View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3640_low_26 (Length: 351)

Name: NF3640_low_26
Description: NF3640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3640_low_26
NF3640_low_26
[»] chr4 (26 HSPs)
chr4 (22-351)||(25494213-25494534)
chr4 (114-193)||(1821072-1821150)
chr4 (22-115)||(9808033-9808128)
chr4 (114-189)||(47943965-47944039)
chr4 (22-113)||(6949444-6949537)
chr4 (116-193)||(17330961-17331037)
chr4 (116-193)||(49263613-49263689)
chr4 (114-189)||(45666848-45666922)
chr4 (114-193)||(54982157-54982235)
chr4 (119-193)||(6949563-6949636)
chr4 (31-117)||(49263490-49263578)
chr4 (114-193)||(9088746-9088824)
chr4 (28-75)||(9089164-9089211)
chr4 (114-193)||(19443047-19443125)
chr4 (114-192)||(34031469-34031547)
chr4 (142-193)||(37209545-37209596)
chr4 (142-193)||(49299321-49299372)
chr4 (28-111)||(49299437-49299522)
chr4 (114-193)||(9808160-9808236)
chr4 (22-115)||(38840007-38840102)
chr4 (22-70)||(54982315-54982363)
chr4 (29-115)||(45666729-45666815)
chr4 (118-188)||(46196526-46196595)
chr4 (142-192)||(46430403-46430453)
chr4 (31-87)||(33809356-33809412)
chr4 (26-115)||(53393790-53393880)
[»] chr6 (9 HSPs)
chr6 (22-115)||(8049772-8049867)
chr6 (22-108)||(8049669-8049757)
chr6 (29-115)||(2437336-2437424)
chr6 (114-193)||(8049902-8049980)
chr6 (114-196)||(14093208-14093288)
chr6 (29-115)||(14093321-14093409)
chr6 (28-112)||(23410952-23411038)
chr6 (28-115)||(25056986-25057074)
chr6 (161-193)||(9353714-9353746)
[»] chr3 (19 HSPs)
chr3 (22-115)||(45647008-45647103)
chr3 (114-193)||(16236991-16237069)
chr3 (36-114)||(2094196-2094276)
chr3 (22-115)||(45667849-45667944)
chr3 (114-193)||(2599600-2599678)
chr3 (116-193)||(27817983-27818059)
chr3 (28-109)||(2599478-2599561)
chr3 (22-115)||(16237102-16237197)
chr3 (114-194)||(45647135-45647214)
chr3 (114-193)||(37030369-37030448)
chr3 (115-193)||(34824239-34824316)
chr3 (114-193)||(34669220-34669299)
chr3 (114-193)||(296992-297070)
chr3 (22-113)||(5494035-5494129)
chr3 (154-193)||(27264379-27264418)
chr3 (114-188)||(5494162-5494235)
chr3 (28-70)||(21934081-21934123)
chr3 (119-192)||(2094315-2094389)
chr3 (114-194)||(9589302-9589381)
[»] scaffold1327 (1 HSPs)
scaffold1327 (27-115)||(1194-1284)
[»] chr5 (19 HSPs)
chr5 (114-193)||(1584242-1584320)
chr5 (7-69)||(32474502-32474564)
chr5 (114-193)||(39585353-39585431)
chr5 (28-115)||(8544240-8544329)
chr5 (118-193)||(6428631-6428705)
chr5 (114-193)||(17201878-17201956)
chr5 (114-194)||(19804302-19804381)
chr5 (22-114)||(19804174-19804268)
chr5 (29-115)||(42673581-42673669)
chr5 (114-170)||(25612737-25612792)
chr5 (22-114)||(12436247-12436341)
chr5 (22-115)||(1583925-1584019)
chr5 (118-192)||(1584059-1584132)
chr5 (114-192)||(32474714-32474791)
chr5 (114-193)||(28620589-28620665)
chr5 (114-193)||(8544129-8544207)
chr5 (114-188)||(19133037-19133110)
chr5 (29-112)||(32474594-32474678)
chr5 (31-116)||(39940230-39940317)
[»] chr7 (22 HSPs)
chr7 (22-116)||(2273346-2273440)
chr7 (22-115)||(41690200-41690295)
chr7 (114-193)||(16197393-16197471)
chr7 (114-193)||(2271339-2271417)
chr7 (28-115)||(10534534-10534623)
chr7 (142-194)||(28226885-28226937)
chr7 (39-115)||(4567815-4567893)
chr7 (22-110)||(16197266-16197356)
chr7 (29-108)||(39618114-39618193)
chr7 (31-115)||(8614632-8614717)
chr7 (114-189)||(12394794-12394868)
chr7 (35-113)||(35792619-35792699)
chr7 (116-193)||(37124723-37124799)
chr7 (28-115)||(2271450-2271537)
chr7 (114-193)||(1752052-1752130)
chr7 (114-193)||(4567925-4568003)
chr7 (142-193)||(10534424-10534475)
chr7 (28-115)||(12394645-12394735)
chr7 (55-115)||(37124627-37124689)
chr7 (28-115)||(28226736-28226825)
chr7 (114-186)||(39618233-39618304)
chr7 (29-102)||(43368971-43369046)
[»] chr2 (13 HSPs)
chr2 (22-115)||(16806135-16806230)
chr2 (22-115)||(16845416-16845511)
chr2 (114-193)||(29408330-29408408)
chr2 (114-194)||(1398022-1398101)
chr2 (116-193)||(16806035-16806111)
chr2 (116-193)||(16845316-16845392)
chr2 (22-115)||(4700776-4700870)
chr2 (55-112)||(29408442-29408501)
chr2 (114-193)||(45271840-45271916)
chr2 (24-70)||(149998-150044)
chr2 (28-115)||(11084317-11084406)
chr2 (114-183)||(3309418-3309486)
chr2 (22-75)||(45272951-45273004)
[»] chr1 (14 HSPs)
chr1 (114-193)||(6295192-6295270)
chr1 (23-115)||(10430195-10430289)
chr1 (114-193)||(41117530-41117608)
chr1 (22-115)||(41117402-41117497)
chr1 (114-193)||(36319441-36319519)
chr1 (29-115)||(45925834-45925922)
chr1 (28-116)||(13254257-13254347)
chr1 (114-194)||(11817493-11817572)
chr1 (114-193)||(1394898-1394976)
chr1 (29-87)||(6295333-6295391)
chr1 (29-87)||(52957639-52957697)
chr1 (22-75)||(43021312-43021365)
chr1 (129-193)||(13254147-13254210)
chr1 (153-193)||(19270257-19270297)
[»] chr8 (13 HSPs)
chr8 (23-115)||(27232091-27232185)
chr8 (26-108)||(11087583-11087667)
chr8 (22-115)||(38401953-38402047)
chr8 (39-115)||(7695005-7695083)
chr8 (114-193)||(32234231-32234309)
chr8 (114-193)||(38402079-38402155)
chr8 (29-115)||(34146692-34146780)
chr8 (142-193)||(1256236-1256287)
chr8 (118-193)||(5871387-5871461)
chr8 (29-113)||(32234112-32234198)
chr8 (28-70)||(5871261-5871303)
chr8 (149-193)||(27232250-27232294)
chr8 (28-84)||(34039300-34039356)
[»] scaffold1986 (1 HSPs)
scaffold1986 (28-115)||(564-653)
[»] scaffold0637 (1 HSPs)
scaffold0637 (22-116)||(3767-3863)
[»] scaffold0188 (1 HSPs)
scaffold0188 (26-115)||(5709-5800)
[»] scaffold0005 (1 HSPs)
scaffold0005 (28-115)||(257207-257295)


Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 22 - 351
Target Start/End: Original strand, 25494213 - 25494534
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacattaaatttattgaaaatataaagtgtgtgagggta 121  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25494213 aaataggaatttgttggagaaaaagataataaatgacaattgtttgttatgagatgaagataacattaaatttattgaaaatataaagtgtgtgagggta 25494312  T
Q  122 taatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaattagattgtactatttgcacaagttcaa 221  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||    
T  25494313 taataggaagacaatgtgc-aaaaatgcacatcgctaatttggtgttaattttctaaaaag--acttaaaaattagattgtactatttgtacaagttcaa 25494409  T
Q  222 attccaaccggttctgtttcaactaatcatgaattcaagttttgttttctttctattaaaaaatgttacattacattatgacatgtcaacttaattcttt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||     ||||||||||||||||||||||||||||||    
T  25494410 attccaaccggttctgtttcaactaatcatgaattcaagttttggtttctttctattgaaaaatg-----ttacattatgacatgtcaacttaattcttt 25494504  T
Q  322 ctcaagcaacataggcattaaccctttaat 351  Q
    ||||||||||||||||||||||||||||||    
T  25494505 ctcaagcaacataggcattaaccctttaat 25494534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 1821150 - 1821072
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||||||||||||||  |||||||||||||||||    
T  1821150 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaattttttaaaaagacacttaaaaa 1821072  T

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Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 9808033 - 9808128
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||||||||||||||||||||||| ||| |||| ||||||| ||||  ||||||||  ||||||||||||  ||| ||||||||||||    
T  9808033 aaataagaatttgttggagaaaaagataataactgataattgtttgttacgagagaaagataacatattaaatttattagaaagataaagtgtgtg 9808128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 47944039 - 47943965
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactta 189  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||||||||||||||  |||||||||||||    
T  47944039 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaattttttaaaaagacactta 47943965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 6949444 - 6949537
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtg 113  Q
    ||||||||||||||||||||||||||| ||||  ||||||| ||||||||||    ||||||||  ||||||||||||| ||| ||||||||||    
T  6949444 aaatatgaatttgttggagaaaaagattataaccgacaattgtttgttatgaacgaaagataacatattaaatttattggaaagataaagtgtg 6949537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 17330961 - 17331037
Alignment:
Q  116 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||| |||| |||||||||||| | ||||| |||| |||||||||||||||| |||||||||||| ||||    
T  17330961 agggtataataggaagaaaatgtgcaaaaa-tacacattgctattttggtgttaattttctaaaaagacacttcaaaa 17331037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 49263613 - 49263689
Alignment:
Q  116 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||| |||||| |||| |||||||||||| | ||| |||||| |||||||||||||||| |||||||||||||||||    
T  49263613 agggtctaataggaagaaaatgtgcaaaaa-tacacttcgctattttggtgttaattttctaaaaagacacttaaaaa 49263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 45666848 - 45666922
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactta 189  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||||||| ||||||  |||||||||||||    
T  45666848 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgtgaattttttaaaaagacactta 45666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 54982235 - 54982157
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||| |||||||||||| || ||||||||| | |||||| ||| |||| ||||||||||| |||||||||||||||||    
T  54982235 tgagggcataatagaaagaaaacgtgcaaaaa-tacacatcactattttgatgttaattttctaaaaagacacttaaaaa 54982157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 6949563 - 6949636
Alignment:
Q  119 gtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||| |||| ||||| |||||| | ||||||| ||||||||||||||||||| ||||| |||||||||||    
T  6949563 gtataataggaagaaaatgtacaaaaa-tacacatcgttaatttggtgttaattttctaaaaatacacttaaaaa 6949636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 49263490 - 49263578
Alignment:
Q  31 tttgttggagaaaaagataataaatgacaattat--ttgttatgagatgaagataacattaaatttattgaaaatataaagtgtgtgag 117  Q
    ||||||||||||||||||||||  | ||||||||  |||||| ||||  || |||||||||||||||||| ||| ||||| ||||||||    
T  49263490 tttgttggagaaaaagataatagctaacaattatatttgttacgagagaaaaataacattaaatttattggaaagataaaatgtgtgag 49263578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 9088824 - 9088746
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| ||||||| || ||| |||||||||| ||| |||||||| ||| ||||||| |||||||||    
T  9088824 tgagggtataataggaagaaaatgtgc-aagaatacacatcgctattttagtgttaatgttctaaaaagatacttaaaaa 9088746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 9089211 - 9089164
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgaga 75  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  9089211 gaatttgttggagaaaaagataataaccgacaattatttgttacgaga 9089164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 19443125 - 19443047
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| |||||||||||| |  |||||| ||  ||||| ||||||||| |||||||||||||||||    
T  19443125 tgagggtataataggaagaaaatgtgcaaaaa-tatacatcgttatcttggtattaattttctaaaaagacacttaaaaa 19443047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 34031547 - 34031469
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttc-caaaaagacacttaaaa 192  Q
    |||||||||||||| |||| |||||||| ||||| |||||| ||| |||||| |||||||||  ||||||||||||||||    
T  34031547 tgagggtataataggaagaaaatgtgca-aaaatacacatcactattttggtcttaattttctaaaaaagacacttaaaa 34031469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 37209596 - 37209545
Alignment:
Q  142 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||| |||||||||| ||||||| |||||||| |||||||||||||||||    
T  37209596 aaaaatacacatcgctattttggtggtaattttctaaaaagacacttaaaaa 37209545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 49299372 - 49299321
Alignment:
Q  142 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  49299372 aaaaatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaa 49299321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 49299522 - 49299437
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtg 111  Q
    ||||||||| || ||||||||||||| |||||||| ||||||| |||   ||||||||  ||||||||||||| ||| ||||||||    
T  49299522 gaatttgttagataaaaagataataactgacaattgtttgttacgagtgaaagataacatattaaatttattggaaaaataaagtg 49299437  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9808160 - 9808236
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||| |||||||| |||| ||||||  |||||| |||||||||| ||||||||||||||| | |||||||| |||||||    
T  9808160 tgaggatataataggaagaaaatgtg--aaaaatacacatcgctattttggtgttaatttt-ctaaaagacatttaaaaa 9808236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 38840102 - 38840007
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagata--acattaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| ||||||||| |||||||||||||||| ||||| || |||||||  |||  ||||||  | ||||||||||||| ||| |||| |||||||    
T  38840102 aaataggaatttgtttgagaaaaagataataactgacatttgtttgttacaagaaaaagataatatattaaatttattggaaagataaggtgtgtg 38840007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 54982363 - 54982315
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgtta 70  Q
    ||||| |||||||||||||||||||||||||| ||| |||| |||||||    
T  54982363 aaataggaatttgttggagaaaaagataataactgataattgtttgtta 54982315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 45666729 - 45666815
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataaca--ttaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||||||||| || | |||||| |||||||  |||   ||||||||  |||| ||||||||||| ||||||||||||    
T  45666729 aatttgttggagaaaaagataacaactaacaattgtttgttacaaga--gagataacatgttaattttattgaaaagataaagtgtgtg 45666815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 46196526 - 46196595
Alignment:
Q  118 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactt 188  Q
    |||||||||| |||| ||| |||||||| | ||| |||||| |||||||||||||||  ||||||||||||    
T  46196526 ggtataataggaagaaaatatgcaaaaa-tacacctcgctattttggtgttaattttataaaaagacactt 46196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 46430453 - 46430403
Alignment:
Q  142 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaa 192  Q
    |||||| ||||||| || |||||||||||||||  ||||||||||||||||    
T  46430453 aaaaatacacatcgttattttggtgttaattttttaaaaagacacttaaaa 46430403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 33809356 - 33809412
Alignment:
Q  31 tttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat 87  Q
    ||||||||||||||||||||||| | |||||| ||||||| || || || |||||||    
T  33809356 tttgttggagaaaaagataataactaacaattgtttgttacgatataaaaataacat 33809412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 53393790 - 53393880
Alignment:
Q  26 atgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |||  |||  || |||||  |||||| |||||||| | ||||||||||||    
T  53393790 atgaatttgttggag-aaaagataataactgacaattgtttattacaagaaaaatataacatattaaaattattgaatagataaagtgtgtg 53393880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 8049772 - 8049867
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||||  ||||||||  ||||||||||||| ||||||||||||||||    
T  8049772 aaatatgaatttgatggagaaaaagataataagtaacaattgtttgttatgagagaaagataacatattaaatttattggaaatataaagtgtgtg 8049867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 8049669 - 8049757
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaa 108  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||||||||  ||||||||  ||||||||||||| |||||||||    
T  8049669 aaatatgaatttgttggagaaaaagataataagcaacaattgtttgttatgagagaaagataacatattaaatttattggaaatataaa 8049757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 2437424 - 2437336
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||| ||||||||||||||| |||||||  ||||||||||||   |||||||  ||||||||||||| ||| ||||||||||||    
T  2437424 aatttgttgaagaaaaagataataattgacaatagtttgttatgagagatagataacatattaaatttattggaaagataaagtgtgtg 2437336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 8049902 - 8049980
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| ||||||||||||   |||||||||| |||||||||||||||  |||||||||| ||||||    
T  8049902 tgagggtataataggaagaaaatgtgcaaaaaca-cacatcgctattttggtgttaattttttaaaaagacacataaaaa 8049980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 14093288 - 14093208
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaatta 196  Q
    |||||||||||||| |||| |||||||| ||||| ||||| |||||||||||||||| ||| | |||||| ||||||||||||    
T  14093288 tgagggtataataggaagaaaatgtgca-aaaatacacattgctaatttggtgttaacttt-ctaaaagatacttaaaaatta 14093208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 14093409 - 14093321
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||| |||||||||||||||  ||||||| ||||||| ||||  ||||| ||  ||||||||||||| ||  ||||||||||||    
T  14093409 aatttgttgtagaaaaagataataaccgacaattgtttgttacgagagaaagatgacatattaaatttattggaaggataaagtgtgtg 14093321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 23410952 - 23411038
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgt 112  Q
    |||||||||||||||||||||| ||| | | || ||||||||| ||||  ||||||||  ||||||||||||| ||| | |||||||    
T  23410952 gaatttgttggagaaaaagatagtaactaagaaatatttgttacgagagaaagataacatattaaatttattggaaagagaaagtgt 23411038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 25056986 - 25057074
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataaca--ttaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||| |||||||| |||||||   |||| | ||||||||||||  |||||||||  |||||||||||| ||| ||||||||||||    
T  25056986 gaatttgttagagaaaaatataataacc-acaactgtttgttatgagagaaagataacacattaaatttattggaaagataaagtgtgtg 25057074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 9353714 - 9353746
Alignment:
Q  161 ttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||| |||||||||||||||||    
T  9353714 ttggtgttaattttctaaaaagacacttaaaaa 9353746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 9e-24; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 45647008 - 45647103
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||  ||||||||  ||||||||||||| ||| ||||||||||||    
T  45647008 aaataggaatttgttggagaaaaagataataagtgacaattgtttgttatgagagaaagataacatattaaatttattggaaagataaagtgtgtg 45647103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 16237069 - 16236991
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  16237069 tgagggtataataggaagaaaatgtg-aaaaaatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaa 16236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 2094196 - 2094276
Alignment:
Q  36 tggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgt 114  Q
    |||||||||||||||||| |||||||||||||||| ||||  ||||||||  ||||||||| ||||||| |||||||||||    
T  2094196 tggagaaaaagataataactgacaattatttgttacgagagaaagataacatattaaattttttgaaaagataaagtgtgt 2094276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 45667849 - 45667944
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||||||||||||||| ||||||| |||||||| ||||||| |  |  ||||||||  ||||||||||||||||| ||||||||||||    
T  45667849 aaataggaatttgttggagaaaaatataataactgacaattgtttgttacggaagaaagataacatattaaatttattgaaaagataaagtgtgtg 45667944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 2599600 - 2599678
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| || | |||||||||||| | |||||||||| ||| |||||||||||| |||||||||||||||||    
T  2599600 tgagggtataataggaataaaatgtgcaaaaa-tacacatcgctattttagtgttaattttctaaaaagacacttaaaaa 2599678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 27817983 - 27818059
Alignment:
Q  116 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||| || | ||||||||||| |||||||||| || ||| |||||||||||| ||||| |||||||||||    
T  27817983 agggtataataggaataaaatgtgcaaaa-atgcacatcgttatttttgtgttaattttctaaaaaaacacttaaaaa 27818059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 2599478 - 2599561
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaag 109  Q
    ||||||||||| |||||||||||||| |||||||  ||||||| ||||  ||||||||  ||||||||||||| ||| ||||||    
T  2599478 gaatttgttggtgaaaaagataataactgacaatggtttgttacgagagaaagataacatattaaatttattggaaagataaag 2599561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 16237197 - 16237102
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataaca--ttaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||| |||| ||||||||||||||| ||||| || ||||||| ||||  || ||||||  |||||||||||| | | ||||||||||||    
T  16237197 aaatatgaattggttgaagaaaaagataataactgacagttgtttgttacgagagaaaaataacattttaaatttattggagagataaagtgtgtg 16237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 45647135 - 45647214
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 194  Q
    |||||||||||||| |||| ||||||||| || | |||||||||| |||  ||||||||||| ||||| ||||||||||||    
T  45647135 tgagggtataataggaagaaaatgtgcaagaa-tacacatcgctatttttatgttaattttctaaaaaaacacttaaaaat 45647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 37030448 - 37030369
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||| ||| |||| |||||||||||||| ||| |||  | ||| |||||||||||| ||||| |||||||||||    
T  37030448 tgagggtatactaggaagaaaatgtgcaaaaaatacacttcgtgatttttgtgttaattttctaaaaaaacacttaaaaa 37030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 34824239 - 34824316
Alignment:
Q  115 gagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||| ||||||||| |||||||||||| | ||| || |||||||||||| ||| ||| |||| ||||||||||||    
T  34824239 gagggtatgatagaaagaaaatgtgcaaaaa-tacacttcactaatttggtgtgaatattctaaaacgacacttaaaaa 34824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 34669220 - 34669299
Alignment:
Q  114 tgagggtataatagaaagacaa-tgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||| |||||||||||| | || |||||||||| | |||||||||| |||  ||||||||||||||||| |||||||||||    
T  34669220 tgagagtataatagaaaaaaaaatgtgcaaaaa-tacacatcgctattttaatgttaattttccaaaaaaacacttaaaaa 34669299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 296992 - 297070
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||| ||| |||| ||||| |||||| | ||| |||||| |||||||||||| ||| |||| ||||||||||||    
T  296992 tgagggtatagtaggaagaaaatgtacaaaaa-tacacttcgctattttggtgttaatattctaaaacgacacttaaaaa 297070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 5494035 - 5494129
Alignment:
Q  22 aaatatgaatttgttggag-aaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtg 113  Q
    ||||| |||||| |||||| ||||| ||||||| |||||||| ||||||| ||||  ||||||||  ||||||||||||  ||| ||||||||||    
T  5494035 aaataggaatttattggagaaaaaaaataataagtgacaattgtttgttacgagaaaaagataacatattaaatttattataaagataaagtgtg 5494129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 27264379 - 27264418
Alignment:
Q  154 cgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  27264379 cgctaatttggtgttaattttttaaaaagacacttaaaaa 27264418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 5494162 - 5494235
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactt 188  Q
    ||||| |||||||| |||| |||||||||||| | |||||| ||| ||| || ||||||||| ||||||||||||    
T  5494162 tgaggatataataggaagaaaatgtgcaaaaa-tacacatcactatttttgtattaattttctaaaaagacactt 5494235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 21934123 - 21934081
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgtta 70  Q
    |||||||||||||||||||||||||| | |||| |||||||||    
T  21934123 gaatttgttggagaaaaagataataagtaacaaatatttgtta 21934081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 2094315 - 2094389
Alignment:
Q  119 gtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaa--ttttccaaaaagacacttaaaa 192  Q
    ||||||||| |||| |||||||||||| | |||||| ||| |||||||||||  ||||  ||||||||||||||||    
T  2094315 gtataataggaagaaaatgtgcaaaaa-tacacatcactattttggtgttaatttttttaaaaaagacacttaaaa 2094389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 9589302 - 9589381
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 194  Q
    |||||||| ||||| |||| || ||||||||| | ||| | |||| |||||||||||| ||| |||| |||||||||||||    
T  9589302 tgagggtacaataggaagaaaaagtgcaaaaa-tacactttgctattttggtgttaatattctaaaatgacacttaaaaat 9589381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 1194 - 1284
Alignment:
Q  27 tgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||  ||||||||  ||||||||||||||||| ||||||||||||    
T  1194 tgaatttgttggagaaaaagataataagtgacaattgtttgttaagagagaaagataacatattaaatttattgaaaagataaagtgtgtg 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 1584242 - 1584320
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||  |||||||||||||||||    
T  1584242 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcgctaatttggtgttaattttttaaaaagacacttaaaaa 1584320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 32474502 - 32474564
Alignment:
Q  7 gagatgaagagggagaaatatgaatttgttggagaaaaagataataaatgacaattatttgtt 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  32474502 gagatgaagagggagaaatatgaatttgttggagaaaaagataataagtgacaattgtttgtt 32474564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 39585431 - 39585353
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| |||||||||||| | ||| |||||| |||||||||||||||| |||||||||||||||||    
T  39585431 tgagggtataataggaagaaaatgtgcaaaaa-tacacgtcgctattttggtgttaattttctaaaaagacacttaaaaa 39585353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 8544329 - 8544240
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| ||||  ||||||||  ||||||||||||| |||||||| |||||||    
T  8544329 gaatttgttggagaaaaagataataattgacaattgtttcttacgagagaaagataacatattaaatttattggaaatataaggtgtgtg 8544240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 6428631 - 6428705
Alignment:
Q  118 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||| |||||||||||| | |||||| ||| ||||||||||||||||  ||||||||||||||||    
T  6428631 ggtataatagaaagaaaatgtgcaaaaa-tacacatcactattttggtgttaattttcttaaaagacacttaaaaa 6428705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 17201956 - 17201878
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| |||||||||||| | |||||||||| |||  ||||||||||| |||||||||||||||||    
T  17201956 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctatttttatgttaattttctaaaaagacacttaaaaa 17201878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 19804302 - 19804381
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 194  Q
    |||||||| ||||| |||| ||||| |||||| | ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  19804302 tgagggtagaataggaagaaaatgtacaaaaa-tacacattgctaatttagtgttaattttctaaaaagacacttaaaaat 19804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 19804174 - 19804268
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgt 114  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||||||  |||  || |||||  ||||||||| ||| ||| |||||||||||    
T  19804174 aaataggaatttgttggagaaaaagataatagctgacaattatttgttaccagagaaatataacatattaaatttgttggaaagataaagtgtgt 19804268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 42673669 - 42673581
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||  || |||||  ||||||||||||  ||  ||||||||||||    
T  42673669 aatttgttagagaaaaagataataaccgacaattatttgttatgagagaaatataacatattaaatttattagaatgataaagtgtgtg 42673581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 25612792 - 25612737
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaa 170  Q
    |||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||    
T  25612792 tgagggtataataggaagaaaatgtgcaaaaa-tacacatcgctaatttggtgttaa 25612737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 12436341 - 12436247
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgt 114  Q
    ||||| |||||||||| |||||||||||||||  ||||||  |||||||  |||  ||||||||  ||||||| ||||||||| |||||||||||    
T  12436341 aaataggaatttgttgaagaaaaagataataaccgacaatagtttgttaccagagaaagataacatattaaatatattgaaaaaataaagtgtgt 12436247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 1583925 - 1584019
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac-attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||  || | ||| || |||||||||  ||| ||||||||||||    
T  1583925 aaataggaatttattggagaaaaagataataacggacaattgtttgttatgagagaaatacaactatgaaatttattagaaagataaagtgtgtg 1584019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 1584059 - 1584132
Alignment:
Q  118 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaa 192  Q
    |||||||||| |||| |||||||||||| | ||||||||||||||| |||| |||||  ||||||| ||||||||    
T  1584059 ggtataataggaagaaaatgtgcaaaaa-tacacatcgctaatttgatgtttattttttaaaaagatacttaaaa 1584132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 32474714 - 32474791
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaa 192  Q
    ||||||||||||||||||| ||||||| |||||| || ||||||| |||| || ||||||||  |||||| ||||||||    
T  32474714 tgagggtataatagaaagaaaatgtgc-aaaaatacaaatcgctattttgatggtaattttcttaaaagatacttaaaa 32474791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 28620589 - 28620665
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| || ||||||||| | ||||||| || ||  |||||||||||| |||||||||||||||||    
T  28620589 tgagggtataataggaagaaaaggtgcaaaaa-tacacatcgttattt--gtgttaattttctaaaaagacacttaaaaa 28620665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 8544207 - 8544129
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||  |||| |||||||||||| | ||||| | ||||||||||||||||||   ||||| ||||||||||    
T  8544207 tgagggtataatatgaagaaaatgtgcaaaaa-tacacattgttaatttggtgttaattttttgaaaaggcacttaaaaa 8544129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 19133110 - 19133037
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactt 188  Q
    ||||||||||||||||||| ||||||  ||| || ||| |||||||||| ||| |||| |||||||| |||||||    
T  19133110 tgagggtataatagaaagaaaatgtg-taaatatacacttcgctaatttcgtgctaatattccaaaatgacactt 19133037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 32474594 - 32474678
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgt 112  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||| || |  ||||||||  ||||||||||||| ||| |||||||||    
T  32474594 aatttgttgaagaaaaagataataactgacaattgtttattacgata-aaagataacatattaaatttattggaaagataaagtgt 32474678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 39940317 - 39940230
Alignment:
Q  31 tttgttggagaaaaagataataaatgacaattatttgttatgagatgaagat--aacattaaatttattgaaaatataaagtgtgtga 116  Q
    |||||||||||||||| ||||||  ||||||  ||||||||||||  || ||  || ||||||||||||| ||| || ||||||||||    
T  39940317 tttgttggagaaaaagttaataacggacaatagtttgttatgagagaaaaataaaatattaaatttattggaaagatcaagtgtgtga 39940230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 2273440 - 2273346
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacattaaatttattgaaaatataaagtgtgtga 116  Q
    ||||| |||||||||| ||||||||||||||| | |||||| ||||||| ||||  ||||||||||||||||||||||||| | |||||||||||    
T  2273440 aaataagaatttgttgaagaaaaagataataactaacaattgtttgttacgagagaaagataacattaaatttattgaaaagagaaagtgtgtga 2273346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 41690200 - 41690295
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||| || |||||  ||||||||||||| ||||||||||| ||||    
T  41690200 aaataggaatttgttggagaaaaagataataattgacaattgtttgttacgagataaatataacatattaaatttattggaaatataaagtttgtg 41690295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 16197393 - 16197471
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| |||||||||||| | |||||| ||| |||||||||||||||| |||||||||||||||||    
T  16197393 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcactattttggtgttaattttctaaaaagacacttaaaaa 16197471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 2271417 - 2271339
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||| |||||||| |||| |||||||||||| | |||||||||| |||||||||||||| | |||||||||||||||||    
T  2271417 tgaggatataataggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaatttcctaaaaagacacttaaaaa 2271339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 10534623 - 10534534
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||||||||||||||  ||||||| ||||||| || || ||||||||  |||||||||||| |||| ||||| ||||||    
T  10534623 gaatttgttggagaaaaagataataacagacaattgtttgttacgacataaagataacatattaaatttattaaaaaaataaaatgtgtg 10534534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 28226885 - 28226937
Alignment:
Q  142 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 194  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  28226885 aaaaatacacatcgctaatttggtgttaatattccaaaacgacacttaaaaat 28226937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 4567815 - 4567893
Alignment:
Q  39 agaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||| |||||||| ||||||||||||  || |||||  ||||||||||||| ||| ||||||||||||    
T  4567815 agaaaaagataataattgacaattgtttgttatgagagaaatataacatattaaatttattggaaagataaagtgtgtg 4567893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 16197266 - 16197356
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagt 110  Q
    ||||| |||||||||||| ||||||||||||| |||||||| |||||||  |||  ||||||||  ||||||||||||| ||| |||||||    
T  16197266 aaataggaatttgttggaaaaaaagataataactgacaattgtttgttacaagagaaagataacatattaaatttattggaaagataaagt 16197356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 39618114 - 39618193
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacattaaatttattgaaaatataaa 108  Q
    ||||||||| ||||||| ||||||| || ||||| ||||||||||||  || |||||||||||||||||| ||| |||||    
T  39618114 aatttgttgaagaaaaatataataactggcaattgtttgttatgagagaaaaataacattaaatttattggaaagataaa 39618193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 8614717 - 8614632
Alignment:
Q  31 tttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat-taaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||  ||||||| || | ||||||||  ||| ||||||||||||    
T  8614717 tttgttggagaaaaagataataactgacaattgtttgttacgagagaaagataatatattaatttattagaaagataaagtgtgtg 8614632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 12394794 - 12394868
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacactta 189  Q
    |||| ||||||||| |||| ||||||||||| |||||||||  || ||||||||| |||||| |||||||||||||    
T  12394794 tgagagtataataggaagaaaatgtgcaaaa-atgcacatcattattttggtgttcattttctaaaaagacactta 12394868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 35792699 - 35792619
Alignment:
Q  35 ttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtg 113  Q
    ||||||||||||||||||| | |||||| ||||||| ||||  ||||||||  ||||||||||||  ||| ||||||||||    
T  35792699 ttggagaaaaagataataagttacaattgtttgttacgagagaaagataacatattaaatttattagaaagataaagtgtg 35792619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 37124723 - 37124799
Alignment:
Q  116 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||| |||| ||||||||||||   ||||| |||| |||| || |||||||| |||||||||||||||||    
T  37124723 agggtataataggaagaaaatgtgcaaaaaca-cacattgctattttgatgctaattttctaaaaagacacttaaaaa 37124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 2271537 - 2271450
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat-taaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||| ||||||||| |||||||| ||||||| |||| ||| ||||||| | || |||||| ||| |||||| |||||    
T  2271537 gaatttgttggagaaagagataataactgacaattgtttgttacgaga-gaaaataacatattaaattattggaaagataaagggtgtg 2271450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 1752130 - 1752052
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||  ||| ||||||||| | ||||||||  |||||||||||    
T  1752130 tgagggtataatagaaagaaaatgtg-aaaaaatacacttccttaaattggtgttattattccaaaacaacacttaaaaa 1752052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 4567925 - 4568003
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| || ||| ||||| | |||  ||||| |||| ||||||||||| ||||||||| |||||||    
T  4567925 tgagggtataatagaaagataacgtgtaaaaa-tacactgcgctattttgatgttaattttctaaaaagacatttaaaaa 4568003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 10534475 - 10534424
Alignment:
Q  142 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||| ||||||| || |||||||||||||||| ||||||||| |||||||    
T  10534475 aaaaatacacatcgttattttggtgttaattttctaaaaagacatttaaaaa 10534424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 12394645 - 12394735
Alignment:
Q  28 gaatttgttggagaaaa-agataataaatgacaattatttgttatgagatgaagataaca--ttaaatttattgaaaatataaagtgtgtg 115  Q
    |||||| |||||||||| ||||||||| |||||||| ||||||| ||||  |||||||||  |||||||||||| |||  |||| ||||||    
T  12394645 gaatttattggagaaaaaagataataactgacaattgtttgttaagagagaaagataacatgttaaatttattggaaagctaaaatgtgtg 12394735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 37124627 - 37124689
Alignment:
Q  55 tgacaattatttgttatgagatgaagataacat--taaatttattgaaaatataaagtgtgtg 115  Q
    |||||||| ||||||||||||  ||||||||||  ||||||||||| ||| ||||||||||||    
T  37124627 tgacaattgtttgttatgagagaaagataacatattaaatttattggaaagataaagtgtgtg 37124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 28226736 - 28226825
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||||||||| ||| | |||||| ||||||| || |  ||||||||  ||||||||||||| ||| ||| | ||||||    
T  28226736 gaatttgttggagaaaaagatattaactaacaattgtttgttacgatagaaagataacatattaaatttattggaaagatataatgtgtg 28226825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 39618233 - 39618304
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacac 186  Q
    |||||||||||||| |||| ||||||| |||||| ||||||  || |||  ||||||||||| ||||||||||    
T  39618233 tgagggtataataggaagaaaatgtgc-aaaaatacacatctatatttttatgttaattttctaaaaagacac 39618304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 43368971 - 43369046
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaa 102  Q
    ||||||||||||||||| ||||||| | ||||||  |||||| ||||  || |||||  |||||||||||||||||    
T  43368971 aatttgttggagaaaaaaataataactaacaattgcttgttacgagagaaaaataacatattaaatttattgaaaa 43369046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 16806230 - 16806135
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||  ||||||||  ||||||||||||| ||| ||||||||||||    
T  16806230 aaatatgaatttgttagagaaaaagataataactgacaattgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtg 16806135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 16845511 - 16845416
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||  ||||||||  ||||||||||||| ||| ||||||||||||    
T  16845511 aaatatgaatttgttagagaaaaagataataactgacaattgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtg 16845416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 29408408 - 29408330
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| |||||||||||| | ||||||| || |||||||||||||||| ||||| ||| |||||||    
T  29408408 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcgttattttggtgttaattttctaaaaaaacatttaaaaa 29408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 1398022 - 1398101
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 194  Q
    |||||||||||| | |||| |||||||||||| | |||||||||| |||||||||||||||| ||||| ||||||| ||||    
T  1398022 tgagggtataattggaagaaaatgtgcaaaaa-tacacatcgctattttggtgttaattttctaaaaaaacacttacaaat 1398101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 16806111 - 16806035
Alignment:
Q  116 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||| |||| || ||||||||| | |||||| ||| |||||| ||||||||| |||||||||||||||||    
T  16806111 agggtataataggaagaaaacgtgcaaaaa-tacacatcactattttggttttaattttctaaaaagacacttaaaaa 16806035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 16845392 - 16845316
Alignment:
Q  116 agggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||| |||| || ||||||||| | |||||| ||| |||||| ||||||||| |||||||||||||||||    
T  16845392 agggtataataggaagaaaacgtgcaaaaa-tacacatcactattttggttttaattttctaaaaagacacttaaaaa 16845316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 4700870 - 4700776
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat-taaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||||||||||||||||||| ||| | |||||||||||||| || |  |||||||||| | || |||||| ||| | ||||||||||    
T  4700870 aaataagaatttgttggagaaaaagatactaactaacaattatttgttacgaaagaaagataacatattaaattattgtaaagagaaagtgtgtg 4700776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 29408501 - 29408442
Alignment:
Q  55 tgacaattatttgttatgagatgaagataacat--taaatttattgaaaatataaagtgt 112  Q
    |||||||| ||||||||||||  ||||||||||  ||||||||||||||| |||||||||    
T  29408501 tgacaattgtttgttatgagagaaagataacatattaaatttattgaaaagataaagtgt 29408442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 45271916 - 45271840
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| ||||| |||||||| |||||| ||||||| ||||| |||||| ||||  |||||||||||    
T  45271916 tgagggtataataggaagaaaatgtacaaaaaatacacatcactaatttagtgtt-attttctaaaa--acacttaaaaa 45271840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 150044 - 149998
Alignment:
Q  24 atatgaatttgttggagaaaaagataataaatgacaattatttgtta 70  Q
    ||||||||||||||||| |||||||||||| | |||||| |||||||    
T  150044 atatgaatttgttggagtaaaagataataactaacaattgtttgtta 149998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 11084317 - 11084406
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||||| ||| ||| | |||| | ||||||| ||||  ||||||||  ||||||||||||| ||| | ||||||||||    
T  11084317 gaatttgttggagaaaaaaatattaattaacaaatgtttgttacgagagaaagataacatattaaatttattggaaagagaaagtgtgtg 11084406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 3309486 - 3309418
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaaga 183  Q
    |||||||||||||| |||| |||||||| ||||| ||||||| |  |||| ||||||||||| |||||||    
T  3309486 tgagggtataataggaagaaaatgtgca-aaaatacacatcgttgttttgatgttaattttctaaaaaga 3309418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 45273004 - 45272951
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgaga 75  Q
    ||||| ||||||| |||||||||||||||||| ||||||||  |||||| ||||    
T  45273004 aaataggaatttgatggagaaaaagataataactgacaattgcttgttacgaga 45272951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 6295270 - 6295192
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| ||| |||||||||||| ||||||||| |||||||    
T  6295270 tgagggtataatagaaagaaaatgtgcaaaaa-tacacatcgctattttagtgttaattttctaaaaagacatttaaaaa 6295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 10430289 - 10430195
Alignment:
Q  23 aatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||| ||||| |||||||||||||||| ||| | |||||||||||||||||||  ||||||||  ||||||||||||| ||| | ||||||||||    
T  10430289 aataagaattggttggagaaaaagatagtaactaacaattatttgttatgagagaaagataacgtattaaatttattggaaagaaaaagtgtgtg 10430195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 41117530 - 41117608
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||| | ||  |||||||| | |||||||||| |||||||||||||||| |||||||||||||||||    
T  41117530 tgagggtataatagaaaaaaaaaatgcaaaaa-tacacatcgctagtttggtgttaattttctaaaaagacacttaaaaa 41117608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 41117402 - 41117497
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||||||||| ||||||||||||||| ||||  || ||||||| ||||  ||||||||  ||||||||||||| ||| ||||||||||||    
T  41117402 aaataggaatttgttgaagaaaaagataataagtgacgtttgtttgttacgagagaaagataacatattaaatttattggaaagataaagtgtgtg 41117497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 36319519 - 36319441
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||| ||||||||| |||| |||||||||||| | |||||||||| ||| |||||||||||| ||||||| |||||||||    
T  36319519 tgagagtataataggaagaaaatgtgcaaaaa-tacacatcgctatttttgtgttaattttctaaaaagatacttaaaaa 36319441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 45925834 - 45925922
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||| |||||||||||||||||||| | |||| | ||||||| ||||  ||||||||  ||||||||||||||||| | ||||||||||    
T  45925834 aattggttggagaaaaagataataactaacaaatgtttgttaggagagaaagataacatattaaatttattgaaaagagaaagtgtgtg 45925922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 13254347 - 13254257
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtga 116  Q
    |||||| |||||||||||||||| || |||||||| ||||||| ||||  || |||||  ||||||||||||| ||| ||| |||||||||    
T  13254347 gaattttttggagaaaaagataaaaactgacaattgtttgttacgagagaaaaataacatattaaatttattggaaagatatagtgtgtga 13254257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 11817572 - 11817493
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaat 194  Q
    |||||||||||||| || | ||| |||||||| | | ||| ||||||||||||||||||||  ||||||| ||||||||||    
T  11817572 tgagggtataataggaaaaaaatctgcaaaaa-tacgcattgctaatttggtgttaattttttaaaaagaaacttaaaaat 11817493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 1394898 - 1394976
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||| ||||||||| |||||| ||||||| ||| || |||||||| ||| ||| ||| |||| ||||||||||||    
T  1394898 tgagggtatgatagaaagaaaatgtg-aaaaaatacacttcactaatttgatgtgaatattctaaaacgacacttaaaaa 1394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 6295391 - 6295333
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat 87  Q
    ||||||||||||||||| |||||||  ||||||| ||||||| ||||  ||||||||||    
T  6295391 aatttgttggagaaaaaaataataaccgacaattgtttgttacgagagaaagataacat 6295333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 52957639 - 52957697
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat 87  Q
    ||||||||||||||||||||| ||| | |||| | |||||||  |||||||||||||||    
T  52957639 aatttgttggagaaaaagatattaactaacaaatgtttgttacaagatgaagataacat 52957697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 43021312 - 43021365
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgaga 75  Q
    ||||| |||||||||||||||||||||| ||| | |||||| ||| ||||||||    
T  43021312 aaataggaatttgttggagaaaaagatattaactaacaattgtttattatgaga 43021365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 13254210 - 13254147
Alignment:
Q  129 aagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||| |||||||||||| | |||||||||| |||| ||||||||||| ||||| || ||||||||    
T  13254210 aagaaaatgtgcaaaaa-tacacatcgctattttgatgttaattttctaaaaaaacgcttaaaaa 13254147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 19270257 - 19270297
Alignment:
Q  153 tcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| || ||||| ||||||||||||    
T  19270257 tcgctaatttggtgttaatatttcaaaacgacacttaaaaa 19270297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 27232091 - 27232185
Alignment:
Q  23 aatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||| ||||  ||||||||  ||||||||||||  ||| ||||| ||||||    
T  27232091 aataagaatttgttggagaaaaagataataactgacaattgtttgttacgagagaaagataacatattaaatttatttgaaagataaaatgtgtg 27232185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 11087583 - 11087667
Alignment:
Q  26 atgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataaca--ttaaatttattgaaaatataaa 108  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||| |||  |||||||||  ||||||||||| |||| |||||    
T  11087583 atgaatttgttggagaaaaagatagtaactgacaattgtttgttataagagaaagataacatgttaaatttattaaaaagataaa 11087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 38401953 - 38402047
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||| ||||||||||||||||||||||| || ||||||| ||||||||||||  | ||||||  ||||| ||||||| ||| ||||||||||||    
T  38401953 aaatataaatttgttggagaaaaagataat-aacgacaattgtttgttatgagagaatgataacatattaagtttattggaaagataaagtgtgtg 38402047  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 7695083 - 7695005
Alignment:
Q  39 agaaaaagataataaatgacaattatttgttatgagatgaagataacat--taaatttattgaaaatataaagtgtgtg 115  Q
    |||||||| |||||| |||||||| |||||||  |||  ||||||||||  ||||||||||||||| ||||||||||||    
T  7695083 agaaaaaggtaataactgacaattgtttgttacaagagaaagataacatattaaatttattgaaaagataaagtgtgtg 7695005  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 32234231 - 32234309
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||||||| |||| ||||| |||||| | |||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  32234231 tgagggtataataggaagaaaatgtacaaaaa-tacacatcgctattttgatgtaaattttctaaaaaaacacttaaaaa 32234309  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 38402079 - 38402155
Alignment:
Q  114 tgagggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||||| ||||||| |||||| ||||| |||| |||| |||||| |||| |||||||||||||||||    
T  38402079 tgagggtataatagaaaga-aatgtgc-aaaaatacacattgctattttgatgttaa-tttctaaaaagacacttaaaaa 38402155  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 34146692 - 34146780
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||||||||||||  ||||||| ||||||  || |  ||||||||  ||||||||||||| ||| ||||| ||||||    
T  34146692 aatttgttggagaaaaagataataacagacaattgtttgttgcgaaagaaagataacatattaaatttattggaaagataaaatgtgtg 34146780  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 1256287 - 1256236
Alignment:
Q  142 aaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||| ||||  ||||||| ||||||||||||| |||||||||||||||||    
T  1256287 aaaaatacacaatgctaattcggtgttaattttctaaaaagacacttaaaaa 1256236  T

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Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 5871387 - 5871461
Alignment:
Q  118 ggtataatagaaagacaatgtgcaaaaaatgcacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    |||||||||| |||| |||||| ||||| |  |||||||||||||| | ||||||||  |||||||||||||||||    
T  5871387 ggtataataggaagaaaatgtgtaaaaa-tatacatcgctaatttgatattaattttttaaaaagacacttaaaaa 5871461  T

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Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 32234112 - 32234198
Alignment:
Q  29 aatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtg 113  Q
    |||||||| ||||||||||||| || | |||||| ||||||| ||||  || |||||  |||||||||||| |||| ||||||||||    
T  32234112 aatttgttagagaaaaagataaaaactaacaattgtttgttacgagagaaaaataacatattaaatttattaaaaaaataaagtgtg 32234198  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 5871261 - 5871303
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgtta 70  Q
    |||||||||||||||||| ||||||| |||||||| |||||||    
T  5871261 gaatttgttggagaaaaaaataataattgacaattgtttgtta 5871303  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 27232250 - 27232294
Alignment:
Q  149 cacatcgctaatttggtgttaattttccaaaaagacacttaaaaa 193  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||||    
T  27232250 cacatcgctaatttgggtttaattttctaaaaaaacacttaaaaa 27232294  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 34039300 - 34039356
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataa 84  Q
    |||||||||||||||||| ||| ||| | |||| ||||||||||||||  |||||||    
T  34039300 gaatttgttggagaaaaatatagtaactaacaaatatttgttatgagagaaagataa 34039356  T

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Target: scaffold1986 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 564 - 653
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat--taaatttattgaaaatataaagtgtgtg 115  Q
    ||||||||||||||||||||||||||  ||||| | ||| ||| ||||  ||||||||||  | ||||||||| ||| ||||||||||||    
T  564 gaatttgttggagaaaaagataataacagacaagtgtttattacgagagaaagataacatacttaatttattggaaagataaagtgtgtg 653  T

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Target: scaffold0637 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 3767 - 3863
Alignment:
Q  22 aaatatgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtga 116  Q
    ||||| ||||||||| |||||| ||||||||| | | | |||||||||||||||  ||||||||  ||||||||||| | ||| | |||||||||||    
T  3767 aaatacgaatttgttagagaaagagataataactaaaatttatttgttatgagacaaagataacatattaaatttatcggaaagagaaagtgtgtga 3863  T

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Target: scaffold0188 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 5800 - 5709
Alignment:
Q  26 atgaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataac--attaaatttattgaaaatataaagtgtgtg 115  Q
    |||||||||||||||||||||||| ||| | |||| | |||||||  |||  || |||||  ||||||||||||||||| | ||||||||||    
T  5800 atgaatttgttggagaaaaagatagtaactaacaaatgtttgttacaagagaaaaataacatattaaatttattgaaaagagaaagtgtgtg 5709  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 257207 - 257295
Alignment:
Q  28 gaatttgttggagaaaaagataataaatgacaattatttgttatgagatgaagataacat--taaatttattgaaaatataaagtgtgtg 115  Q
    ||||| |||| ||||||||||||||| || ||||| ||||||  ||||  | ||||||||  ||||||||||||||| ||||||||||||    
T  257207 gaattcgttgaagaaaaagataataactg-caattgtttgtttcgagagaaggataacatattaaatttattgaaaagataaagtgtgtg 257295  T

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