View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3640_low_51 (Length: 250)
Name: NF3640_low_51
Description: NF3640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3640_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 39499082 - 39499324
Alignment:
| Q |
8 |
acatcatcatcaatacaaccatcatcacccctaatccaaccttacctatcttcatcttcttctt----------------tttatttttactataatgta |
91 |
Q |
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| T |
39499082 |
acatcatcatcaatacaaccatcatcacccctaatccaaccttacctatcttcatcttattcttgtttttttaattttgttttatttttactataatgta |
39499181 |
T |
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| Q |
92 |
tggatgaaagaaattgaagaataatggtggggttgagtttaagtatttaaattaatgattcttgttggaaagagttggttgtgctaattcatgaagaaaa |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39499182 |
tggatgaaagaaattgaagaataatggtggggttgagtttaagtatttaaattaatgattcttgttggaaagagttggttgtgctaattcatgaagaaaa |
39499281 |
T |
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| Q |
192 |
ggagagaataaactcaacattagaaagtggtattgcttcatat |
234 |
Q |
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| T |
39499282 |
ggagagaataaactcaacattagaaagtggtattgcttcatat |
39499324 |
T |
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