - 26943861
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagc 50  Q
    ||||||||||||||||||||| || ||||||||||  |||||||||    
T  26943906 aagaacaaatgagagcaatgggatcaacaagaaggttgcttgaagc 26943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 32544632 - 32544575
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 59  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| ||||||    
T  32544632 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 32544575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 16264954 - 16265074
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatc 103  Q
    ||||||||  |||||||| ||||| ||||| |||||| | | |||| | ||||||||| || | |||||| ||| || ||| |||| ||  |||||||||    
T  16264954 aagaacaatagagagcaaaggaatcaacaaaaaggaatcctaaagcatctgaagaaaactgctcctgaagacaaagtgctcctgaagtggcgacgtcatc 16265053  T
Q  104 ggaagcaagatcatcagaagc 124  Q
     |||||||| |||||||||||    
T  16265054 agaagcaagttcatcagaagc 16265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 24728352 - 24728396
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||    
T  24728352 tggaagaacaaatgagagcaataaaatttacaaaaaggaagcttg 24728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 8e-41; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16199607 - 16199752
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||| | |||||||||||| | |||||||||||| ||| |||| ||||||||||    
T  16199607 ctggaggaacaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaagaaaagtgctcctgaagtcaagtgctcctgaactgatgacgtc 16199706  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    ||| |||||||| |||| ||||||| ||||| ||||||||||||||    
T  16199707 atcagaagcaagttcataagaagcacctcatcagaagcaacatcac 16199752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 41495338 - 41495202
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| |||||||||| |||| ||| |||| |||||| ||    
T  41495338 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgcttctgaagtcaaagtgctcatgaagtgatgatgt 41495239  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaa 136  Q
    |||| |||||||| |||||||||||||||||| ||||    
T  41495238 catcagaagcaagttcatcagaagcatctcatcagaa 41495202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15903563 - 15903425
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | || ||||| |||| ||  |||| |||||||||    
T  15903563 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctccttaagtcaaagtgcttctgaagtgatgacgt 15903464  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| ||||||||| |||||||| ||||||    
T  15903463 catcagaagcaagttcatcagaaccatctcatcagaagc 15903425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19249208 - 19249318
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatgacgt 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||| | ||||||||||||||||||||| |||| | ||| |||| |||||||||    
T  19249208 ctggaagaacaaatgagagcactggaatcaacaagaatgaagcttgaagcatctgaagaaaagtggttctgaagttcaaatgctcctgaagtgatgacgt 19249307  T
Q  100 catcggaagca 110  Q
    |||| ||||||    
T  19249308 catcagaagca 19249318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 52920769 - 52920631
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||| ||||| | ||||||| || || ||| |||| |||||||||    
T  52920769 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtaaaagtgctcctgaagtgatgacgt 52920670  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| |||||||||||||||||| ||||||    
T  52920669 catcagaagcaagttcatcagaagcatctcatcagaagc 52920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 13824398 - 13824256
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtg--tgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgac 97  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||| |    |||||| ||||| | ||||||| || || ||| |||| |||||||    
T  13824398 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagtgctcctgaagagaagtgctcctgaagtaaaagtgctcctgaagtgatgac 13824299  T
Q  98 gtcatcggaagcaagatcatcagaagcatctcattagaagcaa 140  Q
    |||||| |||||||| |||||||||||||||||||||| ||||    
T  13824298 gtcatcagaagcaagttcatcagaagcatctcattagatgcaa 13824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 20646516 - 20646381
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcat 102  Q
    |||||||||| |||||||| ||||| ||||| | |||||||| |||||| |||||| ||||| | |||||||||| ||  || |||| ||||||||||||    
T  20646516 gaagaacaaaagagagcaaaggaatcaacaaaatggaagcttaaagcgtttgaagagaagtgctcctgaagtcaaagtgttcatgaagtgatgacgtcat 20646417  T
Q  103 cggaagcaagatcatcagaagcatctcattagaagc 138  Q
    | |||||||| |||||||||||||||||| ||||||    
T  20646416 cagaagcaagttcatcagaagcatctcatcagaagc 20646381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 14392801 - 14392947
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||  ||||||||||||||| | |||||| ||||| | ||||||| || || ||| |||| |||||||||    
T  14392801 ctggaagaacaaaagagagctaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctgaagttaaagtgctcctgaagtgatgacgt 14392900  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    |||| ||||||||||||||| ||||||||||| | |||||| |||||    
T  14392901 catcagaagcaagatcatcataagcatctcatcaaaagcaagatcac 14392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 22803899 - 22804033
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||| | | |||||| ||||| | ||||||| |||| ||| | || |||||||||||||    
T  22803899 gaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaaacatttgaagagaagtgctcctgaagttaagtgctcctaaagtgatgacgtcatc 22803998  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagc 138  Q
      ||||||| || ||||||||||||||| ||||||    
T  22803999 aaaagcaagttcctcagaagcatctcatcagaagc 22804033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 6091096 - 6090957
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||||| ||| ||||| || |||||||||||| | |||||| ||||| | |||||| | |||| ||| |||| | |||||||    
T  6091096 ctggaagaacaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctgaagagaagtgctcctgaagttaaagtgctcatgaagttatgacgt 6090997  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagca 139  Q
    |||| |||||||| |||||| ||||||||||| |||||||    
T  6090996 catcagaagcaagttcatcaaaagcatctcatcagaagca 6090957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 20725452 - 20725301
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaag---------ttctcttgaaatgatg 95  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |||||| ||||||||         | |||||||| |||||    
T  20725452 aagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctaaagtcaagtgcttctgatgctcttgaagtgatg 20725353  T
Q  96 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    | |||||| |||||||| |||||| ||||| ||||| | ||| |||||||||    
T  20725352 atgtcatcagaagcaagttcatcataagcacctcatcaaaagaaacatcacc 20725301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 17238753 - 17238871
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 104  Q
    ||||||||| |||||| | ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||||||||| ||  |||| |||||||||||||     
T  17238753 aagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaagtgcttctgaagtgatgacgtcatca 17238852  T
Q  105 gaagcaagatcatcagaag 123  Q
    |||||||||||| ||||||    
T  17238853 gaagcaagatcaccagaag 17238871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12962896 - 12963021
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||  | | ||||| ||||| ||||||||||||||||| |||||| ||||| |  ||||||||| || |||||||| |||||||||    
T  12962896 ctggaagaacaaaagaggactaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctattgaagtcaaagtgctcttgaagtgatgacgt 12962995  T
Q  100 catcggaagcaagatcatcagaagca 125  Q
    |||| |||||||| ||||||||||||    
T  12962996 catcagaagcaagttcatcagaagca 12963021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 37467662 - 37467541
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtcatc 103  Q
    ||||||||| |||| ||||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||  ||| |||| |||||||||||||    
T  37467662 aagaacaaaagagaacaatggaatcaacaaaaaggaagcttgaagcatctgaagataagtgctcctgaagtcaaagagctcctgaagtgatgacgtcatc 37467563  T
Q  104 ggaagcaagatcatcagaagca 125  Q
     |||||||||||| ||||||||    
T  37467562 agaagcaagatcaccagaagca 37467541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 31303753 - 31303612
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacg- 98  Q
    ||||||||||||| ||||||||  |||| ||||| |||||||||| |||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||||     
T  31303753 ctggaagaacaaaagagagcaaaagaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacgt 31303654  T
Q  99 --tcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
      ||||| |||||||| |||||||||||||||||| ||||||    
T  31303653 catcatcagaagcaagttcatcagaagcatctcatcagaagc 31303612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 13948700 - 13948562
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagtt-ctcttgaaatgatgacgt 99  Q
    |||||| |||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| |  |||||||||  | ||| |||| |||||||||    
T  13948700 ctggaaaaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtcaaaatgctcatgaagtgatgacgt 13948601  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| | |||||||||||||||| ||||||    
T  13948600 catcagaagcaagtttatcagaagcatctcatcagaagc 13948562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 29951234 - 29951371
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||| | | | | ||||| ||||||||||||||| | || |||| |||| | |||||||||||| ||| |||| ||||||||||    
T  29951234 ctggaagaacaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagtcaagtgctcctgaagtgatgacgtc 29951333  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagc 138  Q
     || |||||||| |||||||||||| || || ||||||    
T  29951334 ttcagaagcaagttcatcagaagcaccttatcagaagc 29951371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30000388 - 30000525
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||| | | | | ||||| ||||||||||||||| | || |||| |||| | |||||||||||| ||| |||| ||||||||||    
T  30000388 ctggaagaacaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagtcaagtgctcctgaagtgatgacgtc 30000487  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagc 138  Q
     || |||||||| |||||||||||| || || ||||||    
T  30000488 ttcagaagcaagttcatcagaagcaccttatcagaagc 30000525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 26417489 - 26417547
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  26417489 gaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaa 26417547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 49642574 - 49642648
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  49642574 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 49642648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 12388676 - 12388731
Alignment:
Q  6 agaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaa 61  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  12388676 agaacatatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaa 12388731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 25398098 - 25398208
Alignment:
Q  30 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt--caagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatc 127  Q
    ||||| ||| ||||||||||| | |||||| ||| | | ||||||   ||||| ||| |||| ||| ||||||||| |||||||| ||||||||||||||    
T  25398098 aacaaaaagaaagcttgaagcatttgaagagaagcgctcctgaagatacaagtgctcctgaagtgacgacgtcatcagaagcaagttcatcagaagcatc 25398197  T
Q  128 tcattagaagc 138  Q
    |||||||||||    
T  25398198 tcattagaagc 25398208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 4243002 - 4243047
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 47  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  4243002 tggaagaacaaatgagagcaatggaatttacaaaaaggaagcttga 4243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8728821 - 8728866
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  8728821 ctggaagaacaaatgagagcaatggaatttacaaaaaggaagcttg 8728866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9080708 - 9080753
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  9080708 ctggaagaacaaatgagagcaatggaatttacaaaaaggaagcttg 9080753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 12388730 - 12388799
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    |||| ||| |||| ||||||||||||| |||||||| |||||| ||||| ||||| ||||||||||||||    
T  12388730 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcataagcacctcatcagaagcaacatcac 12388799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 16032842 - 16032770
Alignment:
Q  3 ggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||| ||||||| |||||| ||||| || |||||||||||| | |||||||||||| | |||||||    
T  16032842 ggaagaacaaaagagagcattggaatcaacaaaaatgaagcttgaagcatctgaagaaaagtgctcctgaagt 16032770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 12968700 - 12968626
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaag 79  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| || ||||||||| | ||| ||||| ||||    
T  12968700 gaagaacaaatgagggtaatggaatcaacaagaaggaagcttgaag-gtctgaagaaaaatagttgtgaagacaag 12968626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 47405247 - 47405356
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 99  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| |  |||| ||| |||| | |||||||    
T  47405247 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaaagtgctcctgaagtaatgacgt 47405346  T
Q  100 catcggaagc 109  Q
    |||| |||||    
T  47405347 catcagaagc 47405356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14073048 - 14073003
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||    
T  14073048 ctggaagaacaaatgagagcaatggaatctacaaaaaggaagcttg 14073003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 20627275 - 20627348
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| |||| |||| || |||||||||    
T  20627275 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaacaaaactgcttctgaagt 20627348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 28582471 - 28582346
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    ||||||||||||  ||||| || | ||| ||||| |||||||||| || ||| |||||| || || | |||||| ||| || ||| |||| || ||||||    
T  28582471 ctggaagaacaatagagagtaaagaaatcaacaaaaaggaagcttaaaacgtctgaagagaactgctcctgaagacaaagtgctcctgaagtggtgacgt 28582372  T
Q  100 catcggaagcaagatcatcagaagca 125  Q
    |||| |||||||| ||||||||||||    
T  28582371 catcagaagcaagttcatcagaagca 28582346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 2561514 - 2561414
Alignment:
Q  25 gaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaag 123  Q
    |||| ||||| |||||||||| |||||| |||||| || || | |||||| ||| || |||||||| || |||| ||||| |||||||| ||||||||||    
T  2561514 gaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagacaaagtgctcttgaagtggtgacatcatcagaagcaagttcatcagaag 2561415  T
Q  124 c 124  Q
    |    
T  2561414 c 2561414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 49642648 - 49642695
Alignment:
Q  91 tgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    ||||||||  ||| |||||||| |||||||||||||||||||||||||    
T  49642648 tgatgacgcaatcagaagcaaggtcatcagaagcatctcattagaagc 49642695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 40800189 - 40800116
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    |||||||| ||  |||||||| | ||| ||||| |||||||||| |||||| |||||||||||| | |||||||    
T  40800189 tggaagaataatagagagcaaagaaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaagt 40800116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 2785366 - 2785318
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  2785366 aagtgctcctgaagtgatgacgtcatctgaagcaaggtcatcagaagca 2785318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 21636552 - 21636600
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  21636552 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 21636600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 47208073 - 47208013
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    |||||||||||  ||||||||  |||| ||||| |||||||||| |||||| |||||||||    
T  47208073 tggaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 47208013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 49666288 - 49666336
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  49666288 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 49666336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 50300581 - 50300521
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  50300581 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 50300521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 41009 - 40863
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||| | | |||||||||||||||||||| |||||  ||| |||| || ||| |||    
T  41009 ctggaagaacaaatgagagcaatggaatcaacaaaaaggaagtttgaaccatctgaagaaaagtggttctgaactcaagggctcctgaagtggtgatgtc 40910  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||| |||| |||||||||||||||| |||||||||||||||||||||    
T  40909 atcagaagtaagatcatcagaagcacctcattagaagcaacatcacc 40863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 177 - 412
Target Start/End: Original strand, 14326 - 14582
Alignment:
Q  177 attctgcagcagtgtgtataacattgtgcatgtcactgctattctatctatctattttgc-----atcatataattttaattgttgttaccagcaaaatt 271  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||||     |||||||||||||||||||||||||||||||||||    
T  14326 attctgcagcggtgtgtataacattgtgtacgtcactgctattctatctatctcttttgcatcatatcatataattttaattgttgttaccagcaaaatt 14425  T
Q  272 ag------------gcttttattttgagcagctttagcatgttgccttaatattgaaattaatt---ttacaaaccaaaaacgatatca-ttttttgaca 355  Q
     |            |||| || |||||||| |||||||||| ||| ||||||||||||| ||||   ||||||| |||||| ||||||| |||||| |||    
T  14426 gggcctatgttgttgcttgtagtttgagcaactttagcatgctgctttaatattgaaataaatttaattacaaaacaaaaaagatatcatttttttaaca 14525  T
Q  356 ata-aaatgatgctatttgttaaaattgtaaaatatataaaggataattaatatattt 412  Q
    ||| |||||||| | |||| |||| |||||||||||||||| |||||||| |||||||    
T  14526 atagaaatgatg-tctttggtaaagttgtaaaatatataaacgataattattatattt 14582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 441 - 605
Target Start/End: Original strand, 14588 - 14754
Alignment:
Q  441 tgttaattaaaaatatgcaagtgtgtatgtttgttttctcttttagagggactaacgttgaattg-gaagtgtagaatttattttaacatgcttgcttg- 538  Q
    |||||| ||||||||||||| |||| ||||||| ||||  |||||||||| |||||||||||||  |  || || |||| |||||||| || ||| ||      
T  14588 tgttaaataaaaatatgcaaatgtgaatgtttggtttcaattttagaggggctaacgttgaatttaggggtataaaattgattttaacttgtttgttttt 14687  T
Q  539 aagtagaattggattagtaaatttgattatataactcaattctctacgtaactttgactcgtttgat 605  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |  ||||||||||| ||||||    
T  14688 aagtaaaattggattagtaaatttgattatataacttaattctctgcccaactttgactcatttgat 14754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21191596 - 21191741
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||||||| | |||||||||||| | |||||||||||| ||| |||| ||||||||||    
T  21191596 ctggaagaacaaacgagagcattggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgctcctgaagtcaagtcctcctgaagtgatgacgtc 21191695  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    ||| |||||||| ||||| |||||||||||| |||| ||| |||||    
T  21191696 atcagaagcaagttcatctgaagcatctcatcagaaacaatatcac 21191741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17024698 - 17024822
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||| |||||| |||| |||| ||  |||| |||| |||||    
T  17024698 ctggaagaacaaatgagatcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctaaagttaagtgcttctgaagtgataacgtc 17024797  T
Q  101 atcggaagcaagatcatcagaagca 125  Q
    ||| |||||||| ||||||||||||    
T  17024798 atcagaagcaagttcatcagaagca 17024822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 12613527 - 12613658
Alignment:
Q  16 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatc 115  Q
    ||||| ||||||| ||||| ||||||||||||||| | ||||||| |||| |||||||||||||| ||| |||| ||||||||||||| |||||||| ||    
T  12613527 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaatagtgattctgaagtcaagtgctcctgaagtgatgacgtcatcagaagcaagttc 12613626  T
Q  116 atcagaagcatctcattagaagcaacatcacc 147  Q
    || |||| || ||||| |||||||||||||||    
T  12613627 attagaaccacctcatcagaagcaacatcacc 12613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18896304 - 18896383
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 80  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||| | |||||||||| |||||||||| |||||    
T  18896304 ctggaagaacaaatgagagcaatggaatcaacaagaaggaagcatgaagcatctgaagaaaagaggttctgaagacaagt 18896383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26701859 - 26701981
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||| ||||||| ||||  | ||||||||||||||| |||||||||||| | |||||||||||| ||| |||| ||||||| |    
T  26701859 ctggaagaacaaattaagagctatggaatcaacataagggaagcttgaagcgtatgaagaaaagtgctcctgaagtcaagtgctcatgaagtgatgacat 26701958  T
Q  100 catcggaagcaagatcatcagaa 122  Q
    |||| |||||||| |||||||||    
T  26701959 catcagaagcaagttcatcagaa 26701981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16235027 - 16235152
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag--tcaagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||| | ||||| | ||||||   ||||| ||| |||| ||||||||    
T  16235027 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaagacacaagtgctcctgaagtgatgacg 16235126  T
Q  99 tcatcggaagcaagatcatcagaagc 124  Q
    ||||| |||| ||| |||||||||||    
T  16235127 tcatcagaagtaagttcatcagaagc 16235152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2268892 - 2268749
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacg 98  Q
    ||||||||||||| ||||||||  |||| | ||| ||||||| ||| ||| | |||||| ||| | | |||||| |||  || ||| |||| ||||||||    
T  2268892 ctggaagaacaaaagagagcaaatgaatcatcaaaaaggaagtttgtagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacg 2268793  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaaca 142  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  2268792 tcatcagaagcaagttcatcagaagcatctcatcagaagcaaca 2268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 22599898 - 22600036
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 99  Q
    |||||||||||| ||||||||  |||| ||||| ||||||||||||||| | |||||| ||| | | |||||| |  |||| ||| |||| ||||||| |    
T  22599898 tggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacat 22599997  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| | |||||||||||||||| ||||||    
T  22599998 catcagaagcaagtttatcagaagcatctcatcagaagc 22600036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 21029113 - 21029019
Alignment:
Q  30 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    ||||| |||||||||| |||| | |||||||||||| | || ||||||||| ||| |||| |||||||||||||  ||||||| |||||||||||    
T  21029113 aacaaaaaggaagcttaaagcatatgaagaaaagtgctcctcaagtcaagtgctcctgaagtgatgacgtcatcaaaagcaagttcatcagaagc 21029019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 33256071 - 33256216
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||| | |||||||| ||||| ||||| || ||||||| | |||| |||||| ||||| |  ||||| |||  || ||| |||| ||||||| | |    
T  33256071 gaagaacagaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacatta 33256170  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    || |||||||| |||||||||||||||||| |||||||| ||||||    
T  33256171 tcagaagcaagttcatcagaagcatctcatcagaagcaagatcacc 33256216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 33276243 - 33276388
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||| | |||||||| ||||| ||||| || ||||||| | |||| |||||| ||||| |  ||||| |||  || ||| |||| ||||||| | |    
T  33276243 gaagaacagaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacatta 33276342  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    || |||||||| |||||||||||||||||| |||||||| ||||||    
T  33276343 tcagaagcaagttcatcagaagcatctcatcagaagcaagatcacc 33276388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 10757764 - 10757645
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 104  Q
    ||||||||| |||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| |  ||||||  ||| ||| | || |||||||||||||     
T  10757764 aagaacaaaagagagctaaggaatcaacaa-aaggaagcttgaagcgtttgaagagaagtgctcttgaagtttagtgctcctaaagtgatgacgtcatca 10757666  T
Q  105 gaagcaagatcatcagaagca 125  Q
    | |||||| ||||||||||||    
T  10757665 ggagcaagttcatcagaagca 10757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 19717818 - 19717739
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||||  |||| ||| |||| |||||||||||||  ||||||| |||||||||||||||||| |||||||| ||||||    
T  19717818 tctgaagagaagtgctcctgaagtgatgacgtcatcataagcaagttcatcagaagcatctcatcagaagcaagatcacc 19717739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 35402143 - 35402033
Alignment:
Q  30 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca--agttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatc 127  Q
    ||||| ||||||||||||||| | |||||| ||| | | |||||| ||  ||| ||| |||| ||||||| ||||| |||||||| ||||||||||||||    
T  35402143 aacaaaaaggaagcttgaagcatatgaagagaagcgctcctgaagacacaagtgctcctgaagtgatgacctcatcagaagcaagttcatcagaagcatc 35402044  T
Q  128 tcattagaagc 138  Q
    |||| ||||||    
T  35402043 tcatcagaagc 35402033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 12284780 - 12284678
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 122  Q
    ||||| ||||| ||||||||||||| | | |||||| ||||| | |||||||||| || ||  |||| ||||||||||||| |||||||| |||||||||    
T  12284780 ggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtcaaagtgcttctgaagtgatgacgtcatcagaagcaagttcatcagaa 12284681  T
Q  123 gca 125  Q
    |||    
T  12284680 gca 12284678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22154238 - 22154162
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca 77  Q
    ||||||||||||| ||||||||  |||| ||||| || |||||||||||||| |||||| ||||| | |||||||||    
T  22154238 ctggaagaacaaaagagagcaaatgaatcaacaaaaatgaagcttgaagcgtctgaagagaagtgctcctgaagtca 22154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 30893413 - 30893310
Alignment:
Q  14 tgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaag 112  Q
    ||||||| | ||||| |||||  ||||| |||||||| | |||||| ||||| | |||||||||| || ||| |||| ||||||||||||| ||||||||    
T  30893413 tgagagctaaggaatcaacaaagaggaaacttgaagcatctgaagagaagtgctcctgaagtcaaagtactcctgaagtgatgacgtcatcagaagcaag 30893314  T
Q  113 atca 116  Q
    ||||    
T  30893313 atca 30893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36134538 - 36134480
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 59  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||    
T  36134538 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaaga 36134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 20954173 - 20954234
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 65  Q
    |||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| |||||    
T  20954173 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtg 20954234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 2267419 - 2267296
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaaatgatgacgtc 100  Q
    |||||||||||  ||||| || | ||| ||||| |||||||||| |||| | ||||||||| || |||||||| || ||| ||| |||| |  |||||||    
T  2267419 tggaagaacaatagagagtaaagaaatcaacaaaaaggaagcttaaagcatatgaagaaaactgcttctgaagacatagtgctcctgaagtagtgacgtc 2267320  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||  |||||||| |||||||||||    
T  2267319 attagaagcaagttcatcagaagc 2267296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 23036273 - 23036383
Alignment:
Q  30 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag--tcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatc 127  Q
    ||||| ||||||||||||||| | |||| | ||| | | ||||||   ||||| ||| |||| ||||||| ||||| |||||||  ||||||||||||||    
T  23036273 aacaaaaaggaagcttgaagcatctgaatagaagcgctcctgaagacacaagtgctcctgaagtgatgacatcatcagaagcaatttcatcagaagcatc 23036372  T
Q  128 tcattagaagc 138  Q
    |||| ||||||    
T  23036373 tcatcagaagc 23036383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 1090272 - 1090314
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||||||||||||||| |||| |||| ||||||    
T  1090272 gaagaacaaatgagagcaatggaatttacaaaaagggagcttg 1090314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1900697 - 1900639
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 59  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| || ||| ||||||    
T  1900697 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaaga 1900639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19717869 - 19717795
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| ||| |||| ||||| || || |||||||||| |||||| |||||| ||||| | |||||||    
T  19717869 ctggaagaacaaaagagggcaaaggaatcaataaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagt 19717795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 24227707 - 24227749
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||||||||||||||  |||| |||||||||||    
T  24227707 gaagaacaaatgagagcaatggaatctacaaaaaggaagcttg 24227749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 46089307 - 46089218
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||||||| ||| || ||||||||| || |  |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  46089307 ggaagcttaaagtgtctgaagaaaactgctcatgaagtctgaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 46089218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48704564 - 48704490
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||||||| ||| ||||| || |||||||||||| | | |||| ||||| | |||||||    
T  48704564 ctggaagaacaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctaaagagaagtgctcctgaagt 48704490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20109691 - 20109736
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||||||| |||||||||  |||| |||||||||||    
T  20109691 ctggaagaacaaatgagaacaatggaatctacaaaaaggaagcttg 20109736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 20954266 - 20954327
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| ||| |||| ||||||||||||| ||  |||| |||||||||||||||||| ||||||    
T  20954266 aagtgctcctgaagtgatgacgtcatcagattcaagttcatcagaagcatctcatcagaagc 20954327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 21134986 - 21135023
Alignment:
Q  86 tgaaatgatgacgtcatcggaagcaagatcatcagaag 123  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  21134986 tgaaatgatgacgtcatcagaagcaagttcatcagaag 21135023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 6351 - 6230
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| | ||||||||||||  || |||| |||||||||||||    
T  6351 gaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgctcctgaagtcaagtgttcctgaagtgatgacgtcatc 6252  T
Q  104 ggaagcaagatcatcagaagca 125  Q
     |||||||| ||||||||||||    
T  6251 agaagcaagttcatcagaagca 6230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18730770 - 18730914
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||    
T  18730770 ctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaagttctcatgaaatgatgacgt 18730869  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatc 144  Q
    |||| |||||||| | ||||||||||  |||| |||||| |||||    
T  18730870 catcagaagcaagttgatcagaagcacttcatcagaagctacatc 18730914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 18685205 - 18685328
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||    
T  18685205 ctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaagttctcatgaaatgatgacgt 18685304  T
Q  100 catcggaagcaagatcatcagaag 123  Q
    |||| |||||||| | ||||||||    
T  18685305 catcagaagcaagttgatcagaag 18685328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 20382194 - 20382337
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtcatc 103  Q
    ||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||| ||||| | |||||||| |||| ||| |||| |||||||||||||    
T  20382194 aagaacaaaagagagtaatggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacgtcatc 20382293  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
      ||||||| |||||||||||||||||| |||||||| ||||||    
T  20382294 aaaagcaagttcatcagaagcatctcatcagaagcaagatcacc 20382337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 19707858 - 19707720
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||||  | |||||||||||| | ||||||| |||| ||| |||| ||||||| |||    
T  19707858 tggaagaacaaatgagggcaatggaatcaacaaaaaggaagcttgaagaatctgaagaaaagtgctcctgaagttaagtgctcctgaagtgatgacatca 19707759  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagcaa 140  Q
    || |||||||| |||| ||||||| ||||||||||||||    
T  19707758 tcagaagcaagttcattagaagcacctcattagaagcaa 19707720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18722425 - 18722569
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||| ||||||||| ||||    
T  18722425 ctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaagttctcatgaaatgatcacgt 18722524  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatc 144  Q
    |||  |||||||| | ||||||||||  |||| |||||| |||||    
T  18722525 cattagaagcaagttgatcagaagcacttcatcagaagctacatc 18722569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 19956145 - 19956270
Alignment:
Q  1 ctggaagaacaaatgagagcaat-ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||| |||||  ||||||||| ||||| ||| |||| |||||||||    
T  19956145 ctggaagaacaaatgagagcaattggaatcaacaagaaggaaacttgaagcgtctgaaaaaaagatgttctgaagacaagtgctcctgaagtgatgacgt 19956244  T
Q  100 catcggaagcaagatcatcagaagca 125  Q
    |||| ||||||| |||| || |||||    
T  19956245 catcagaagcaaaatcaccataagca 19956270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17267828 - 17267681
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| |||||   |||||||| |||| ||  |||| |||||||||    
T  17267828 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgtgcctgaagtcaaagtgcttctgaagtgatgacgt 17267729  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
     ||  |||||||| |||||| ||||||||||| |||||||| ||||||    
T  17267728 tattagaagcaagttcatcaaaagcatctcatcagaagcaagatcacc 17267681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 19943591 - 19943456
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaac-aagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcat 102  Q
    |||||||||| ||||| |||||||| ||| || || |||||||||||| | |||||| ||||| | |||||||  ||| ||| |||| |||||||| |||    
T  19943591 gaagaacaaaagagagtaatggaatcaaccaaaaaagaagcttgaagcatctgaagagaagtgctcctgaagtatagtgctcctgaagtgatgacgacat 19943492  T
Q  103 cggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||||| |||||||||||||||||| ||||||    
T  19943491 cggaagcaagttcatcagaagcatctcatcagaagc 19943456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 17914816 - 17914678
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    ||||||||| ||| |||||||| ||||| ||||  ||||||||||||||| | |||||| ||||| | || ||||||| || |||||||| | |||||||    
T  17914816 ctggaagaataaaagagagcaaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctaaagtcaaagtgctcttgaagtaatgacgt 17914717  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||  |||||||| |||||||||||||||||| ||||||    
T  17914716 cattagaagcaagttcatcagaagcatctcatcagaagc 17914678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 19156536 - 19156415
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcat 102  Q
    |||||||||| |||||||| || || ||||| |||||||||| |||||| |||||| ||||| | |||||||||| || ||| |||| ||||||| ||||    
T  19156536 gaagaacaaaagagagcaaagggatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacatcat 19156437  T
Q  103 cggaagcaagatcatcagaagc 124  Q
    | |||||||| |||||||||||    
T  19156436 cagaagcaagttcatcagaagc 19156415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 24646693 - 24646557
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    |||||||||||| || | ||||||||| ||||| ||||||||||||||| | |  ||| ||||| | |||||||  ||| ||  |||| |||||||||||    
T  24646693 tggaagaacaaaagataccaatggaatcaacaaaaaggaagcttgaagcatctagagagaagtgctcctgaagtatagtgcttctgaagtgatgacgtca 24646594  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    || |||||||| ||||||||||||||| || ||||||    
T  24646593 tcagaagcaagttcatcagaagcatcttatcagaagc 24646557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 602529 - 602652
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||| | |||| ||| | | |||||||| ||| ||| |||| ||||||||||    
T  602529 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctaaagagaagcgttgctgaagtctagtgctcctgaagtgatgacgtc 602628  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||| ||||    
T  602629 atcagaagcaagttcatcaaaagc 602652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 22461428 - 22461503
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 80  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||| |||| ||||| |||||    
T  22461428 aagaacaaaagagagcaatggaatcaacaagaaggaagcttgaaacgtctgaagaaaagaggttttgaagacaagt 22461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17441617 - 17441727
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||| | |||||||||| |||||| |||||| ||||| | |||||||| |||| ||| |||| |||||||||    
T  17441617 ctggaagaacaaaagagagcaaaggaatcaacgaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacgt 17441716  T
Q  100 catcggaagca 110  Q
    |||| ||||||    
T  17441717 catcagaagca 17441727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20255362 - 20255500
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    |||||| |||||| |||||||| ||||| ||||| ||||||| || |||||| |||||| || || | |||||||||| || ||| |||| |||||||||    
T  20255362 ctggaacaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagtcaaagtgctcctgaagtgatgacgt 20255461  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    ||||  ||| ||| |||||||||| ||||||| ||||||    
T  20255462 catcataaggaagttcatcagaagtatctcatcagaagc 20255500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16681100 - 16681245
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacg 98  Q
    ||||||||||||  || |||||  |||| ||||| || ||||||| |||||| |||||| ||||| | |||||| |||  || ||| |||| ||||||||    
T  16681100 ctggaagaacaa--gatagcaaatgaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacg 16681197  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    ||||| |||||||| |||||||||||||||||| | |||||| |||||    
T  16681198 tcatcagaagcaagttcatcagaagcatctcatcataagcaagatcac 16681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 33083213 - 33083065
Alignment:
Q  2 tggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacg 98  Q
    ||||||||| ||| |||||| ||||||| ||||| || ||||||| |||||| |||||| ||||| |  |||||||||  || |||||||| ||||||||    
T  33083213 tggaagaacgaattgagagctatggaatcaacaaaaaagaagcttaaagcgtctgaagagaagtgctcttgaagtcaaaagtgctcttgaagtgatgacg 33083114  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||||  ||| |||| ||||| |||||| ||||| |||||||| ||||||    
T  33083113 tcattagaaacaagttcatctgaagcaactcatcagaagcaagatcacc 33083065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 18772982 - 18772906
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 80  Q
    |||||||||||||||||||||||||  |||| |||||| |||||||| | |||||||||| |||||||||| |||||    
T  18772982 gaagaacaaatgagagcaatggaatctacaaaaaggaaacttgaagcatttgaagaaaagaggttctgaagacaagt 18772906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 29693671 - 29693541
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa---gttctcttgaaatgatgacgtc 100  Q
    |||||||||| |||||||  ||||| ||||| |||||||||| |||| | |||||| ||||| |  ||||| |||   || ||| |||| ||||||||||    
T  29693671 gaagaacaaaagagagcagaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagacaaaaagtgctcctgaagtgatgacgtc 29693572  T
Q  101 atcggaagcaagatcatcagaagcatctcat 131  Q
    ||| |||||||| ||||||||||||||||||    
T  29693571 atcagaagcaagttcatcagaagcatctcat 29693541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 17525528 - 17525671
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgat-gacgtcatc 103  Q
    ||||||||| |||||||| | ||| ||||| || |||| ||||||| | |||| | ||||| | |||||| ||||| ||| |||| |||| ||| |||||    
T  17525528 aagaacaaaagagagcaaagaaatcaacaaaaatgaagattgaagcatctgaaaagaagtgctcctgaagacaagtgctcctgaagtgattgacatcatc 17525627  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
     |||||||| || ||||||||||||||| |||||||| ||||||    
T  17525628 agaagcaagttcgtcagaagcatctcatcagaagcaagatcacc 17525671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 39693892 - 39693754
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    |||||||||| || ||||||||  |||| ||||| || ||||||| |||| |  ||||| ||||| |||||||||| |||| | | |||| |||||||||    
T  39693892 ctggaagaacgaaagagagcaaatgaatcaacaaaaaagaagcttaaagcatccgaagagaagtgcttctgaagtcaaagtgcacctgaagtgatgacgt 39693793  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| ||| |||| |||||| |||||| |||| ||||||    
T  39693792 catcagaaacaagttcatcaaaagcatgtcatcagaagc 39693754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16189356 - 16189267
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaa 89  Q
    ||||||||||||| ||||||||  |||| ||||| ||||||||||||||||| |||||| ||||| |  |||||||| ||| ||||||||    
T  16189356 ctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcttgaagtcacagtgctcttgaa 16189267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17702083 - 17702006
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 78  Q
    |||||| |||||| |||||  ||||||| ||||| ||||||||||||||| | |||||| ||||| ||||||||||||    
T  17702083 ctggaataacaaaagagagttatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaagtcaa 17702006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 16189248 - 16189192
Alignment:
Q  91 tgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||||||| ||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  16189248 tgatgacatcatcagaagcaagttcatcagaagtatctcattagaagcaagatcacc 16189192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 23263493 - 23263552
Alignment:
Q  86 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatca 145  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||| ||||    
T  23263493 tgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagcaagatca 23263552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18120918 - 18121028
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| ||||||||  |||| ||||| |||||||||| |||||| |||||| || || | |||||| | |||| ||| |||| ||||||||     
T  18120918 ctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtttgaagagaactgctcctgaagacaaagtgctcctgaagtgatgacgc 18121017  T
Q  100 catcggaagca 110  Q
    |||| ||||||    
T  18121018 catcagaagca 18121028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 18680132 - 18680031
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 122  Q
    ||||| ||||| |||||||||| |||| | |||||| | ||| | |||||||||| || ||| |||| ||||||||||||| |||||||| |||||||||    
T  18680132 ggaatcaacaaaaaggaagctttaagcatctgaagaga-gtgctcctgaagtcaaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaa 18680034  T
Q  123 gca 125  Q
    |||    
T  18680033 gca 18680031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 22745776 - 22745706
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||  |||| ||| |||| |||||||||| || |||||||| |||||||||||||||||| ||||||    
T  22745776 tctgaagagaagtgctcatgaagtgatgacgtcgtcagaagcaagttcatcagaagcatctcatcagaagc 22745706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21933258 - 21933181
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 78  Q
    ||||||||||||  |||||||| ||||| ||||| |||||||||| |||||| |||||| || || | ||||||||||    
T  21933258 ctggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaa 21933181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 30421237 - 30421297
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    |||||||||||  |||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  30421237 tggaagaacaatagagagcaaaggaattaacaaaaaggaagcttaaagcgtctgaacaaaa 30421297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18320985 - 18321059
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| || ||| ||||||| ||||| || |||||||||||| | |||||| ||||| | |||||||    
T  18320985 ctggaagaacaaaagatagctatggaatcaacaaaaaagaagcttgaagcatctgaagagaagtgctcctgaagt 18321059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 23772721 - 23772679
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||||||||||||||  |||| |||||||||||    
T  23772721 gaagaacaaatgagagcaatggaatctacaaaaaggaagcttg 23772679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22745827 - 22745763
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 65  Q
    |||||||||||||  ||||||| ||||| ||||| |||||||||| ||| || |||||| |||||    
T  22745827 ctggaagaacaaaaaagagcaaaggaatcaacaaaaaggaagcttaaagtgtctgaagagaagtg 22745763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 36105489 - 36105441
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  36105489 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 36105441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 40845260 - 40845308
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  40845260 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 40845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 43640053 - 43640005
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  43640053 aagtgctcatgaagtgatgacgtcatcagaagcaagttcatcagaagca 43640005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 43645189 - 43645081
Alignment:
Q  2 tggaagaacaaatga-gagcaatggaattaacaagaag-gaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| | |||| ||||||| ||||| ||  |||||||||||| | ||||||| || | | |||||||  ||| ||| |||| |||||||||    
T  43645189 tggaagaacaaattaagagctatggaatcaacaaaaaaagaagcttgaagcatctgaagaatagcgctcctgaagtttagtgctcctgaagtgatgacgt 43645090  T
Q  100 catcggaag 108  Q
    |||||||||    
T  43645089 catcggaag 43645081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 22272488 - 22272342
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||   |||||||||| | |||||||||||| | ||| |||| ||||||||||    
T  22272488 ctggaagaacaaatgagagcaatggaatcaacaagaaggaaggttgaagcaactgaagaaaagagtttctgaagtcaaatactcctgaagtgatgacgtc 22272389  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||  ||| |||| ||||||||| || ||||| |||||||||||||||    
T  22272388 attagaaacaagttcatcagaaacacctcatcagaagcaacatcacc 22272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 24850410 - 24850544
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    |||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||||||||| | |||||||||||| ||| |||| | |||||||| ||    
T  24850410 gaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtcaagtgctcctgaagtaatgacgtcgtc 24850509  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagc 138  Q
     |||||||| |||||||||||| ||||| ||||||    
T  24850510 agaagcaagttcatcagaagcacctcatcagaagc 24850544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44881507 - 44881398
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| | || ||||||||||| ||| |||| || |||||||    
T  44881507 ctggaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaagaaaagagattttgaagtcaagtgctcctgaagtgctgacgtc 44881408  T
Q  101 atcggaagca 110  Q
    ||| ||||||    
T  44881407 atcagaagca 44881398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 23235363 - 23235228
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcat 102  Q
    |||||||||| ||||||||| |||| ||||| ||| |||||| |||||| |||||| ||||| |  ||||||||| || ||| |||| ||||||||||||    
T  23235363 gaagaacaaaagagagcaattgaatcaacaaaaagtaagcttaaagcgtctgaagagaagtgctcttgaagtcaaagtgctcctgaagtgatgacgtcat 23235264  T
Q  103 cggaagcaagatcatcagaagcatctcattagaagc 138  Q
    | |||||||| |||||||||||||||||| ||||||    
T  23235263 cagaagcaagttcatcagaagcatctcatcagaagc 23235228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22454731 - 22454869
Alignment:
Q  1 ctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| | |||| ||| ||| ||||| ||||||||||||||| | |||||||||||| | |||||||| ||| |||||||| |||| ||||    
T  22454731 ctggaagaacaaattaagagctatgaaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtctagtgctcttgaagtgataacgt 22454830  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    | || |||||||| |||||||||||| ||||| ||||||    
T  22454831 cgtcagaagcaagctcatcagaagcacctcatcagaagc 22454869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30667348 - 30667210
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 99  Q
    ||||||||||||  ||||||||| |||| ||||| ||||||||||||||| | |||||| ||||| | | |||||||| || ||| |||| |||||||||    
T  30667348 ctggaagaacaatagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcccgaagtcaaagtgctcctgaagtgatgacgt 30667249  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| || ||||||||||||||| ||||||    
T  30667248 catcagaagcaagttcgtcagaagcatctcatcagaagc 30667210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19115483 - 19115411
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaa 73  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||||    
T  19115483 ctggaagaacaaatgagagcaatggaatcaacaggaaggaagcttgaagcgtctgaagaaaagaggttctgaa 19115411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 39037397 - 39037521
Alignment:
Q  1 ctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||||| |||||| ||||||| ||||| ||||||||||||||| | |||||| ||||| | ||||||| |||| ||  |||| |||||||||    
T  39037397 ctggaagaacaaattgagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctactgaagttaagtgcttctgaagtgatgacgt 39037496  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||||||||||    
T  39037497 catcagaagcaagttcatcagaagc 39037521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 25829463 - 25829338
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||| |  |||| ||| |||| ||||||||    
T  25829463 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacg 25829364  T
Q  99 tcatcggaagcaagatcatcagaagc 124  Q
    ||||| |||||||||||| |||||||    
T  25829363 tcatcagaagcaagatcaccagaagc 25829338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26618848 - 26618920
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaa 73  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| |||| ||||    
T  26618848 ctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagagtctgaagaaaagaggttatgaa 26618920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 19540756 - 19540648
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    |||||||||||| |||||| | ||||| ||||| ||| |||||| |||||| |||||||||||| | |||||||| ||| ||| |||| |||||||||||    
T  19540756 tggaagaacaaaagagagctaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaagtgttcctgaagtctagtgctcctgaagtgatgacgtca 19540657  T
Q  102 tcggaagca 110  Q
    || ||||||    
T  19540656 tcagaagca 19540648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9015112 - 9015251
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| | ||||||||||||| | |||||| ||||| |  ||||||  ||||  || |||| |||||||||    
T  9015112 ctggaagaacaaaagagagcaaaggaatcaacaaaatggaagcttgaagcatctgaagagaagtgctcttgaagtaaaagtgatcctgaagtgatgacgt 9015211  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagca 139  Q
    |||| |||||||| ||||||||| || ||||| |||||||    
T  9015212 catcagaagcaagttcatcagaaacaactcatcagaagca 9015251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 22260761 - 22260616
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaag--ttctcttgaaatgatgacgtca 101  Q
    |||||||||| |||||||| ||||| ||||| ||||||| || | |||| |||||| ||||| | |||||| |||   | ||| |||| |||||||||||    
T  22260761 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaaatgctcctgaagtgatgacgtca 22260662  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    || |||||||| |||||| ||||||||||| ||||| || ||||||    
T  22260661 tcagaagcaagttcatcaaaagcatctcatcagaaggaagatcacc 22260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18430680 - 18430753
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag 74  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||| ||| ||| ||||||    
T  18430680 ctggaagaacaaatgagagcaatataatcaacaagaaggaagcttgaagcgtatgaagacaagaggtcctgaag 18430753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 40782806 - 40782681
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaa-gtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcaga 121  Q
    ||||| ||||| ||||||||||||||| | |||||| ||||| | ||||| ||||| || ||| |||| ||||||||||||| |||||||| ||| ||||    
T  40782806 ggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaaagtcaaagtgctcctgaagtgatgacgtcatcagaagcaagttcaccaga 40782707  T
Q  122 agcatctcattagaagcaacatcacc 147  Q
    ||||| |||| |||||||| ||||||    
T  40782706 agcatttcatcagaagcaagatcacc 40782681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24576408 - 24576284
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||| ||| | |||||||||||| ||||| ||||||||||||| | | |||||| ||||| |  ||||||| |||| ||  |||| |||||||||    
T  24576408 ctggaagaaaaaaagggagcaatggaatcaacaaaaaggaagcttgaaacatatgaagataagtgttcatgaagtcaaagtgcttctgaagtgatgacgt 24576309  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||||||||||    
T  24576308 catcagaagcaaggtcatcagaagc 24576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 18703127 - 18703064
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggtt 68  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  18703127 aagaacaagttagagcaatggaatcaacaagaaggaagcttgaagcgtctgaagaaaagaggtt 18703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 20151792 - 20151915
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  |||||||| | ||||||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| ||||||  |||||||    
T  20151792 tggaagaacaatagagagcaaagtaattaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaaatagtgacgtc 20151891  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| ||| |||| |||||||||||    
T  20151892 atcagaaacaagttcatcagaagc 20151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 41121498 - 41121569
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||| ||| | |||||||    
T  41121498 gaagaacaaatgaaagcaatggaataaacaagaaggaagcttgaagcatctgaagaaaggtgctcctgaagt 41121569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 28140399 - 28140515
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtcatcggaagcaagatcatcaga 121  Q
    ||||| ||||| ||||||||||  | ||| |||||| ||||| | ||||||||||  || ||| |||| |||||||||||||  ||||||| ||||||||    
T  28140399 ggaatcaacaaaaaggaagcttagaacgtctgaagagaagtgctcctgaagtcaaaagtgctcctgaagtgatgacgtcatcaaaagcaagttcatcaga 28140498  T
Q  122 agcatctcattagaagc 138  Q
    |||||||||| ||||||    
T  28140499 agcatctcatcagaagc 28140515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 20568493 - 20568628
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||||| ||||| || ||||| ||||| |||||||||| |  ||| |||||| ||||| | |||||| |||  || ||| |||  |||||||||||    
T  20568493 gaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaagacgtctgaagataagtgctcctgaagacaaaagtgctcatgaggtgatgacgtca 20568592  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaag 137  Q
    |  |||||||| |||||||||||||||||| |||||    
T  20568593 tttgaagcaagttcatcagaagcatctcataagaag 20568628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 10009560 - 10009639
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||||||||| ||||| || ||||||    
T  10009560 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagaaagatcacc 10009639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 21536991 - 21537126
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    |||||||||||| |||||| ||| ||| ||||| |||||| ||| ||   | |||||| ||||| | |||||||| ||| ||| |||| | |||||||||    
T  21536991 tggaagaacaaaagagagctatgaaatcaacaaaaaggaaacttaaaatatctgaagagaagtgctcctgaagtctagtgctcctgaagtaatgacgtca 21537090  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaag 137  Q
    || |||||||| ||| |||||||| ||||| |||||    
T  21537091 tcagaagcaagctcaccagaagcacctcatcagaag 21537126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 22187911 - 22187981
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  22187911 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 22187981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 38781670 - 38781618
Alignment:
Q  86 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  38781670 tgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 38781618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 6573880 - 6574003
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  | |||||| ||||||||||| |||||||||| || | | ||||||||| || |||||||| | |||| ||| | || |  |||||||    
T  6573880 tggaagaacaatagggagcaaaggaattaacaaaaaggaagcttaaaacatctgaagaaaaatgcttctgaagacaaagtgctcctaaagtagtgacgtc 6573979  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||||||||    
T  6573980 atcagaagcaagttcatcagaagc 6574003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18376678 - 18376752
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||||||||||| | ||||||||| || | |||||||    
T  18376678 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaaatgctcctgaagt 18376752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38781739 - 38781681
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 59  Q
    ||||||||||||| ||||||||| |||| ||||| ||||||||||||||| | ||||||    
T  38781739 ctggaagaacaaaagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaaga 38781681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30621546 - 30621437
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||  |||||||||||||| ||||| |||||||||| |||| | | |||| ||||| |   |||||| |||| ||| |||| |||||||||    
T  30621546 ctggaagaacaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtcaaagtgctcctgaagtgatgacgt 30621447  T
Q  100 catcggaagc 109  Q
    |||| |||||    
T  30621446 catcagaagc 30621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30624167 - 30624058
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||  |||||||||||||| ||||| |||||||||| |||| | | |||| ||||| |   |||||| |||| ||| |||| |||||||||    
T  30624167 ctggaagaacaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtcaaagtgctcctgaagtgatgacgt 30624068  T
Q  100 catcggaagc 109  Q
    |||| |||||    
T  30624067 catcagaagc 30624058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20569818 - 20569774
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagctt 45  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||    
T  20569818 ctggaagaacaaatgagagcaatggaatctacaaaaaggaagctt 20569774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 44840687 - 44840639
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||||||||||||||||    
T  44840687 aagtgctcctgaagtgatgacgtcatcagaagcaagatcatcagaagca 44840639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 23184103 - 23184162
Alignment:
Q  16 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||| ||||||| ||||| ||||||||||||||| | |||||||||||| | |||||||    
T  23184103 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagt 23184162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 23595360 - 23595419
Alignment:
Q  16 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||| ||||||| ||||| ||||||||||||||| | |||||||||||| | |||||||    
T  23595360 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagt 23595419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 7609214 - 7609172
Alignment:
Q  105 gaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||||| |||||||||||||||||| |||||||| ||||||    
T  7609214 gaagcaagttcatcagaagcatctcatcagaagcaagatcacc 7609172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 24440509 - 24440551
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||| ||||||||||||||| |||| |||||||||||    
T  24440509 gaagaacaaacgagagcaatggaatttacaaaaaggaagcttg 24440551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 25037096 - 25037138
Alignment:
Q  96 acgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  25037096 acgtcatcagaagcaagttcatcagaagcatctcatcagaagc 25037138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 25041203 - 25041245
Alignment:
Q  96 acgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  25041203 acgtcatcagaagcaagttcatcagaagcatctcatcagaagc 25041245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 22187861 - 22187934
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||  ||||||| ||||| | ||| ||||||||||||||| | |||||| ||||| | |||||||    
T  22187861 tggaagaacaaaatagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 22187934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24302697 - 24302742
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 46  Q
    |||||||||||||||||||||||| |||| |||| |||| ||||||    
T  24302697 ctggaagaacaaatgagagcaatgaaatttacaaaaagggagcttg 24302742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 33074507 - 33074459
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  33074507 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 33074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 35929 - 36080
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa-----gtggttctgaagtcaagttctcttgaaatgatg 95  Q
    ||||||||||||||||||||||| |||| ||||||| ||||| ||||||  | |||||||||     | | |||||||||||| | |||||||| |||||    
T  35929 ctggaagaacaaatgagagcaatagaatcaacaagatggaagtttgaaggatttgaagaaaaaaaaagagcttctgaagtcaaatgctcttgaagtgatg 36028  T
Q  96 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||||| |||||||| |||||||||||| ||||| |||||||||||||||    
T  36029 acgtcatcagaagcaagttcatcagaagcacctcatcagaagcaacatcacc 36080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 25498 - 25546
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  25498 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 25546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 18368 - 18498
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||||||    
T  18368 tggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcatgaagtgatgacgtc 18467  T
Q  101 atcggaagcaagatcatcagaagcatctcat 131  Q
    ||| |||||||| ||||||||||||||||||    
T  18468 atcagaagcaagttcatcagaagcatctcat 18498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 19221 - 19367
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaa-ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||| |||||| | ||| | ||||| || ||||||||||||||| |||||| ||||| | |||||||||||| ||| |||| |||| |||||    
T  19221 tggaagaacaaaagagagctaaggagtcaacaaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaagtgctcctgaagtgataacgtc 19320  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  19321 atcagaagcaagttcatcagaagcatctcataagaagcaagatcacc 19367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 66; Significance: 7e-29; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 159432 - 159288
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||  ||||| |  ||| ||  ||| ||| |||| ||||||||||    
T  159432 ctggaagaacaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaag-gaagtgctcatgatgtttagtgctcctgaagtgatgacgtc 159334  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagcaacatcac 146  Q
    ||| |||||||| |||||||||||| ||||| ||||||||||||||    
T  159333 atcagaagcaagttcatcagaagcacctcatcagaagcaacatcac 159288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 39776 - 39652
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| |||||||| | || |||     
T  39776 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcttgaagtcataacga 39677  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||||||||||    
T  39676 catcagaagcaagttcatcagaagc 39652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 137836 - 137712
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| |||||||| | || |||     
T  137836 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcttgaagtcataacga 137737  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||||||||||    
T  137736 catcagaagcaagttcatcagaagc 137712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 212718 - 212573
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||||||||| ||| |||||| ||||| | |||||||| |||| ||| |||| | |||||||    
T  212718 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtaatgacgt 212619  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagcaacatca 145  Q
    |||| |||||||| |||||||||||||||||| |||||||| ||||    
T  212618 catcagaagcaagttcatcagaagcatctcatcagaagcaagatca 212573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 10154 - 10011
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtcatc 103  Q
    ||||||||| ||||| |||||||| ||||| ||||||||||||||| | |||||| || || |||||||||| |||| ||| |||| |||||||||||||    
T  10154 aagaacaaaagagaggaatggaatcaacaaaaaggaagcttgaagcatctgaagagaaatgcttctgaagtcaaagtgctcctgaagtgatgacgtcatc 10055  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
     |||||||| | |||||||||||||||| | |||||| ||||||    
T  10054 agaagcaagttaatcagaagcatctcatcataagcaagatcacc 10011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 642488 - 642615
Alignment:
Q  5 aagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    |||||||||| |||||| |||||||  |||| ||||||||||||||||| |||||||||||| | |||||||||||| ||  |||| |||||||||||||    
T  642488 aagaacaaattgagagctatggaatcgacaaaaaggaagcttgaagcgtctgaagaaaagtgatcctgaagtcaagtgcttctgaagtgatgacgtcatc 642587  T
Q  104 ggaagcaagatcatcagaagcatctcat 131  Q
     |||||||| |||||||||||| |||||    
T  642588 agaagcaagttcatcagaagcacctcat 642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 23881423 - 23881289
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 103  Q
    |||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||||| |  ||||||| | | ||| |||| ||||||| |||||    
T  23881423 gaagaacaaaagatagcaatggaatcaacaagaatgaagcttgaagcgtctgaagaaaagtgctcttgaagtctactgctcctgaagtgatgacatcatc 23881324  T
Q  104 ggaagcaagatcatcagaagcatctcattagaagc 138  Q
     |||||||| |||||||||||| ||||| ||||||    
T  23881323 agaagcaaggtcatcagaagcacctcatcagaagc 23881289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 21099482 - 21099619
Alignment:
Q  2 tggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| | |||| ||||||| ||||| ||||| ||||||||||| |||||||||||| |  ||||||||||| ||| |||| ||||||||||    
T  21099482 tggaagaacaaattaagagccatggaatcaacaaaaaggaggcttgaagcgtctgaagaaaagtgctcatgaagtcaagtgctcctgaagtgatgacgtc 21099581  T
Q  101 atcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    ||| |||||||| |||||| ||||| ||||| ||||||    
T  21099582 atcagaagcaagttcatcaaaagcacctcatcagaagc 21099619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 89229 - 89352
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| |||||||||||||| || |||||| ||||| |||||||||| |||| ||  |||| |||||||||    
T  89229 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagtgtctgaagagaagtgcttctgaagtcaaagtgctactgaagtgatgacgt 89328  T
Q  100 catcggaagcaagatcatcagaag 123  Q
    |||| |||||||||||| ||||||    
T  89329 catcagaagcaagatcaccagaag 89352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17815328 - 17815180
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacg 98  Q
    ||||||||||||| ||||| || ||||| ||||| |||||||||| || | | |||||| ||||| | |||||| |||  || ||| |||| ||||||||    
T  17815328 ctggaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaaacatctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacg 17815229  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||||| | |||||| |||||||||||||||||| |||||||| ||||||    
T  17815228 tcatcagtagcaagttcatcagaagcatctcatcagaagcaagatcacc 17815180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 21910884 - 21910762
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||||| ||||||||  |||| ||||| |||||||||| |||||| |||||| ||||| | |||||| |||  || ||| |||| |||||||||||    
T  21910884 gaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacgtca 21910785  T
Q  102 tcggaagcaagatcatcagaagc 124  Q
    || |||||||||||| |||||||    
T  21910784 tcagaagcaagatcaccagaagc 21910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 26784699 - 26784577
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 101  Q
    |||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||| |||  || ||| |||| | |||||||||    
T  26784699 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtcatgacgtca 26784600  T
Q  102 tcggaagcaagatcatcagaagc 124  Q
    || |||||||| |||||||||||    
T  26784599 tcagaagcaagttcatcagaagc 26784577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 9398551 - 9398659
Alignment:
Q  16 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatc 115  Q
    ||||| ||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||||||| ||| |||| |||||||||||||   | |||| ||    
T  9398551 agagctatggaatcaacaaaaaggaagcttgaagcatttgaagagaagtgctgctgaagtcaagtgctcctgaagtgatgacgtcatcaacatcaagttc 9398650  T
Q  116 atcagaagc 124  Q
    |||||||||    
T  9398651 atcagaagc 9398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 6499578 - 6499480
Alignment:
Q  5 aagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcat 102  Q
    |||||||||| |||||| ||| ||| ||||| ||||||||||||||| | |||| | ||||| |||||||||||||| ||| |||| ||||||||||||    
T  6499578 aagaacaaattgagagctatgaaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgtttctgaagtcaagtgctcatgaagtgatgacgtcat 6499480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 33023008 - 33022885
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| || ||| |||| |||| || | |||||| | |||| || ||||| || |||||||    
T  33023008 tggaagaacaatcgagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaaaaaaactgctcctgaagacaaagtgcttttgaagtggtgacgtc 33022909  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||||||||    
T  33022908 atcagaagcaagttcatcagaagc 33022885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 5430228 - 5430106
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| ||||||  ||||||||||| | |||||| | |||| ||  |||| || |||||||    
T  5430228 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtccgaagaaaagtgctcctgaagacaaagtgcttctgaagtggtgacgtc 5430129  T
Q  101 atcggaagcaagatcatcagaag 123  Q
    ||| |||||||| ||||||||||    
T  5430128 atcagaagcaagttcatcagaag 5430106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23412783 - 23412857
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  23412783 ctggaagagcaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 23412857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 4887367 - 4887243
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaagg-aagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatgacgt 99  Q
    |||||||||||  |||||||| ||||| ||||| |||| |||||| |||||| ||||||||| || | || ||| | |||| ||| |||| |||||||||    
T  4887367 tggaagaacaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgttcctaaagataaagtgctcctgaagtgatgacgt 4887268  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||| ||||||    
T  4887267 catcagaagcaagttcattagaagc 4887243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12352610 - 12352685
Alignment:
Q  1 ctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    |||||||||||||| |||||| ||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  12352610 ctggaagaacaaattgagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 12352685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 19536155 - 19536218
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaa 140  Q
    |||| ||| |||| ||||||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  19536155 aagtgctcctgaagtgatgacgtcatcagaagtaagttcatcagaagcatctcatcagaagcaa 19536218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20551223 - 20551148
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaac-aagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||||||||||| ||| || ||||||||||||||| | |||||| ||||| | |||||||    
T  20551223 ctggaagaacaaaagagagcaatggaatcaacaaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 20551148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 25096608 - 25096663
Alignment:
Q  6 agaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaa 61  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||| | ||||||||    
T  25096608 agaacaaatgagagcaatgaaatcaacaagaaggaagtttgaagcatctgaagaaa 25096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 25154578 - 25154633
Alignment:
Q  6 agaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaa 61  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||| | ||||||||    
T  25154578 agaacaaatgagagcaatgaaatcaacaagaaggaagtttgaagcatctgaagaaa 25154633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 20551171 - 20551101
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  20551171 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagctcattagaagcatctcatcagaagc 20551101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 25096662 - 25096732
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||| ||| |||| ||||||||||||| |||||||| |||||||||||| | | | |||||||||||||||    
T  25096662 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaccccgtcagaagcaacatcacc 25096732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 25154632 - 25154702
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||| ||| |||| ||||||||||||| |||||||| |||||||||||| | | | |||||||||||||||    
T  25154632 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaccccgtcagaagcaacatcacc 25154702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 29138222 - 29138310
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||||||| |||||| ||||||||| || | |||||| ||| || ||| || | ||||||||||||| |||||||| ||||||||||||    
T  29138222 ggaagcttaaagcgtctgaagaaaactgttcctgaagacaaagtgctcctgtagtgatgacgtcatcagaagcaagttcatcagaagca 29138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 21072037 - 21072142
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 104  Q
    |||||||||  ||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| |  |||| |  ||| ||| |||| |||||| ||||||     
T  21072037 aagaacaaaaaagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcatgaaatttagtgctcctgaagtgatgaggtcatca 21072136  T
Q  105 gaagca 110  Q
    ||||||    
T  21072137 gaagca 21072142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 23412834 - 23412891
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  23412834 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 23412891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 30115704 - 30115792
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||||||| |||||| ||||||||| || | |||||||   |||| ||| |||| ||||||||||||  |||||||| |||||||||||    
T  30115704 ggaagcttaaagcgtctgaagaaaactgctcctgaagtttgaagtgctcctgaagtgatgacgtcattagaagcaagttcatcagaagc 30115792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 7745443 - 7745503
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 65  Q
    ||||||||| ||||||||  | || ||||| ||||||||||||||||| |||||| |||||    
T  7745443 aagaacaaaagagagcaaatggatcaacaaaaaggaagcttgaagcgtctgaagagaagtg 7745503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 31118220 - 31118160
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  31118220 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 31118160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20717 - 20855
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||| |||||| ||||| | ||||||| | ||| ||| |||| |||||||||    
T  20717 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctgaagagaagtgctcctgaagtaatagtgctcctgaagtgatgacgt 20816  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| ||| |||| |||||||||||||||||||||||||    
T  20817 catcagaaacaagttcatcagaagcatctcattagaagc 20855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5437 - 5586
Alignment:
Q  1 ctggaagaacaaa-tgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||||  |||| ||| | |||||| |||||||||| |||||| ||||| | ||||||| || || ||| |||| ||||||||    
T  5437 ctggaagaacaaaatgagagcaaatgaatcaactaaaaggaaccttgaagcgtctgaagagaagtgctcctgaagtaaaagtgctcctgaagtgatgacg 5536  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacct 148  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| |||||||    
T  5537 tcatcagaagcaagttcatcagaagcatctcactagaagcaagatcacct 5586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4693 - 4824
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||| ||||||| | |||||| ||||| | |||||||| |||| ||| |||| |||||| ||    
T  4693 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgatgt 4792  T
Q  100 catcggaagcaagatcatcagaagcatctcat 131  Q
    |||| |||||||| ||||||||||||||||||    
T  4793 catcagaagcaagttcatcagaagcatctcat 4824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 36523 - 36660
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    |||||||||||| |||||||||||||| ||  | ||||||||||||||| | |||||| ||||| | || ||||  ||| ||| |||| |||||||||||    
T  36523 tggaagaacaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagtgatcctaaagtatagtgctcctgaagtgatgacgtca 36622  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagca 139  Q
    || |||||||| |||| ||||||||||||| |||||||    
T  36623 tcagaagcaagttcattagaagcatctcatcagaagca 36660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 42482 - 42345
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 101  Q
    |||||||||||| |||||||||||||| ||  | ||||||||||||||| | |||||| ||||| | || ||||  ||| ||| |||| |||||||||||    
T  42482 tggaagaacaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagtgatcctaaagtatagtgctcctgaagtgatgacgtca 42383  T
Q  102 tcggaagcaagatcatcagaagcatctcattagaagca 139  Q
    || |||||||| |||| ||||||||||||| |||||||    
T  42382 tcagaagcaagttcattagaagcatctcatcagaagca 42345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 15446 - 15328
Alignment:
Q  5 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 104  Q
    ||||||||| |||||| | ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||||||||| ||  |||| |||||||||||||     
T  15446 aagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaagtgcttctgaagtgatgacgtcatca 15347  T
Q  105 gaagcaagatcatcagaag 123  Q
    |||||||||||| ||||||    
T  15346 gaagcaagatcaccagaag 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 12575 - 12437
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag--tcaagttctcttgaaatgatgacg 98  Q
    ||||||||||||| ||||| |||||||| ||||| ||||||||||||||| | |||| ||||||  | ||||||    |||| ||| |||  ||||||||    
T  12575 ctggaagaacaaaagagagtaatggaatcaacaaaaaggaagcttgaagcatttgaataaaagttctcctgaagataaaagtgctcctgagctgatgacg 12476  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaag 137  Q
    ||||| |||||||| |||||||||||||||||| |||||    
T  12475 tcatcagaagcaagttcatcagaagcatctcatcagaag 12437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 840 - 702
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagtt-ctcttgaaatgatgacgt 99  Q
    |||||| |||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| |  |||||||||  | ||| |||| |||||||||    
T  840 ctggaaaaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtcaaaatgctcatgaagtgatgacgt 741  T
Q  100 catcggaagcaagatcatcagaagcatctcattagaagc 138  Q
    |||| |||||||| | |||||||||||||||| ||||||    
T  740 catcagaagcaagtttatcagaagcatctcatcagaagc 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 27198 - 27316
Alignment:
Q  8 aacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtcatcgga 106  Q
    |||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| |||||||| | |||| ||| |||| ||||||| ||||| ||    
T  27198 aacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaaggcaaagtgctcctgaagtgatgacatcatcaga 27297  T
Q  107 agcaagatcatcagaagca 125  Q
    |||||| ||||||||||||    
T  27298 agcaagttcatcagaagca 27316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1251 - 1360
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||||| | |||||||||| |||||||||| ||||| ||| | || || ||| |||    
T  1251 ctggaagaacaaatgagagcaacataatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctgaagacaagtgctccttaagtgttgatgtc 1350  T
Q  101 atcggaagca 110  Q
    ||| ||||||    
T  1351 atcagaagca 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2068 - 1944
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| || ||||||| ||| || |||||| ||||| | |||||||| |||| ||| |||| |||||||||    
T  2068 ctggaagaacaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctcctgaagtcaaagtgctcatgaagtgatgacgt 1969  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||||||||||    
T  1968 catcagaagcaaggtcatcagaagc 1944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 32834 - 32712
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtca 101  Q
    |||||||||| ||||| || ||||| ||||| |||||||||| | |||| |||||||||||| |||||||| |  |||| ||| |||| |||||||||||    
T  32834 gaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaggcgtctgaagaaaagtgcttctgaagacaaaagtgctcctgaagtgatgacgtca 32735  T
Q  102 tcggaagcaagatcatcagaagc 124  Q
    || |||| ||| |||||||||||    
T  32734 tcagaagtaagttcatcagaagc 32712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49682 - 49638
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagctt 45  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  49682 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 49638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 89818 - 89941
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  89818 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgttcctgaagacaaagtgctcctgaagtggtgacgtc 89917  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
    ||| |||||||| |||||||||||    
T  89918 atcagaagcaagttcatcagaagc 89941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 556 - 681
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtcatcggaagcaagatcatcaga 121  Q
    ||||| ||||| |||||||||| ||| || |||||| ||||| | |||||| |||  || ||| |||| ||||||||||||  |||||||| ||||||||    
T  556 ggaatcaacaaaaaggaagcttaaagtgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcattagaagcaagttcatcaga 655  T
Q  122 agcatctcattagaagcaacatcacc 147  Q
    |||||||||| |||||||| ||||||    
T  656 agcatctcatcagaagcaagatcacc 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9883 - 9985
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||  | |||||| ||||| | |||||||  ||| ||| |||| ||||||||||    
T  9883 ctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagaatatgaagagaagtgctcctgaagtatagtgctcctgaagtgatgacgtc 9982  T
Q  101 atc 103  Q
    |||    
T  9983 atc 9985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 16131 - 16005
Alignment:
Q  14 tgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaa 111  Q
    ||||||| | ||||| ||||| ||||||||||||||| | |||||| | ||| | ||||||||  |||| ||| |||| ||||||| ||||| |||||||    
T  16131 tgagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagatgtgctcctgaagtcaaaagtgctcatgaagtgatgacatcatcagaagcaa 16032  T
Q  112 gatcatcagaagcatctcattagaagc 138  Q
    | ||||||||| |||||||| ||||||    
T  16031 gttcatcagaaccatctcatcagaagc 16005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 435 - 557
Alignment:
Q  2 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 100  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  435 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 534  T
Q  101 atcggaagcaagatcatcagaag 123  Q
    ||| |||||||| ||||||||||    
T  535 atcagaagcaagttcatcagaag 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 8261 - 8136
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| ||||| ||| |||||| | |||| |||||| ||||| | |||||| |  |||| ||| |||| ||||||||    
T  8261 ctggaagaacaaaagagagcaaaggaatcaacaaaaagtaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacg 8162  T
Q  99 tcatcggaagcaagatcatcagaagc 124  Q
    ||||| |||||||||| | |||||||    
T  8161 tcatcagaagcaagataaccagaagc 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 60380 - 60232
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| ||||| || ||||||| | |||| |||||| || || |  ||||| |||  || ||| |||  ||||||||    
T  60380 ctggaagaacaaaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtctgaagagaaatgctcttgaagacaaaagtgctcctgatgtgatgacg 60281  T
Q  99 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    ||||| || ||||| |||| ||||||||||||| |||||||| ||||||    
T  60280 tcatcagatgcaagttcattagaagcatctcataagaagcaagatcacc 60232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 151722 - 151783
Alignment:
Q  86 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||| ||||||    
T  151722 tgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatgagaagcaagatcacc 151783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 115816 - 115737
Alignment:
Q  69 ctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||||||| || ||| |||| |||||||||||||  ||||||| | |||||||||||||||| |||||||| ||||||    
T  115816 ctgaagtcaaagtgctcctgaagtgatgacgtcatcaaaagcaagtttatcagaagcatctcatcagaagcaagatcacc 115737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 15026 - 14902
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgt 99  Q
    ||||||||||||| |||||| | ||||| ||||| || ||||||| ||| || |||||| ||||| | || ||||| |||| ||| |||| ||| |||||    
T  15026 ctggaagaacaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctccttaagtcaaagtgctcatgaagtgacgacgt 14927  T
Q  100 catcggaagcaagatcatcagaagc 124  Q
    |||| |||||||| |||||||||||    
T  14926 catcagaagcaaggtcatcagaagc 14902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10233 - 10169
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 65  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||||| | |||| |||||||    
T  10233 ctggaagaacgaatgagagcaattgaatcaacaagaaggaagcttgaagcatctgaataaaagtg 10169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8192 - 8109
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaatta----acaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 80  Q
    |||||||||||||||||||||||||||| |    |||||||| ||||||||||| | |||||||||| |||||| ||| |||||    
T  8192 ctggaagaacaaatgagagcaatggaatcaacgtacaagaagtaagcttgaagcatctgaagaaaagaggttcttaagacaagt 8109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1995 - 1870
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| || || |||||||||| |||| | || ||| ||||| | |||||| |  || | ||| |||| ||||||||    
T  1995 ctggaagaacaaaagagagcaaaggaatcaataaaaaggaagcttaaagcatctgcagagaagtgctcctgaagactaaaatgctcctgaagtgatgacg 1896  T
Q  99 tcatcggaagcaagatcatcagaagc 124  Q
    ||||| |||||||||||| |||||||    
T  1895 tcatcagaagcaagatcaccagaagc 1870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 74928 - 74854
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| ||||||| |||||| ||||||||| ||| ||||||| | |||||||||||| | |||||||    
T  74928 ctggaagaacaaacgagagcagtggaatcaacaagaagaaaggttgaagcatctgaagaaaagtgctcctgaagt 74854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9123 - 9211
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaa 89  Q
    ||||||||||||| ||||||||  |||| ||||| ||||||||||||||||| |||||| ||||| | ||||||||| ||| ||||||||    
T  9123 ctggaagaacaaaagagagcaaatgaatcaacaa-aaggaagcttgaagcgtctgaagagaagtgatcctgaagtcacagtgctcttgaa 9211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 9252 - 9301
Alignment:
Q  98 gtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 147  Q
    |||||| |||| ||| |||||||||||||||||| |||||||| ||||||    
T  9252 gtcatcagaagaaagttcatcagaagcatctcatcagaagcaagatcacc 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 2510 - 2598
Alignment:
Q  38 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    ||||| || |||||| ||||||||| || ||||||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||    
T  2510 ggaagattaaagcgtctgaagaaaactgcttctgaagtctgaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 145226 - 145150
Alignment:
Q  4 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 80  Q
    ||||||||||||||| ||||| |||  ||||||| |||||||||||| | |||||||||| |||||| ||| |||||    
T  145226 gaagaacaaatgagaacaatgaaatctacaagaaagaagcttgaagcatctgaagaaaagaggttctaaagacaagt 145150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13976 - 13850
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 98  Q
    ||||||||||||| |||||||| ||||| ||| | |||||||||| | ||||  ||||| ||||| | |||||| |  |||| ||| |||| | |||| |    
T  13976 ctggaagaacaaaagagagcaaaggaatcaacgaaaaggaagcttaatgcgtcagaagagaagtgctcctgaagacaaaagtgctcctgaagtaatgatg 13877  T
Q  99 tcatcggaagcaagatcatcagaagca 125  Q
    ||||| |||||||| ||||||||||||    
T  13876 tcatcagaagcaagttcatcagaagca 13850  T

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Target: scaffold0324 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 10287 - 10228
Alignment:
Q  16 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||| ||||||| ||||| ||||||||||||||||| |||||||||||| | |||||||    
T  10287 agagctatggaataaacaaaaaggaagcttgaagcgtctgaagaaaagtgctcctgaagt 10228  T

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Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 5700 - 5823
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 100  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||| ||||||| | |||||||||||| |  |||||| |||| ||  | || | ||||||||    
T  5700 ctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcatctgaagaaaagtgctcatgaagtgaagtgcttctaaagtaatgacgtc 5799  T
Q  101 atcggaagcaagatcatcagaagc 124  Q
     || |||| ||| |||||||||||    
T  5800 ttcagaagtaagttcatcagaagc 5823  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 60654 - 60740
Alignment:
Q  24 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagca 110  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||| | |||||||  ||| ||| |||| ||| ||||||||| ||||||    
T  60654 ggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtttagtgctcctgaagtgaggacgtcatcagaagca 60740  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25738 - 25812
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 75  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||| || | |||| |||||| ||||| | |||||||    
T  25738 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagattaaggcgtctgaagagaagtgctcctgaagt 25812  T

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Target: scaffold0479 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 10250 - 10193
Alignment:
Q  68 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  10250 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 10193  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 13304 - 13417
Alignment:
Q  25 gaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 124  Q
    |||| ||||| || |||||||||||| | |||||| ||||| | ||||| |  ||| ||| |||| |||||| |||||   ||||| | |||||||||||    
T  13304 gaatcaacaaaaaagaagcttgaagcatctgaagagaagtgctcctgaaatttagtgctcctgaagtgatgatgtcattaaaagcatgttcatcagaagc 13403  T
Q  125 atctcattagaagc 138  Q
    ||||||| ||||||    
T  13404 atctcatcagaagc 13417  T

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Target: scaffold0251 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8054 - 7993
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    ||||||||||||  |||||||| ||||| ||||| ||| |||||| |||||| |||||||||    
T  8054 ctggaagaacaatagagagcaaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaa 7993  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19399 - 19338
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    ||||||||||||  |||||||| ||||| ||||| |||||||||| |||| | |||||||||    
T  19399 ctggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagaaaa 19338  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 143455 - 143394
Alignment:
Q  1 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 62  Q
    ||||||||||||  |||||||| ||||| || || |||||||||| |||||| |||||||||    
T  143455 ctggaagaacaatagagagcaaaggaatcaagaaaaaggaagcttaaagcgtctgaagaaaa 143394  T

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Target: scaffold0471 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 3606 - 3558
Alignment:
Q  77 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 125  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  3606 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 3558  T

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